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Recent work has highlighted the large role of methane emissions from the Sudd wetland and surrounding ecosystems on the global atmospheric growth rate of methane since 2010. These emissions are driven by high rainfall over basin catchments linked with the positive phase of the Indian Ocean Dipole. We reconstruct flood inundation for the Sudd wetland over a 38-year period at a spatial resolution of 30 m using a new satellite Earth Observation (EO) wetland mapping tool. We reveal considerable changes in the wet season extent of the wetland, including an increase >300% since 2019 compared to the median 1984–2022 extent. We report major increases in flood extent within grassland-dominated floodplains outside of the area currently defined Sudd wetland region. These year-to-year changes in wetland extent are corroborated with total water storage anomalies inferred from satellite data (Pearson correlation R = 0.92), Lake Victoria levels ( R = 0.73), and anomalies in reported annual mean global methane growth rates since 2009 ( R = 0.88). Our analysis shows that flood water inundation is dominated by inundated vegetation and aquatic vegetation, accounting for an average of 40% and 50% of total extent, respectively, compared to open water that accounted for just 9% of inundation in a typical year. This is consistent with recent studies that report wetland methane emissions are focused on areas with inundated vegetation. Our findings also support recent studies that highlight the significant role of the Sudd wetland in driving anomalously large global atmospheric annual growth rates, 2020–2022. By capturing high resolution information on inundated vegetation, our EO wetland mapping tool has significant potential for improved wetland emission estimates of methane. Vascular plants common in the Sudd wetland, e.g. macrophytes including Phragmites Australis and Cyperus Papyrus , seem to play a key role in methane emissions and we recommend they should be the focus of future research.

Knowledge of the location and extent of surface water and inundated vegetation is vital for a range of applications including flood risk management, biodiversity monitoring, quantifying greenhouse gas emissions, and mapping water-borne disease risk. Here, we present a new tool, TropWet, which enables users of all abilities to map wetlands in herbaceous dominated regions based on simple unmixing of optical Landsat satellite imagery in the Google Earth Engine. The results demonstrate transferability throughout the African continent with a high degree of accuracy (mean 91% accuracy, st. dev 2.6%, n = 10,800). TropWet demonstrated considerable improvements over existing globally available surface water datasets for mapping the extent of important wetlands like the Okavango, Botswana. TropWet was able to provide frequency inundation maps as an indicator of malarial mosquito aquatic habitat extent and persistence in Barotseland, Zambia. TropWet was able to map flood extent comparable to operational flood risk mapping products in the Zambezi Region, Namibia. Finally, TropWet was able to quantify the effects of the El Niño/Southern Oscillation (ENSO) events on the extent of photosynthetic vegetation and wetland extent across Southern Africa. These examples demonstrate the potential for TropWet to provide policy makers with crucial information to help make national, regional, or continental scale decisions regarding wetland conservation, flood/disease hazard mapping, or mitigation against the impacts of ENSO.