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The stigma ofCaesalpinia pulcherrimais crateriform. The crater continues as a slit-like canal through the style and into the ovary. Both crater and canal are lined by several layers of fusiform and thin-walled cells which are continuous in two narrow regions in the ovary. Post-anthesis and before pollination, the middle lamella of cells lining the stigmatic crater and stylar transmitting tissue undergoes dissolution. This occurs in a progression down the style with cells separating partially or wholly from neighbours. Dissolution is initiated at intercellular junctions where wall fibrils loosen and variously-sized and -shaped holes appear. Cytoplasmic changes include increased dictyosome activity, increased rough and smooth endoplasmic reticulum at the periphery of cells and accumulation of electron opaque deposits at the plasma membrane. The crater fills with stigmatic fluid and the diameter of the stylar canal increases. Pollen germinates in the secretion-filled crater, and pollen tubes grow down the style between the cells of the transmitting tissue but do not enter the canal. They emerge at the entrance to the ovary cavity and grow over one or two narrow strips of ovarian transmitting tissue cells which are present throughout the length of the ovary close to the ovules. This ensures that tubes grow in close proximity to the micropyles.

Infections with the malaria parasite Plasmodium falciparum result in more than 1 million deaths each year worldwide. Deciphering the evolutionary history and genetic variation of P. falciparum is critical for understanding the evolution of drug resistance, identifying potential vaccine candidates and appreciating the effect of parasite variation on prevalence and severity of malaria in humans. Most studies of natural variation in P. falciparum have been either in depth over small genomic regions (up to the size of a small chromosome) or genome wide but only at low resolution. In an effort to complement these studies with genome-wide data, we undertook shotgun sequencing of a Ghanaian clinical isolate (with fivefold coverage), the IT laboratory isolate (with onefold coverage) and the chimpanzee parasite P. reichenowi (with twofold coverage). We compared these sequences with the fully sequenced P. falciparum 3D7 isolate genome. We describe the most salient features of P. falciparum polymorphism and adaptive evolution with relation to gene function, transcript and protein expression and cellular localization. This analysis uncovers the primary evolutionary changes that have occurred since the P. falciparum-P. reichenowi speciation and changes that are occurring within P. falciparum.

Nat. Genet. 39, 120–125 (2007); published online 10 December 2006; corrected after print 8 February 2007 In the original version of this paper, the authors failed to acknowledge that sequencing of the P. falciparum IT laboratory isolate was funded by a European Union 6th Framework Program grant to the BioMalPar Consortium (contract number LSHP-LT-2004-503578).