323 results on '"Di Yang"'
Search Results
2. A multifunctional non-viral vector for the delivery of MTH1-targeted CRISPR/Cas9 system for non-small cell lung cancer therapy
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Yu, Wang, Yan, Tang, Xiao-Mei, Zhao, Gui, Huang, Jin-Hong, Gong, Shu-di, Yang, Hui, Li, Wen-Jun, Wan, Chang-Hao, Jia, Gang, Chen, and Xue-Nong, Zhang
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Gene Editing ,Biomaterials ,Lung Neoplasms ,Carcinoma, Non-Small-Cell Lung ,Genetic Vectors ,Biomedical Engineering ,Humans ,DNA ,General Medicine ,CRISPR-Cas Systems ,Molecular Biology ,Biochemistry ,Biotechnology - Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 (Cas9) system adapted from bacteria is a programmable nuclease-based genome editing tool. The long-lasting effect of gene silencing or correction is beneficial in cancer treatment. Considering the need to broaden the practical application of this technology, highly efficient non-viral vectors are urgently required. We prepared a multifunctional non-viral vector that could actively target tumor cells and deliver CRISPR/Cas9 plasmids into nuclei of cancer cells. Protamine sulfate (PS) which contains nuclear localization sequence was utilized to condense plasmid DNA and facilitate nuclei-targeted delivery. Liposome-coated protein/DNA complex avoided the degradation of nuclease in blood circulation. The obtained PS@Lip/pCas9 was further modified with distearoyl phosphoethanolamine-polyethylene glycol-hyaluronic acid (HA) to endow the vector ability to actively target tumor cell. Results suggested that PS@HA-Lip could deliver CRISPR/Cas9 plasmids into nuclei of tumor cells and induce genome editing effect. With the disruption of MTH1 (mutT homolog1) gene, the growth of non-small cell lung cancer was inhibited. Moreover, cell apoptosis in tumor tissue was promoted, and liver metastasis of non-small cell lung cancer (NSCLC) was reduced. Our study has provided a therapeutic strategy targeting MTH1 gene for NSCLC therapy. STATEMENT OF SIGNIFICANCE: CRISPR/Cas9 as a powerful tool for genome editing has drawn much attention. The long-lasting effect possesses unique advantage in cancer treatment. Non-viral vectors have high loading capacity, high safety and low immunogenicity, playing an important role in CRISPR/Cas9 delivery. In our study, a multifunctional non-viral vector for the efficient delivery of CRISPR/Cas9 plasmid was constructed. With the active targeting ligand and nuclei-targeting component, the cargo was efficiently delivered into cell nuclei and exerted genome editing effect. By using this vector, we successfully inhibited the growth and induced the apoptosis of non-small cell lung cancer by disrupting MTH1 expression with good safety. Our work provided an efficient non-vial vector for CRISPR/Cas9 delivery and explored the possibility for cancer treatment.
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- 2022
3. Antiviral activities of Polygonum perfoliatum L. extract and related phenolic acid constituents against hepatitis B virus
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Zhuohang Chen, Yan Yuan, Di Yang, Minhui Luo, Qian Liang, Zan Li, Siya Lu, Jianan Sun, Maohua Deng, Miaoya Liu, Zongsuo Liang, and Kuancheng Liu
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Hepatitis B virus ,Water ,Hepatitis B ,Virus Replication ,Antiviral Agents ,Anti-Bacterial Agents ,Hepatitis B, Chronic ,Infectious Diseases ,Gallic Acid ,Virology ,DNA, Viral ,Hydroxybenzoates ,Humans ,RNA ,Hepatitis B e Antigens ,Polygonum ,DNA, Circular - Abstract
Chronic hepatitis B virus (HBV) infection is an important public health problem. Polygonum perfoliatum L. is a traditional medicinal herb and has been reported to have pharmacological activities such as anti-inflammatory, antibacterial, and antiviral. In this study, the antiviral activities and mechanisms of Polygonum perfoliatum L. extract against HBV and the effective components were investigated. The results showed that the total extract of Polygonum perfoliatum L. reduced the levels of HBV e antigen (HBeAg) secretion and the viral covalently closed circular DNA (CCC DNA) formation, but had little or no negative effects on viral capsid assembly and pregenomic RNA packaging. Further fractionation showed that the water extract (WE) fraction exerted comparable anti-HBV activities with the total extract, especially in inhibiting the CCC DNA formation and HBeAg production, indicating that the effective antiviral components are mainly distributed in this fraction. Further study showed that the phenolic acids constituents, protocatechuic acid, and gallic acid, but not ethyl caffeate, which is reported enriched in the WE fraction, showed strong anti-HBV activities in inhibiting viral core DNA synthesis, CCC DNA formation, and HBeAg production. These results suggested that the Polygonum perfoliatum L. total extract and the related phenolic acids like protocatechuic acid and gallic acid could inhibit HBV replication and also indicated the potential utility of Polygonum perfoliatum L. and related constituents as sources of novel antivirals against HBV.
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- 2022
4. A Study on Credit Data-Based Poverty Alleviation in Rural Yunnan, China
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Song Deng, Di Yang, Zhaoli Gao, Zhen Yuan, and Chenghui Yao
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Rural Population ,China ,Financial Management ,Article Subject ,General Computer Science ,General Mathematics ,General Neuroscience ,Income ,Humans ,General Medicine ,Poverty - Abstract
The main path of development credit funds in rural poverty alleviation in Y province is crucial. This paper studies the rural poverty alleviation work in extreme poverty areas in Yunnan and puts forward targeted and instructive policy suggestions for specific difficult areas. Research the relationship between credit resource allocation and rural poverty alleviation. The existing research is mainly based on the relationship between financial development and economic growth, income growth, income distribution, and, on the surface, the relationship between the scale of financial development and the efficiency of financial development and other indicators. The purpose is to put forward targeted measures and suggestions on the basis of theoretical research and model analysis to help the Yunnan banking industry support poverty alleviation. The results of the study show that there is a causal relationship between agriculture-related loans.
