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Isospora coerebae Berto, Flausino, Luz, Ferreira Lopes, 2010 is a coccidian protozoan described from bananaquits Coereba flaveola (Linnaeus, 1758), on Marambaia Island, which is located on the southeastern Brazilian coast. In this current work, I. coerebae is identified from C. flaveola in a protected area close to Marambaia Island, but on the mainland, establishing a new location of parasitism, in addition to providing a preliminary genotypic characterization via sequencing of two regions of the mitochondrial cytochrome c oxidase subunit 1 (COI) gene. Its oocysts are sub-spherical, 24.4 22.9 m, with smooth, bilayered wall, ~1.7 m thick. Micropyle, polar granules and oocyst residuum are absent. Sporocysts are elongate ovoidal, 17.6 10.5 m. Stieda body prominent and rounded and sub-Stieda body short and wide. Sporocyst residuum is composed of scattered granules of different sizes. Sporozoites are vermiform with a prominent posterior refractile body. The oocysts of the current work are morphologically equivalent to the original description of I. coerebae, which have a typical and easily identifiable morphology, mainly in the Stieda and Sub-Stieda bodies. The two sequenced gene regions of the COI gene approximated I. coerebae to Isospora spp. from Southeastern Brazil, but also from Isospora spp. from passerines of North America, Europe and Asia. Although there is a small overlap between the two genic regions sequenced in the current work, it is estimated that the longer COI sequence, which was recently designed and still not widespread, should show better phylogenetic results in the future.

In the present study Isospora feroxis Berto, Luz, Flausino, Ferreira & Lopes, 2009 is redescribed from the photosyntypes and from new samples from a short-crested flycatcher Myiarchus ferox (Gmelin), which is the type-host in the type-locality, the Marambaia Island in Southeastern Brazil. In addition, the yellow-olive flycatcher Tolmomyias sulphurescens Spix is recorded as a new host for this species, in a new locality, the Itatiaia National Park, in the interior of Southeastern Brazil, providing a preliminary genotypic characterization via sequencing of the mitochondrial cytochrome c oxidase subunit 1 (COI) gene. Micropyle and rough oöcyst wall are added to the description of I. feroxis, in addition to other details. This is the sixth species identified from suboscine birds (Tyranni) to have a COI gene sequence deposited in GenBank and, although it is not yet possible to make conclusions on the phylogeny of Isospora spp. from Passeriformes by the COI gene, the molecular analysis confirmed the differences between coccidian species from tyrant-flycatchers., (© 2021. The Author(s), under exclusive licence to Springer Nature B.V.)

Woodcreepers are passerines of the family Dendrocolaptidae, which have a high forest dependency. The current work aimed to redescribe Isospora striata McQuistion et al. 1997, from two new hosts in protected areas in Brazil, revealing new localities of parasitism, in addition to providing preliminary genotypic identifications via sequencing of the mitochondrial cytochrome c oxidase subunit 1 (COI) gene from both host species. Isospora striata has oocysts that are subspheroidal to ovoidal, 19.4 × 16.8 μm with smooth wall. Oocyst residuum is absent, but micropyle and polar granules are present. Sporocysts are ovoidal, 13.6 × 8.3 μm, with both Stieda and sub-Stieda bodies. Sporocyst residuum is present and sporozoites with refractile body, nucleus, and striations. The morphological study and the 100% similarity in sequencing of the COI gene between samples of different dendrocolaptid species confirmed the identification of a single species, supporting the identification of I. striata in the Brazilian Atlantic forest and consequently the wide distribution of this coccidian species in the Neotropical Region.

