26 results on '"Freedman, Laurence S."'
Search Results
2. Seemingly Unrelated Measurement Error Models, with Application to Nutritional Epidemiology
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Carroll, Raymond J., Midthune, Douglas, Freedman, Laurence S., and Kipnis, Victor
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- 2006
3. A New Method for Dealing with Measurement Error in Explanatory Variables of Regression Models
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Freedman, Laurence S., Fainberg, Vitaly, Kipnis, Victor, Midthune, Douglas, and Carroll, Raymond J.
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- 2004
4. Covariate Measurement Error Adjustment for Matched Case-Control Studies
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McShane, Lisa M., Midthune, Douglas N., Dorgan, Joanne F., Freedman, Laurence S., and Carroll, Raymond J.
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- 2001
5. A New Class of Measurement-Error Models, with Applications to Dietary Data
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Carroll, Raymond J., Freedman, Laurence S., and Kipnis, Victor
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- 1998
6. Binary Regression in Truncated Samples, with Application to Comparing Dietary Instruments in a Large Prospective Study
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Midthune, Douglas, Kipnis, Victor, Freedman, Laurence S., and Carroll, Raymond J.
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- 2008
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7. Adjusting for Time Trends When Estimating the Relationship between Dietary Intake Obtained from a Food Frequency Questionnaire and True Average Intake
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Landin, Richard, Freedman, Laurence S., and Carroll, Raymond J.
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- 1995
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8. Investigating the performance of 24-h urinary sucrose and fructose as a biomarker of total sugars intake in US participants – a controlled feeding study.
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Tasevska, Natasha, Sagi-Kiss, Virag, Palma-Duran, Susana A, Barrett, Brian, Chaloux, Matthew, Commins, John, O'Brien, Diane M, Johnston, Carol S, Midthune, Douglas, Kipnis, Victor, and Freedman, Laurence S
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BIOMARKERS ,SUCROSE ,AGE distribution ,INGESTION ,FRUCTOSE ,DIETARY sucrose ,SEX distribution ,DESCRIPTIVE statistics ,MEASUREMENT errors - Abstract
Background Developing approaches for the objective assessment of sugars intake in population research is crucial for generating reliable disease risk estimates, and evidence-based dietary guidelines. Twenty-four-hour urinary sucrose and fructose (24uSF) was developed as a predictive biomarker of total sugars intake based on 3 UK feeding studies, yet its performance as a biomarker of total sugars among US participants is unknown. Objectives To investigate the performance of 24uSF as a biomarker of sugars intake among US participants, and to characterize its use. Methods Ninety-eight participants, aged 18–70 y, consumed their usual diet under controlled conditions of a feeding study for 15 d, and collected 8 nonconsecutive 24-h urines measured for sucrose and fructose. Results A linear mixed model regressing log 24uSF biomarker on log total sugars intake along with other covariates explained 56% of the biomarker variance. Total sugars intake was the strongest predictor in the model (Marginal R
2 = 0.52; P <0.0001), followed by sex (P = 0.0002) and log age (P = 0.002). The equation was then inverted to solve for total sugars intake, thus generating a calibrated biomarker equation. Calibration of the biomarker produced mean biomarker-based log total sugars of 4.79 (SD = 0.59), which was similar to the observed log 15-d mean total sugars intake of 4.69 (0.35). The correlation between calibrated biomarker and usual total sugars intake was 0.59 for the calibrated biomarker based on a single biomarker measurement, and 0.76 based on 4 biomarker repeats spaced far apart. Conclusions In this controlled feeding study, total sugars intake was the main determinant of 24uSF confirming its utility as a biomarker of total sugars in this population. Next steps will include validation of stability assumptions of the biomarker calibration equation proposed here, which will allow its use as an instrument for dietary validation and measurement error correction in diet-disease association studies. [ABSTRACT FROM AUTHOR]- Published
- 2021
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9. STRATOS guidance document on measurement error and misclassification of variables in observational epidemiology: Part 1-Basic theory and simple methods of adjustment.
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Keogh, Ruth H., Shaw, Pamela A., Gustafson, Paul, Carroll, Raymond J., Deffner, Veronika, Dodd, Kevin W., Küchenhoff, Helmut, Tooze, Janet A., Wallace, Michael P., Kipnis, Victor, and Freedman, Laurence S.
