1. Genetic Architecture of Childhood Kidney and Urological Diseases in China
- Author
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Wenhao Zhou, Dongfeng Zhang, Aihua Zhang, Ruifeng Zhang, Zhengkun Xia, Duan Ma, Mo Wang, Jieqiu Zhuang, Shan Jian, Hongtao Zhu, Yuling Liu, Jialu Liu, Jinghai Li, Jia Rao, Bili Zhang, Lijun Zhao, Xiaoshan Shao, Hua Shi, Ying Shen, Fang Deng, Li Sun, Cuihua Liu, Xiaojie Gao, Ying Bao, Yihui Zhai, Xiaoyun Jiang, Feiyan Wang, Huifeng Zhang, Shuzhen Sun, Yanyan Qian, Yulong Wang, Qiu Li, Xuemei Liu, Qian Shen, Yufeng Li, Ye Fang, Xiaowen Wang, Ying Zhu, Wenyan Huang, Jian Gao, Biao Lu, Siguang Lu, Xiang Wang, Bingbing Wu, Hong Xu, Bo Zhao, Jianhua Mao, Huijun Wang, Li Yu, Haitao Bai, Mengzhun Zhao, Qing Sun, Qingshan Ma, Xiaoshan Tang, Jiaojiao Liu, Jianjiang Zhang, Xiaorong Liu, Xinhui Luo, Guohua He, Xiaohua Li, Xiqiang Dang, Jing Chen, Guomin Li, Liping Zhao, Xiaoyan Fang, Yubin Wu, Yunli Bi, Tianchao Xiang, and Mei Han
- Subjects
0301 basic medicine ,Kidney ,medicine.medical_specialty ,business.industry ,030232 urology & nephrology ,Glomerulonephritis ,Disease ,medicine.disease ,Nephropathy ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,Tubulopathy ,Internal medicine ,medicine ,business ,Nephrotic syndrome ,Exome sequencing ,Kidney disease - Abstract
Kidney disease is manifested in a wide variety of phenotypes, many of which have an important hereditary component. To delineate the genotypic and phenotypic spectrum of pediatric nephropathy, a multicenter registration system is being implemented based on the Chinese Children Genetic Kidney Disease Database (CCGKDD). In this study, all the patients with kidney and urological diseases were recruited from 2014 to 2020. Genetic analysis was conducted using exome sequencing for families with multiple affected individuals with nephropathy or clinical suspicion of a genetic kidney disease owing to early-onset or extrarenal features. The genetic diagnosis was confirmed in 883 of 2256 (39.1%) patients from 23 provinces in China. Phenotypic profiles showed that the primary diagnosis included steroid-resistant nephrotic syndrome (SRNS, 23.5%), glomerulonephritis (GN, 32.2%), congenital anomalies of the kidney and urinary tract (CAKUT, 21.2%), cystic renal disease (3.9%), renal calcinosis/stone (3.6%), tubulopathy (9.7%), and chronic kidney disease of unknown etiology (CKDu, 5.8%). The pathogenic variants of 105 monogenetic disorders were identified. Ten distinct genomic disorders were identified as pathogenic copy number variants (CNVs) in 11 patients. The diagnostic yield differed by subgroups, and was highest in those with cystic renal disease (66.3%), followed by tubulopathy (58.4%), GN (57.7%), CKDu (43.5%), SRNS (29.2%), renal calcinosis /stone (29.3%) and CAKUT (8.6%). Reverse phenotyping permitted correct identification in 40 cases with clinical reassessment and unexpected genetic conditions. We present the results of the largest cohort of children with kidney disease in China where diagnostic exome sequencing was performed. Our data demonstrate the utility of family-based exome sequencing, and indicate that the combined analysis of genotype and phenotype based on the national patient registry is pivotal to the genetic diagnosis of kidney disease.
- Published
- 2021
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