Background: Coccidia are obligatory intracellular parasites with at least one intestinal phase in their life cycles, being Isospora Schneider, 1881 the main coccidian genus related to the order Passeriformes. However, there is no record of isosporans from the passerine family Tityridae, which is the family of the greenish schiffornis Schiffornis virescens (Lafresnaye, 1838)., Purpose: This study aimed to examine the faeces from a greenish schiffornis S. virescens captured in the Itatiaia National Park, State of Rio de Janeiro, Southeastern Brazil, to determine what coccidian parasites were present., Methods: Only one specimen of Schiffornis virescens was captured with mist nets. Coccidian oocysts were recovered from the fecal samples by flotation in Sheather's saturated solution. Morphological observations, line drawings, photomicrographs and measurements were made in optical microscopy and digitally edited. The molecular analysis included the study of the sequence of the mitochondrial cytochrome c oxidase subunit 1 (COI) gene, with phylogenetic reconstructions based on the Neighbor-Joining and Maximum Likelihood analysis., Results: An Isospora sp. considered as new to science is described and identified from Schiffornis virescens (Lafresnaye, 1838). Isospora oliveirai n. sp. has oocysts that are subspheroidal, 26.0 × 24.8 μm, with rough, bilayered wall, c.2.5 μm thick. Micropyle and oocyst residuum absent, but one to six polar granules are present. Sporocysts lemon-shaped, 18.1 × 10.9 μm. The Stieda body is knob-like to half-moon-shaped and sub-Stieda is rounded. Sporocyst residuum is present, composed of scattered spherules of different sizes. Sporozoites are vermiform, with refractile bodies and nucleus. Molecular analysis at the COI gene exhibited similarity of 97% with Isospora serinuse Yang, Brice, Elliot et Ryan, 2015 from island canaries Serinus canaria (Linnaeus, 1758), and Isospora spp. from great tits Parus major (Linnaeus, 1758) and European robins Erithacus rubecula (Linnaeus, 1758)., Conclusion: Based on the morphological and molecular features, I. oliveirai is considered as new to science and the first coccidian species recorded from Tityridae.

Isospora parnaitatiaiensis Silva, Rodrigues, Lopes, Berto, Luz, Ferreira & Lopes, 2015 was identified from a new host, the plain antvireo Dysithamnus mentalis (Temminck), and also from the white-shouldered fire-eye Pyriglena leucoptera Vieillot, in its type-locality, the Itatiaia National Park in the southeastern Brazil, and a preliminary genotypic characterisation by sequencing the mitochondrial cytochrome c oxidase subunit 1 gene is provided. The oöcysts recovered from P. leucoptera and D. mentalis were polymorphic and have genotypic differences that were not considered sufficient for the description of new species, but only different genotypes and morphotypes of I. parnaitatiaiensis related to each host. These morphological and molecular variations were associated with a process of ongoing speciation and in adaptive development to their respective host species.

In the current work, Isospora massardi Lopes, Berto, Luz, Galvão, Ferreira & Lopes, [10] is identified from white-necked thrushes Turdus albicollis Vieillot, 1818, rufous-bellied thrushes Turdus rufiventris Vieillot, 1818 and from a new host, the yellow-legged thrush Turdus flavipes (Vieillot, 1818) in a new locality, the Itatiaia National Park, in Southeastern Brazil, providing a preliminary genotypic characterization via sequencing of the mitochondrial cytochrome c oxidase subunit 1 (COI) and 18S small subunit ribosomal RNA genes. The oocysts and sporocysts of I. massardi of the current study are morphologically similar to the original description and are uniform in the proportionality of width on length, but exhibited different patterns of size associated with each host species. Furthermore, a genotypic difference of 3% was found in the COI sequences from T. flavipes and T. albicollis. Therefore, an ecological discussion is introduced aimed at associating these morphometric and genotypic differences with an ongoing speciation process., (Copyright © 2019 Elsevier B.V. All rights reserved.)

