26 results on '"Tramontan, A"'
Search Results
2. Cardiovascular outcomes after initiating GLP-1 receptor agonist or basal insulin for the routine treatment of type 2 diabetes: a region-wide retrospective study
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Barbara Di Camillo, Gian Paolo Fadini, Lara Tramontan, Angelo Avogaro, Giovanni Sparacino, and Enrico Longato
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Male ,Comparative Effectiveness Research ,medicine.medical_specialty ,Time Factors ,Databases, Factual ,Endocrinology, Diabetes and Metabolism ,Population ,Effectiveness ,Type 2 diabetes ,Guidelines ,Observational ,Pharmacotherapy ,Real world ,Incretins ,Glucagon-Like Peptide-1 Receptor ,Internal medicine ,Diabetes mellitus ,medicine ,Clinical endpoint ,Humans ,Hypoglycemic Agents ,Insulin ,Diseases of the circulatory (Cardiovascular) system ,Longitudinal Studies ,education ,Adverse effect ,Aged ,Retrospective Studies ,Original Investigation ,Aged, 80 and over ,education.field_of_study ,business.industry ,Retrospective cohort study ,Middle Aged ,medicine.disease ,Treatment Outcome ,Diabetes Mellitus, Type 2 ,Italy ,Cardiovascular Diseases ,RC666-701 ,Cohort ,Propensity score matching ,Female ,Cardiology and Cardiovascular Medicine ,business ,Administrative Claims, Healthcare - Abstract
Aim We aimed to compare cardiovascular outcomes of patients with type 2 diabetes (T2D) who initiated GLP-1 receptor agonists (GLP-1RA) or basal insulin (BI) under routine care. Methods We accessed the administrative claims database of the Veneto Region (Italy) to identify new users of GLP-1RA or BI in 2014–2018. Propensity score matching (PSM) was implemented to obtain two cohorts of patients with superimposable characteristics. The primary endpoint was the 3-point major adverse cardiovascular events (3P-MACE). Secondary endpoints included 3P-MACE components, hospitalization for heart failure, revascularizations, and adverse events. Results From a background population of 5,242,201 citizens, 330,193 were identified as having diabetes. PSM produced two very well matched cohorts of 4063 patients each, who initiated GLP-1RA or BI after an average of 2.5 other diabetes drug classes. Patients were 63-year-old and only 15% had a baseline history of cardiovascular disease. During a median follow-up of 24 months in the intention-to-treat analysis, 3P-MACE occurred less frequently in the GLP-1RA cohort (HR versus BI 0.59; 95% CI 0.50–0.71; p Conclusions Patients with T2D who initiated a GLP-1RA experienced far better cardiovascular outcomes than did matched patients who initiated a BI in the same healthcare system. These finding supports prioritization of GLP-1RA as the first injectable regimen for the management of T2D.
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- 2021
3. ADVANCE system testing: Can safety studies be conducted using electronic healthcare data? An example using pertussis vaccination
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Giorgia Danieli, Caitlin Dodd, Consuelo Huerta-Alvarez, Vincent Bauchau, Klara Berencsi, Chris McGee, Tom De Smedt, Talita Duarte-Salles, Lara Tramontan, Ana Correa, Daniel Weibel, Hanne-Dorthe Emborg, François Haguinet, Gino Picelli, Kaatje Bollaerts, Olivia Mahaux, Lina Titievsky, Elisa Martín-Merino, Miriam C. J. M. Sturkenboom, and Medical Informatics
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medicine.medical_specialty ,Whooping Cough ,Pertussis vaccination ,030231 tropical medicine ,Primary care ,Feasibility study ,03 medical and health sciences ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Internal medicine ,medicine ,Electronic Health Records ,Humans ,030212 general & internal medicine ,Child ,Healthcare data ,Children ,Pertussis Vaccine ,General Veterinary ,General Immunology and Microbiology ,Safety studies ,business.industry ,Vaccination ,Public Health, Environmental and Occupational Health ,Infant ,Europe ,Pertussis-related risk ,Infectious Diseases ,Italy ,Spain ,Database study ,Molecular Medicine ,Population study ,medicine.symptom ,business ,Delivery of Health Care ,Somnolence ,Case series - Abstract
Introduction: The Accelerated Development of Vaccine benefit-risk Collaboration in Europe (ADVANCE) public-private collaboration, aimed to develop and test a system for rapid benefit-risk monitoring of vaccines using healthcare databases in Europe. The objective of this proof-of-concept (POC) study was to test the feasibility of the ADVANCE system to generate incidence rates (IRs) per 1000 person-years and incidence rate ratios (IRRs) for risks associated with whole cell- (wP) and acellular- (aP) pertussis vaccines, occurring in event-specific risk windows in children prior to their pre-school-entry booster. Methods: The study population comprised almost 5.1 million children aged 1 month to
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- 2020
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4. ADVANCE system testing: Benefit-risk analysis of a marketed vaccine using multi-criteria decision analysis and individual-level state transition modelling
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Hanne-Dorthe Emborg, Vincent Bauchau, Elisa Martín-Merino, Miriam C. J. M. Sturkenboom, Lara Tramontan, Kaatje Bollaerts, Daniel Weibel, Talita Duarte-Salles, Consuelo Huerta, Tom De Smedt, Gino Picelli, Edouard Ledent, Giorgia Danieli, and Medical Informatics
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medicine.medical_specialty ,Whooping Cough ,030231 tropical medicine ,Immunization, Secondary ,Risk Assessment ,Decision Support Techniques ,03 medical and health sciences ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Environmental health ,Epidemiology ,Humans ,Medicine ,030212 general & internal medicine ,Child ,Pertussis Vaccine ,Booster (rocketry) ,General Veterinary ,General Immunology and Microbiology ,business.industry ,Incidence (epidemiology) ,Public Health, Environmental and Occupational Health ,Benefit risk analysis ,Multiple-criteria decision analysis ,Europe ,Infectious Diseases ,Italy ,Spain ,Relative risk ,Cohort ,Molecular Medicine ,business ,Decision analysis - Abstract
Background: The Accelerated Development of VAccine beNefit-risk Collaboration in Europe (ADVANCE) is a public-private collaboration aiming to develop and test a system for rapid benefit-risk (B/R) monitoring of vaccines using electronic health record (eHR) databases in Europe. Proof-of-concept studies were designed to assess the proposed processes and system for generating the required evidence to perform B/R assessment and near-real time monitoring of vaccines. We aimed to test B/R methodologies for vaccines, using the comparison of the B/R profiles of whole-cell (wP) and acellular pertussis (aP) vaccine formulations in children as an example. Methods: We used multi-criteria decision analysis (MCDA) to structure the B/R assessment combined with individual-level state transition modelling to build the B/R effects table. In the state transition model, we simulated the number of events in two hypothetical cohorts of 1 million children followed from first pertussis dose till pre-school-entry booster (or six years of age, whichever occurred first), with one cohort receiving wP, and the other aP. The benefits were reductions in pertussis incidence and complications. The risks were increased incidences of febrile convulsions, fever, hypotonic-hyporesponsive episodes, injection-site reactions and persistent crying. Most model parameters were informed by estimates (coverage, background incidences, relative risks) from eHR databases from Denmark (SSI), Spain (BIFAP and SIDIAP), Italy (Pedianet) and the UK (RCGP-RSC and THIN). Preferences were elicited from clinical and epidemiological experts. Results: Using state transition modelling to build the B/R effects table facilitated the comparison of different vaccine effects (e.g. immediate vaccine risks vs long-term vaccine benefits). Estimates from eHR databases could be used to inform the simulation model. The model results could be easily combined with preference weights to obtain B/R scores. Conclusion: Existing B/R methodology, modelling and estimates from eHR databases can be successfully used for B/R assessment of vaccines.