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- 2022
5. Cervical lymph node dissection on the treatment of cervical tuberculosis
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Qibin Liu, Xianxiang Chen, Xiaoyu Liu, Di Yang, Ting Li, Liqing Jiang, Desheng Ji, and Xiyong Dai
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Microbiology (medical) ,Infectious Diseases ,Humans ,Lymph Node Excision ,Neck Dissection ,Tuberculosis ,Lymph Nodes ,Retrospective Studies - Published
- 2022
6. The inhibitory effects of Dulaglutide on cellular senescence against high glucose in human retinal endothelial cells
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Shen Nian, Yajing Mi, Kai Ren, Shanwei Wang, Mingkai Li, and Di Yang
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Cancer Research ,Glucose ,Sirtuin 1 ,Recombinant Fusion Proteins ,Plasminogen Activator Inhibitor 1 ,Glucagon-Like Peptides ,Endothelial Cells ,Humans ,Cell Biology ,Telomerase ,Cells, Cultured ,Cellular Senescence ,Immunoglobulin Fc Fragments - Abstract
Diabetic nephropathy is one of the most important chronic microvascular complications of diabetes, and its main feature is diabetic glomerulosclerosis. Endothelial sirtuin 1 (SIRT1) expression is related to aging, and reducing SIRT1 expression promotes endothelial cell aging. Plasminogen activator inhibitor-1 (PAI-1) can be synthesized in a variety of cells, such as endothelial cells. Dulaglutide is a glucagon-like peptide-1 (GLP-1) drug, and it can activate the GLP-1 receptor and promote the conversion of intracellular adenosine triphosphate to adenylate cyclase, thereby activating phosphokinase A, and regulating blood glucose levels effectively in the body. We analyzed the effects of Dulaglutide on inhibiting cell senescence by studying the effects of its different concentrations on telomerase activity and senescence-related gene expression. Our results suggest that Dulaglutide can alleviate high-glucose-induced oxidative stress in human retinal endothelial cells by restoring the expressions of SIRT1 and endothelial nitric oxide synthase (eNOS), thereby inhibiting the expression of PAI-1, and restoring telomerase activity. This suggests that the activity of retinal endothelial cells can be controlled by regulating the expression of SIRT1, so as to achieve the effect of treating diabetic retinopathy.
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- 2022
7. Effect of Neiyi Prescription of QIU on autophagy and angiogenic ability of endometriosis via the PPARγ/NF-κB signaling pathway
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Hua-Di Yang, Qun-Fei Zhu, Hui Li, Xue-Lu Jiang, Xu-Qun Xu, and Yong Guo
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Sirolimus ,Neovascularization, Pathologic ,Endometriosis ,NF-kappa B ,Obstetrics and Gynecology ,Chloroquine ,General Medicine ,Rats ,PPAR gamma ,Prescriptions ,Autophagy ,Animals ,Humans ,Female ,Drugs, Chinese Herbal ,Signal Transduction - Abstract
Neiyi Prescription of QIU (NYPQ) is a traditional Chinese medicine prescription for the treatment of endometriosis (EMS). Here, we aimed to examine the effects and mechanisms of NYPQ on angiogenic ability in EMS.EMS rats were established with estradiol valerate and autologous transplantation. EMS rats were intraperitoneally injected with chloroquine (CQ, 40 mg/kg), rapamycin (RAPA, 1 mg/kg), and monoclonal antibody VEGF (anti-VEGF, 3 mg/g/d) or administered 5, 10, 20 mg/g/d NYPQ decoction through oral gavage for 4 weeks, respectively. By the before and end of the treatment period, the volume of the endometriotic lesions was measured. The pathological morphology, angiogenesis, and the number of autophagosomes of the endometriotic lesion were observed by hematoxylin and eosin staining, immunohistochemistry, and transmission electron microscope, respectively. The cell viability, apoptosis, and angiogenesis of HUVECs were detected by MTT, flow cytometry, and lumen formation experiment, respectively. The expression levels of VEGF, autophagy-/apoptosis-/PPARγ/NF-κB- pathway-related proteins in endometrium tissues or HUVECs were detected by western blot assays.The autophagy agonist rapamycin reduced the lesion size, the microvessel density, and VEGF expression, and promoted the production of autophagosomes and the expression of autophagy-related proteins, while the autophagy inhibitor chloroquine had the opposite effects. In vivo, NYPQ could dose-dependently reduce lesion volume and microvessel density, ameliorate histopathological features and promote autophagosome production of ectopic endometrium. Moreover, serum-containing NYPQ could significantly inhibit the cell viability and tube formation of HUVECs and elevate HUVECs apoptosis. Besides, NYPQ significantly reduced VEGF and promoted autophagy-/apoptosis-related protein expressions. Also, NYPQ might promote autophagy and inhibit angiogenesis by activating the PPARγ/NF-κB pathway.Collectively, these findings indicate that NYPQ has therapeutic potential in experimentally induced peritoneal endometriosis, and its mechanism may be related to the activation of the PPARγ/NF-κB signaling pathway.
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- 2022
8. Insight into Crosstalk Between Mitophagy and Apoptosis/Necroptosis: Mechanisms and Clinical Applications in Ischemic Stroke
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Yan-di Yang, Zi-xin Li, Xi-min Hu, Hao Wan, Qi Zhang, Rui Xiao, and Kun Xiong
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Reperfusion Injury ,Necroptosis ,Mitophagy ,Genetics ,Humans ,Apoptosis ,cardiovascular diseases ,Biochemistry ,Ischemic Stroke - Abstract
Ischemic stroke is a serious cerebrovascular disease with high morbidity and mortality. As a result of ischemia-reperfusion, a cascade of pathophysiological responses is triggered by the imbalance in metabolic supply and demand, resulting in cell loss. These cellular injuries follow various molecular mechanisms solely or in combination with this disorder. Mitochondria play a driving role in the pathophysiological processes of ischemic stroke. Once ischemic stroke occurs, damaged cells would respond to such stress through mitophagy. Mitophagy is known as a conservatively selective autophagy, contributing to the removal of excessive protein aggregates and damaged intracellular components, as well as aging mitochondria. Moderate mitophagy may exert neuroprotection against stroke. Several pathways associated with the mitochondrial network collectively contribute to recovering the homeostasis of the neurovascular unit. However, excessive mitophagy would also promote ischemia-reperfusion injury. Therefore, mitophagy is a double-edged sword, which suggests that maximizing the benefits of mitophagy is one of the direction of future efforts. This review emphasized the role of mitophagy in ischemic stroke, and highlighted the crosstalk between mitophagy and apoptosis/necroptosis.
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- 2022
9. Cumulative effects of hypertriglyceridemia in HIV-infected patients switching from NNRTIs to PI-based antiretroviral therapy
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Yu, Zhang, Jiang, Xiao, Wen, Zhang, Ning, Han, Di, Yang, Wei, Liu, Hui, Zeng, Junyan, Han, and Hongxin, Zhao
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Hypertriglyceridemia ,Anti-HIV Agents ,virus diseases ,HIV Infections ,HIV Protease Inhibitors ,General Medicine ,Lipids ,Microbiology ,Infectious Diseases ,Anti-Retroviral Agents ,Antiretroviral Therapy, Highly Active ,Virology ,Humans ,Reverse Transcriptase Inhibitors ,lipids (amino acids, peptides, and proteins) ,Parasitology - Abstract
Introduction: The objective of this study was to investigate changes in serum lipids among HIV-infected patients switching from non-nucleoside-reverse transcriptase inhibitors (NNRTI) to protease inhibitor (PI)-based highly active antiretroviral therapy (HAART), and to determine if changes of lipid profiles impacted the monocyte subsets recovery. Methodology: Fifty-seven subjects who switched from NNRTIs to PI-based HAART (NNRTIs to PI group) and fifty-five subjects who initially started with PI-based HAART (initial PI group) were recruited. According to their baseline triglyceride (TG) levels, the NNRTIs to PI and initial PI groups were further divided into non-hypertriglyceridemia and hypertriglyceridemia subgroups, respectively. The effects of PI-based HAART on lipid profiles and monocyte subsets were analyzed. Results: At 48 weeks, the TG changes in the NNRTIs to PI group was higher than that of the initial PI group. The increases of serum TG levels in the initial PI non-hypertriglyceridemia group was greater than that of the NNRTIs to PI non-hypertriglyceridemia group. For the hypertriglyceridemia group at baseline, significant increment in TG levels were observed in the NNRTIs to PI hypertriglyceridemia group. The percentages of circulating CD14highCD16+ and CD14lowCD16+ subsets were elevated in the two groups. At 48 weeks, the proportion of CD14highCD16+ monocytes declined gradually, and the proportion of CD14lowCD16+ monocytes decreased independently of the TG level. Conclusions: For non-hypertriglyceridemia individuals at baseline, PI-based regimens increased the TG level in the initial PI group. For the NNRTIs to PI hypertriglyceridemia group, PI-based regimens reinforced HAART-related hypertriglyceridemia.
