1. Comparative genomic analysis of head and body/tail of pancreatic ductal adenocarcinoma at early and late stages
- Author
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Wu Zhang, Qi Ling, Shi Feng, Qinfen Xie, Haitao Huang, Lingjian Wang, Qian Wang, Ming Yao, Ruihan Chen, X. Zhang, Aodi Wang, and Shuirong Zhang
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Mutation rate ,Pancreatic ductal adenocarcinoma ,pancreatic ductal adenocarcinoma ,body/tail ,medicine.disease_cause ,tumour location ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Biopsy ,Biomarkers, Tumor ,medicine ,Humans ,Mutation frequency ,Neoplasm Staging ,Mutation ,medicine.diagnostic_test ,business.industry ,Gene Expression Profiling ,High-Throughput Nucleotide Sequencing ,Cancer ,Original Articles ,Genomics ,Cell Biology ,head ,Prognosis ,medicine.disease ,Gene Expression Regulation, Neoplastic ,Pancreatic Neoplasms ,Exact test ,druggable ,030104 developmental biology ,030220 oncology & carcinogenesis ,Molecular Medicine ,Original Article ,KRAS ,genomic profiling ,Neoplasm Grading ,business ,Carcinoma, Pancreatic Ductal ,Signal Transduction - Abstract
Pancreatic ductal adenocarcinoma (PDAC), one of the most lethal human cancers, can be divided into head and body/tail cancers anatomically. We previously reported a prognostic relevance of tumour location in resectable PDAC. This study aimed to further explore the mechanism underlying the molecular diversity between the head and body/tail of PDACs. We detected tumour genomes in 154 resectable (surgery) and non‐resectable (biopsy) PDACs using a next‐generation sequencing panel. Wilcoxon's rank test or Fisher's exact test was used for evaluating associations between clinical characteristics, mutation frequency and survival probability between the two cohorts. Compared with pancreatic head cancers, pancreatic body/tail cancers showed significantly more enriched genomic alterations in KRAS (97.1% vs 82.4%, P = 0.004) and SMAD4 (42.0% vs 21.2%, P = 0.008). At early stages (I‐II), the SMAD4 mutation rate was significantly higher in pancreatic body/tail cancers than pancreatic head cancers (56.0% vs 26.5%, P = 0.021). At late stages (III‐IV), pancreatic body/tail cancers presented significantly higher KRAS mutation rate (100.0% vs 75.8%, P = 0.001), higher frequency of MAPK pathway mutation (100% vs 87.8%, P = 0.040) and lower rates of druggable genomic alterations (30.8% vs 57.6%, P = 0.030) than pancreatic head cancers. Our work points out that pancreatic body/tail cancer seems to be more malignant than pancreatic head cancer at late stages.
- Published
- 2021