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- 2020
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5. Cardiovascular effectiveness of human-based vs. exendin-based glucagon like peptide-1 receptor agonists: a retrospective study in patients with type 2 diabetes
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Lara Tramontan, Giovanni Sparacino, Angelo Avogaro, Gian Paolo Fadini, Enrico Longato, and Barbara Di Camillo
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Male ,endocrine system ,medicine.medical_specialty ,Epidemiology ,Myocardial Infarction ,Effectiveness ,Type 2 diabetes ,030204 cardiovascular system & hematology ,Glucagon-Like Peptide-1 Receptor ,03 medical and health sciences ,0302 clinical medicine ,Glucagon-Like Peptide 1 ,Internal medicine ,Diabetes mellitus ,medicine ,Humans ,Hypoglycemic Agents ,030212 general & internal medicine ,Myocardial infarction ,Retrospective Studies ,Cardiovascular risk ,Pharmacoepidemiology ,Real-world ,business.industry ,digestive, oral, and skin physiology ,Hazard ratio ,Retrospective cohort study ,Middle Aged ,medicine.disease ,Diabetes Mellitus, Type 2 ,Heart failure ,Propensity score matching ,Female ,Cardiology and Cardiovascular Medicine ,business ,Mace - Abstract
Aims Glucagon like peptide-1 (GLP-1) receptor agonists (GLP-1RA) are effective to control type 2 diabetes (T2Ds) and can protect from adverse cardiovascular outcomes. GLP-1RA are based on the human GLP-1 or the exendin-4 sequence. We compared cardiovascular outcomes of patients with T2D who received human-based or exendin-based GLP-1RA in routine clinical practice. Methods and results We performed a retrospective study on the administrative database of T2D patients from the Veneto Region (North-East Italy). We identified patients who initiated a human-based or exendin-based GLP-1RA from 2011 to 2018. The primary outcome was occurrence of major adverse cardiovascular events (MACE). Secondary outcomes were individual MACE components, revascularization, hospitalization for heart failure, or for cardiovascular causes. From 330 193 patients with diabetes, 6620 were new users of GLP-1RA. After propensity score matching, we analysed 1098 patients in each group, who were on average 61 years old, 59.5% males, 13% with established cardiovascular disease, had an estimated diabetes duration of 8.4 years, and a baseline HbA1c of 7.9%. During a median follow-up of 18 months, patients treated with human-based GLP-1RA as compared to those treated with exendin-based GLP-1RA, showed lower rates of MACE [hazard ratio 0.61; 95% confidence interval (CI) 0.39–0.95], myocardial infarction (0.51; 95% CI 0.28–0.94), and hospitalization for cardiovascular causes (0.66; 95% CI 0.47–0.92). Conclusion We observed better cardiovascular outcomes among patients treated with human-based vs. exendin-based GLP-1RA under routine care. In the absence of comparative trials and in view of the limitations of retrospective studies, this finding provides a moderate level of evidence to guide clinical decision.
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- 2020
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6. Exposure to dipeptidyl‐peptidase‐4 inhibitors and<scp>COVID</scp>‐19 among people with type 2 diabetes: A case‐control study
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Lara Tramontan, Gian Paolo Fadini, Roberto Vettor, Mario Luca Morieri, Andrea Vianello, Enrico Longato, Giovanni Sparacino, Giacomo Voltan, Daniele Falaguasta, Barbara Di Camillo, Silvia Tresso, Anna Maria Cattelan, Silvia Pinelli, Giorgia Costantini, Angelo Avogaro, Paola Fioretto, Elisa Selmin, and Benedetta Maria Bonora
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Male ,medicine.medical_specialty ,animal structures ,Endocrinology, Diabetes and Metabolism ,030209 endocrinology & metabolism ,Type 2 diabetes ,030204 cardiovascular system & hematology ,Disease Outbreaks ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Internal medicine ,Epidemiology ,Internal Medicine ,Humans ,Medicine ,Outpatient clinic ,Pandemics ,Dipeptidyl peptidase-4 ,Aged ,Retrospective Studies ,Aged, 80 and over ,Dipeptidyl-Peptidase IV Inhibitors ,SARS-CoV-2 ,business.industry ,Brief Report ,Case-control study ,COVID-19 ,Middle Aged ,Prognosis ,medicine.disease ,Hospitalization ,Clinical trial ,Pneumonia ,Diabetes Mellitus, Type 2 ,Italy ,Case-Control Studies ,Etiology ,Female ,Brief Reports ,business - Abstract
Because other coronaviruses enter the cells by binding to dipeptidyl-peptidase-4 (DPP-4), it has been speculated that DPP-4 inhibitors (DPP-4is) may exert an activity against severe acute respiratory syndrome coronavirus 2. In the absence of clinical trial results, we analysed epidemiological data to support or discard such a hypothesis. We retrieved information on exposure to DPP-4is among patients with type 2 diabetes (T2D) hospitalized for COVID-19 at an outbreak hospital in Italy. As a reference, we retrieved information on exposure to DPP-4is among matched patients with T2D in the same region. Of 403 hospitalized COVID-19 patients, 85 had T2D. The rate of exposure to DPP-4is was similar between T2D patients with COVID-19 (10.6%) and 14 857 matched patients in the region (8.8%), or 793 matched patients in the local outpatient clinic (15.4%), 8284 matched patients hospitalized for other reasons (8.5%), and when comparing 71 patients hospitalized for COVID-19 pneumonia (11.3%) with 351 matched patients with pneumonia of another aetiology (10.3%). T2D patients with COVID-19 who were on DPP-4is had a similar disease outcome as those who were not. In summary, we found no evidence that DPP-4is might affect hospitalization for COVID-19.
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- 2020
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7. Identifying Cases of Type 2 Diabetes in Heterogeneous Data Sources: Strategy from the EMIF Project.
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Giuseppe Roberto, Ingrid Leal, Naveed Sattar, A Katrina Loomis, Paul Avillach, Peter Egger, Rients van Wijngaarden, David Ansell, Sulev Reisberg, Mari-Liis Tammesoo, Helene Alavere, Alessandro Pasqua, Lars Pedersen, James Cunningham, Lara Tramontan, Miguel A Mayer, Ron Herings, Preciosa Coloma, Francesco Lapi, Miriam Sturkenboom, Johan van der Lei, Martijn J Schuemie, Peter Rijnbeek, and Rosa Gini
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Medicine ,Science - Abstract
Due to the heterogeneity of existing European sources of observational healthcare data, data source-tailored choices are needed to execute multi-data source, multi-national epidemiological studies. This makes transparent documentation paramount. In this proof-of-concept study, a novel standard data derivation procedure was tested in a set of heterogeneous data sources. Identification of subjects with type 2 diabetes (T2DM) was the test case. We included three primary care data sources (PCDs), three record linkage of administrative and/or registry data sources (RLDs), one hospital and one biobank. Overall, data from 12 million subjects from six European countries were extracted. Based on a shared event definition, sixteeen standard algorithms (components) useful to identify T2DM cases were generated through a top-down/bottom-up iterative approach. Each component was based on one single data domain among diagnoses, drugs, diagnostic test utilization and laboratory results. Diagnoses-based components were subclassified considering the healthcare setting (primary, secondary, inpatient care). The Unified Medical Language System was used for semantic harmonization within data domains. Individual components were extracted and proportion of population identified was compared across data sources. Drug-based components performed similarly in RLDs and PCDs, unlike diagnoses-based components. Using components as building blocks, logical combinations with AND, OR, AND NOT were tested and local experts recommended their preferred data source-tailored combination. The population identified per data sources by resulting algorithms varied from 3.5% to 15.7%, however, age-specific results were fairly comparable. The impact of individual components was assessed: diagnoses-based components identified the majority of cases in PCDs (93-100%), while drug-based components were the main contributors in RLDs (81-100%). The proposed data derivation procedure allowed the generation of data source-tailored case-finding algorithms in a standardized fashion, facilitated transparent documentation of the process and benchmarking of data sources, and provided bases for interpretation of possible inter-data source inconsistency of findings in future studies.