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- 2022
10. Cyclic tensile strain facilitates proliferation and migration of human aortic smooth muscle cells and reduces their apoptosis via miRNA-187-3p
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Di Yang, Guang-Yuan Wei, Min Li, Ming-Sheng Peng, Yuan Sun, Yan-Liang Zhang, Chuang Lu, Kai-Xiong Qing, and Hong-Bo Cai
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Myocytes, Smooth Muscle ,Bioengineering ,Apoptosis ,Applied Microbiology and Biotechnology ,biomechanics ,Cell Movement ,Tensile Strength ,Humans ,Protein Interaction Maps ,Aorta ,Cell Proliferation ,Gene Expression Profiling ,General Medicine ,bioinformatics ,Cardiovascular disorders ,human aortic smooth muscle cell ,MicroRNAs ,Gene Ontology ,Gene Expression Regulation ,miRNAs ,cyclic tensile strain ,Stress, Mechanical ,TP248.13-248.65 ,Biotechnology ,Research Article ,Research Paper - Abstract
The cardiovascular is a system that contains extremely complex mechanical factors, in which the circulatory flow of blood has rich mechanical laws. Many studies have revealed that mechanical factors play a very important role in the process of revascularization. Hence, it is essential to investigate the mechanical factors in the process of revascularization in depth. A cyclic tensile strain (CTS) was applied to human aortic smooth muscle cells (HASMCs) at a frequency of 1 Hz and amplitudes of 5%, 10% and 15%, respectively. SmallRNA-seq was used to identify differentially expressed miRNAs (DE-miRNAs) responding to CTS in HASMCs. Starbase database predicted the target genes of DE-miRNAs. Metascape was applied for GO and KEGG pathway enrichment analysis and protein–protein interaction network construction. The proliferation and migration of CTS-treated HASMCs were significantly enhanced, and apoptosis were significantly reduced compared to the control group. SmallRNA-seq results demonstrated that 55, 16 and 16 DE-miRNAs were present in 5%, 10% and 15% CTS-treated HASMCs, respectively. Compared to controls, with miR-26a-2-3p and miR-187-3p being the intersection of these DE-miRNAs. Starbase database identified 189 common target genes for miR-26a-2-3p and miR-187-3p. Common target genes are mainly enriched in the basolateral plasma membrane and endocytosis. Further, in vitro experiments exhibited that CTS upregulated miR-187-3p expression, and miR-187-3p enhanced the proliferation and migration of HASMCs and reduced their apoptosis. It is suggested that miR-187-3p may be an important target for CTS participate in the process of cardiovascular disease.
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- 2021
11. Long-term effects of immunosuppression treatment on IgA nephropathy: a systematic review and meta-analysis
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Na Chen, Yan-Di Yang, and Hao-Le Huang
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Immunosuppression Therapy ,Advanced and Specialized Nursing ,Oncology ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,Glomerulonephritis, IGA ,Immunosuppression ,medicine.disease ,Nephropathy ,Term (time) ,Anesthesiology and Pain Medicine ,Meta-analysis ,Internal medicine ,medicine ,Humans ,Drug Therapy, Combination ,business ,Immunosuppressive Agents - Abstract
Immunoglobulin A (IgA) nephropathy is an immune complex-mediated glomerulonephritis; however, the role of immunosuppression is still controversial, and there is a lack of studies on the long-term efficacy of immunosuppressive drugs in the treatment of the disease. We conducted a meta-analysis to examine the long-term effects of immunosuppressive drugs.To identify random control trial articles on immunosuppressive drugs in the treatment of IgA nephropathy with a follow-up time3 years, the following databases were searched: MEDLINE (1946 to August 2021), EMBASE (2000 to August 2021), PubMed (2000 to August 2021), and Cochrane library (2000 to August 2021). After screening, the Cochrane Handbook of Systematic Reviews of Interventions was used to examine the bias of the studies, Stata16.0 software was used for the analysis, and forest plots were used to present the results.A total of 744 patients from 7 studies were included in the study. The results of the meta-analysis showed that the long-term renal function integrity rate in the experimental group treated with immunosuppressive drugs was higher than that in the control group treated with placebos [risk ratio (RR) =1.10, 95% confidence interval (CI): 1.00, 1.22, Z=1.978, P=0.048], the efficacy of immunosuppressive drugs during the 3-6-year follow-up period (RR =1.07, 95% CI: 0.92, 1.23, Z=0.864, P=0.388) was similar to that of immunosuppressive drugs during the 8-10-year follow-up period (RR =1.14, 95% CI: 1.00, 1.30, Z=1.909, P=0.056), the efficacy of immunosuppressive drug therapy alone (RR =1.11, 95% CI: 1.00, 1.24, Z=1.914, P=0.056) was similar to that of immunosuppressive combination drug therapy (RR =1.07, 95% CI: 0.84, 1.35, Z=0.549, P=0.583), and the adverse reactions in the immunosuppressive drug group were higher than those in the placebo group (RR =1.59, 95% CI: 1.38, 1.85, Z=6.230, P=0.000).The use of immunosuppressive drugs can improve the long-term effects of IgA nephropathy treatment, but consideration should be given to the increase of adverse reactions during treatment.