Background: The gnateaters Conopophaga spp. are insectivorous passerines commonly observed in high and humid forests, where they remain lodged in thin branches and, sometimes, they fly to the ground to catch insects. The insectivorous feeding habit is related to low prevalence and density of coccidians in passerines; however, several coccidian species are recorded for families of insectivorous passerines., Purpose: This study aimed to examine the feces from gnateaters Conopophaga spp. captured in the municipality of Barra Mansa and in the Itatiaia National Park, State of Rio de Janeiro, Southeastern Brazil, to determine what coccidian parasites were present., Methods: Nine gnateaters were captured with mist nets. Coccidian oocysts were recovered from the fecal samples by flotation in Sheather's saturated solution. Morphological observations, line drawings, photomicrographs and measurements were made in optical microscopy and digitally edited. The molecular analysis included the study of the sequence of the mitochondrial cytochrome c oxidase subunit 1 (cox1) gene, with phylogenetic reconstructions based on the neighbor-joining and maximum likelihood analysis., Results: Four Conopophaga spp. were positive for oocysts. An Isospora sp. considered as new to science is described and identified from Conopophaga melanops (Vieillot, 1818) and Conopophaga lineata (Wied, 1831). Isospora borbai n. sp. has oocysts that are subspheroidal, 17-22 × 15-22 (20.2 × 19.1) µm, with rough, bilayered wall, c.1.7 μm thick. Micropyle present, but without micropyle cap. Oocyst residuum absent, but one or two polar granules are present. Sporocysts are ellipsoidal, 12-15 × 8-11 (14.1 × 9.1) µm. The Stieda body is knob-like to half-moon-shaped and sub-Stieda body is rounded. Sporocyst residuum is present, composed of scattered spherules of different sizes. Sporozoites are vermiform with refractile body and nucleus. Molecular analysis at the cox1 gene exhibited similarity greater than 99% with Isospora spp. isolates from other Neotropical passerine birds., Conclusion: Based on the morphological and molecular features, I. borbai is considered as new to science and the first coccidian species recorded from Conopophagidae.

Isospora sporophilae Carvalho-Filho, Meireles, Ribeiro & Lopes, 2005 was morphologically and molecularly identified from the double-collared seedeater Sporophila frontalis (Verreaux), which is categorised as 'vulnerable' by the International Union for Conservation of Nature and Natural Resources (IUCN), and from the uniform finch Haplospiza unicolor Cabanis in conserved and anthropomorphic/fragmented areas of Atlantic Forest in the southeastern Brazil. The oöcysts recovered from S. frontalis and H. unicolor had small morphological and genotypic differences that were not considered sufficient for the description of new species, but only different genotypes of I. sporophilae related to each host. This coccidian species was originally described from double-collared seedeaters Sporophila caerulescens (Vieillot) in a center screening of wild animals; therefore, this new report emphasises a potential occurrence of anthropomorphic dispersion of coccidia through illegal trade, seizures and reintroductions in the wild.

A new species of coccidia (Protozoa: Apicomplexa: Eimeriidae) found parasitizing the yellow-legged thrush Turdus flavipes (Vieillot, 1818), the pale-breasted thrush Turdus leucomelas Vieillot, 1818 and the creamy-bellied thrush Turdus amaurochalinus Cabanis, 1850 in Southeastern Brazil is described. Isospora brasilsatoae n. sp. has oocysts that are ovoidal to pyriform, 26.8 × 21.1 μm, with smooth, bilayered wall, ~1.6 μm thick. Micropyle present. Oocyst residuum absent, but one to three polar granules are present. Sporocysts are elongate ovoidal, 18.1 × 10.5 μm. Stieda body knob-like and sub-Stieda body trapezoidal. Sporocyst residuum is composed of granules that appear to be membrane-bounded. Sporozoites are vermiform with refractile bodies and striations. This is the ninth description of an Isospora sp. parasitizing a New World thrush.

In the current study, Isospora sagittulae McQuistion and Capparella, 1992 (Protozoa: Apicomplexa: Eimeriidae) is reported from white-shouldered fire-eyes Pyriglena leucoptera (Vieillot, 1818) in the Atlantic Forest in southeastern Brazil. To date, this coccidian species was described from antbirds in Ecuador and Brazilian Amazon. In this sense, oocysts and measurements of the description of I. sagittulae from Amazonian antbirds were required from the deposit for comparison between samples from the Amazon and Atlantic Forest. The morphology was similar in all aspects, despite the polymorphism associated with the oocyst shape. DNA sequences for the mitochondrial cytochrome c oxidase subunit 1 (cox1) locus of the oocysts had similarity of 100%. Therefore, these strong morphological, molecular, and ecological equivalences ensure the unique identification of I. sagittulae. Finally, this finding reveals the wide distribution of I. sagittulae in the Neotropical region and indicates that other antbirds in the Brazilian Cerrado should disperse I. sagittulae to the Amazon and Atlantic Forest.