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MEASUREMENT errors ,INFORMATION measurement ,EPIDEMIOLOGY ,EXTRAPOLATION ,STATISTICS - Abstract
Measurement error and misclassification of variables frequently occur in epidemiology and involve variables important to public health. Their presence can impact strongly on results of statistical analyses involving such variables. However, investigators commonly fail to pay attention to biases resulting from such mismeasurement. We provide, in two parts, an overview of the types of error that occur, their impacts on analytic results, and statistical methods to mitigate the biases that they cause. In this first part, we review different types of measurement error and misclassification, emphasizing the classical, linear, and Berkson models, and on the concepts of nondifferential and differential error. We describe the impacts of these types of error in covariates and in outcome variables on various analyses, including estimation and testing in regression models and estimating distributions. We outline types of ancillary studies required to provide information about such errors and discuss the implications of covariate measurement error for study design. Methods for ascertaining sample size requirements are outlined, both for ancillary studies designed to provide information about measurement error and for main studies where the exposure of interest is measured with error. We describe two of the simpler methods, regression calibration and simulation extrapolation (SIMEX), that adjust for bias in regression coefficients caused by measurement error in continuous covariates, and illustrate their use through examples drawn from the Observing Protein and Energy (OPEN) dietary validation study. Finally, we review software available for implementing these methods. The second part of the article deals with more advanced topics. [ABSTRACT FROM AUTHOR]
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- 2020
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10. Combining a Food Frequency Questionnaire With 24-Hour Recalls to Increase the Precision of Estimation of Usual Dietary Intakes—Evidence From the Validation Studies Pooling Project.
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Freedman, Laurence S, Midthune, Douglas, Arab, Lenore, Prentice, Ross L, Subar, Amy F, Willett, Walter, Neuhouser, Marian L, Tinker, Lesley F, and Kipnis, Victor
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BIOMARKERS , *SODIUM content of food , *INGESTION , *RESEARCH methodology , *NUTRITION , *NUTRITIONAL assessment , *POTASSIUM compounds , *DIETARY proteins , *PHYSICAL activity , *ACCURACY - Abstract
Improving estimates of individuals' dietary intakes is key to obtaining more reliable evidence for diet-health relationships from nutritional cohort studies. One approach to improvement is combining information from different self-report instruments. Previous work evaluated the gains obtained from combining information from a food frequency questionnaire (FFQ) and multiple 24-hour recalls (24HRs), based on assuming that 24HRs provide unbiased measures of individual intakes. Here we evaluate the same approach of combining instruments but base it on the better assumption that recovery biomarkers provide unbiased measures of individual intakes. Our analysis uses data from the 5 large validation studies included in the Validation Studies Pooling Project: the Observing Protein and Energy Nutrition Study (1999–2000), the Automated Multiple-Pass Method validation study (2002–2004), the Energetics Study (2006–2009), the Nutrition Biomarker Study (2004–2005), and the Nutrition and Physical Activity Assessment Study (2007–2009). The data included intakes of energy, protein, potassium, and sodium. Under a time-varying usual-intake model analysis, the combination of an FFQ with 4 24HRs improved correlations with true intake for predicted protein density, potassium density, and sodium density (range, 0.39–0.61) in comparison with use of a single FFQ (range, 0.34–0.50). Absolute increases in correlation ranged from 0.02 to 0.26, depending on nutrient and sex, with an average increase of 0.14. Based on unbiased recovery biomarker evaluation for these nutrients, we confirm that combining an FFQ with multiple 24HRs modestly improves the accuracy of estimates of individual intakes. [ABSTRACT FROM AUTHOR]
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- 2018
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11. Evaluation of the 24-Hour Recall as a Reference Instrument for Calibrating Other Self-Report Instruments in Nutritional Cohort Studies: Evidence From the Validation Studies Pooling Project.
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Freedman, Laurence S., Commins, John M., Willett, Walter, Tinker, Lesley F., Spiegelman, Donna, Rhodes, Donna, Potischman, Nancy, Neuhouser, Marian L., Moshfegh, Alanna J., Kipnis, Victor, Baer, David J., Arab, Lenore, Prentice, Ross L., and Subar, Amy F.
