1. Global Mirna Expression Of Bone Marrow Mesenchymal Stem/Stromal Cells Derived From Fanconi Anemia Patients
- Author
-
Melike Tombaz, Aysen Gunel-Ozcan, Duygu Uckan-Cetinkaya, Mustafa Keles, Ozge Burcu Sahan, Ilgin Cagnan, Ozlen Konu, Ayse Gokce Keskus, Fatima Aerts-Kaya, Keskus, Ayse Gokce, Tombaz, Melike, and Konu, Ozlen
- Subjects
Cancer Research ,Stromal cell ,Mesenchymal stem/stromal cells ,Mesenchymal stem cell ,Cell Biology ,Biology ,medicine.disease ,Non-coding RNAs ,Transplantation ,Haematopoiesis ,medicine.anatomical_structure ,Fanconi anemia ,medicine ,Cancer research ,Bone marrow ,Stem cell ,Tissue homeostasis ,miRNA - Abstract
Fanconi anemia (FA) is a rare genetic disorder characterized by genomic instability, developmental defects, and bone marrow (BM) failure. Hematopoietic stem cells (HSCs) in BM interact with the mesenchymal stem/stromal cells (MSCs); and this partly sustains the tissue homeostasis. MicroRNAs (miRNAs) can play a critical role during these interactions possibly via paracrine mechanisms. This is the first study addressing the miRNA profile of FA BM-MSCs obtained before and after BM transplantation (preBMT and postBMT, respectively). Non-coding RNA expression profiling and quality control analyses were performed in Donors (n = 13), FA preBMT (n = 11), and FA postBMT (n = 6) BM-MSCs using GeneChip miRNA 2.0 Array. Six Donor-FA preBMT pairs were used to identify a differentially expressed miRNA expression signature containing 50 miRNAs, which exhibited a strong correlation with the signature obtained from unpaired samples. Five miRNAs (hsa-miR-146a-5p, hsa-miR-148b-3p, hsa-miR-187-3p, hsa-miR-196b-5p, and hsa-miR-25-3p) significantly downregulated in both the paired and unpaired analyses were used to generate the BM-MSCs' miRNA-BM mononuclear mRNA networks upon integration of a public dataset (GSE16334; studying Donor versus FA samples). Functionally enriched KEGG pathways included cellular senescence, miRNAs, and pathways in cancer. Here, we showed that hsa-miR-146a-5p and hsa-miR-874-3p were rescued upon BMT (n = 3 triplets). The decrease in miR-146a-5p was also validated using RT-qPCR and emerged as a strong candidate as a modulator of BM mRNAs in FA patients.
- Published
- 2022