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The depth of squarefree powers of a squarefree monomial ideal is introduced. Let $I$ be a squarefree monomial ideal of the polynomial ring $S=K[x_1,\ldots,x_n]$. The $k$-th squarefree power $I^{[k]}$ of $I$ is the ideal of $S$ generated by those squarefree monomials $u_1\cdots u_k$ with each $u_i\in G(I)$, where $G(I)$ is the unique minimal system of monomial generators of $I$. Let $d_k$ denote the minimum degree of monomials belonging to $G(I^{[k]})$. One has $\operatorname{depth}(S/I^{[k]}) \geq d_k -1$. Setting $g_I(k) = \operatorname{depth}(S/I^{[k]}) - (d_k - 1)$, one calls $g_I(k)$ the normalized depth function of $I$. The computational experience strongly invites us to propose the conjecture that the normalized depth function is nonincreasing. In the present paper, especially the normalized depth function of the edge ideal of a finite simple graph is deeply studied.

In this paper, we study the Hankel edge ideals of graphs. We determine the minimal prime ideals of the Hankel edge ideal of labeled Hamiltonian and semi-Hamiltonian graphs, and we investigate radicality, being a complete intersection, almost complete intersection and set theoretic complete intersection for such graphs. We also consider the Hankel edge ideal of trees with a natural labeling, called rooted labeling. We characterize such trees whose Hankel edge ideal is a complete intersection, and moreover, we determine those whose initial ideal with respect to the reverse lexicographic order satisfies this property., Comment: 15 pages, 6 figures

Cycle polytopes of matroids have been introduced in combinatorial optimization as a generalization of important classes of polyhedral objects like cut polytopes and Eulerian subgraph polytopes associated to graphs. Here we start an algebraic and geometric investigation of these polytopes by studying their toric algebras, called cycle algebras, and their defining ideals. Several matroid operations are considered which determine faces of cycle polytopes that belong again to this class of polyhedral objects. As a key technique used in this paper, we study certain minors of given matroids which yield algebra retracts on the level of cycle algebras. In particular, that allows us to use a powerful algebraic machinery. As an application, we study highest possible degrees in minimal homogeneous systems of generators of defining ideals of cycle algebras as well as interesting cases of cut polytopes and Eulerian subgraph polytopes., Comment: 26 pages, 1 figure

Let $G$ be a finite simple non-complete connected graph on $\{1, \ldots, n\}$ and $\kappa(G) \geq 1$ its vertex connectivity. Let $f(G)$ denote the number of free vertices of $G$ and $\mathrm{diam}(G)$ the diameter of $G$. Being motivated by the computation of the depth of the binomial edge ideal of $G$, the possible sequences $(n, q, f, d)$ of integers for which there is a finite simple non-complete connected graph $G$ on $\{1, \ldots, n\}$ with $q = \kappa(G), f = f(G), d = \mathrm{diam}(G)$ satisfying $f + d = n + 2 - q$ will be determined. Furthermore, finite simple non-complete connected graphs $G$ on $\{1, \ldots, n\}$ satisfying $f(G) + \mathrm{diam}(G) = n + 2 - \kappa(G)$ will be classified., Comment: 10 pages, 8 figures

Let $G$ be a graph on the vertex set $[n]$ and $J_G$ the associated binomial edge ideal in the polynomial ring $S=\mathbb{K}[x_1,\ldots,x_n,y_1,\ldots,y_n]$. In this paper we investigate the depth of binomial edge ideals. More precisely, we first establish a combinatorial lower bound for the depth of $S/J_G$ based on some graphical invariants of $G$. Next, we combinatorially characterize all binomial edge ideals $J_G$ with $\mathrm{depth}\hspace{1.2mm}S/J_G=5$. To achieve this goal, we associate a new poset $\mathcal{M}_G$ with the binomial edge ideal of $G$, and then elaborate some topological properties of certain subposets of $\mathcal{M}_G$ in order to compute some local cohomology modules of $S/J_G$., Comment: 20 pages, 4 figures; final version, to appear in J. Algebraic Combin