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BIOLOGICAL models , *CALIBRATION , *DIET , *SODIUM content of food , *INGESTION , *RESEARCH methodology , *NUTRITION , *NUTRITIONAL requirements , *POTASSIUM , *DIETARY proteins , *QUESTIONNAIRES , *SELF-evaluation , *MEASUREMENT errors , *BODY mass index , *RELATIVE medical risk , *RESEARCH bias , *CONTENT mining , *DESCRIPTIVE statistics - Abstract
Calibrating dietary self-report instruments is recommended as a way to adjust for measurement error when estimating diet-disease associations. Because biomarkers available for calibration are limited, most investigators use self-reports (e.g., 24-hour recalls (24HRs)) as the reference instrument. We evaluated the performance of 24HRs as reference instruments for calibrating food frequency questionnaires (FFQs), using data from the Validation Studies Pooling Project, comprising 5 large validation studies using recovery biomarkers. Using 24HRs as reference instruments, we estimated attenuation factors, correlations with truth, and calibration equations for FFQ-reported intakes of energy and for protein, potassium, and sodium and their densities, and we compared them with values derived using biomarkers. Based on 24HRs, FFQ attenuation factors were substantially overestimated for energy and sodium intakes, less for protein and potassium, and minimally for nutrient densities. FFQ correlations with truth, based on 24HRs, were substantially overestimated for all dietary components. Calibration equations did not capture dependencies on body mass index. We also compared predicted bias in estimated relative risks adjusted using 24HRs as reference instruments with bias when making no adjustment. In disease models with energy and 1 or more nutrient intakes, predicted bias in estimated nutrient relative risks was reduced on average, but bias in the energy risk coefficient was unchanged. [ABSTRACT FROM AUTHOR]
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- 2017
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12. Invited Commentary: The Contribution to the Field of Nutritional Epidemiology of the Landmark 1985 Publication by Willett et al.
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Subar, Amy F., Kushi, Lawrence H., Lerman, Jennifer L., and Freedman, Laurence S.
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EPIDEMIOLOGY ,RESEARCH methodology ,NUTRITION ,ACQUISITION of data - Abstract
The semiquantitative food frequency questionnaire (FFQ) has been the primary source of dietary exposure data in epidemiology for decades. Although frequency instruments had been evaluated before the 1985 publication "Reproducibility and Validity of a Semiquantitative Food Frequency Questionnaire" by Willett et al. (Am J Epidemiol. 1985;122(1):51-65), that paper was the prototype for the development and validation of what was then a highly innovative method for collecting dietary data. This approach was adopted in nearly all subsequent cohort studies of diet and disease. The paper also catalyzed an extended scientific discourse regarding methods for validation, energy adjustment, and measurement error. It is now well established that data from FFQs and other selfreported dietary assessment instruments have both value and error and that this error should be considered in the analysis and interpretation of findings, including sensitivity analyses in which adjustment for measurement error is explored. Advances in technology make it feasible to consider collecting multiple granular short-term instruments such as recalls or records over time in addition to FFQs among all participants in large cohort studies; both provide valuable information. Without a doubt, the 1985 publication by Willett et al. provided the foundation that propelled the field of nutritional epidemiology forward, and it continues to be relevant today. [ABSTRACT FROM AUTHOR]
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- 2017
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13. Statistical issues related to dietary intake as the response variable in intervention trials.
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Keogh, Ruth H., Carroll, Raymond J., Tooze, Janet A., Kirkpatrick, Sharon I., and Freedman, Laurence S.
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BIOMETRY ,DIET ,RESEARCH evaluation ,SELF-evaluation ,FOOD diaries - Abstract
The focus of this paper is dietary intervention trials. We explore the statistical issues involved when the response variable, intake of a food or nutrient, is based on self-report data that are subject to inherent measurement error. There has been little work on handling error in this context. A particular feature of self-reported dietary intake data is that the error may be differential by intervention group. Measurement error methods require information on the nature of the errors in the self-report data. We assume that there is a calibration sub-study in which unbiased biomarker data are available. We outline methods for handling measurement error in this setting and use theory and simulations to investigate how self-report and biomarker data may be combined to estimate the intervention effect. Methods are illustrated using data from the Trial of Nonpharmacologic Intervention in the Elderly, in which the intervention was a sodium-lowering diet and the response was sodium intake. Simulations are used to investigate the methods under differential error, differing reliability of self-reports relative to biomarkers and different proportions of individuals in the calibration sub-study. When the reliability of self-report measurements is comparable with that of the biomarker, it is advantageous to use the self-report data in addition to the biomarker to estimate the intervention effect. If, however, the reliability of the self-report data is low compared with that in the biomarker, then, there is little to be gained by using the self-report data. Our findings have important implications for the design of dietary intervention trials. © 2016 The Authors. Statistics in Medicine published by John Wiley & Sons Ltd. [ABSTRACT FROM AUTHOR]
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- 2016
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14. Methods to assess measurement error in questionnaires of sedentary behavior.
