14 results on '"Lynch, Thomas J."'
Search Results
2. Improved tumor vascularization after anti-VEGF therapy with carboplatin and nab-paclitaxel associates with survival in lung cancer
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Heist, Rebecca S., Duda, Dan G., Sahani, Dushyant V., Ancukiewicz, Marek, Fidias, Panos, Sequist, Lecia V., Temel, Jennifer S., Shaw, Alice T., Pennell, Nathan A., Neal, Joel W., Gandhi, Leena, Lynch, Thomas J., Engelman, Jeffrey A., and Jain, Rakesh K.
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- 2015
3. Potential of 18F-FDG PET toward personalized radiotherapy or chemoradiotherapy in lung cancer
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Choi, Noah C., Chun, Tristen T., Niemierko, Andrzej, Ancukiewicz, Marek, Fidias, Panos M., Kradin, Richard L., Mathisen, Douglas J., Lynch, Thomas J., and Fischman, Alan J.
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- 2013
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4. Effectiveness and safety of post-induction phase bevacizumab treatment for patients with non-small-cell lung cancer: results from the ARIES observational cohort study.
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Kosty, Michael, Wozniak, Antoinette, Jahanzeb, Mohammad, Leon, Larry, Fish, Susan, Hazard, Sebastien, Lynch, Thomas, Kosty, Michael P, Wozniak, Antoinette J, Hazard, Sebastien J, and Lynch, Thomas J Jr
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ANTINEOPLASTIC agents ,COMPARATIVE studies ,LONGITUDINAL method ,LUNG cancer ,LUNG tumors ,RESEARCH methodology ,MEDICAL cooperation ,RESEARCH ,EVALUATION research - Abstract
Data from randomized, controlled trials suggest that post-induction phase (IP) treatment with bevacizumab may benefit patients with advanced non-small-cell lung cancer (NSCLC). Real-world clinical practice, however, can involve variable use and patterns of treatment in broader patient populations. To assess the effect of bevacizumab on post-IP overall survival (OS) following IP chemotherapy + bevacizumab, analyses were conducted in patients enrolled in the Avastin(®) Registry--Investigation of Effectiveness and Safety (ARIES) observational cohort study (OCS) who received post-IP bevacizumab. ARIES was a large, prospective OCS of patients who received chemotherapy in combination with bevacizumab for the first-line treatment of NSCLC. This unplanned, post hoc analysis included patients who received chemotherapy and bevacizumab and who did not have progressive disease through the completion of IP treatment. A dichotomous analysis compared outcomes in patients who did and did not receive bevacizumab before a landmark date of day 30 post IP. A cumulative exposure analysis used a time-dependent Cox regression model to assess the effect of cumulative post-IP bevacizumab exposure on post-IP OS. In the dichotomous analysis, the duration of post-IP OS was significantly longer in patients who received post-IP bevacizumab; median post-IP OS was 15.6 vs. 11.3 months, respectively (hazard ratio [HR] = 0.80; 95 % confidence interval 0.71-0.91; P < 0.001). The cumulative exposure analysis observed that each additional cycle of cumulative bevacizumab exposure decreased the HR for post-IP OS by 2.7 %, on average. In conclusion, post-IP bevacizumab exposure was associated with improved post-IP OS in patients with advanced NSCLC who were enrolled in the ARIES OCS. [ABSTRACT FROM AUTHOR]
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- 2015
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5. Response to Treatment and Survival of Patients with Non-Small Cell Lung Cancer Undergoing Somatic EGFR Mutation Testing.
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Sequist, Lecia V., Joshi, Victoria A., Jänne, Pasi A., Muzikansky, Alona, Fidias, Panos, Meyerson, Matthew, Haber, Daniel A., Kucherlapati, Raju, Johnson, Bruce E., and Lynch, Thomas J.