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- 2016
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8. A Deep Learning Approach to Predict Diabetes' Cardiovascular Complications From Administrative Claims
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Gian Paolo Fadini, Angelo Avogaro, Enrico Longato, Barbara Di Camillo, Giovanni Sparacino, and Lara Tramontan
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medicine.medical_specialty ,neural network ,MEDLINE ,Myocardial Infarction ,Pharmacy ,Disease ,Diabetes Complications ,Deep Learning ,Health Information Management ,cardiovascular disease ,Risk Factors ,Health care ,eHealth ,Diabetes Mellitus ,Medicine ,Humans ,Electrical and Electronic Engineering ,Disease management (health) ,Intensive care medicine ,Stroke ,risk ,business.industry ,Diabetes ,Statistics ,Data models ,Indexes ,medicine.disease ,Computer Science Applications ,Cardiovascular Diseases ,Censoring (clinical trials) ,Medical services ,administrative claims ,Cardiovascular diseases ,Deep learning ,deep learning ,business ,Biotechnology - Abstract
People with diabetes require lifelong access to healthcare services to delay the onset of complications. Their disease management processes generate great volumes of data across several domains, from clinical to administrative. Difficulties in accessing and processing these data hinder their secondary use in an institutional setting, even for highly desirable applications, such as the prediction of cardiovascular disease, the main driver of excess mortality in diabetes. Hence, in the present work, we propose a deep learning model for the prediction of major adverse cardiovascular events (MACE), developed and validated using the administrative claims of 214,676 diabetic patients of the Veneto region, in North East Italy. Specifically, we use a year of pharmacy and hospitalisation claims, together with basic patient's information, to predict the 4P-MACE composite endpoint, i.e., the first occurrence of death, heart failure, myocardial infarction, or stroke, with a variable prediction horizon of 1 to 5 years. Adapting to the time-to-event nature of this task, we cast our problem as a multi-outcome (4P-MACE and components), multi-label (1 to 5 years) classification task with a custom loss to account for the effect of censoring. Our model, purposefully specified to minimise data preparation costs, exhibits satisfactory performance in predicting 4P-MACE at all prediction horizons: AUROC from 0.812 (C.I.: 0.797 – 0.827) to 0.792 (C.I.: 0.781 – 0.802); C-index from 0.802 (C.I.: 0.788 – 0.816) to 0.770 (C.I.: 0.761 – 0.779). Components’ prediction performance is also adequate, ranging from death's 0.877 1-year AUROC to stroke's 0.689 5-year AUROC.
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- 2021
9. Outcomes of patients with type 2 diabetes treated with SGLT-2 inhibitors versus DPP-4 inhibitors. An Italian real-world study in the context of other observational studies
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Gian Paolo Fadini, Benedetta Maria Bonora, Angelo Avogaro, Giovanni Sparacino, Enrico Longato, Lara Tramontan, and Barbara Di Camillo
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medicine.medical_specialty ,Epidemiology ,Endocrinology, Diabetes and Metabolism ,Context (language use) ,Type 2 diabetes ,Guidelines ,Endocrinology ,Internal medicine ,Diabetes mellitus ,Internal Medicine ,medicine ,Diabetes Mellitus ,Humans ,Hypoglycemic Agents ,Myocardial infarction ,Sodium-Glucose Transporter 2 Inhibitors ,Real-world evidence ,Dipeptidyl-Peptidase IV Inhibitors ,business.industry ,Cardiovascular disease ,Italy ,Middle Aged ,Cardiovascular Diseases ,Diabetes Mellitus, Type 2 ,General Medicine ,medicine.disease ,Heart failure ,Propensity score matching ,Observational study ,business ,Type 2 - Abstract
Aims We compared cardiovascular outcomes of patients with type 2 diabetes (T2D) receiving sodium glucose cotransporter-2 inhibitors (SGLT2i) or dipeptidyl peptidase-4 inhibitors (DPP4i) under routine care. Methods From an administrative claims database of >5.2M citizen, we identified patients with T2D who initiated SGLT2i or DPP4i from 2014 to 2018. Patients were matched by propensity scores. The primary outcome was the 3-point major adverse cardiovascular events (3P-MACE). Results After matching, we included 3216 patients/group, with mean age of 63 years, diabetes duration of 8.7 years, and 20% had cardiovascular disease. During a median follow-up of 18 months, the rate of 3P-MACE was lower among patients who initiated SGLT2i versus DPP4i (HR 0.74; 95 %C.I. 0.58–0.94). Initiators of SGLT2i also showed significantly lower rates of myocardial infarction (HR 0.75; 95 %C.I. 0.56–1.00), hospitalization for heart failure (HR 0.44; 95 %C.I. 0.25–0.95) or cardiovascular causes (HR 0.72; 95 %C.I. 0.60–0.87), and all-cause death (HR 0.49; 95 %C.I. 0.25–0.95). Renal failure was less common with SGLT2i than with DPP4i. Results were consistent to those obtained in a meta-analysis of 10 observational studies on ~1.5M patients. Conclusions Patients with T2D who initiated SGLT2i under routine care had better cardio-renal outcomes and lower all-cause mortality than similar patients who initiated DPP4i.
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- 2021
10. Advance system testing:Vaccine benefit studies using multi-country electronic health data – The example of pertussis vaccination
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Maria A. J. de Ridder, Kaatje Bollaerts, Ulrich Heininger, Chris McGee, Consuelo Huerta-Alvarez, Nicoline A.T. van der Maas, Gino Picelli, Simon de Lusignan, Klara Berencsi, Miriam C. J. M. Sturkenboom, Lisen Arnheim-Dahlström, Toon Braeye, Giorgia Danieli, Elisa Martín-Merino, Hanne-Dorthe Emborg, Ana Correa, Talita Duarte-Salles, Myint Tin Tin Htar, Lara Tramontan, Daniel Weibel, and Medical Informatics
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Pediatrics ,medicine.medical_specialty ,Whooping Cough ,030231 tropical medicine ,Pertussis vaccination ,Feasibility study ,Health data ,03 medical and health sciences ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Medicine ,Electronic Health Records ,Humans ,Pertussis-related complications ,030212 general & internal medicine ,Child ,Children ,Retrospective Studies ,Pertussis Vaccine ,General Veterinary ,General Immunology and Microbiology ,business.industry ,Vaccination ,Public Health, Environmental and Occupational Health ,Infant ,Retrospective cohort study ,medicine.disease ,Pertussis incidence ,Europe ,Pneumonia ,Infectious Diseases ,Italy ,Spain ,Relative risk ,Cohort ,Molecular Medicine ,Pertussis vaccine ,Database study ,business ,medicine.drug - Abstract
The Accelerated Development of VAccine benefit-risk Collaboration in Europe (ADVANCE), a public-private consortium, implemented and tested a distributed network system for the generation of evidence on the benefits-risks of marketed vaccines in Europe. We tested the system by estimating the incidence rate (IR) of pertussis and pertussis-related complications in children vaccinated with acellular (aP) and whole-cell (wP) pertussis vaccine. Data from seven electronic databases from four countries (Denmark: AUH and SSI, Spain: SIDIAP and BIFAP, UK: THIN and RCGP RSC and Italy: Pedianet) were included in a retrospective cohort analysis. Exposure was defined as any pertussis vaccination (aP or wP). The follow-up time started 14 days after the first dose. Children who had received any pertussis vaccine from January 1990 to December 2015 were included (those who switched type, or had unknown type were excluded). The outcomes of interest were confirmed or suspected pertussis and pertussis-related pneumonia and generalised convulsions within one month of pertussis diagnosis and death within three months of pertussis diagnosis. The cohort comprised 2,886,367 children ≤5 years of age. Data on wP and aP vaccination were available in three and seven databases, respectively. The IRs (per 100,000 person-years) for pertussis varied largely and ranged between 0.15 (95% CI: 0.12; 0.19) and 1.15 (95% CI: 1.07; 1.23), and the trends over time was consistent with those observed from national surveillance databases for confirmed pertussis. The pertussis IRs decreased as the number of wP and aP vaccine doses increased. Pertussis-related complications were rare (89 pneumonia, 7 generalised convulsions and no deaths) and their relative risk (vs. non-pertussis) could not be reliably estimated. The study demonstrated the feasibility of the ADVANCE system to estimate the change in pertussis IRs following pertussis vaccination. Larger sample sizes would provide additional power to compare the risk for complications between children with and without pertussis. The feasibility of vaccine-type specific effectiveness studies may be considered in the future.
