1. Identification of a novel genetic locus associated with immune-mediated thrombotic thrombocytopenic purpura
- Author
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Matthew J. Stubbs, Adam P. Levine, Daniel P. Gale, Pascale Poullin, Mari Thomas, Horia Stanescu, Mike Hubank, Lionel Galicier, Stephanie Dufek, Agnès Veyradier, Ygal Benhamou, Chris Cheshire, Marie Scully, Robert Kleta, Vaksha Patel, John O. Connolly, and Paul Coppo
- Subjects
0301 basic medicine ,Purpura, Thrombocytopenic, Idiopathic ,Purpura, Thrombotic Thrombocytopenic ,Thrombotic thrombocytopenic purpura ,ADAMTS13 Protein ,Hematology ,030204 cardiovascular system & hematology ,Biology ,medicine.disease ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Immune system ,Genetic Loci ,Glucosyltransferases ,Immunology ,medicine ,Humans ,Identification (biology) ,Genome-Wide Association Study - Abstract
Immune thrombotic thrombocytopenic purpura (iTTP) is an ultra-rare, life-threatening disorder, mediated through severe ADAMTS13 deficiency causing multi-system micro-thrombi formation, and has specific human leukocyte antigen associations. We undertook a large genome-wide association study to investigate additional genetically distinct associations in iTTP. We compared two iTTP patient cohorts with controls, following standardized genome-wide quality control procedures for single-nucleotide polymorphisms and imputed HLA types. Associations were functionally investigated using expression quantitative trait loci (eQTL), and motif binding prediction software. Independent associations consistent with previous findings in iTTP were detected at the HLA locus and in addition a novel association was detected on chromosome 3 (rs9884090, P=5.22x10-10, odds ratio 0.40) in the UK discovery cohort. Meta-analysis, including the French replication cohort, strengthened the associations. The haploblock containing rs9884090 is associated with reduced protein O-glycosyltransferase 1 (POGLUT1) expression (eQTL P
- Published
- 2021
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