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CANCER treatment ,SMALL cell lung cancer ,EPIDERMAL growth factor ,PROTEIN-tyrosine kinase inhibitors ,NUCLEOTIDE sequence ,GENETIC mutation - Abstract
Somatic mutations in the epidermal growth factor receptor (EGFR) gene are associated with clinical response and prolonged survival in patients with non-small cell lung cancer (NSCLC) treated with EGFR tyrosine kinase inhibitors (TKIs). We began screening patients for somatic EGFR mutations by DNA sequencing as part of clinical care in 2004. We performed a retrospective cohort study of 278 patients with NSCLC referred for EGFR testing over a 10-month period. Tumor samples underwent direct DNA sequence analyses of EGFR exons 18 through 24. We determined the clinical characteristics and EGFR mutation status of the patients and analyzed their response to therapy and survival. EGFR somatic mutations were identified in 68 (24%) of patients. A minimal smoking history was the strongest clinical predictor of harboring a mutation. In multivariable analyses, each pack-year of smoking corresponded to a 5% decreased likelihood of having an EGFR mutation. Among 92 patients with unresectable disease undergoing subsequent systemic therapy, EGFR mutations were associated with an increased response rate to EGFR TKIs (p < .0001) but not chemotherapy. Overall survival was significantly prolonged in EGFR mutation-positive patients (p = .001), with a median survival of 3.1 years compared with 1.6 years in mutation-negative patients, after adjusting for age, gender, and stage at diagnosis. Integrating molecular profiling into clinical care is feasible in NSCLC patients and provides useful clinical information. [ABSTRACT FROM AUTHOR]
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- 2007
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6. Manganese superoxide dismutase alanine-to-valine polymorphism at codon 16 and lung cancer risk.
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Wang, Lisa I., Miller, David P., Yang Sai, Liu, Geoffrey, Li Su, Wain, John C., Lynch, Thomas J., Christiani, David C., Wang, L I, Miller, D P, Sai, Y, Liu, G, Su, L, Wain, J C, Lynch, T J, and Christiani, D C
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SUPEROXIDE dismutase ,LUNG cancer ,REACTIVE oxygen species ,AGE distribution ,ALANINE ,ALLELES ,COMPARATIVE studies ,GENES ,GENETIC polymorphisms ,LUNG tumors ,RESEARCH methodology ,MEDICAL cooperation ,PROTEINS ,RESEARCH ,SEX distribution ,VALINE ,EVALUATION research ,RELATIVE medical risk ,CASE-control method ,STATISTICAL models ,ODDS ratio ,GENOTYPES - Abstract
Examines the role of manganese superoxide dismutase on the development of lung cancer. Observation of the reactive oxygen species; Identification of cell death; Assessment of the cellular metabolism.
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- 2001
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7. Anaplastic Lymphoma Kinase Inhibition in Non–Small-Cell Lung Cancer.
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Kwak, Eunice L., Yung-Jue Bang, Camidge, D. Ross, Shaw, Alice T., Solomon, Benjamin, Maki, Robert G., Ou, Sai-Hong I., Dezube, Bruce J., Jänne, Pasi A., Costa, Daniel B., Varella-Garcia, Marileila, Woo-Ho Kim, Lynch, Thomas J., Fidias, Panos, Stubbs, Hannah, Engelman, Jeffrey A., Sequist, Lecia V., WeiWei Tan, Gandhi, Leena, and Mino-Kenudson, Mari
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GENES , *LYMPHOMAS , *LUNG cancer , *TUMORS , *CLINICAL trials , *MOLECULES , *CANCER patients - Abstract
Background: Oncogenic fusion genes consisting of EML4 and anaplastic lymphoma kinase (ALK) are present in a subgroup of non–small-cell lung cancers, representing 2 to 7% of such tumors. We explored the therapeutic efficacy of inhibiting ALK in such tumors in an early-phase clinical trial of crizotinib (PF-02341066), an orally available small-molecule inhibitor of the ALK tyrosine kinase. Methods: After screening tumor samples from approximately 1500 patients with non–small-cell lung cancer for the presence of ALK rearrangements, we identified 82 patients with advanced ALK-positive disease who were eligible for the clinical trial. Most of the patients had received previous treatment. These patients were enrolled in an expanded cohort study instituted after phase 1 dose escalation had established a recommended crizotinib dose of 250 mg twice daily in 28-day cycles. Patients were assessed for adverse events and response to therapy. Results: Patients with ALK rearrangements tended to be younger than those without the rearrangements, and most of the patients had little or no exposure to tobacco and had adenocarcinomas. At a mean treatment duration of 6.4 months, the overall response rate was 57% (47 of 82 patients, with 46 confirmed partial responses and 1 confirmed complete response); 27 patients (33%) had stable disease. A total of 63 of 82 patients (77%) were continuing to receive crizotinib at the time of data cutoff, and the estimated probability of 6-month progression-free survival was 72%, with no median for the study reached. The drug resulted in grade 1 or 2 (mild) gastrointestinal side effects. Conclusions: The inhibition of ALK in lung tumors with the ALK rearrangement resulted in tumor shrinkage or stable disease in most patients. (Funded by Pfizer and others; ClinicalTrials.gov number, NCT00585195.) N Engl J Med 2010;363:1693-703. [ABSTRACT FROM AUTHOR]
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- 2010
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8. EGFR Mutations and Sensitivity to Gefitinib.