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Sampson, Joshua N., Matthews, Charles E., Freedman, Laurence S., Carroll, Raymond J., and Kipnis, Victor
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MEASUREMENT errors ,SEDENTARY behavior ,EPIDEMIOLOGICAL research ,CARDIOVASCULAR diseases ,ACCELEROMETERS - Abstract
Sedentary behavior has already been associated with mortality, cardiovascular disease, and cancer. Questionnaires are an affordable tool for measuring sedentary behavior in large epidemiological studies. Here, we introduce and evaluate two statistical methods for quantifying measurement error in questionnaires. Accurate estimates are needed for assessing questionnaire quality. The two methods would be applied to validation studies that measure a sedentary behavior by both questionnaire and accelerometer on multiple days. The first method fits a reduced model by assuming the accelerometer is without error, while the second method fits a more complete model that allows both measures to have error. Because accelerometers tend to be highly accurate, we show that ignoring the accelerometer's measurement error, can result in more accurate estimates of measurement error in some scenarios. In this article, we derive asymptotic approximations for the mean-squared error of the estimated parameters from both methods, evaluate their dependence on study design and behavior characteristics, and offer an R package so investigators can make an informed choice between the two methods. We demonstrate the difference between the two methods in a recent validation study comparing previous day recalls to an accelerometer-based ActivPal. [ABSTRACT FROM PUBLISHER]
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- 2016
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15. Measurement error models with interactions.
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MIDTHUNE, DOUGLAS, CARROLL, RAYMOND J., FREEDMAN, LAURENCE S., and KIPNIS, VICTOR
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MEASUREMENT uncertainty (Statistics) ,ERRORS-in-variables models ,MEASUREMENT errors ,BIOMETRIC research ,BIOLOGICAL mathematical modeling ,BIOMETRY ,CALIBRATION ,COMPUTER simulation ,DIET ,EXPERIMENTAL design ,REGRESSION analysis ,BODY mass index ,STATISTICAL models - Abstract
An important use of measurement error models is to correct regression models for bias due to covariate measurement error. Most measurement error models assume that the observed error-prone covariate (WW ) is a linear function of the unobserved true covariate (X) plus other covariates (Z) in the regression model. In this paper, we consider models for W that include interactions between X and Z. We derive the conditional distribution of X given W and Z and use it to extend the method of regression calibration to this class of measurement error models. We apply the model to dietary data and test whether self-reported dietary intake includes an interaction between true intake and body mass index. We also perform simulations to compare the model to simpler approximate calibration models. [ABSTRACT FROM AUTHOR]
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- 2016
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16. A Bivariate Measurement Error Model for Semicontinuous and Continuous Variables: Application to Nutritional Epidemiology.
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Kipnis, Victor, Freedman, Laurence S., Carroll, Raymond J., and Midthune, Douglas
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BIVARIATE analysis , *EPIDEMIOLOGY , *DIET , *ANALYSIS of covariance , *REGRESSION analysis - Abstract
Semicontinuous data in the form of a mixture of a large portion of zero values and continuously distributed positive values frequently arise in many areas of biostatistics. This article is motivated by the analysis of relationships between disease outcomes and intakes of episodically consumed dietary components. An important aspect of studies in nutritional epidemiology is that true diet is unobservable and commonly evaluated by food frequency questionnaires with substantial measurement error. Following the regression calibration approach for measurement error correction, unknown individual intakes in the risk model are replaced by their conditional expectations given mismeasured intakes and other model covariates. Those regression calibration predictors are estimated using short-term unbiased reference measurements in a calibration substudy. Since dietary intakes are often "energy-adjusted," e.g., by using ratios of the intake of interest to total energy intake, the correct estimation of the regression calibration predictor for each energy-adjusted episodically consumed dietary component requires modeling short-term reference measurements of the component (a semicontinuous variable), and energy (a continuous variable) simultaneously in a bivariate model. In this article, we develop such a bivariate model, together with its application to regression calibration. We illustrate the new methodology using data from the NIH-AARP Diet and Health Study (Schatzkin et al., 2001, American Journal of Epidemiology 154, 1119-1125), and also evaluate its performance in a simulation study. [ABSTRACT FROM AUTHOR]
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- 2016
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17. Addressing Current Criticism Regarding the Value of Self-Report Dietary Data.
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Subar, Amy F., Freedman, Laurence S., Tooze, Janet A., Kirkpatrick, Sharon I., Boushey, Carol, Neuhouser, Marian L., Thompson, Frances E., Potischman, Nancy, Guenther, Patricia M., Tarasuk, Valerie, Reedy, Jill, and Krebs-Smith, Susan M.