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- 2020
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11. ADVANCE database characterisation and fit for purpose assessment for multi-country studies on the coverage, benefits and risks of pertussis vaccinations
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Caitlin Dodd, Johnny Kahlert, Rosa Gini, Lara Tramontan, Giuseppe Roberto, Simon de Lusignan, Lina Titievsky, Miriam C. J. M. Sturkenboom, Marius Gheorghe, Daniel Weibel, Toon Braeye, Hanne Dorthe Emborg, Chris McGee, Consuelo Huerta-Alvarez, Talita Duarte-Salles, Giorgia Danieli, Elisa Martín-Merino, Lieke van der Aa, Gino Picelli, Marco Villa, and Medical Informatics
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Vaccination Coverage ,Whooping Cough ,030231 tropical medicine ,Population ,computer.software_genre ,Risk Assessment ,Big data ,03 medical and health sciences ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Seizures ,Health care ,Humans ,Medicine ,030212 general & internal medicine ,Medical diagnosis ,education ,Pertussis Vaccine ,education.field_of_study ,Electronic health data ,General Veterinary ,General Immunology and Microbiology ,Database ,business.industry ,Vaccination ,Public Health, Environmental and Occupational Health ,Infant ,Europe ,Infectious Diseases ,Fit-for-purpose ,Real world evidence ,Molecular Medicine ,Pertussis vaccine ,Diagnosis code ,business ,computer ,Record linkage ,medicine.drug ,Multi country - Abstract
Introduction The public-private ADVANCE consortium (Accelerated development of vaccine benefit-risk collaboration in Europe) aimed to assess if electronic healthcare databases can provide fit-for purpose data for collaborative, distributed studies and monitoring of vaccine coverage, benefits and risks of vaccines. Objective To evaluate if European healthcare databases can be used to estimate vaccine coverage, benefit and/or risk using pertussis-containing vaccines as an example. Methods Characterisation was conducted using open-source Java-based (Jerboa) software and R scripts. We obtained: (i) The general characteristics of the database and data source (meta-data) and (ii) a detailed description of the database population (size, representatively of age/sex of national population, rounding of birth dates, delay between birth and database entry), vaccinations (number of vaccine doses, recording of doses, pattern of doses by age and coverage) and events of interest (diagnosis codes, incidence rates). A total of nine databases (primary care, regional/national record linkage) provided data on events (pertussis, pneumonia, death, fever, convulsions, injection site reactions, hypotonic hypo-responsive episode, persistent crying) and vaccines (acellular pertussis and whole cell pertussis) related to the pertussis proof of concept studies. Results The databases contained data for a total population of 44 million individuals. Seven databases had recorded doses of vaccines. The pertussis coverage estimates were similar to those reported by the World Health Organisation (WHO). Incidence rates of events were comparable in magnitude and age-distribution between databases with the same characteristics. Several conditions (persistent crying and somnolence) were not captured by the databases for which outcomes were restricted to hospital discharge diagnoses. Conclusion The database characterisation programs and workflows allowed for an efficient, transparent and standardised description and verification of electronic healthcare databases which may participate in pertussis vaccine coverage, benefit and risk studies. This approach is ready to be used for other vaccines/events to create readiness for participation in other vaccine related studies.
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- 2020
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12. Author response for 'Exposure to <scp>DPP</scp> ‐4 inhibitors and risk of pneumonia among people with type 2 diabetes. Retrospective cohort study and meta‐analysis'
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Mario Luca Morieri, Giovanni Sparacino, Enrico Longato, Angelo Avogaro, Benedetta Maria Bonora, Lara Tramontan, Gian Paolo Fadini, and Barbara Di Camilo
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medicine.medical_specialty ,Pneumonia ,business.industry ,DPP-4 Inhibitors ,Meta-analysis ,Internal medicine ,medicine ,Retrospective cohort study ,Type 2 diabetes ,medicine.disease ,business - Published
- 2020
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13. Better cardiovascular outcomes of type 2 diabetic patients treated with GLP-1 receptor agonists versus DPP-4 inhibitors in clinical practice
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Angelo Avogaro, Giovanni Sparacino, Gian Paolo Fadini, Enrico Longato, Lara Tramontan, and Barbara Di Camillo
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Male ,lcsh:Diseases of the circulatory (Cardiovascular) system ,Time Factors ,Databases, Factual ,Epidemiology ,Endocrinology, Diabetes and Metabolism ,Type 2 diabetes ,Drug therapy ,Observational ,Registry, outcome ,Aged ,Cardiovascular Diseases ,Cause of Death ,Diabetes Mellitus, Type 2 ,Dipeptidyl-Peptidase IV Inhibitors ,Female ,Glucagon-Like Peptide-1 Receptor ,Humans ,Incretins ,Italy ,Middle Aged ,Patient Admission ,Protective Factors ,Retrospective Studies ,Risk Assessment ,Risk Factors ,Treatment Outcome ,Myocardial infarction ,Stroke ,Original Investigation ,education.field_of_study ,outcome ,Cardiology and Cardiovascular Medicine ,Type 2 ,Registry ,medicine.medical_specialty ,Population ,Lower risk ,Databases ,Internal medicine ,Diabetes mellitus ,Diabetes Mellitus ,medicine ,education ,Factual ,business.industry ,medicine.disease ,lcsh:RC666-701 ,Heart failure ,Propensity score matching ,business - Abstract
Background Cardiovascular outcome trials in high-risk patients showed that some GLP-1 receptor agonists (GLP-1RA), but not dipeptidyl-peptidase-4 inhibitors (DPP-4i), can prevent cardiovascular events in type 2 diabetes (T2D). Since no trial has directly compared these two classes of drugs, we performed a comparative outcome analysis using real-world data. Methods From a database of ~ 5 million people from North-East Italy, we retrospectively identified initiators of GLP-1RA or DPP-4i from 2011 to 2018. We obtained two balanced cohorts by 1:1 propensity score matching. The primary outcome was the 3-point major adverse cardiovascular events (3P-MACE; a composite of death, myocardial infarction, or stroke). 3P-MACE components and hospitalization for heart failure were secondary outcomes. Results From 330,193 individuals with T2D, we extracted two matched cohorts of 2807 GLP-1RA and 2807 DPP-4i initiators, followed for a median of 18 months. On average, patients were 63 years old, 60% male; 15% had pre-existing cardiovascular disease. The rate of 3P-MACE was lower in patients treated with GLP-1RA compared to DPP4i (23.5 vs. 34.9 events per 1000 person-years; HR: 0.67; 95% C.I. 0.53–0.86; p = 0.002). Rates of myocardial infarction (HR 0.67; 95% C.I. 0.50–0.91; p = 0.011) and all-cause death (HR 0.58; 95% C.I. 0.35–0.96; p = 0.034) were lower among GLP-1RA initiators. The as-treated and intention-to-treat approaches yielded similar results. Conclusions Patients initiating a GLP-1RA in clinical practice had better cardiovascular outcomes than similar patients who initiated a DPP-4i. These data strongly confirm findings from cardiovascular outcome trials in a lower risk population.