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Haber, Daniel A., Bell, Daphne W., and Lynch, Thomas J.
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LETTERS to the editor , *LUNG cancer - Abstract
A letter to the editor is presented in response to the article "EGFR Mutations and Sensitivity to Gefitinib," by Dr. Lynch and colleagues in the May 20, 2004 issue.
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- 2004
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9. Detection of Mutations in EGFR in Circulating Lung-Cancer Cells.
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Maheswaran, Shyamala, Sequist, Lecia V., Nagrath, Sunitha, Ulkus, Lindsey, Brannigan, Brian, Collura, Chey V., Inserra, Elizabeth, Diederichs, Sven, Iafrate, A. John, Bell, Daphne W., Digumarthy, Subba, Muzikansky, Alona, Irimia, Daniel, Settleman, Jeffrey, Tompkins, Ronald G., Lynch, Thomas J., Toner, Mehmet, and Haber, Daniel A.
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CANCER patients , *GENETIC polymorphisms , *DRUG resistance , *GENETIC mutation , *GROWTH factors , *LUNG cancer - Abstract
Background: The use of tyrosine kinase inhibitors to target the epidermal growth factor receptor gene (EGFR) in patients with non–small-cell lung cancer is effective but limited by the emergence of drug-resistance mutations. Molecular characterization of circulating tumor cells may provide a strategy for noninvasive serial monitoring of tumor genotypes during treatment. Methods: We captured highly purified circulating tumor cells from the blood of patients with non–small-cell lung cancer using a microfluidic device containing microposts coated with antibodies against epithelial cells. We performed EGFR mutational analysis on DNA recovered from circulating tumor cells using allele-specific polymerase-chain-reaction amplification and compared the results with those from concurrently isolated free plasma DNA and from the original tumor-biopsy specimens. Results: We isolated circulating tumor cells from 27 patients with metastatic non–small-cell lung cancer (median number, 74 cells per milliliter). We identified the expected EGFR activating mutation in circulating tumor cells from 11 of 12 patients (92%) and in matched free plasma DNA from 4 of 12 patients (33%) (P=0.009). We detected the T790M mutation, which confers drug resistance, in circulating tumor cells collected from patients with EGFR mutations who had received tyrosine kinase inhibitors. When T790M was detectable in pretreatment tumor-biopsy specimens, the presence of the mutation correlated with reduced progression-free survival (7.7 months vs. 16.5 months, P<0.001). Serial analysis of circulating tumor cells showed that a reduction in the number of captured cells was associated with a radiographic tumor response; an increase in the number of cells was associated with tumor progression, with the emergence of additional EGFR mutations in some cases. Conclusions: Molecular analysis of circulating tumor cells from the blood of patients with lung cancer offers the possibility of monitoring changes in epithelial tumor genotypes during the course of treatment. N Engl J Med 2008;359:366-77. [ABSTRACT FROM AUTHOR]
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- 2008
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10. Second hand smoke, age of exposure and lung cancer risk
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Asomaning, Kofi, Miller, David P., Liu, Geoffrey, Wain, John C., Lynch, Thomas J., Su, Li, and Christiani, David C.
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SMOKING , *LUNG cancer , *CANCER risk factors , *CIGARETTE smokers - Abstract
Summary: Background: Exposure to second hand smoke (SHS) has been identified as a risk factor for lung cancer for three decades. It is also known that the lung continues to grow from birth to adulthood, when lung growth stops. We hypothesize that after adjusting for active cigarette smoking, if SHS exposure took place during the period of growth, i.e. in the earlier part of life (0–25 years of age) the risk of lung cancer is greater compared to an exposure occurring after age 25. Method: Second hand smoke exposure was self-reported for three different activities (leisure, work and at home) for this study population of 1669 cases and 1263 controls. We created variables that captured location of exposure and timing of first exposure with respect to a study participant''s age (0–25, >25 years of age). Multiple logistic regressions were used to study the association between SHS exposure and lung cancer, adjusting for age, gender and active smoking variables. Result: For study participants that were exposed to SHS at both activities (work and leisure) and compared to one or no activity, the adjusted odds ratio (AOR) for lung cancer was 1.30 (1.08–1.57) when exposure occurred between birth and age 25 and 0.66 (0.21–1.57) if exposure occurred after age 25 years. Respective results for non-smokers were 1.29 (0.82–2.02) and 0.87 (0.22–3.38), and current and ex-smokers combined 1.28 (1.04–1.58) and 0.66 (0.15–2.85). Conclusion: All individuals exposed to SHS have a higher risk of lung cancer. Furthermore, this study suggests that subjects first exposed before age 25 have a higher lung cancer risk compared to those for whom first exposure occurred after age 25 years. [Copyright &y& Elsevier]
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- 2008
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11. Smoking cessation before diagnosis and survival in early stage non-small cell lung cancer patients
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Zhou, Wei, Heist, Rebecca Suk, Liu, Geoffrey, Park, Sohee, Neuberg, Donna S., Asomaning, Kofi, Wain, John C., Lynch, Thomas J., and Christiani, David C.