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FOOD habits , *DIET , *NUTRITION , *NUTRITION policy , *HEALTH policy , *BEVERAGES , *DIET therapy , *FOOD , *INGESTION , *MEMORY , *PUBLIC health , *SELF-evaluation , *ACQUISITION of data , *FOOD diaries , *STANDARDS - Abstract
Recent reports have asserted that, because of energy underreporting, dietary self-report data suffer from measurement error so great that findings that rely on them are of no value. This commentary considers the amassed evidence that shows that self-report dietary intake data can successfully be used to inform dietary guidance and public health policy. Topics discussed include what is known and what can be done about the measurement error inherent in data collected by using self-report dietary assessment instruments and the extent and magnitude of underreporting energy compared with other nutrients and food groups. Also discussed is the overall impact of energy underreporting on dietary surveillance and nutritional epidemiology. In conclusion, 7 specific recommendations for collecting, analyzing, and interpreting self-report dietary data are provided: (1) continue to collect self-report dietary intake data because they contain valuable, rich, and critical information about foods and beverages consumed by populations that can be used to inform nutrition policy and assess diet-disease associations; (2) do not use self-reported energy intake as a measure of true energy intake; (3) do use self-reported energy intake for energy adjustment of other self-reported dietary constituents to improve risk estimation in studies of diet-health associations; (4) acknowledge the limitations of self-report dietary data and analyze and interpret them appropriately; (5) design studies and conduct analyses that allow adjustment for measurement error; (6) design new epidemiologic studies to collect dietary data from both short-term (recalls or food records) and long-term (food-frequency questionnaires) instruments on the entire study population to allow for maximizing the strengths of each instrument; and (7) continue to develop, evaluate, and further expand methods of dietary assessment, including dietary biomarkers and methods using new technologies. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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18. Regression calibration with more surrogates than mismeasured variables.
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Kipnis, Victor, Midthune, Douglas, Freedman, Laurence S., and Carroll, Raymond J.
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In a recent paper (Weller EA, Milton DK, Eisen EA, Spiegelman D. Regression calibration for logistic regression with multiple surrogates for one exposure. Journal of Statistical Planning and Inference 2007; 137: 449-461), the authors discussed fitting logistic regression models when a scalar main explanatory variable is measured with error by several surrogates, that is, a situation with more surrogates than variables measured with error. They compared two methods of adjusting for measurement error using a regression calibration approximate model as if it were exact. One is the standard regression calibration approach consisting of substituting an estimated conditional expectation of the true covariate given observed data in the logistic regression. The other is a novel two-stage approach when the logistic regression is fitted to multiple surrogates, and then a linear combination of estimated slopes is formed as the estimate of interest. Applying estimated asymptotic variances for both methods in a single data set with some sensitivity analysis, the authors asserted superiority of their two-stage approach. We investigate this claim in some detail. A troubling aspect of the proposed two-stage method is that, unlike standard regression calibration and a natural form of maximum likelihood, the resulting estimates are not invariant to reparameterization of nuisance parameters in the model. We show, however, that, under the regression calibration approximation, the two-stage method is asymptotically equivalent to a maximum likelihood formulation, and is therefore in theory superior to standard regression calibration. However, our extensive finite-sample simulations in the practically important parameter space where the regression calibration model provides a good approximation failed to uncover such superiority of the two-stage method. We also discuss extensions to different data structures. Copyright © 2012 John Wiley & Sons, Ltd. [ABSTRACT FROM AUTHOR]
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- 2012
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19. Taking Advantage of the Strengths of 2 Different Dietary Assessment Instruments to Improve Intake Estimates for Nutritional Epidemiology.