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- 2020
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14. Author response for 'Exposure to <scp>DPP</scp> ‐4 inhibitors and <scp>COVID</scp> ‐19 among people with type 2 diabetes. A case–control study'
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Enrico Longato, Andrea Vianello, Mario Luca Morieri, Benedetta Maria Bonora, Roberto Vettor, Angelo Avogaro, Silvia Tresso, Elisa Selmin, Gian Paolo Fadini, Giacomo Voltan, Giovanni Sparacino, Daniele Falaguasta, Paola Fioretto, Anna Maria Cattelan, Silvia Pinelli, Giorgia Costantini, Barbara Di Camillo, and Lara Tramontan
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Oncology ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,business.industry ,Internal medicine ,DPP-4 Inhibitors ,Case-control study ,medicine ,Type 2 diabetes ,medicine.disease ,business - Published
- 2020
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15. Quantifying outcome misclassification in multi-database studies: The case study of pertussis in the ADVANCE project
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Gianfranco Spiteri, Rosa Gini, Lara Tramontan, Consuelo Huerta-Alvarez, Jorgen Bauwens, Gino Picelli, Daniel Weibel, Chris McGee, Emmanouela Sdona, Nicoline A.T. van der Maas, Miriam C. J. M. Sturkenboom, Claudia Bartolini, Benedikt F.H. Becker, Talita Duarte-Salles, Giorgia Danieli, Sonja Gandhi-Banga, Caitlin Dodd, Charlotte Switzer, Kaatje Bollaerts, Giuseppe Roberto, Ana Correa, Elisa Martín-Merino, and Medical Informatics
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Adolescent ,Databases, Factual ,Whooping Cough ,030231 tropical medicine ,Primary care ,computer.software_genre ,03 medical and health sciences ,0302 clinical medicine ,Chart review ,False positive paradox ,Medicine ,Electronic Health Records ,Humans ,030212 general & internal medicine ,Medical diagnosis ,Child ,Pertussis Vaccine ,Disease surveillance ,General Veterinary ,General Immunology and Microbiology ,Database ,business.industry ,Public Health, Environmental and Occupational Health ,Infant, Newborn ,Infant ,Predictive value ,Outcome (probability) ,Europe ,Infectious Diseases ,Italy ,Spain ,Child, Preschool ,Molecular Medicine ,business ,computer - Abstract
Background: The Accelerated Development of VAccine beNefit-risk Collaboration in Europe (ADVANCE) is a public-private collaboration aiming to develop and test a system for rapid benefit-risk (B/R) monitoring of vaccines using European healthcare databases. Event misclassification can result in biased estimates. Using different algorithms for identifying cases of Bordetella pertussis (BorPer) infection as a test case, we aimed to describe a strategy to quantify event misclassification, when manual chart review is not feasible. Methods: Four participating databases retrieved data from primary care (PC) setting: BIFAP: (Spain), THIN and RCGP RSC (UK) and PEDIANET (Italy); SIDIAP (Spain) retrieved data from both PC and hospital settings. BorPer algorithms were defined by healthcare setting, data domain (diagnoses, drugs, or laboratory tests) and concept sets (specific or unspecified pertussis). Algorithm- and database-specific BorPer incidence rates (IRs) were estimated in children aged 0–14 years enrolled in 2012 and 2014 and followed up until the end of each calendar year and compared with IRs of confirmed pertussis from the ECDC surveillance system (TESSy). Novel formulas were used to approximate validity indices, based on a small set of assumptions. They were applied to approximately estimate positive predictive value (PPV) and sensitivity in SIDIAP. Results: The number of cases and the estimated BorPer IRs per 100,000 person-years in PC, using data representing 3,173,268 person-years, were 0 (IR = 0.0), 21 (IR = 4.3), 21 (IR = 5.1), 79 (IR = 5.7), and 2 (IR = 2.3) in BIFAP, SIDIAP, THIN, RCGP RSC and PEDIANET respectively. The IRs for combined specific/unspecified pertussis were higher than TESSy, suggesting that some false positives had been included. In SIDIAP the estimated IR was 45.0 when discharge diagnoses were included. The sensitivity and PPV of combined PC specific and unspecific diagnoses for BorPer cases in SIDIAP were approximately 85% and 72%, respectively. Conclusion: Retrieving BorPer cases using only specific concepts has low sensitivity in PC databases, while including cases retrieved by unspecified concepts introduces false positives, which were approximately estimated to be 28% in one database. The share of cases that cannot be retrieved from a PC database because they are only seen in hospital was approximately estimated to be 15% in one database. This study demonstrated that quantifying the impact of different event-finding algorithms across databases and benchmarking with disease surveillance data can provide approximate estimates of algorithm validity.
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- 2020
16. Exposure to dipeptidyl-peptidase 4 inhibitors and the risk of pneumonia among people with type 2 diabetes: Retrospective cohort study and meta-analysis
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Enrico Longato, Lara Tramontan, Mario Luca Morieri, Barbara Di Camilo, Angelo Avogaro, Gian Paolo Fadini, Giovanni Sparacino, and Benedetta Maria Bonora
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medicine.medical_specialty ,Endocrinology, Diabetes and Metabolism ,030209 endocrinology & metabolism ,030204 cardiovascular system & hematology ,Lower risk ,law.invention ,pharmaco-epidemiology ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,Randomized controlled trial ,systematic review ,Risk Factors ,law ,Internal medicine ,Internal Medicine ,medicine ,Humans ,Hypoglycemic Agents ,Outpatient clinic ,DPP-4 inhibitor, observational study, pharmaco-epidemiology, systematic review, type 2 diabetes ,DPP-4 inhibitor ,Randomized Controlled Trials as Topic ,Retrospective Studies ,Dipeptidyl-Peptidase IV Inhibitors ,business.industry ,Retrospective cohort study ,Pneumonia ,medicine.disease ,Diabetes Mellitus, Type 2 ,Meta-analysis ,Propensity score matching ,Observational study ,observational study ,type 2 diabetes ,business - Abstract
Aims Concerns have been raised that dipeptidyl-peptidase 4 inhibitors (DPP-4i) may increase the risk of pneumonia. We analysed observational data and clinical trials to explore whether use of DPP-4i modifies the risk of pneumonia. Methods We identified patients with diabetes in the Veneto Region administrative database and performed a propensity score matching (PSM) between new users of DPP-4 inhibitors and new users of other oral glucose lowering medications (OGLM). We compared the rate of hospitalization for pneumonia between matched cohorts using the Cox proportional hazard model. The same analysis was repeated using the database of a local diabetes outpatient clinic. We retrieved similar observational studies from the literature to perform a meta-analysis. Results from trials reporting pneumonia rates among patients randomized to DPP-4 inhibitors versus placebo/active comparator were also meta-analysed. Results In the Regional database, after matching 6495 patients/group, new users of DPP-4 inhibitors had a lower rate of hospitalization for pneumonia than new users of other OGLM (HR 0.76; 95% C.I. 0.61-0.95). In the outpatient database, after matching 867 patients/group, new users of DPP-4 inhibitors showed a non-significantly lower rate of hospitalization for pneumonia (HR 0.65; 95% C.I. 0.41-1.04). The meta-analysis of observational studies yielded an overall non-significant lower risk of hospitalization for pneumonia among DPP-4i users (RR 0.81; 95% C.I. 0.65-1.01). The meta-analysis of randomized controlled trials showed no overall effect of DPP-4i on pneumonia risk (RR 1.06; 95% C.I. 0.93-1.20). Conclusion Use of DPP-4i can be considered safe with regards to the risk of pneumonia. This article is protected by copyright. All rights reserved.