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SMOKING , *LUNG cancer , *SMALL cell lung cancer , *CIGARETTE smokers - Abstract
Summary: Smoking cessation decreases the risk of lung cancer. However, little is known about how smoking cessation affects lung cancer survival. We examined the association between smoking cessation and overall survival (OS) and recurrence-free survival (RFS) in 543 early stage non-small cell lung cancer (NSCLC) patients. The data were analyzed using log-rank test and Cox proportional hazard models, adjusting for age, gender, stage, and smoking intensity. The median follow-up time was 57 months (range 0.2–140 months). There were 191 recurrences and 285 deaths. The 5-year OS rates were 50% (95% confidence interval (CI), 43–58%) for current smokers, 54% (44–65%) for ex-smokers who quit 1–8 years, 59% (49–70%) for ex-smokers who quit 9–17 years, 58% (47–69%) for ex-smokers who quit ≥18 years prior to diagnosis, and 76% (63–90%) for never smokers (P =0.09, log-rank test). The adjusted hazard ratios for ex-smokers who quit 1–8, 9–17, ≥18 years, and never smokers were 0.82 (95% CI, 0.59–1.13), 0.69 (0.49–0.97), 0.66 (0.45–0.95), and 0.54 (0.29–0.996), respectively, when compared with current smokers (P trend =0.004). Similar associations were found among ever smokers-only, when smoking cessation time was treated as a continuous variable, and for RFS. The significantly beneficial effects of smoking cessation on OS and RFS were observed among women only, while not among men (P =0.01 for interactions between gender and smoking cessation). In conclusion, smoking cessation is associated with improved survival in early stage NSCLC patients. The longer the time since cessation of smoking, the better the survival outcome. [Copyright &y& Elsevier]
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- 2006
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12. MPO and SOD2 polymorphisms, gender, and the risk of non-small cell lung carcinoma
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Liu, Geoffrey, Zhou, Wei, Wang, Lisa I., Park, Sohee, Miller, David P., Xu, Li Lian, Wain, John C., Lynch, Thomas J., Su, Li, and Christiani, David C.
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LUNG cancer , *GENETIC polymorphisms , *SEX hormones , *STEROID hormones , *GENETIC research - Abstract
Manganese superoxide dismutase (SOD2) and myeloperoxidase (MPO) are polymorphic enzymes involved in reactive oxidative species metabolism. In this case-control study (830 non-small cell lung carcinoma (NSCLC) patients; 1119 controls) we evaluated whether the MPO -G463A polymorphism (associated with a novel estrogen receptor binding site) modifies the association between the SOD2 Ala16Val polymorphism and NSCLC risk differently by gender. For women carrying the MPO variant genotypes, the adjusted odds ratio of the SOD2 polymorphism (Val/Val vs. Ala/Ala) was 3.26 (95% CI, 1.55–6.83). No associations were found in men or in women carrying the MPO GG wildtype genotype. [Copyright &y& Elsevier]
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- 2004
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13. P53 (codon 72) and P21 (codon 31) polymorphisms alter in vivo mRNA expression of p21
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Su, Li, Sai, Yang, Fan, Rong, Thurston, Sally W., Miller, David P., Zhou, Wei, Wain, John C., Lynch, Thomas J., Liu, Geoffrey, and Christiani, David C.