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Carroll, Raymond J., Midthune, Douglas, Subar, Amy F., Shumakovich, Marina, Freedman, Laurence S., Thompson, Frances E., and Kipnis, Victor
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LONGITUDINAL method ,NUTRITIONAL assessment ,EPIDEMIOLOGY research methodology ,SURVEYS ,CALIBRATION ,COMPARATIVE studies ,DISEASES ,DOSE-response relationship in biochemistry ,FOOD ,FOOD composition ,INGESTION ,INTERNET ,NUTRITIONAL requirements ,POWER (Social sciences) ,QUESTIONNAIRES ,REGRESSION analysis ,RESEARCH evaluation ,RESEARCH funding ,SELF-evaluation ,SAMPLE size (Statistics) ,MEASUREMENT errors ,SECONDARY analysis ,CONTENT mining ,MEMORY bias - Abstract
With the advent of Internet-based 24-hour recall (24HR) instruments, it is now possible to envision their use in cohort studies investigating the relation between nutrition and disease. Understanding that all dietary assessment instruments are subject to measurement errors and correcting for them under the assumption that the 24HR is unbiased for usual intake, here the authors simultaneously address precision, power, and sample size under the following 3 conditions: 1) 1–12 24HRs; 2) a single calibrated food frequency questionnaire (FFQ); and 3) a combination of 24HR and FFQ data. Using data from the Eating at America’s Table Study (1997–1998), the authors found that 4–6 administrations of the 24HR is optimal for most nutrients and food groups and that combined use of multiple 24HR and FFQ data sometimes provides data superior to use of either method alone, especially for foods that are not regularly consumed. For all food groups but the most rarely consumed, use of 2–4 recalls alone, with or without additional FFQ data, was superior to use of FFQ data alone. Thus, if self-administered automated 24HRs are to be used in cohort studies, 4–6 administrations of the 24HR should be considered along with administration of an FFQ. [ABSTRACT FROM PUBLISHER]
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- 2012
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20. Using Regression Calibration Equations That Combine Self-Reported Intake and Biomarker Measures to Obtain Unbiased Estimates and More Powerful Tests of Dietary Associations.
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Freedman, Laurence S., Midthune, Douglas, Carroll, Raymond J., Tasevska, Nataša, Schatzkin, Arthur, Mares, Julie, Tinker, Lesley, Potischman, Nancy, and Kipnis, Victor
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STATISTICS methodology , *EPIDEMIOLOGY research methodology , *HYPOTHESIS , *BIOMARKERS , *CALIBRATION , *CAROTENOIDS , *DISEASES , *EPIDEMIOLOGY , *INGESTION , *LONGITUDINAL method , *MATHEMATICAL models , *POWER (Social sciences) , *REGRESSION analysis , *RESEARCH funding , *SELF-evaluation , *STATISTICS , *MATHEMATICAL variables , *VISION disorders in old age , *DATA analysis , *SECONDARY analysis , *RELATIVE medical risk , *RESEARCH bias - Abstract
The authors describe a statistical method of combining self-reports and biomarkers that, with adequate control for confounding, will provide nearly unbiased estimates of diet-disease associations and a valid test of the null hypothesis of no association. The method is based on regression calibration. In cases in which the diet-disease association is mediated by the biomarker, the association needs to be estimated as the total dietary effect in a mediation model. However, the hypothesis of no association is best tested through a marginal model that includes as the exposure the regression calibration-estimated intake but not the biomarker. The authors illustrate the method with data from the Carotenoids and Age-Related Eye Disease Study (2001--2004) and show that inclusion of the biomarker in the regression calibration-estimated intake increases the statistical power. This development sheds light on previous analyses of diet-disease associations reported in the literature. [ABSTRACT FROM PUBLISHER]
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- 2011
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21. Fitting a Bivariate Measurement Error Model for Episodically Consumed Dietary Components.
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Zhang, Saijuan, Krebs-Smith, Susan M., Midthune, Douglas, Perez, Adriana, Buckman, Dennis W., Kipnis, Victor, Freedman, Laurence S., Dodd, Kevin W., and Carroll, Raymond J
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MEASUREMENT errors ,PUBLIC health ,DIETARY supplements ,MEAT analysis ,MONTE Carlo method ,GAUSSIAN processes - Abstract
There has been great public health interest in estimating usual, i.e., long-term average, intake of episodically consumed dietary components that are not consumed daily by everyone, e.g., fish, red meat and whole grains. Short-term measurements of episodically consumed dietary components have zero-inflated skewed distributions. So-called two-part models have been developed for such data in order to correct for measurement error due to within-person variation and to estimate the distribution of usual intake of the dietary component in the univariate case. However, there is arguably much greater public health interest in the usual intake of an episodically consumed dietary component adjusted for energy (caloric) intake, e.g., ounces of whole grains per 1000 kilo-calories, which reflects usual dietary composition and adjusts for different total amounts of caloric intake. Because of this public health interest, it is important to have models to fit such data, and it is important that the model-fitting methods can be applied to all episodically consumed dietary components. We have recently developed a nonlinear mixed effects model (Kipnis, et al., 2010), and have fit it by maximum likelihood using nonlinear mixed effects programs and methodology (the SAS NLMIXED procedure). Maximum likelihood fitting of such a nonlinear mixed model is generally slow because of 3-dimensional adaptive Gaussian quadrature, and there are times when the programs either fail to converge or converge to models with a singular covariance matrix. For these reasons, we develop a Monte-Carlo (MCMC) computation of fitting this model, which allows for both frequentist and Bayesian inference. There are technical challenges to developing this solution because one of the covariance matrices in the model is patterned. Our main application is to the National Institutes of Health (NIH)-AARP Diet and Health Study, where we illustrate our methods for modeling the energy-adjusted usual intake of fish and whole grains. We demonstrate numerically that our methods lead to increased speed of computation, converge to reasonable solutions, and have the flexibility to be used in either a frequentist or a Bayesian manner. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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22. Implications of a New Dietary Measurement Error Model for Estimation of Relative Risk: Application to Four Calibration Studies.