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- 2021
12. Establishment of a bipedal rat model of lumbar facet joint osteoarthritis using intraarticular injection of urinary plasminogen activator
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Di, Yang, Wei, Hu, Hao, Li, Yin-Chu, Shao, Ji-Chun, Shan, Xu, Xiong, and Feng, Shuang
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Urokinase-Type Plasminogen Activator ,Zygapophyseal Joint ,Injections, Intra-Articular ,Rats ,Rats, Sprague-Dawley ,Disease Models, Animal ,Hyperalgesia ,Osteoarthritis ,Animals ,Eosine Yellowish-(YS) ,Humans ,Orthopedics and Sports Medicine ,Surgery ,Tolonium Chloride ,Hematoxylin - Abstract
Background Previous studies have demonstrated that by injecting uPA into the lumbar facet joints (LFJ) of normal rats, a rat LFJOA animal model can be successfully established. However, there is no evidence that intraarticular injection of uPA can induce or much serious osteoarthritis in bipedal rats, which biomechanics is much more similar to human than normal rats. To investigate whether intraarticular injection of urinary plasminogen activator (uPA) can induce LFJOA and low back pain symptoms in bipedal rats. Methods An experimental study on the construction of a modified animal model of lumbar facet joints osteoarthritis (LFJOA) which biomechanics is similar to human. Sprague–Dawley rats were treated with intraarticular injection of uPA in the L5–L6 facet joints (uPA group, n = 15) or saline (saline group, n = 15). The forelimbs of both two group rats were amputated. Mechanical and thermal hyperalgesia in the ipsilateral hind paws were evaluated using von Frey hairs and a thermoalgesia instrument, respectively. Toluidine blue staining, hematoxylin–eosin staining, and immunohistochemical examination of the LFJ was performed. Results The saline group rats have not demonstrated significant osteoarthritis in rats LFJ after surgery. The uPA group has not been induced significantly higher mechanical and thermal hyperalgesia in comparison with the saline group. But intraarticular injection of uPA in biped rats induced significantly stronger articular cartilage damage, synovitis, and proliferation of synovial cells in the LFJ. Inflammatory factors such as iNOS, IL-1β, and TNF-a were more significantly expressed in bipedal rat injected with uPA (p Conclusions Intraarticular injection of uPA can induce LFJOA in bipedal rats, while upright posture does not induce osteoarthritis in rats LFJ in the short term.
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- 2022
13. Performance of Xpert MTB/RIF for Diagnosis of Tuberculosis in HIV-Infected People in China: A Retrospective, Single-Center Study
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Guiju Gao, Chunyu Zhu, Yingchu Liu, Siyuan Yang, Jiang Xiao, Hongxin Zhao, Di Yang, Hongyuan Liang, Fang Wang, Liang Wu, Fujie Zhang, and Liang Ni
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Sputum ,Humans ,Tuberculosis ,HIV Infections ,General Medicine ,Mycobacterium tuberculosis ,Rifampin ,Sensitivity and Specificity ,Tuberculosis, Pulmonary ,Retrospective Studies - Abstract
BACKGROUND There are few studies of GeneXpert MTB/RIF (hereafter referred to as Xpert) detection technology in HIV-infected people in China. Therefore, this study aimed to evaluate the value of Xpert in HIV/TB co-infected patients and to provide reference and guidance for the diagnosis of TB in HIV-infected populations. MATERIAL AND METHODS This study reviewed medical records of human immunodeficiency virus (HIV) patients hospitalized at the Infection Center of Beijing Ditan Hospital affiliated to Capital Medical University from January 2018 to May 2020, and patients diagnosed with pulmonary and extrapulmonary tuberculosis were screened as study subjects. Sensitivity and specificity of Xpert were analyzed using ROC curves. RESULTS Of the 413 HIV patients, 177 patients met the entry criteria, of which the diagnosis was active pulmonary tuberculosis (PTB): 145 and extrapulmonary tuberculosis (EPTB): 32. The sensitivity of Xpert for PTB and EPTB was 82.0% and 100%, higher than that of acid-fast bacilli (AFB) (61.0% and 58.3%), and slightly lower than that of T-SPOT.TB (91.0% and 100%); the specificity was 83.7% and 93.5%, higher than that of AFB (72.6%, 87.1%) and T-SPOT.TB (16.6%, 21.2%). The sensitivity of Xpert was 100% in bronchoalveolar lavage fluid (BALF) and 80.0% in sputum; in patients with CD4⁺200 cells/mm³, the sensitivity of Xpert was 90.0% and specificity was 84.8%, higher than that of AFB (60.0%, 75.5%) and T-SPOT.TB (90.0%, 21.5%). CONCLUSIONS Xpert has a high accuracy in HIV/TB co-infected patients, and Xpert still shows a high sensitivity and specificity even in HIV patients with CD4⁺200 cells/mm³. Xpert is recommended for the diagnosis of tuberculosis in HIV-infected patients.
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- 2022
14. CSNK1D is associated with stemness and invasiveness in glioblastoma
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Yixiong Liu, Wei He, Yu Guo, Shuhan Qu, Fei Yao, Jin Liu, Jia Chai, Yanru Yang, Tianqi Xu, Ying Liu, Di Yang, Qingge Jia, and Mingyang Li
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Epithelial-Mesenchymal Transition ,Carcinogenesis ,Brain Neoplasms ,Cell Line, Tumor ,Neoplastic Stem Cells ,Humans ,Cell Biology ,Glioblastoma ,Prognosis ,Pathology and Forensic Medicine ,Cell Proliferation - Abstract
Glioblastoma (GBM) is the most common primary malignant brain tumor. It has a poor 5-year survival rate, a high recurrence rate, and few therapeutic options. Exploring the molecular processes underlying the formation and progression of GBM, as well as identifying novel therapeutic targets, is critical for improving GBM therapy and prognosis.We extracted primary GSCs (glioblastoma stem cells) from patient-derived samples. Different levels of CSNK1D were evaluated through immunohistochemistry, western blot and real-time PCR assays. A Transwell assay was used to detect invasive ability of cell lines. Tumorsphere formation assay was performed to detect cancer stemness properties. Orthotopic xenograft models were used to evaluate the effect of CSNK1D on GSC tumorigenesis.We found the expression levels of CSNK1D was elevated in GBM tissues compared with normal brain. CSNK1D expression had an increased tendency among WHO grades (G2-G4), and was higher in IDH wildtype group than in mutation group. The prognosis of the CSNK1D high expression group was significantly worse than that of the low expression group. Cox multivariate analysis showed that CSNK1D was also an independent prognostic factor in GBM patients. In primary GBM cells, we observed increased levels of CSNK1D in GSCs compared to non-stem tumor cells (NSTCs). In addition, the change of stemness markers expression and proliferation of GSCs were in coordinate with CSNK1D overexpression or knockdown. Furthermore, CSNK1D could affect the epithelial-mesenchymal transition (EMT) markers and MMPs expression in GSCs. Finally, disruption of CSNK1D expression impairs GSC survival and GBM tumor propagation in orthotopic xenograft models.Our results suggest that CSNK1D correlated with GBM prognosis and might influence the stemness and invasiveness of GSCs, which represented a potential therapeutic target in GBM patients.
