1. Circular RNA expression alterations in extracellular vesicles isolated from murine heart post ischemia/reperfusion injury
- Author
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Xinyu Ge, Qingshu Meng, Huimin Fan, Dongsheng Yuan, Xiaohui Zhou, Rulin Zhuang, Fang Lin, and Jing Liu
- Subjects
Male ,Ischemia ,Plasma protein binding ,030204 cardiovascular system & hematology ,Extracellular Vesicles ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Circular RNA ,microRNA ,medicine ,Animals ,030212 general & internal medicine ,Gene ,Sequence Analysis, RNA ,business.industry ,Myocardium ,Kinase activator activity ,RNA ,RNA, Circular ,medicine.disease ,Cell biology ,Mice, Inbred C57BL ,Reperfusion Injury ,Cardiology and Cardiovascular Medicine ,business ,Reperfusion injury - Abstract
Background Increasing studies indicated the involvement of extracellular vesicles (EVs) in cardiovascular diseases. However, the role of circular RNAs (circRNAs) in cardiac EVs (cEVs) during ischemia/reperfusion (I/R) injury remain unclear. Methods We isolated the cEVs from I/R injured hearts and performed RNA sequencing (RNA-seq) to identify the profile of circRNA in cEVs and investigated their potential roles in I/R pathological process. Results Cardiac I/R induced a significantly elevated release of EVs in heart within 24 h. RNA-seq of cEVs identified 185 significantly differentially expressed (DE) circRNAs including 119 down-regulated and 66 up-regulated circRNAs in I/R group compared with the sham. GO and pathway analysis showed that these DE-circRNAs were associated with protein binding and kinase activator activity and mainly involved in the metabolic process. The circRNA-miRNA analysis exhibited the broad potentials of the DE-circRNAs to regulate target genes by acting on the miRNAs. Conclusions These findings revealed for the first time the specific expression pattern of circRNAs in EVs derived from sham and I/R heart tissues and provided some potential targets and pathways involving in I/R injury which may provide important evidences for the role of both circRNA and EVs in the pathology of cardiac I/R.
- Published
- 2019