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- 2020
17. ADVANCE system testing: Can coverage of pertussis vaccination be estimated in European countries using electronic healthcare databases: An example
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Kaatje Bollaerts, Steffen Glismann, Hanne-Dorthe Emborg, Miriam C. J. M. Sturkenboom, Chris McGee, Elisa Martín-Merino, Consuelo Huerta-Alvarez, Ana Correa, Giorgia Danieli, Simon de Lusignan, Lara Tramontan, Daniel Weibel, Talita Duarte-Salles, Toon Braeye, Jorgen Bauwens, Johnny Kahlert, and Medical Informatics
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Whole cell pertussis vaccination ,Whooping Cough ,030231 tropical medicine ,Prevalence ,Vaccination coverage estimation ,computer.software_genre ,Database characteristics ,03 medical and health sciences ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Health care ,Electronic Health Records ,Humans ,Medicine ,Pertussis vaccination ,Cumulative incidence ,030212 general & internal medicine ,Child ,Pertussis Vaccine ,Acellular pertussis vaccination ,General Veterinary ,General Immunology and Microbiology ,Database ,business.industry ,Proof-of-concept study ,Vaccination ,Public Health, Environmental and Occupational Health ,Pertussis immunisation ,Europe ,Benchmarking ,Infectious Diseases ,Italy ,Spain ,Molecular Medicine ,Pertussis vaccine ,Estimation methods ,business ,Delivery of Health Care ,computer ,medicine.drug - Abstract
Introduction The Accelerated Development of VAccine beNefit-risk Collaboration in Europe (ADVANCE) is a public-private collaboration aiming to develop and test a system for rapid benefit-risk (B/R) monitoring of vaccines, using existing healthcare databases in Europe. The objective of this paper was to assess the feasibility of using electronic healthcare databases to estimate dose-specific acellular pertussis (aP) and whole cell pertussis (wP) vaccine coverage. Methods Seven electronic healthcare databases in four European countries (Denmark (n = 2), UK (n = 2), Spain (n = 2) and Italy (n = 1)) participated in this study. Children were included from birth and followed up to age six years. Vaccination exposure was obtained from the databases and classified by type (aP or wP), and dose 1, 2 or 3. Coverage was estimated using period prevalence. For the 2006 birth cohort, two estimation methods for pertussis vaccine coverage, period prevalence and cumulative incidence were compared for each database. Results The majority of the 2,575,576 children included had been vaccinated at the country-specific recommended ages. Overall, the estimated dose 3 coverage was 88–97% in Denmark (birth cohorts from 2003 to 2014), 96–100% in the UK (2003–2014), 95–98% in Spain (2004–2014) and 94% in Italy (2006–2007). The estimated dose 3 coverage per birth cohort in Denmark and the UK differed by 1–6% compared with national estimates, with our estimates mostly higher. The estimated dose 3 coverage in Spain differed by 0–2% with no consistent over- or underestimation. In Italy, the estimates were 3% lower compared with the national estimates. Except for Italy, for which the two coverage estimation methods generated the same results, the estimated cumulative incidence coverages were consistently 1–10% lower than period prevalence estimates. Conclusion This study showed that it was possible to provide consistent estimates of pertussis immunisation coverage from the electronic healthcare databases included, and that the estimates were comparable with the national estimates.
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- 2019
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18. Age-specific vaccination coverage estimates for influenza, human papillomavirus and measles containing vaccines from seven population-based healthcare databases from four EU countries - The ADVANCE project
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Lara Tramontan, Ana Llorente-García, Consuelo Huerta, Lina Titievsky, Marco Villa, Matti Lehtinen, Rosa Gini, Elisa Martín-Merino, Talita Duarte-Salles, Hanne-Dorthe Emborg, Toon Braeye, Chris McGee, Giorgia Danieli, Daniel Weibel, Miriam C. J. M. Sturkenboom, and Medical Informatics
- Subjects
Vaccination Coverage ,Adolescent ,030231 tropical medicine ,Alphapapillomavirus ,computer.software_genre ,Measles ,Cohort Studies ,03 medical and health sciences ,Papillomavirus Vaccines ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Health care ,Influenza, Human ,medicine ,Humans ,030212 general & internal medicine ,Human papillomavirus ,Child ,Papillomaviridae ,Birth Year ,Probability ,Aged ,Retrospective Studies ,Pertussis Vaccine ,General Veterinary ,General Immunology and Microbiology ,Database ,business.industry ,Inverse probability weighting ,Vaccination ,Public Health, Environmental and Occupational Health ,Age Factors ,Measles vaccines ,medicine.disease ,Europe ,Influenza vaccines ,Infectious Diseases ,Geography ,Italy ,Spain ,Molecular Medicine ,Population study ,business ,computer ,Delivery of Health Care ,Cohort study - Abstract
Background: The Accelerated Development of VAccine beNefit-risk Collaboration in Europe (ADVANCE) is a public-private collaboration aiming to develop and test a system for rapid benefit-risk monitoring of vaccines using existing healthcare databases in Europe. We estimated vaccine coverage from electronic healthcare databases as part of a fit-for-purpose assessment for vaccine benefit-risk studies. Methods: A retrospective dynamic cohort study was conducted through a distributed network approach. Coverage with measles-vaccine for birth year 2006, human papillomavirus (HPV)-vaccine for birth years 1990-2000 and influenza-vaccine for birth years 1920-1950 was estimated using period-prevalence and inverse probability weighting methods. Seven databases from four countries participated: Italy (Pedianet, Val Padana), Spain (BIFAP, SIDIAP), UK (RCGP-RSC, THIN), Denmark (SSI/AUH). Database access providers extracted the data, transformed it into a common structure and ran an R-script locally. The created output tables were shared and pooled at a central server. Results: The total study population comprised 274,616 persons for measles-vaccine, 2,011,666 persons for HPV-vaccine and 14,904,033 persons for influenza-vaccine. Measles-vaccine coverage varied from 84.3% (Denmark) to 96.5% (Italy, Val Padana) for the first dose and from 82.8% (Italy, Val Padana) to 90.9% (UK) for the second dose at the age of 7 years. The HPV-vaccine coverage, aggregated over birth years 1997-2000, ranged from 60% (UK) to 88.3% (Denmark) at the age of 15 years. The influenza-vaccine coverage for the influenza seasons from 2009 to 2015 for persons aged 65 years and more was roughly stable around 43% in Denmark and around 68% in the UK while a decrease from 58 to 50% was observed in Catalonia (Spain). Conclusions: We obtained detailed, age-specific coverage estimates though a common procedure. We discussed between database comparability and comparability to published national estimates. The Innovative Medicines Initiative Joint Undertaking funded this project under ADVANCE grant agreement no 115557, resources of which were composed of a financial contribution from the European Union's Seventh Framework Programme (FP7/2007-2013) and in kind contributions from EFPIA member companies. Braeye, T (reprint author), Sciensano, Rue Juliette Wytsman 14, B-1050 Brussels, Belgium. toon.braeye@sciensano.be
- Published
- 2019
19. Detecting Undiagnosed Diabetes: Proof-of-Concept Based on the Health-Information Exchange System of the Veneto Region (North-East Italy)
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Barbara Di Camillo, Lara Tramontan, Claudio Saccavini, Enrico Longato, Gian Paolo Fadini, Giovanni Sparacino, and Arianna Cocchiglia
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Blood Glucose ,medicine.medical_specialty ,Health Information Exchange ,030209 endocrinology & metabolism ,Disease ,North east ,Undiagnosed Diseases ,03 medical and health sciences ,0302 clinical medicine ,Diabetes mellitus ,Diabetes Mellitus ,medicine ,Humans ,030212 general & internal medicine ,Oral glucose tolerance ,Intensive care medicine ,Glycated haemoglobin ,Glycated Hemoglobin ,business.industry ,Public health ,Health information exchange ,Glucose Tolerance Test ,medicine.disease ,Italy ,Undiagnosed diabetes ,business - Abstract
Diabetes is a chronic illness characterised by elevated blood glucose levels, driving excess mortality. Its prompt detection and accurate management are critical for delaying complications. Nevertheless, diabetes can remain undiagnosed for years from the onset. The identification of undiagnosed diabetes is a public health priority: in Italy, it is estimated that up to 30% of diabetes cases remain undetected, i.e., that ~1.8 million citizens may be unaware they need medical help. Sometimes, this happens even though these subjects undergo routine or emergency check-ups. Veneto, a region in North-East Italy with 4.9 million residents, implements a regional Health Information Exchange system (rHIE) to collect healthcare data, including laboratory reports, and integrate them with administrative claims. Their combination may be instrumental in finding otherwise undetected cases of diabetes. On the one hand, known diabetic patients should have disease management-generated claims; on the other, laboratory test results can be independently evaluated against diagnostic criteria. In the present work, we examined the anonymised claims and laboratory data, extracted from the rHIE, of 23,376 citizens of the Veneto region. We compared their exemptions, diabetes-related hospitalisation discharge codes, and antidiabetic drugs between 2012 and 2018 to the results of their fasting glucose, glycated haemoglobin, and oral glucose tolerance tests in 2017-2018. We identified 1,407 (6.02%) subjects who, according to administrative claims, appear to be free from diabetes, but met at least one laboratory diagnostic criterion. Such a discrepancy suggests that these people may be undiagnosed diabetic patients. To the best of our knowledge, this is the first proof of concept of an automatic system for the detection of undiagnosed diabetes in Italy. Its full integration in the rHIE and its consequent capillary application could potentially reveal thousands of hidden cases throughout Veneto.