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Kipnis, Victor, Carroll, Raymond J., Freedman, Laurence S., and Li, Li
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DISEASE risk factors ,NUTRITION research ,EPIDEMIOLOGY methodology ,MEASUREMENT errors ,STATISTICAL models ,REGRESSION analysis - Abstract
Food records or 24-hour recalls are currently used to calibrate food frequency questionnaires (FFQs) and to correct disease risks for measurement error. The standard regression calibration approach requires that these reference measures contain only random within-person errors uncorrelated with errors in FFQs. Increasing evidence suggests that records/recalls are likely to be also flawed with systematic person-specific biases, so that for any individual the average of multiple replicate assessments may not converge to her/his true usual nutrient intake. The authors propose a new measurement error model to accommodate person-specific bias in the reference measure and its correlation with systematic error in the FFQ. Sensitivity analysis using calibration data from four studies demonstrates that failure to account for person-specific bias in the reference measure can often lead to substantial underestimation of the relative risk for a nutrient. These results indicate that in the absence of information on the extent of person-specific biases in reference instruments and their relation to biases in FFQs, the adequacy of the standard methods of correcting relative risks for measurement error is in question, as is the interpretation of negative findings from nutritional epidemiology such as failure to detect an important relation between fat intake and breast cancer. Am J Epidemiol 1999; 150: 642-51. [ABSTRACT FROM PUBLISHER]
- Published
- 2009
23. Empirical Evidence of Correlated Biases in Dietary Assessment Instruments and Its Implications.
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Kipnis, Victor, Midthune, Douglas, Freedman, Laurence S., Bingham, Sheila, Schatzkin, Arthur, Subar, Amy, and Carroll, Raymond J.
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QUESTIONNAIRES -- Data processing ,FOOD ,NUTRITION education ,EPIDEMIOLOGICAL research ,MEASUREMENT errors ,URINARY organs ,NITROGEN ,FOOD diaries ,MEDICAL societies - Abstract
Multiple-day food records or 24-hour recalls are currently used as “reference” instruments to calibrate food frequency questionnaires (FFQs) and to adjust findings from nutritional epidemiologic studies for measurement error. The common adjustment is based on the critical requirements that errors in the reference instrument be independent of those in the FFQ and of true intake. When data on urinary nitrogen level, a valid reference biomarker for nitrogen intake, are used, evidence suggests that a dietary report reference instrument does not meet these requirements. In this paper, the authors introduce a new model that includes, for both the FFQ and the dietary report reference instrument, group-specific biases related to true intake and correlated person-specific biases. Data were obtained from a dietary assessment validation study carried out among 160 women at the Dunn Clinical Nutrition Center, Cambridge, United Kingdom, in 1988–1990. Using the biomarker measurements and dietary report measurements from this study, the authors compare the new model with alternative measurement error models proposed in the literature and demonstrate that it provides the best fit to the data. The new model suggests that, for these data, measurement error in the FFQ could lead to a 51% greater attenuation of true nutrient effect and the need for a 2.3 times larger study than would be estimated by the standard approach. The implications of the results for the ability of FFQ-based epidemiologic studies to detect important diet-disease associations are discussed. Am J Epidemiol 2001;153:394–403. [ABSTRACT FROM PUBLISHER]
- Published
- 2001
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24. Effect of Measurement Error on Energy-Adjustment Models in Nutritional Epidemiology.