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- 2022
15. Contrast-enhanced ultrasound imaging for intestinal lymphoma
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Jie Han, Meng-Jia Liu, Rui Zhang, Bo Wang, Ning-Yi Cui, Yantao Tian, Yong Wang, Di Yang, and Xuan-Tong Gong
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Pathology ,medicine.medical_specialty ,Lymphoma ,Contrast enhanced ultrasound ,Contrast Media ,Lesion ,Intestinal lymphoma ,B-mode ultrasound ,chemistry.chemical_compound ,Retrospective Study ,Lactate dehydrogenase ,Intestinal Neoplasms ,Humans ,Medicine ,Stage (cooking) ,Pathological ,Retrospective Studies ,Ultrasonography ,business.industry ,Ultrasound ,Gastroenterology ,Quantitative diagnosis ,Retrospective cohort study ,General Medicine ,chemistry ,Histopathological features ,Tumor necrosis factor alpha ,medicine.symptom ,business ,Contrast-enhanced ultrasound - Abstract
Background Intestinal lymphoma is a rare tumor. Contrast-enhanced ultrasound (CEUS) findings of intestinal lymphoma have not been reported previously, and the relationship between CEUS and clinicopathological features and prognostic factors is still unknown. Aim To describe the B-mode US and CEUS features of intestinal lymphoma and investigate the correlation of CEUS and histopathological features. Methods This was a single-center retrospective study. Eighteen patients with histologically confirmed intestinal lymphoma underwent B-mode US and CEUS examinations between October 2016 and November 2019. We summarized the features of B-mode US and CUES imaging of intestinal lymphoma and compared the frequency of tumor necrosis in intestinal lymphomas with reference to different pathological subtypes (aggressive or indolent) and clinical stage (early or advanced). The time-intensity curve parameters of CEUS were also compared between patients with normal and elevated serum lactate dehydrogenase. Results In B-mode imaging, four patterns were observed in intestinal lymphoma: Mass type (12/18, 66.7%), infiltration type (1/18, 5.6%), mesentery type (4/18, 22.2%) and mixed type (1/18, 5.6%). All cases were hypoechoic and no cystic areas were detected. On CEUS, most cases (17/18, 94.4%) showed arterial hyperechoic enhancement. All cases showed arterial enhancement followed by venous wash out. A relatively high rate of tumor necrosis (11/18, 61.1%) was observed in this study. Tumor necrosis on CEUS was more frequent in aggressive subtypes (10/13, 76.9%) than in indolent subtypes (1/5, 20.0%) (P = 0.047). There were no correlations between tumor necrosis and lesion size and Ann Arbor stage. There was no significant difference in time-intensity curve parameters between normal and elevated lactate dehydrogenase groups. Conclusion B-mode US and CEUS findings of intestinal lymphoma are characteristic. We observed a high rate of tumor necrosis, which appeared more frequently in aggressive pathological subtypes of intestinal lymphoma.
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- 2021
16. Immune infiltration-related N6-methyladenosine RNA methylation regulators influence the malignancy and prognosis of endometrial cancer
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Di Yang, Xiaoxin Ma, and Jian Ma
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Aging ,Adenosine ,DNA Copy Number Variations ,RNA methylation ,Biology ,Malignancy ,Ligands ,Methylation ,Disease-Free Survival ,Small Molecule Libraries ,chemistry.chemical_compound ,Lymphocytes, Tumor-Infiltrating ,Cell Line, Tumor ,YTHDC1 ,medicine ,Tumor Microenvironment ,Humans ,Gene Regulatory Networks ,Neoplasm Invasiveness ,Epigenetics ,RNA, Messenger ,Cell Proliferation ,Proportional Hazards Models ,Gene knockdown ,N6-methyladenosine ,immune infiltration ,Endometrial cancer ,RNA ,Cell Biology ,Middle Aged ,medicine.disease ,Prognosis ,Endometrial Neoplasms ,Neoplasm Proteins ,Gene Expression Regulation, Neoplastic ,Molecular Docking Simulation ,Real-time polymerase chain reaction ,chemistry ,endometrial cancer ,Mutation ,Cancer research ,Female ,ZC3H13 ,N6-Methyladenosine ,Research Paper - Abstract
N6-methyladenosine (m6A) RNA methylation is associated with malignant tumor progression and is modulated by various m6A RNA methylation regulator proteins. However, its role in endometrial cancer is unclear. In this work, we analyzed sequence, copy number variation, and clinical data obtained from the TCGA database. Expression was validated using real-time quantitative polymerase chain reaction and immunohistochemistry. Changes in m6A RNA methylation regulators were closely related to the clinicopathological stage and prognosis of endometrial cancer. In particular, ZC3H13, YTHDC1, and METTL14 were identified as potential markers for endometrial cancer diagnosis and prognosis. The TIMER algorithm indicated that immune cell infiltration correlated with changes in ZC3H13, YTHDC1, and METTL14 expression. Meanwhile, ZC3H13 or YTHDC1 knockdown promoted the proliferation and invasion of endometrial cancer cells. Through gene enrichment analysis, we constructed a regulatory network in order to explore the potential molecular mechanism involving ZC3H13, YTHDC1, and METTL14. Virtual screening predicted interactions of potential therapeutic compounds with METTL14 and YTHDC1. These findings advance the understanding of RNA epigenetic modifications in endometrial cancer while identifying m6A regulators associated with immune infiltration, prognosis, and potential treatment strategies.
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- 2021
17. Application of multi-label classification models for the diagnosis of diabetic complications
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Liang Zhou, Di Yang, Xuesong Bai, Xiaoyuan Zheng, Xinhua Ye, and Ying Wang
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China ,Computer science ,Computer applications to medicine. Medical informatics ,R858-859.7 ,030209 endocrinology & metabolism ,Health Informatics ,Multi-label classification ,030204 cardiovascular system & hematology ,Diabetic complication ,Diabetes Complications ,Correlation ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,Statistics ,Machine learning ,Diabetes Mellitus ,Electronic Health Records ,Humans ,Receiver operating characteristic ,Research ,Health Policy ,Pearson product-moment correlation coefficient ,Computer Science Applications ,Random forest ,ROC Curve ,Ranking ,symbols ,Classifier chains ,Delivery of Health Care ,Hamming code ,Key indicators - Abstract
Background Early diagnosis for the diabetes complications is clinically demanding with great significancy. Regarding the complexity of diabetes complications, we applied a multi-label classification (MLC) model to predict four diabetic complications simultaneously using data in the modern electronic health records (EHRs), and leveraged the correlations between the complications to further improve the prediction accuracy. Methods We obtained the demographic characteristics and laboratory data from the EHRs for patients admitted to Changzhou No. 2 People’s Hospital, the affiliated hospital of Nanjing Medical University in China from May 2013 to June 2020. The data included 93 biochemical indicators and 9,765 patients. We used the Pearson correlation coefficient (PCC) to analyze the correlations between different diabetic complications from a statistical perspective. We used an MLC model, based on the Random Forest (RF) technique, to leverage these correlations and predict four complications simultaneously. We explored four different MLC models; a Label Power Set (LP), Classifier Chains (CC), Ensemble Classifier Chains (ECC), and Calibrated Label Ranking (CLR). We used traditional Binary Relevance (BR) as a comparison. We used 11 different performance metrics and the area under the receiver operating characteristic curve (AUROC) to evaluate these models. We analyzed the weights of the learned model and illustrated (1) the top 10 key indicators of different complications and (2) the correlations between different diabetic complications. Results The MLC models including CC, ECC and CLR outperformed the traditional BR method in most performance metrics; the ECC models performed the best in Hamming loss (0.1760), Accuracy (0.7020), F1_Score (0.7855), Precision (0.8649), F1_micro (0.8078), F1_macro (0.7773), Recall_micro (0.8631), Recall_macro (0.8009), and AUROC (0.8231). The two diabetic complication correlation matrices drawn from the PCC analysis and the MLC models were consistent with each other and indicated that the complications correlated to different extents. The top 10 key indicators given by the model are valuable in medical application. Conclusions Our MLC model can effectively utilize the potential correlation between different diabetic complications to further improve the prediction accuracy. This model should be explored further in other complex diseases with multiple complications.
