1. Next-generation sequencing in patients with familial FSGS: first report of collagen gene mutations in Tunisian patients
- Author
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Elisabet Ars, Patricia Ruiz, Andrea Domingo-Gallego, T. Boudawara, Bayen Maalej, Laura Lorente-Grandoso, Faical Jarraya, Sawssan Ammar, Khawla Kammoun, Hassen Kamoun, Mohamed Ben Hmida, Marc Pybus, and Houda Kanoun
- Subjects
Adult ,Collagen Type IV ,Male ,0301 basic medicine ,Tunisia ,Mutation, Missense ,030105 genetics & heredity ,Gene mutation ,Biology ,urologic and male genital diseases ,medicine.disease_cause ,Autoantigens ,DNA sequencing ,Young Adult ,03 medical and health sciences ,Focal segmental glomerulosclerosis ,Genetics ,medicine ,Humans ,Genetic Predisposition to Disease ,Genetic Testing ,Gene ,Genetics (clinical) ,Genetic testing ,Mutation ,PLCE1 ,Proteinuria ,medicine.diagnostic_test ,Glomerulosclerosis, Focal Segmental ,Podocytes ,urogenital system ,PAX2 Transcription Factor ,Genetic Diseases, Inborn ,High-Throughput Nucleotide Sequencing ,medicine.disease ,female genital diseases and pregnancy complications ,Pedigree ,030104 developmental biology ,Female ,Collagen ,medicine.symptom - Abstract
Focal segmental glomerulosclerosis (FSGS) is a histological lesion with many causes, including inherited genetic defects, with significant proteinuria being the predominant clinical finding at presentation. FSGS is considered as a podocyte disease due to the fact that in the majority of patients with FSGS, the lesion results from defects in the podocyte structure. However, FSGS does not result exclusively from podocyte-associated genes. In this study, we used a genetic approach based on targeted next-generation sequencing (NGS) of 242 genes to identify the genetic cause of FSGS in seven Tunisian families. The sequencing results revealed the presence of eight distinct mutations including seven newly discovered ones: the c.538G>A (p.V180M) in NPHS2, c.5186G>A (p.R1729Q) in PLCE1 and c.232A>C (p.I78L) in PAX2 and five novel mutations in COL4A3 and COL4A4 genes. Four mutations (c.209G>A (p.G70D), c.725G>A (p.G242E), c.2225G>A (p.G742E), and c. 1681_1698del) were detected in COL4A3 gene and one mutation (c.1424G>A (p.G475D)) was found in COL4A4. In summary, NGS of a targeted gene panel is an ideal approach for the genetic testing of FSGS with multiple possible underlying etiologies. We have demonstrated that not only podocyte genes but also COL4A3/4 mutations should be considered in patients with FSGS.
- Published
- 2021
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