Despite 12 coccidian species had been recorded from passerines of the Thraupidae family, none of them has been reported in the Parque Nacional do Itatiaia, in Southeastern Brazil. This locality is a protected area with a high degree of vulnerability, and is considered a "conservation island" of biodiversity. The aim of the current work was describe Isospora ramphoceli Berto, Flausino, Luz, Ferreira, Lopes, 2010 from ruby-crowned tanagers Tachyphonus coronatus Vieillot, 1822 in the Parque Nacional do Itatiaia. The oocysts of I. ramphoceli are subspheroidal, 23.1 × 22.1 μm, with smooth, bilayered wall. Micropyle, oocyst residuum and polar granule are absent. Sporocysts are ellipsoidal or ovoidal, 16.2 × 10.8 μm. Stieda body is knob-like and substieda body is large and homogeneous. Sporocyst residuum is composed of many scattered granules. Sporozoites are vermiform with a posterior refractile body and a nucleus. In addition to new locality, this is the first description of I. ramphoceli from T. coronatus.

A new coccidian species (Protozoa: Apicomplexa: Isospora) is described parasitizing white-necked thrushes Turdus albicollis Vieillot, 1818; rufous-bellied thrushes Turdus rufiventris Vieillot, 1818; pale-breasted thrushes Turdus leucomelas Vieillot, 1818; and yellow-legged thrushes Turdus flavipes Vieillot, 1818 from 3 different localities in Brazil. Isospora sabiai n. sp. has oocysts that are subspherical to ellipsoidal, 20.9 × 18.6 μm, with smooth, delicate, bilayered wall, ∼1.1 μm thick. Micropyle inconspicuous or imperceptible. Oocyst residuum absent, but small polar granules rounded or comma-shaped are present. Sporocysts are elongate ellipsoidal to reniform, 16.5 × 9.2 μm. The Stieda body is knob-like. Sub-Stieda body rounded to conical, sometimes homogeneous with the Stieda body. Sporocyst residuum is present, usually as a cluster of numerous granules. Sporozoites are vermiform with 2 refractile bodies. The oocysts and sporocysts of I. sabiai n. sp. are uniform in the proportionality of width on length, but exhibited different patterns of size associated with each host species; therefore, an ecological discussion is introduced aimed at associating these morphometrical patterns of the oocysts with the habits of the different species of thrushes. This is the seventh isosporoid coccidian reported from New World turdids.

The aim of the present study was to report and describe Isospora albicollis Lainson and Shaw, 1989 parasitizing a white-necked thrush Turdus albicollis Vieillot, 1818 and a pale-breasted thrush Turdus leucomelas Vieillot, 1818 in two different localities: the Itatiaia National Park and Cacaria, in southeastern Brazil. The oocysts identified were ovoidal, 24.4 × 19.7 μm, with a smooth, bilayered wall, around 1.4 μm thick. Oocyst residuum was absent, but a micropyle and a polar granule were present. The sporocysts were ellipsoidal, 15.4 × 10.1 μm. The Stieda body was knob-like to rounded and the sub-Stieda body was prominent and wide. Sporocyst residuum was present, usually as a cluster of granules that appear to be membrane-bounded. The sporozoites were vermiform with one posterior refractile body and a centrally located nucleus. Besides recording the new host T. leucomelas, the identification of I. albicollis in the Itatiaia National Park and Cacaria, in southeastern Brazil, provide records of new localities for its parasitism, and reveals the wide distribution and dispersion of this coccidium in Brazil.