Let $G$ be a graph on $[n]$ and $J_G$ be the binomial edge ideal of $G$ in the polynomial ring $S=\mathbb{K}[x_1,\ldots,x_n,y_1,\ldots,y_n]$. In this paper we investigate some topological properties of a poset associated to the minimal primary decomposition of $J_G$. We show that this poset admits some specific subposets which are contractible. This in turn, provides some interesting algebraic consequences. In particular, we characterize all graphs $G$ for which $\mathrm{depth}\hspace{1.2mm} S/J_G=4$., Comment: 13 pages, 3 figures, to appear in J. Algebra

Squarefree powers of edge ideals are intimately related to matchings of the underlying graph. In this paper we give bounds for the regularity of squarefree powers of edge ideals, and we consider the question of when such powers are linearly related or have linear resolution. We also consider the so-called squarefree Ratliff property., Comment: 21 pages, 6 figures

In this paper, motivated by a question posed in \cite{AH}, we introduce strongly biconvex graphs as a subclass of weakly chordal and bipartite graphs. We give a linear time algorithm to find an induced matching for such graphs and we prove that this algorithm indeed gives a maximum induced matching. Applying this algorithm, we provide a strongly biconvex graph whose (monomial) edge ideal does not admit a unique extremal Betti number. Using this constructed graph, we provide an infinite family of the so-called closed graphs (also known as proper interval graphs) whose binomial edge ideals do not have a unique extremal Betti number. This, in particular, answers the aforementioned question in \cite{AH}., Comment: 19 pages, 2 figures

Let $J_G$ be the binomial edge ideal of a graph $G$. We characterize all graphs whose binomial edge ideals, as well as their initial ideals, have regularity $3$. Consequently we characterize all graphs $G$ such that $J_G$ is extremal Gorenstein. Indeed, these characterizations are consequences of an explicit formula we obtain for the regularity of the binomial edge ideal of the join product of two graphs. Finally, by using our regularity formula, we discuss some open problems in the literature. In particular we disprove a conjecture in \cite{CDI} on the regularity of weakly closed graphs., Comment: 14 pages

We study cut algebras which are toric rings associated to graphs. The key idea is to consider suitable retracts to understand algebraic properties and invariants of such algebras like being a complete intersection, having a linear resolution, or the Castelnuovo-Mumford regularity. Throughout the paper, we discuss several examples and pose some problems as well., Comment: 32 pages

Let $X$ be an $(m\times n)$-matrix of indeterminates, and let $J$ be the ideal generated by a set $\mathcal{S}$ of maximal minors of $X$. We construct the linear strand of the resolution of $J$. This linear strand is determined by the clique complex of the $m$-clutter corresponding to the set $\mathcal{S}$. As a consequence one obtains explicit formulas for the graded Betti numbers $\beta_{i,i+m}(J)$ for all $i\geq 0$. We also determine all sets $\mathcal{S}$ for which $J$ has a linear resolution., Comment: 16 pages

We study unmixed and Cohen-Macaulay properties of the binomial edge ideal of some classes of graphs. We compute the depth of the binomial edge ideal of a generalized block graph. We also characterize all generalized block graphs whose binomial edge ideals are Cohen-Macaulay and unmixed. So that we generalize the results of Ene, Herzog and Hibi on block graphs. Moreover, we study unmixedness and Cohen-Macaulayness of the binomial edge ideal of some graph products such as the join and corona of two graphs with respect to the original graphs'., Comment: 16 pages, 5 figures, to appear in Communications in Algebra

Given finite posets $P$ and $Q$, we consider a specific ideal $L(P,Q)$, whose minimal monomial generators correspond to order-preserving maps $\phi:P\rightarrow Q$. We study algebraic invariants of those ideals. In particular, sharp lower and upper bounds for the Castelnuovo-Mumford regularity and the projective dimension are provided. Precise formulas are obtained for a large subclass of these ideals. Moreover, we provide complete characterizations for several algebraic properties of $L(P,Q)$, including being Buchsbaum, Cohen-Macaulay, Gorenstein and having a linear resolution. We also give a partial characterization for Golod property of $L(P,Q)$. Using those results, we derive applications for other important classes of monomial ideals, such as initial ideals of determinantal ideals and multichain ideals., Comment: 25 pages, 5 figures. Minor corrections, added Proposition 5.5 concerning the Golod property

