1. Comprehensive analysis of complement-associated molecular features in hepatocellular carcinoma
- Author
-
Run Huang, Guiqi Zhu, Xiutao Fu, Weiren Liu, Chenyang Tao, Jun Gao, Weifeng Qu, Yuan Fang, Xifei Jiang, Zhenbin Ding, Jian Zhou, Yinghong Shi, Jia Fan, and Zheng Tang
- Subjects
MicroRNAs ,Carcinoma, Hepatocellular ,Liver Neoplasms ,Biophysics ,Biomarkers, Tumor ,Humans ,General Medicine ,CD8-Positive T-Lymphocytes ,DNA Methylation ,Biochemistry - Abstract
The complement cascade plays a "complementing" role in human immunity. However, the potential roles of complement system in impacting molecular and clinical features of hepatocellular carcinoma (HCC) remain unclear. In this study, eleven public datasets are analyzed to compare the complement status between normal and cancerous samples based on 18 classical complement-associated genes. The complement scores are constructed to quantify complement signatures of individual tumors. HCC patients in the The Cancer Genome Atlas (TCGA) cohort are focused to perform systematical analyses between complement status and immune infiltration, miRNA expression, DNA methylation, clinicopathological features, and drug response. The results show that the complement scores in normal tissues are dramatically higher than those of tumor tissues. Tumor samples in the TCGA cohort are classified into complement score-low and score-high groups. Pathway analysis reveals that tumor-promoting pathways are typically inhibited in complement score-high group. This study also shows that tumor-killing immune cells, such as CD8
- Published
- 2022