A new species of coccidian, Isospora guaxi n. sp., and Isospora bellicosa Upton, Stamper & Whitaker, 1995 (Protozoa: Apicomplexa: Eimeriidae) are recorded from red-rumped caciques Cacicus haemorrhous (L.) in the Parque Nacional do Itatiaia, Brazil. Isospora guaxi n. sp. has sub-spheroidal oöcysts, measuring on average 30.9 × 29.0 μm, with smooth, bi-layered wall c.1.9 μm thick. Micropyle and oöcyst residuum are absent, but a polar granule is present. Sporocysts are ellipsoidal, measuring on average 19.3 × 13.8 μm. Stieda body is knob-like and sub-Stieda body is prominent and compartmentalized. Sporocyst residuum is composed of scattered granules. Sporozoites are vermiform, with one refractile body and a nucleus. Isospora bellicosa has sub-spheroidal to ovoidal oöcysts, measuring on average 27.1 × 25.0 μm, with smooth, bi-layered wall c.1.5 μm thick. Micropyle and oöcyst residuum are absent, but one or two polar granules are present. Sporocysts are ellipsoidal, measuring on average 18.1 × 10.9 μm. Stieda body is knob-like and sub-Stieda body is rounded to rectangular. Sporocyst residuum is composed of a cluster of compact or diffuse granules. Sporozoites are vermiform, with one refractile body and a nucleus. Isospora bellicosa was originally described from the Peruvian meadowlark Sturnella bellicosa deFilippi, a trans-Andean icterid which is allopatric with the cis-Andean C. haemorrhous. Therefore, in conclusion, this current study reveals the dispersion of coccidia from Icteridae across the Andes Mountains, besides describing the sixth isosporoid coccidium infecting an icterid bird.

A new isosporoid coccidian species (Protozoa: Apicomplexa: Eimeriidae) is reported from the southern house wren Troglodytes musculus, a very well distributed species in South and Central America. Isospora corruirae sp. nov. oocysts are subspherical to ovoidal, 24.1 × 21.4 μm, with smooth, bilayered wall. Micropyle and oocyst residuum are absent, but small spherules and splinter-like granules are frequently present. Sporocysts are ovoidal to piriform, 14.0 × 9.5 μm. Stieda body is prominent knob-like and substieda body is delicate. Sporocyst residuum is composed of scattered fragments of different sizes. Sporozoites are vermiform with posterior refractile bodies, anterior striations and a nucleus. This is the second description of an isosporoid coccidium infecting a New World wren.

A new coccidian species (Protozoa: Apicomplexa: Isospora) parasitizing the white-shouldered fire-eye Pyriglena leucoptera (Vieillot, 1818) is described in the Parque Nacional do Itatiaia. This park is a protected area in southeastern Brazil with a high degree of vulnerability, representing a "conservation island" of biodiversity. Isospora parnaitatiaiensis n. sp. has oocysts that are ellipsoidal, 23.8 × 19.4 μm, with smooth, bilayered wall, ~1.1 μm thick. Micropyle and oocyst residuum are absent, but one or two polar granules are present. Sporocysts are ellipsoidal, 14.6 × 9.3 μm. The Stieda body is nipple- to knob-like and sub-Stieda body rounded to rectangular. Sporocyst residuum is present, usually as a cluster of numerous granules. Sporozoites are vermiform with two refractile bodies and a nucleus. This is the second isosporoid coccidian described from antbirds (Thamnophilidae).

The New World tyrant-flycatcher (Tyrannidae) Attila rufus (Vieillot, 1819) is commonly known as grey-hooded attila or 'capitão-de-saíra' in Brazil (Sick 1997; CBRO 2014). This species has a wide distribution and their population trends appear to be stable; therefore, it is least concern according to IUCN (2015) criteria.

A new coccidian species (Protozoa: Apicomplexa: Eimeriidae) are reported from the white-necked thrush Turdus albicollis Vieillot, 1818, a very common species in South America. Isospora massardi sp. nov. oocysts are subspherical, 18.6 × 17.7 μm, with smooth, bilayered wall, ~0.9 μm. Micropyle, oocyst residuum are absent, but two polar granules are frequently present. Sporocysts are ovoidal, 14.8 × 9.3 μm. Stieda body is knob-like to rounded and substieda body is rounded. Sporocyst residuum is composed of scattered spherules of different sizes. Sporozoites are vermiform with posterior and anterior refractile bodies and a nucleus. This is the sixth description of an isosporoid coccidium infecting a New World turdid bird.

