1. Comparison of RT-PCR, RT-nested PCRs, and real-time PCR for diagnosis of severe fever with thrombocytopenia syndrome: a prospective study
- Author
-
Hye Won Jeong, Uh Jin Kim, Su Jin Lee, Yee Gyung Kwak, Jun-Won Seo, Seong Eun Kim, Choon Mee Kim, Seong Yeon Hwang, Hyun Ah Kim, Da Young Kim, Jian Hur, Jieun Kim, Eu Suk Kim, Sehrish Jalal, Dong-Min Kim, Sun Hee Park, Dong Sik Jung, Seungjin Lim, Sook-In Jung, Na Ra Yun, Sun Hee Lee, Jung Yeon Heo, and Young Keun Kim
- Subjects
Male ,Phlebovirus ,medicine.medical_specialty ,Severe Fever with Thrombocytopenia Syndrome ,Molecular biology ,Science ,Real-Time Polymerase Chain Reaction ,Gastroenterology ,Virus ,Article ,Internal medicine ,medicine ,Humans ,In patient ,Symptom onset ,Prospective Studies ,Prospective cohort study ,Multidisciplinary ,business.industry ,Reverse Transcriptase Polymerase Chain Reaction ,Biological techniques ,medicine.disease ,Reverse transcriptase ,Severe fever with thrombocytopenia syndrome ,Real-time polymerase chain reaction ,RNA, Viral ,Medicine ,Female ,business ,Nested polymerase chain reaction ,Follow-Up Studies - Abstract
We designed a highly sensitive reverse transcription nested polymerase chain reaction targeting the M-segment (NPCR-M) of severe fever with thrombocytopenia syndrome (SFTS) virus. NPCR-M was performed in parallel with three other referenced PCR assays QPCR-S, PCR-M, and NPCR-S to assess their clinical usefulness as routine diagnostic techniques for SFTS. In this multi-centered prospective study, 122 blood samples from 38 laboratory-confirmed SFTS patients and 85 control samples were used. The results demonstrated that QPCR-S and NPCR-S had better sensitivity rate up to 21 days after symptom onset however, the PCR-M showed poor sensitivity after 7 days of symptom onset. Our designed NPCR-M had a higher detection rate up to 40 days from symptom onset and revealed the persistence of SFTSV RNA in the early convalescent phase. No false-positive results were seen for the control samples. Additionally, NPCR-M showed positive results for a sample that initially showed negative results from other PCRs and for many other samples collected in the convalescent phase of SFTS. Our designed nested PCR is suitable for SFTSV detection in patients’ blood collected in the acute and early convalescent phase of SFTS, and shows better sensitivity and high specificity even up to 40 days after symptom onset.
- Published
- 2021