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- 2021
18. CCL2 regulation of MST1-mTOR-STAT1 signaling axis controls BCR signaling and B-cell differentiation
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Zhenzhen Li, Yukai Jing, Yingzi Zhu, Yu Hu, Jianlong Tang, Chaohong Liu, Qiuyue Chen, Di Yang, Quan Gong, Danqing Kang, Yanmei Huang, Ju Liu, Qianglin Chen, Xin Dai, Liru Qiu, Yan Chen, Na Li, Lu Yang, Heng Gu, Anwei Chen, Panpan Jiang, Li Luo, Heather Miller, Heng Mei, and Jiang Chang
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0301 basic medicine ,Chemokine ,Receptors, Antigen, B-Cell ,mTORC1 ,CCL2 ,Article ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Proto-Oncogene Proteins ,medicine ,Animals ,Humans ,Molecular Biology ,Chemokine CCL2 ,PI3K/AKT/mTOR pathway ,B cell ,Cell Proliferation ,biology ,Hepatocyte Growth Factor ,Chemistry ,Germinal center ,Cell Differentiation ,Cell Biology ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Proto-Oncogene Proteins c-bcr ,biology.protein ,Chemokines ,Signal transduction ,Signal Transduction - Abstract
Chemokines are important regulators of the immune system, inducing specific cellular responses by binding to receptors on immune cells. In SLE patients, decreased expression of CCL2 on mesenchymal stem cells (MSC) prevents inhibition of B-cell proliferation, causing the characteristic autoimmune phenotype. Nevertheless, the intrinsic role of CCL2 on B-cell autoimmunity is unknown. In this study using Ccl2 KO mice, we found that CCL2 deficiency enhanced BCR signaling by upregulating the phosphorylation of the MST1-mTORC1-STAT1 axis, which led to reduced marginal zone (MZ) B cells and increased germinal center (GC) B cells. The abnormal differentiation of MZ and GC B cells were rescued by in vivo inhibition of mTORC1. Additionally, the inhibition of MST1-mTORC1-STAT1 with specific inhibitors in vitro also rescued the BCR signaling upon antigenic stimulation. The deficiency of CCL2 also enhanced the early activation of B cells including B-cell spreading, clustering and signalosome recruitment by upregulating the DOCK8-WASP-actin axis. Our study has revealed the intrinsic role and underlying molecular mechanism of CCL2 in BCR signaling, B-cell differentiation, and humoral response.
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- 2021
19. Development of an Independent Prognostic Signature Based on Three Hypoxia-Related Genes for Breast Cancer
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Hui Wang, Yu Guo, Peipei Zhang, Zhijun Lin, Di Yang, Jiaohong Chen, Zhanzhan Li, Chi Zhang, Haoyu Yang, Binghui Yan, Zhimin Han, and Chuntao Tian
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Article Subject ,General Immunology and Microbiology ,Applied Mathematics ,Modeling and Simulation ,Gene Expression Profiling ,Humans ,Female ,Breast Neoplasms ,General Medicine ,Prognosis ,Hypoxia ,General Biochemistry, Genetics and Molecular Biology - Abstract
Background. Hypoxia was considered to be a prognostic indicator in a variety of solid tumors. This study aims at identifying the hypoxia-related genes (HRGs) in breast cancer (BC) and the feasibility of HRGs as a prognostic indicator. Methods. We downloaded the mRNA expression data of BC patients from TCGA and GEO databases. The LASSO Cox regression analysis was applied to screen the hub HRGs to establish a prognostic Risk Score. The independence of Risk Score was assessed by multivariate Cox regression analysis. And the immune checkpoint analysis was also performed. In addition, we also detected the expression level of hub HRGs in MCF-10A cells, MCF-7 cells, and SK-BR-3 cells by RT-qPCR. Results. Three HRGs were identified as hub genes with prognostic value in BC, including CA9, PGK1, and SDC1. The Risk Score constructed by these three genes could efficiently distinguish the prognosis of different BC patients and has been shown to be an independent prognostic indicator. In the high-risk group, patients had lower overall survival and poorer prognosis. In addition, the expression levels of five immune checkpoints (PD1, CTLA4, TIGIT, LAG3, and TIM3) in the high-risk group were significantly higher than those in the low-risk group. Moreover, the expression levels of PGK1 and SDC1 in BC cells were significantly increased. Conclusion. In this study, we established an efficiently model based on three optimal HRGs (CA9, PGK1, and SDC1) could clearly distinguish the prognosis of different BC patients.
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- 2022
20. Nomogram Model for Prediction of SARS-CoV-2 Breakthrough Infection in Fujian: A Case–Control Real-World Study
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Tianbin, Chen, Yongbin, Zeng, Di, Yang, Wenjing, Ye, Jiawei, Zhang, Caorui, Lin, Yihao, Huang, Yucheng, Ye, Jianwen, Li, Qishui, Ou, Jinming, Li, and Can, Liu
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Microbiology (medical) ,Nomograms ,Infectious Diseases ,SARS-CoV-2 ,Immunology ,COVID-19 ,Humans ,Microbiology ,Retrospective Studies - Abstract
SARS-CoV-2 breakthrough infections have been reported because of the reduced efficacy of vaccines against the emerging variants globally. However, an accurate model to predict SARS-CoV-2 breakthrough infection is still lacking. In this retrospective study, 6,189 vaccinated individuals, consisting of SARS-CoV-2 test-positive cases (n = 219) and test-negative controls (n = 5970) during the outbreak of the Delta variant in September 2021 in Xiamen and Putian cities, Fujian province of China, were included. The vaccinated individuals were randomly split into a training (70%) cohort and a validation (30%) cohort. In the training cohort, a visualized nomogram was built based on the stepwise multivariate logistic regression. The area under the curve (AUC) of the nomogram in the training and validation cohorts was 0.819 (95% CI, 0.780–0.858) and 0.838 (95% CI, 0.778–0.897). The calibration curves for the probability of SARS-CoV-2 breakthrough infection showed optimal agreement between prediction by nomogram and actual observation. Decision curves indicated that nomogram conferred high clinical net benefit. In conclusion, a nomogram model for predicting SARS-CoV-2 breakthrough infection based on the real-world setting was successfully constructed, which will be helpful in the management of SARS-CoV-2 breakthrough infection.