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Kipnis, Victor, Freedman, Laurence S., Brown, Charles C., Hartman, Anne M., Schatzkin, Arthur, and Wacholder, Sholom
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EPIDEMIOLOGY ,NUTRITION ,REGRESSION analysis ,MEASUREMENT errors ,CALIBRATION ,DIET - Abstract
The use and interpretation of energy-adjustment regression models in nutritional epidemiology has been vigorously debated recently. There has been little discussion, however, regarding the effect of dietary measurement error on the performance of such models. Contrary to conventional assumptions invoked in the standard treatment of the effect of measurement error in regression analysis, reporting errors in dietary studies are usually biased, correlated with true nutrient intakes and with each other, heteroscedastic, and nonnormally distributed. Methods developed in this paper allow for this more complex error structure and are therefore more appropriate for dietary data. For practical illustration, these methods are applied to data from the Women's Health Trial Vanguard Study. The results demonstrate considerable shrinkage in the magnitude of the estimated main exposure effect in energy-adjustment models due to attenuation of the true effect and contamination from the effect of an adjusting covariate. In most cases, this shrinkage causes a sharply reduced statistical power of the corresponding significance test in comparison with measurement without error. These results emphasize the need to understand the measurement error properties of dietary instruments through validation/calibration studies and, where possible, to correct for the impact of measurement error when applying energy-adjustment models. [ABSTRACT FROM AUTHOR]
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- 1997
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25. Using Short-Term Dietary Intake Data to Address Research Questions Related to Usual Dietary Intake among Populations and Subpopulations: Assumptions, Statistical Techniques, and Considerations.
- Author
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Kirkpatrick, Sharon I., Guenther, Patricia M., Subar, Amy F., Krebs-Smith, Susan M., Herrick, Kirsten A., Freedman, Laurence S., and Dodd, Kevin W.
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STATISTICS , *NUTRITIONAL assessment , *RESEARCH methodology , *DIET , *DATA analysis , *STATISTICAL models , *SCIENTIFIC errors , *MEASUREMENT errors - Abstract
Many research questions focused on characterizing usual, or long-term average, dietary intake of populations and subpopulations rely on short-term intake data. The objective of this paper is to review key assumptions, statistical techniques, and considerations underpinning the use of short-term dietary intake data to make inference about usual dietary intake. The focus is on measurement error and strategies to mitigate its effects on estimated characteristics of population-level usual intake, with attention to relevant analytic issues such as accounting for survey design. Key assumptions are that short-term assessments are subject to random error only (i.e., unbiased for individual usual intake) and that some aspects of the error structure apply to all respondents, allowing estimation of this error structure in data sets with only a few repeat measures per person. Under these assumptions, a single 24-hour dietary recall per person can be used to estimate group mean intake; and with as little as one repeat on a subsample and with more complex statistical techniques, other characteristics of distributions of usual intake, such as percentiles, can be estimated. Related considerations include the number of days of data available, skewness of intake distributions, whether the dietary components of interest are consumed nearly daily by nearly everyone or episodically, the number of correlated dietary components of interest, time-varying nuisance effects related to day of week and season, and variance estimation and inference. Appropriate application of assumptions and recommended statistical techniques allows researchers to address a range of research questions, though it is imperative to acknowledge systematic error (bias) in short-term data and its implications for conclusions. [ABSTRACT FROM AUTHOR]
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- 2022
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26. Epidemiologic analyses with error-prone exposures: review of current practice and recommendations.
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Shaw, Pamela A., Deffner, Veronika, Keogh, Ruth H., Tooze, Janet A., Dodd, Kevin W., Küchenhoff, Helmut, Kipnis, Victor, Freedman, Laurence S., and Measurement Error and Misclassification Topic Group (TG4) of the STRATOS Initiative
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EPIDEMIOLOGY , *SCIENTIFIC observation , *MEASUREMENT errors , *AIR pollution , *PHYSICAL activity - Abstract
Purpose: Variables in observational studies are commonly subject to measurement error, but the impact of such errors is frequently ignored. As part of the STRengthening Analytical Thinking for Observational Studies Initiative, a task group on measurement error and misclassification seeks to describe the current practice for acknowledging and addressing measurement error.Methods: Task group on measurement error and misclassification conducted a literature survey of four types of research studies that are typically impacted by exposure measurement error: (1) dietary intake cohort studies, (2) dietary intake population surveys, (3) physical activity cohort studies, and (4) air pollution cohort studies.Results: The survey revealed that while researchers were generally aware that measurement error affected their studies, very few adjusted their analysis for the error. Most articles provided incomplete discussion of the potential effects of measurement error on their results. Regression calibration was the most widely used method of adjustment.Conclusions: Methods to correct for measurement error are available but require additional data regarding the error structure. There is a great need to incorporate such data collection within study designs and improve the analytical approach. Increased efforts by investigators, editors, and reviewers are needed to improve presentation of research when data are subject to error. [ABSTRACT FROM AUTHOR]- Published
- 2018
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