Isospora canaria Box, 1975 (Protozoa, Apicomplexa, Eimeriidae) is reported and described from canaries Serinus canaria (Linnaeus) in southeast Brazil. Its oöcysts are subspheroidal to ellipsoidal, 24.4 × 22.2 μm, with smooth, bilayered wall, ~1.2 μm. The micropyle and the oöcyst residuum are absent, but a polar granule is present. The sporocysts are lemon-shaped, 17.6 × 10.6 μm. The Stieda body is nipple-like, and substieda body is prominent and homogeneous. The sporocyst residuum is composed of scattered granules. The sporozoite has anterior and posterior refractile bodies and a nucleus. The report of this coccidium recovered from exotic canaries in South America is relevant to native passerines, mainly to Carduelis yarrellii, which are listed as vulnerable species by IUCN (International Union for Conservation of Nature and Natural Resources).

A new coccidian species (Protozoa: Apicomplexa: Eimeriidae) obtained from masked yellowthroat Geothlypis aequinoctialis (Gmelin) is reported from Brazil. Isospora piacobrai n. sp. has oöcysts which are subspheroidal to ovoidal, measure 15.8 x 10.5 microm and have a smooth, bilayered wall c. 1.2 microm thick. A micropyle and oöcyst residuum are absent, but a polar granule is present. Its sporocysts are ovoidal and measure 15.8 x 10.5 microm. The Stieda body is knob-like and prominent, the substieda body large, trapezoidal and homogeneous, and the sporocyst residuum composed of granules of different sizes. Sporozoites are vermiform with one refractile body and a nucleus. This is the first description of an isosporoid coccidian infecting a bird of the family Parulidae.

Two new coccidian (Protozoa: Apicomplexa: Eimeriidae) species from the Brazilian tanager Ramphocelus bresilius dorsalis are reported in the current study. Isospora cadimi n. sp. oocysts are spheroidal to sub-spheroidal, 24.2 x 22.9 microm, with a smooth and bi-layered wall, approximately 1.1 microm. Micropyle, oocyst residuum, and polar granule are absent. Sporocysts are broadly ovoidal, 16.9 x 11.6 microm. Stieda and substieda bodies are present. Sporocyst residuum is present and sporozoites have refractile body and nucleus. Isospora navarroi n. sp. oocysts are spheroidal to sub-spheroidal, 21.4 x 20.6 microm, with a smooth and bi-layered wall, approximately 1.1 microm. Micropyle, oocyst residuum, and polar granule are absent. Sporocysts are ellipsoidal, 16.1 x 10.2 microm. Stieda and substieda bodies are present. Sporocyst residuum is present and sporozoites have a robust posterior refractile body.

In the current study, two new coccidian species (Protozoa: Apicomplexa: Eimeriidae) obtained from short-crested flycatcher Myiarchus ferox (Gmelin) are reported from Brazil. Isospora feroxis n. sp. has oöcysts which are spheroidal to sub-spheroidal, 18.7 x 18.0 microm, with a smooth and bi-layered wall, c. 1.2 microm. The micropyle and oöcyst residuum are absent, but two polar granules are present. Its sporocysts are broadly ellipsoidal and 11.7 x 8.5 microm. Stieda and substieda bodies are present. A sporocyst residuum is present and the sporozoites have a refractile body and nucleus. Oöcysts of Eimeria sicki n. sp. are spheroidal to sub-spheroidal, 30.3 x 28.5 microm, with a smooth and bi-layered wall, c. 1.3 microm. The micropyle, oöcyst residuum and polar granule are absent. Its sporocysts are ellipsoidal, 18.4 x 10.0 microm. Stieda and substieda bodies are present. A sporocyst residuum is present and sporozoites have a refractile body and nucleus.