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- 2019
20. Impact of a vaccination programme in children vaccinated with ProQuad, and ProQuad-specific effectiveness against varicella in the Veneto region of Italy
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Audrey Souverain, Susanne Hartwig, Vincenzo Baldo, Céline Ballandras, Nadia Raccanello, Marco Villa, Rebecca Lundin, Giovanni Gabutti, Carlo Giaquinto, Lara Tramontan, Stéphane Thomas, Xavier Cornen, Emilia Perinetti, Chiara Poma, Antonio Scamarcia, Francesca Russo, and Luigi Cantarutti
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Male ,Pediatrics ,Databases, Factual ,Population impact ,Effectiveness ,Varicella ,Cohort Studies ,0302 clinical medicine ,Medical microbiology ,Chickenpox ,030212 general & internal medicine ,Registries ,Child ,Impact ,Italy ,Pedianet ,ProQuad ,Vaccine ,virus diseases ,Vaccination ,Infectious Diseases ,Treatment Outcome ,Child, Preschool ,Female ,Birth cohort ,Research Article ,medicine.medical_specialty ,Adolescent ,Context (language use) ,NO ,lcsh:Infectious and parasitic diseases ,Chickenpox Vaccine ,03 medical and health sciences ,030225 pediatrics ,medicine ,Humans ,lcsh:RC109-216 ,Vaccines, Combined ,Retrospective Studies ,Entire population ,business.industry ,Immunization Programs ,Infant, Newborn ,Infant ,Immunization ,Tropical medicine ,business ,Measles-Mumps-Rubella Vaccine - Abstract
Background Monovalent varicella vaccines have been available in the Veneto Region of Italy since 2004. In 2006, a single vaccine dose was added to the immunisation calendar for children aged 14 months. ProQuad®, a quadrivalent measles-mumps-rubella-varicella vaccine, was introduced in May 2007 and used, among other varicella vaccines, until October 2008. This study aimed to evaluate the effectiveness of a single dose of ProQuad, and the population impact of a vaccination program (VP) against varicella of any severity in children who received a first dose of ProQuad at 14 months of age in the Veneto Region, Methods All children born in 2006/2007, i.e., eligible for varicella vaccination after ProQuad was introduced, were retrospectively followed through individual-level data linkage between the Pedianet database (varicella cases) and the Regional Immunization Database (vaccination status). The direct effectiveness of ProQuad was estimated as the incidence rate of varicella in ProQuad-vaccinated children aged
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- 2018
21. Identifying cases of type 2 diabetes in heterogeneous data sources: strategy from the EMIF project
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Alessandro Pasqua, I Leal, Peter R. Rijnbeek, Francesco Lapi, David Ansell, Johan van der Lei, Lara Tramontan, A. Katrina Loomis, James A. Cunningham, Ron M. C. Herings, Lars Pedersen, Sulev Reisberg, Miriam C. J. M. Sturkenboom, Peter Egger, Mari-Liis Tammesoo, Rients P. T. van Wijngaarden, Rosa Gini, Giuseppe Roberto, Martijn J. Schuemie, Helene Alavere, Paul Avillach, Miguel Angel Mayer, Naveed Sattar, Preciosa M. Coloma, and Medical Informatics
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Male ,Databases, Factual ,lcsh:Medicine ,030204 cardiovascular system & hematology ,Bioinformatics ,Biochemistry ,Endocrinology ,0302 clinical medicine ,Documentation ,Medicine and Health Sciences ,Data Mining ,Insulin ,Medicine ,030212 general & internal medicine ,Medical diagnosis ,lcsh:Science ,education.field_of_study ,Diabetis ,Multidisciplinary ,Applied Mathematics ,Simulation and Modeling ,Data domain ,Unified Medical Language System ,Type 2 Diabetes ,3. Good health ,Europe ,Identification (information) ,Physical Sciences ,Female ,Protocols clínics ,Algorithms ,Record linkage ,Research Article ,Patients ,Endocrine Disorders ,Population ,Research and Analysis Methods ,Set (abstract data type) ,03 medical and health sciences ,SDG 3 - Good Health and Well-being ,Diagnostic Medicine ,Diabetes Mellitus ,Humans ,education ,Primary Care ,Pharmacology ,Diabetic Endocrinology ,Inpatients ,Drug Screening ,Information retrieval ,business.industry ,lcsh:R ,Biology and Life Sciences ,Hormones ,Health Care ,Diabetes Mellitus, Type 2 ,Metabolic Disorders ,Diabetes Diagnosis and Management ,lcsh:Q ,business ,Mathematics - Abstract
Due to the heterogeneity of existing European sources of observational healthcare data, data source-tailored choices are needed to execute multi-data source, multi-national epidemiological studies. This makes transparent documentation paramount. In this proof-of-concept study, a novel standard data derivation procedure was tested in a set of heterogeneous data sources. Identification of subjects with type 2 diabetes (T2DM) was the test case. We included three primary care data sources (PCDs), three record linkage of administrative and/or registry data sources (RLDs), one hospital and one biobank. Overall, data from 12 million subjects from six European countries were extracted. Based on a shared event definition, sixteeen standard algorithms (components) useful to identify T2DM cases were generated through a top-down/bottom-up iterative approach. Each component was based on one single data domain among diagnoses, drugs, diagnostic test utilization and laboratory results. Diagnoses-based components were subclassified considering the healthcare setting (primary, secondary, inpatient care). The Unified Medical Language System was used for semantic harmonization within data domains. Individual components were extracted and proportion of population identified was compared across data sources. Drug-based components performed similarly in RLDs and PCDs, unlike diagnoses-based components. Using components as building blocks, logical combinations with AND, OR, AND NOT were tested and local experts recommended their preferred data source-tailored combination. The population identified per data sources by resulting algorithms varied from 3.5% to 15.7%, however, age-specific results were fairly comparable. The impact of individual components was assessed: diagnoses-based components identified the majority of cases in PCDs (93-100%), while drug-based components were the main contributors in RLDs (81-100%). The proposed data derivation procedure allowed the generation of data source-tailored case-finding algorithms in a standardized fashion, facilitated transparent documentation of the process and benchmarking of data sources, and provided bases for interpretation of possible inter-data source inconsistency of findings in future studies. The research leading to these results has received support from the Innovative Medicines Initiative Joint Undertaking (http://www.imi.europa.eu/) under European Medical Information Framework grant agreement no. 115372, resources of which are composed of financial contribution from the European Union's Seventh Framework Programme (FP7/2007-2013) and European Federation of Pharmaceutical Industries and Association companies’ in kind contribution. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Pfizer Worldwide Research and Development, GlaxoSmithKline, Cegedim Strategic Data Medical Research Ltd and Janssen provided support in the form of salaries for AKL, PE, DA and MJS, respectively, but did not have any additional role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript. The specific roles of these authors are articulated in the ‘author contributions’ section.