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LUNG cancer , *GENETIC polymorphisms - Abstract
p21 (Waf1/Cip1) is a downstream target of p53. We evaluated the association between p21 polymorphism (codon 31), p53 polymorphism (codon 72) and their corresponding in vivo mRNA expression. In this study, p21 and p53 genetic polymorphisms (using standard PCR-RFLP techniques) and p21 and p53 gene expressions (using a radiolabelled ribonuclease protection assay (RPA) technique) were evaluated in the peripheral leukocytes of 84 individuals (63 with lung cancer). Log-transformed values of mRNA expression by RPA, which approximated a normal distribution, were analyzed. p53 genotypes did not correlate with p53 mRNA log-expression (P>0.05 for all comparisons), but the Pro allele variants of p53 were associated with a significant decrease in mRNA log-expression of its downstream target, p21. The variant Arg allele of p21 was also associated with a significant decrease in p21 mRNA log-expression. When individuals with at least one variant allele of both p53 and p21 (double-variants) were compared with all other genotype groups, these double-variants had significantly lower log-expression of p21 (P<0.005 by both t-tests (crude) and linear regression analyses (adjusted)). This is translated into an approximate 48% reduction in the geometric mean of the mRNA expression of the double-variants, when compared with all other groups. Results were consistent in both patients with lung cancer (n=63) and in normal controls (n=21). In conclusion, the presence of a p53 Pro allele and/or p21 Arg allele is associated with lower downstream target gene expression of p21. [Copyright &y& Elsevier]
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- 2003
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14. FDG–PET in staging and restaging non-small cell lung cancer after neoadjuvant chemoradiotherapy: correlation with histopathology
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Ryu, Jin-Sook, Choi, Noah C., Fischman, Alan J., Lynch, Thomas J., and Mathisen, Douglas J.
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RADIOTHERAPY , *LUNG cancer - Abstract
This study was performed to investigate the utility of FDG–PET for: (1) initial staging, and (2) restaging of the primary and mediastinal nodal lesions 2 weeks after the completion of preoperative chemoradiotherapy in patients with stage III non-small cell lung cancer (NSCLC). Twenty-six patients with histologically confirmed stage III NSCLC were accrued to this study from April 1993 to July 1998. They included 21 with stage IIIA (N2) NSCLC who were enrolled into an institutional phase II study, and 5 patients with a highly selected subset of stage IIIB disease characterized by the presence of microscopic metastatic disease in contralateral mediastinal lymph nodes who were also treated with preoperative chemoradiotherapy; N3 lesions (n=3) and minimal T4 lesions. Demographic characteristics included median age 62 years (a range from 47 to 73) and gender ratio of male 15 to female 11. Histologic types of tumor consisted of squamous cell carcinoma 6, adenocarcinoma 11, large cell carcinoma 5, and non-small cell carcinoma 4. All patients had FDG–PET imaging of the chest before the initiation and 2 weeks after completion of preoperative therapy. The FDG–PET images were evaluated qualitatively for uptake at the primary tumor sites and mediastinal lymph nodes. Standard uptake values (SUVs) were also calculated for the primary tumors and all PET findings were correlated with surgical histopathologic data. Preoperative chemoradiotherapy resulted in complete pathologic response in 8 of 26 primary lesions. By qualitative analysis, 96% of these tumors showed level 3 or 4 uptake before preoperative chemoradiotherapy. After chemoradiotherapy, 57% (15/26) of patients showed at least a one level decrease in uptake, and the sensitivity and specificity of FDG–PET for differentiating residual tumor from pathologic complete response were 67% (12/18) and 63% (5/8). Mean SUV was 14.87±7.11 at baseline and decreased to 5.72±3.35 after chemoradiotherapy (n=21, P<0.00001). When a value of 3.0 was used as the SUV cut-off, sensitivity and specificity were 88 and 67%, respectively. The mean values of visual intensity were 3.87±0.35 and 3.8±0.51 for patients who achieved pathologic complete response (n=8) and for those who showed residual cancer after the preoperative therapy (n=18), respectively. The mean SUVs were 16.97±8.52 and 14.03±6.61 for patients who achieved pathologic complete response (n=6) and for those who showed residual cancer (n=15) after the preoperative therapy, respectively. Therefore, the degree of FDG uptake before preoperative chemoradiotherapy did not provide predictive value for subsequent tumor response. For mediastinal initial staging, the sensitivity and specificity of FDG–PET were 75 and 90.5%. The sensitivity and specificity of FDG–PET for mediastinal restaging were 58.0 and 93.0%. These results indicate that FDG–PET is useful for monitoring the therapeutic effect of neoadjuvant chemoradiotherapy in patients with stage III NSCLC. For the primary lesions, SUV based analysis has high sensitivity but limited specificity for detecting residual tumor. In contrast, for restaging of mediastinal lymph nodes, FDG–PET is highly specific, but has limited sensitivity. [Copyright &y& Elsevier]
- Published
- 2002
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