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- 2022
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21. A Reliable Estimate of Visceral Fat Area From Simple Anthropometric Measurements in Chinese Overweight and Obese Individuals
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Hanying, Liu, Di, Yang, Shaobo, Li, Yunfeng, Xiao, Yinfang, Tu, Danfeng, Peng, Yuqian, Bao, Junfeng, Han, and Haoyong, Yu
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Male ,China ,Child, Preschool ,Obesity, Abdominal ,Endocrinology, Diabetes and Metabolism ,Humans ,Infant ,Female ,Obesity ,Intra-Abdominal Fat ,Overweight - Abstract
ObjectiveVisceral obesity, reflected by the amount of visceral adipose tissue (VAT), is associated with multiple chronic diseases and metabolic disorders. The visceral fat area (VFA), measured by MRI, is the ‘gold standard’ for diagnosis of visceral obesity. In this study, a simple model to predict VFA was constructed to facilitate the identification and monitoring of patients who are at high risk of visceral obesity.MethodsThe 721 overweight and obese participants were divided into two groups according to sex, then randomly assigned to derivation and validation cohorts in a 1:2 ratio. Data from the derivation group were used to construct a multiple linear regression model; data from the validation group were used to verify the validity of the model.ResultsThe following prediction equations, applicable to both sexes, were developed based on age, waist circumference (WC) and neck circumference (NC) that exhibited strong correlations with the VFA: VFA=3.7×age+2.4×WC+5.5×NC-443.6 (R2 = 0.511, adjusted R2 = 0.481, for men) and VFA=2.8×age+1.7×WC+6.5×NC-367.3 (R2 = 0.442, adjusted R2 = 0.433, for women). The data demonstrated good fit for both sexes. A comparison of the predicted and actual VFA in the verification group confirmed the accuracy of the equations: for men, R2 = 0.489, adjusted R2 = 0.484 and intra-class correlation coefficient (ICC) = 0.653 (p < 0.001) and for women: R2 = 0.538, adjusted R2= 0.536 and ICC = 0.672 (p < 0.001). The actual and predicted VFAs also showed good agreement in a Bland-Altman plot, indicating the significant correlations of both equations with the actual VFA.ConclusionsBased on readily available anthropometric data, VFA prediction equations consisting of age, WC and NC were developed. The equations are robust, with good predictive power in both sexes; they provide ideal tools for the early detection of visceral obesity in Chinese overweight and obese individuals.
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- 2022
22. [Thermal Environment Evolution and Response Mechanism of Urban Sprawl Based on Multi-source Data]
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Jian-She, Liang, Yong-Ping, Bai, Xue-di, Yang, Zu-Qiao, Gao, Ling-Wei, Li, Chun-Yue, Zhang, and Qian, Wang
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Hot Temperature ,Temperature ,Humans ,Water ,Cities ,Environmental Monitoring - Abstract
Improving the urban thermal environment and improving the quality of human settlements are important prerequisites for creating ecologically livable cities. The current research on the relationship between urban expansion and the thermal environment is mostly based on remote sensing data, and the application of multi-source data is weak. Here, we selected the Xi'an metropolitan core area, measured the urban expansion and temporal and spatial evolution of the thermal environment based on Landsat remote sensing images in 2010 and 2020, and used multi-source data, such as interest points and the Baidu thermal index, to study the response mechanism of the urban thermal environment through geoscience statistical analysis methods. The results showed that:① the construction land in the study area had expanded by 200.84 km
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- 2022
23. Histone methyltransferase Smyd2 drives adipogenesis via regulating STAT3 phosphorylation
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Haibi Su, Chen Meng, Jie Xu, Zhenghua Su, Chenxi Xiao, and Di Yang
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STAT3 Transcription Factor ,Cancer Research ,Immunology ,Cell Biology ,Histone-Lysine N-Methyltransferase ,Epigenesis, Genetic ,Cellular and Molecular Neuroscience ,Mice ,3T3-L1 Cells ,Histone Methyltransferases ,Animals ,Humans ,Obesity ,Phosphorylation ,RNA, Small Interfering - Abstract
Adipogenesis is a complex cascade involved with the preadipocytes differentiation towards mature adipocytes, accelerating the onset of obesity. Histone methyltransferase SET and MYND domain-containing protein 2 (Smyd2), is involved in a variety of cellular biological functions but the epigenetic regulation of Smyd2 in adipogenesis and adipocyte differentiation remains unclear. Both Smyd2 siRNA and LLY-507, an inhibitor of Smyd2, were used to examine the effect of Smyd2 on adipogenesis and adipocyte differentiation in vitro. Smyd2 heterozygous knockout (Smyd2+/−) mice were also constructed to validate the relationship between Smyd2 and adipogenesis in vivo. We found that Smyd2 is abundant in white adipose tissue and closely correlated with adipocyte differentiation. Knockdown or inhibition of Smyd2 restrained adipocyte differentiation in vitro, which requires the phosphorylation of STAT3. In vivo functional validation, Smyd2+/− mice exert significant fat loss but not susceptible to HFD-induced obesity. Taken together, our findings revealed that Smyd2 is a novel regulator of adipocyte differentiation by regulating the phosphorylation of STAT3, which provides insights into the effects of epigenetic regulation in adipogenesis. Inhibition of Smyd2 might represent a viable strategy for anti-adipogenesis and maybe further alleviate obesity-related diseases in humans.
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- 2022
24. Bisphenol A analogues in associations with serum hormone levels among reproductive-aged Chinese men
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Jia-Yue Zeng, Pan-Pan Chen, Chong Liu, Yan-Ling Deng, Yu Miao, Min Zhang, Fei-Peng Cui, Ting-Ting Lu, Tian Shi, Ke-Di Yang, Chang-Jiang Liu, and Qiang Zeng
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Adult ,Male ,History ,China ,Polymers and Plastics ,Reproduction ,Endocrine Disruptors ,Industrial and Manufacturing Engineering ,Phenols ,Humans ,Testosterone ,Business and International Management ,Benzhydryl Compounds ,General Environmental Science - Abstract
Bisphenol A (BPA) as an endocrine disrupting chemical has been shown to alter reproductive endocrine function, but little is known on its analogues such as bisphenol F (BPF) and bisphenol S (BPS) with increasing usage and exposure.To explore the associations between exposures to BPA, BPF and BPS and serum reproductive hormones among reproductive-aged Chinese men.We measured BPA, BPF and BPS concentrations in repeated urine samples and multiple reproductive hormones in the serum samples collected from 462 men attending an infertility clinic in Wuhan, China. Linear regression models were applied to assess the associations between averaged urinary BPA, BPF and BPS levels and serum hormone concentrations, and restricted cubic spline (RCS) models were further utilized to explore potential non-linear associations. We also examined potential modifying effects by age and body mass index (BMI).There was little evidence of associations between BPA exposure and altered reproductive hormones. However, we found that elevated BPF and BPS exposures were in negative associations with estrogen (E2) levels and E2/T (total testosterone) ratio (all P for trends 0.05), and that elevated BPS exposure was negatively associated with SHBG levels (P for trend = 0.09). Based on the RCS models, these linear negative associations except that between BPS exposure and E2/T ratio were further confirmed. In stratified analyses, BPF and BPS exposures in relation to reduced E2 and E2/T ratio were more pronounced among men aged 30 years, whereas their associations with reduced SHBG levels were more pronounced among men aged ≤ 30. Also, BPS exposure in negative association with FSH only emerged among men with BMI ≥ 24 kg/mBPF and BPS exposures were negatively associated with male serum E2, E2/T ratio and SHBG levels, and these associations varied by age and BMI.