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- 2016
22. A Web-Based System for the Quantitative and Reproducible Assessment of Clinical Indexes From the Retinal Vasculature
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D. Fiorin, Enea Poletti, Alfredo Ruggeri, and Lara Tramontan
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Computer science ,Interface (computing) ,Biomedical Engineering ,Fundus (eye) ,Microcirculation ,Set (abstract data type) ,Ophthalmoscopy ,User-Computer Interface ,chemistry.chemical_compound ,Image Processing, Computer-Assisted ,medicine ,Health Status Indicators ,Humans ,Computer vision ,Internet ,Retina ,medicine.diagnostic_test ,business.industry ,Retinal Vessels ,Retinal ,medicine.disease ,Identification (information) ,Tree (data structure) ,medicine.anatomical_structure ,chemistry ,Artificial intelligence ,business ,Algorithms ,Retinopathy - Abstract
A novel system for the vascular tree identification and the quantitative estimation of arteriolar venular ratio clinical index in retinal fundus images is presented. The system is composed of a module for automatic vascular tracking, an interactive editing interface to correct errors and set the required parameters of analysis, and a module for the computation of clinical indexes. The system was organized as a client-server structure to allow clinicians and researchers from all over the world to work remotely. The system was evaluated by three graders analyzing 30 fundus images. The evaluation of the Pearson's correlation coefficient and p-value of a paired t-test for each pair of graders demonstrates the high reproducibility of the measures provided by the system.
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- 2011
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23. From Laboratory to Clinic: the Development of Web-based Tools for the Estimation of Retinal Diagnostic Parameters
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Alfredo Ruggeri, Lara Tramontan, D. Fiorin, and Enea Poletti
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Estimation ,Adult ,Internet ,Research groups ,business.industry ,Infant, Newborn ,Retinal Vessels ,Retinal ,Retinopathy of prematurity ,medicine.disease ,Sensitivity and Specificity ,chemistry.chemical_compound ,chemistry ,Retinal Diseases ,Health care ,Optometry ,Web application ,Medicine ,Humans ,Computer vision ,Artificial intelligence ,business ,Reliability (statistics) ,Retinopathy - Abstract
Over the years, tools for the analysis of retinal images have been developed by several research groups but their usage has been mainly confined within the developing institutions. One possibility to foster their adoption is to develop them as web-based tools. We present here three such systems we recently developed. They are specifically focused on the estimation of retinal vascular parameters, such as arteriolar narrowing (AVR parameter), vessel tortuosity, and vessel caliber narrowing and tortuosity in retinopathy of prematurity (ROP) images. These systems have been successfully evaluated as regards their reliability and will soon be publicly available to interested health care providers.
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- 2011
24. Computer estimation of the AVR parameter in diabetic retinopathy
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Alfredo Ruggeri and Lara Tramontan
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Vessel network ,Correlation coefficient ,Computer science ,business.industry ,Diabetic retinopathy ,Fundus (eye) ,medicine.disease ,Diameter ratio ,Region of interest ,Caliber ,cardiovascular system ,medicine ,Computer vision ,Artificial intelligence ,business ,All arterioles - Abstract
The Arteriolar-to-Venular diameter Ratio (AVR), a parameter derived from vessel caliber measurements in a specific region of retinal images, is used as a descriptor of generalized arteriolar narrowing, an eye fundus sign often seen in patients affected by hypertensive or diabetic retinopathies. The manual computation of AVR is a tedious process, involving repeated measurements of the diameters of all arterioles and venules in the region by human graders. To facilitate large-scale clinical use, an accurate, rapid and efficient system to compute AVR is required. We developed a semiautomatic computer procedure to achieve this goal. At first the vessel network is traced by a vessel tracking algorithm and vessel caliber is estimated. In the region of interest for estimation of AVR, vessels are classified as either arteries or veins and AVR parameter is eventually computed. The algorithm has shown good performances in 38 images extracted from two large datasets (DCCT and ETDRS studies). Results provided by the proposed system have been compared with manually derived AVR values on the fundus images, resulting in a final correlation coefficient of 0.95 for the ETDRS subset and of 0.91 for the DCCT subset. User interaction is limited to correct tracking errors in 2 vessels per image and classification errors in 1 vessel per image on average.
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- 2009
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25. Automatic estimation of the arteriolar-to-venular diameter ratio (AVR) in retinal images
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Alfredo Ruggeri, Enrico Grisan, and Lara Tramontan
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Vessel network ,Correlation coefficient ,business.industry ,Retinal ,Pattern recognition ,General Medicine ,Confidence interval ,Ophthalmology ,Diameter ratio ,chemistry.chemical_compound ,medicine.anatomical_structure ,chemistry ,Caliber ,medicine ,Computerized system ,Artificial intelligence ,business ,Optic disc ,Mathematics - Abstract
Purpose The Arteriolar-to-Venular diameter Ratio (AVR), a parameter derived from vessel caliber measurements in a specific region of retinal images, is used as a descriptor of generalized arteriolar narrowing. We developed a computerized system to compute AVR in a totally automatic way. Methods Images are at first enhanced to highlight the vessel network, which is then traced by a vessel tracking algorithm. From the detected vessel structure, the position of the optic disc is derived and the region inside which the AVR data are to be measured is determined. Vessels within this region are classified as either arteries or veins, their caliber estimated and the AVR parameter is eventually computed. Results provided by the system have been compared with manually derived AVR values on 20 eye fundus images. Results Mean and SD values from the two sets of measurements are the same, and automatic/manual ratios have an average value of 1 and 95% confidence interval of (0.98-1.02). The correlation coefficient between the two methods is 0.88. In only two images the ratio is appreciably different from unity, 1.14 and 0.89 respectively. A detailed analysis of these cases revealed that in each image the wrong classification of one vessel only was the cause for these unsatisfactory results. When these misclassifications are manually corrected, e.g. with a quick editing tool that can be easily made available to the user, the ratios become 0.95 and 0.99, respectively, and the overall correlation coefficient becomes 0.97. Conclusion Additional evaluation on a larger set of images, acquired from subjects exhibiting wide variations of AVR, will be performed in order to fully assess the reliability and clinical applicability of this automatic procedure.
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- 2008
26. An improved system for the automatic estimation of the Arteriolar-to-Venular diameter Ratio (AVR) in retinal images
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Alfredo Ruggeri, Lara Tramontan, and Enrico Grisan
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Retinal Artery ,Image processing ,Retina ,Microcirculation ,chemistry.chemical_compound ,Image Interpretation, Computer-Assisted ,medicine ,Image Processing, Computer-Assisted ,Humans ,Computer vision ,Diagnosis, Computer-Assisted ,Vein ,Mathematics ,Diabetic Retinopathy ,Models, Statistical ,business.industry ,Reproducibility of Results ,Retinal ,Retinal Vein ,Capillaries ,Diameter ratio ,medicine.anatomical_structure ,chemistry ,Caliber ,Hypertension ,cardiovascular system ,Artificial intelligence ,business ,Algorithms ,Biomedical engineering ,Artery ,Optic disc - Abstract
The Arteriolar-to-Venular diameter Ratio (AVR), a parameter derived from vessel caliber measurements in a specific region of retinal images, is used as a descriptor of generalized arteriolar narrowing, an eye fundus sign often seen in patients affected by hypertensive or diabetic retinopathies. We developed an improved system to compute AVR in a totally automatic way. Images are at first enhanced to highlight the vessel network, which is then traced by a vessel tracking algorithm. From the detected vessel structure, the position of the optic disc is derived and the region inside which the AVR data are to be measured is determined. Vessels within this region are classified as either arteries or veins, their caliber is estimated and the AVR parameter is eventually computed. Improvements with respect to the previous version are related to post-processing algorithms to enhance vessel tracking and a totally new artery/vein discrimination technique. Results provided by the new system have been compared with manually derived AVR values on 20 eye fundus images, resulting in a final correlation coefficient of 0.88.
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