1. Comparative Analyses of Copy-Number Variation in Autism Spectrum Disorder and Schizophrenia Reveal Etiological Overlap and Biological Insights
- Author
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Ryota Hashimoto, Toshiya Inada, Shuraku Son, Youta Torii, Tomoko Toyota, Yutaka Omura, Jun Egawa, Hirotaka Kosaka, Toshio Munesue, Yuto Takasaki, Masaki Kojima, Toshiya Murai, Yuichiro Watanabe, Masahide Usami, Takeo Yoshikawa, Naoko Kawano, Tokio Uchiyama, Masashi Ikeda, Yuka Yasuda, Mitsuhiro Miyashita, Daisuke Mori, Fumichika Nishimura, Toshimichi Yamamoto, Yota Uno, Kentaro Nakaoka, Ichiro Kusumi, Kyota Watanabe, Masahiro Nakatochi, Hiroki Kimura, Yasuko Funabiki, Makoto Ishitobi, Masanari Itokawa, Walid Yassin, Tsutomu Takahashi, Itaru Kushima, Yushi Inoue, Kazuhiro Yamakawa, Masaki Kodaira, Masumi Inagaki, Kiyoto Kasai, Mako Morikawa, Kanako Ishizuka, Yosuke Eriguchi, Nakao Iwata, Takashi Okada, Yukako Nakamura, Nanayo Ogawa, Yu-ichi Goto, Akiko Kobori, Tetsuro Ohmori, Naohiro Okada, Shohko Kunimoto, Maeri Yamamoto, Yuko Arioka, Hidenori Yamasue, Branko Aleksic, Makoto Arai, Shigeru Yokoyama, Hitoshi Kuwabara, Toshimitsu Suzuki, Ayako Nunokawa, Yanjie Yu, Shuji Iritani, Tomoko Shiino, Hidenaga Yamamori, Norio Ozaki, Naoki Hashimoto, Michio Suzuki, Tempei Ikegame, Ryo Kimura, Teppei Shimamura, Shusuke Numata, Tetsuya Iidaka, Emiko Shishido, Tsukasa Sasaki, Seico Benner, Toshiyuki Someya, Mamoru Tochigi, Toru Yoshikawa, and Akira Yoshimi
- Subjects
Adult ,Male ,0301 basic medicine ,Adolescent ,DNA Copy Number Variations ,Genotype ,Bioinformatics analysis ,Autism Spectrum Disorder ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,mental disorders ,Intellectual disability ,medicine ,Gene set analysis ,Humans ,Genetic Predisposition to Disease ,Copy-number variation ,Child ,lcsh:QH301-705.5 ,Genetics ,Middle Aged ,Japanese population ,medicine.disease ,Oxidative Stress ,030104 developmental biology ,lcsh:Biology (General) ,Autism spectrum disorder ,Schizophrenia ,Etiology ,Female ,030217 neurology & neurosurgery ,Genome-Wide Association Study - Abstract
Summary: Compelling evidence in Caucasian populations suggests a role for copy-number variations (CNVs) in autism spectrum disorder (ASD) and schizophrenia (SCZ). We analyzed 1,108 ASD cases, 2,458 SCZ cases, and 2,095 controls in a Japanese population and confirmed an increased burden of rare exonic CNVs in both disorders. Clinically significant (or pathogenic) CNVs, including those at 29 loci common to both disorders, were found in about 8% of ASD and SCZ cases, which was significantly higher than in controls. Phenotypic analysis revealed an association between clinically significant CNVs and intellectual disability. Gene set analysis showed significant overlap of biological pathways in both disorders including oxidative stress response, lipid metabolism/modification, and genomic integrity. Finally, based on bioinformatics analysis, we identified multiple disease-relevant genes in eight well-known ASD/SCZ-associated CNV loci (e.g., 22q11.2, 3q29). Our findings suggest an etiological overlap of ASD and SCZ and provide biological insights into these disorders. : Kushima et al. perform comparative analyses of CNVs in ASD and SCZ in a Japanese population. They identify pathogenic CNVs and biological pathways in each disorder with significant overlap. Patients with pathogenic CNVs have a higher prevalence of intellectual disability. Disease-relevant genes are detected in eight well-known ASD/SCZ-associated CNV loci. Keywords: autism spectrum disorder, schizophrenia, copy-number variation, array comparative genomic hybridization, genetic overlap, Japanese population, oxidative stress response, genome integrity, lipid metabolism, gene ontology
- Published
- 2018