We prove a conjectured upper bound for the Castelnuovo-Mumford regularity of binomial edge ideals of graphs, due to Matsuda and Murai. Indeed, we prove that $\mathrm{reg}(J_G)\leq n-1$ for any graph $G$ with $n$ vertices, which is not a path. Moreover, we study the behavior of the regularity of binomial edge ideals under the join product of graphs., Comment: arXiv admin note: substantial text overlap with arXiv:1310.6126

In this paper, we study orthogonal representations of simple graphs $G$ in $\mathbb{R}^d$ from an algebraic perspective in case $d = 2$. Orthogonal representations of graphs, introduced by Lov\'asz, are maps from the vertex set to $\mathbb{R}^d$ where non-adjacent vertices are sent to orthogonal vectors. We exhibit algebraic properties of the ideal generated by the equations expressing this condition and deduce geometric properties of the variety of orthogonal embeddings for $d=2$ and $\mathbb{R}$ replaced by an arbitrary field. In particular, we classify when the ideal is radical and provide a reduced primary decomposition if $\sqrt{-1} \not\in K$. This leads to a description of the variety of orthogonal embeddings as a union of varieties defined by prime ideals. In particular, this applies to the motivating case $K = \mathbb{R}$., Comment: 25 pages, 3 figures

In this paper it is shown that a polyomino is balanced if and only if it is simple. As a consequence one obtains that the coordinate ring of a simple polyomino is a normal Cohen-Macaulay domain., Comment: 14 pages, 12 figures

We introduce pseudo-Gorenstein rings and characterize those Hibi rings attached to a finite distributive lattice L which are pseudo-Gorenstein. The characterization is given in terms of the poset of join-irreducible elements of L. We also present a necessary condition for Hibi rings to be level. Special attention is given to planar and hyper-planar lattices. Finally the pseudo-Goresntein and level property of Hibi rings and generalized Hibi rings is compared with each other., Comment: 23 pages, 10 figures

We compute the regularity of the Hibi ring of any finite distributive lattice in terms of its poset of join irreducible elements., Comment: 5 pages, 2 figures

We classify all complete uniform multipartite hypergraphs with respect to some algebraic properties, such as being (almost) complete intersection, Gorenstein, level, $l$-Cohen-Macaulay, $l$-Buchsbaum, unmixed, and satisfying Serre's condition $S_r$, via some combinatorial terms. Also, we prove that for a complete $s$-uniform $t$-partite hypergraph $H$, vertex decomposability, shellability, sequentially $S_r$ and sequentially Cohen-Macaulay properties coincide with the condition that $H$ has $t-1$ sides consisting of a single vertex. Moreover, we show that the latter condition occurs if and only if it is a chordal hypergraph., Comment: 11 pages, To appear in Communications in Algebra

We characterize all graphs whose binomial edge ideals have pure resolutions. Moreover, we introduce a new switching of graphs which does not change some algebraic invariants of graphs, and using this, we study the linear strand of the binomial edge ideals for some classes of graphs. Also, we pose a conjecture on the linear strand of such ideals for every graph., Comment: 10 pages, 8 figures, To appear in Collectanea Math

We prove two recent conjectures on some upper bounds for the Castelnuovo-Mumford regularity of the binomial edge ideals of some different classes of graphs. We prove the conjecture of Matsuda and Murai for graphs which has a cut edge or a simplicial vertex, and hence for chordal graphs. We determine the regularity of the binomial edge ideal of the join of graphs in terms of the regularity of the original graphs, and consequently prove the conjecture of Matsuda and Murai for such a graph, and hence for complete $t$-partite graphs. We also generalize some results of Schenzel and Zafar about complete $t$-partite graphs. We also prove the conjecture due to the authors for a class of chordal graphs., Comment: 11 pages, 1 figure