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- 2022
25. A map of the spatial distribution and tumour-associated macrophage states in glioblastoma and grade 4 IDH-mutant astrocytoma
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Wen Yin, Yi‐Fang Ping, Fei Li, Sheng‐Qing Lv, Xiao‐Ning Zhang, Xue‐Gang Li, Ying Guo, Qing Liu, Tian‐Ran Li, Liu‐Qing Yang, Kai‐Di Yang, Yu‐Qi Liu, Chun‐Hua Luo, Tao Luo, Wen‐Ying Wang, Min Mao, Min Luo, Zhi‐Cheng He, Mian‐Fu Cao, Cong Chen, Jing‐Ya Miao, Hui Zeng, Chao Wang, Lei Zhou, Ying Yang, Xi Yang, Qiang‐Hu Wang, Hua Feng, Yu Shi, and Xiu‐Wu Bian
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Brain Neoplasms ,Mutation ,Tumor-Associated Macrophages ,Humans ,Glioma ,Astrocytoma ,Glioblastoma ,Isocitrate Dehydrogenase ,Pathology and Forensic Medicine - Abstract
Tumour-associated macrophages (TAMs) abundantly infiltrate high-grade gliomas and orchestrate immune response, but their diversity in isocitrate dehydrogenase (IDH)-differential grade 4 gliomas remains largely unknown. This study aimed to dissect the transcriptional states, spatial distribution, and clinicopathological significance of distinct monocyte-derived TAM (Mo-TAM) and microglia-derived TAM (Mg-TAM) clusters across glioblastoma-IDH-wild type and astrocytoma-IDH-mutant-grade 4 (Astro-IDH-mut-G4). Single-cell RNA sequencing was performed on four cases of human glioblastoma and three cases of Astro-IDH-mut-G4. Cell clustering, single-cell regulatory network inference, and gene set enrichment analysis were performed to characterize the functional states of myeloid clusters. The spatial distribution of TAM subsets was determined in human glioma tissues using multiplex immunostaining. The prognostic value of different TAM-cluster specific gene sets was evaluated in the TCGA glioma cohort. Profiling and unbiased clustering of 24,227 myeloid cells from glioblastoma and Astro-IDH-mut-G4 identified nine myeloid cell clusters including monocytes, six Mo/Mg-TAM subsets, dendritic cells, and proliferative myeloid clusters. Different Mo/Mg-TAM clusters manifest functional and transcriptional diversity controlled by specific regulons. Multiplex immunostaining of subset-specific markers identified spatial enrichment of distinct TAM clusters at peri-vascular/necrotic areas in tumour parenchyma or at the tumour-brain interface. Glioblastoma harboured a substantially higher number of monocytes and Mo-TAM-inflammatory clusters, whereas Astro-IDH-mut-G4 had a higher proportion of TAM subsets mediating antigen presentation. Glioblastomas with a higher proportion of monocytes exhibited a mesenchymal signature, increased angiogenesis, and worse patient outcome. Our findings provide insight into myeloid cell diversity and its clinical relevance in IDH-differential grade 4 gliomas, and may serve as a resource for immunotherapy development. © 2022 The Pathological Society of Great Britain and Ireland.
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- 2022
26. Complete Endovascular Repair for Abdominal Aortic Aneurysm With Concomitant Aorto-Left Retroaortic Renal Vein Fistula
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Hong-Bo Cai, Yuan Sun, Ming-Sheng Peng, Min Li, Guang-Yuan Wei, Di Yang, and Kai-Xiong Qing
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Male ,Endovascular Procedures ,General Medicine ,Middle Aged ,Renal Veins ,Blood Vessel Prosthesis Implantation ,Treatment Outcome ,Arteriovenous Fistula ,cardiovascular system ,Humans ,Surgery ,Stents ,cardiovascular diseases ,Cardiology and Cardiovascular Medicine ,Aortic Aneurysm, Abdominal - Abstract
Background Abdominal aortic aneurysm (AAA) with concomitant aorto-retroarotic left renal vein fistula (ALRVF) is an extremely rare clinical condition. With the recent development of endovascular techniques, repair of such conditions with a complete minimal invasive approach is now possible. We reported here a case of endovascular repair of AAA with concomitant ALRVF. Case Presentation A 62-year-old gentleman presenting with AAA and concomitant ALRVF underwent complete endovascular repair, including an endovascular aortic aneurysm repair (EVAR) with bifurcated aortic graft as well as embolization of the aneurysm sac and deployment of a covered stent in the left retroarotic renal vein to achieve sealing of the arterial-venous fistula. The patient required no blood transfusion and no ICU stay. He has been followed up closely for 4 years and has been well clinically. Aneurysm sac size has remained stable. Conclusions Endovascular repair can be a safe and reliable surgical alternative to treat AAA with concomitant ALRVF. But long-term follow up and more clinical data are required to verify the durability of endovascular repair for such conditions.
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- 2022
27. Performance of human papillomavirus E6/E7 mRNA assay for primary cervical cancer screening and triage: Population-based screening in China
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Jing Zhang, Di Yang, Xiaoli Cui, Guangcong Liu, Zhumei Cui, Chunyan Wang, and Haozhe Piao
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Microbiology (medical) ,Adult ,China ,Immunology ,Papillomavirus Infections ,Uterine Cervical Neoplasms ,Alphapapillomavirus ,Middle Aged ,Microbiology ,Infectious Diseases ,Humans ,Female ,RNA, Messenger ,Triage ,Papillomaviridae ,Early Detection of Cancer ,Aged - Abstract
ObjectiveCervical cancer screening is very important in the prevention and treatment of cervical cancer. In China, the cervical screening strategy needs to be improved. To explore a suitable cervical screening strategy in China, we evaluated the performance of the human papillomavirus (HPV) E6/E7 mRNA (Aptima HPV (AHPV)) assay in primary screening and different triage strategies for women undergoing routine cervical screening.MethodsA total of 10,002 women aged 35 to 65 years of age were recruited in Liaoning Province and Qingdao City, China. Specimens were tested by liquid-based cytology (LBC) and the AHPV assay, and women who tested positive on any test were referred for colposcopy. Genotyping was performed on all high-risk HPV (HR-HPV)-positive samples. Test characteristics were calculated based on histological review.ResultsWe identified 109 women with high-grade squamous intraepithelial lesion or worse (HSIL+), including six with cervical cancer. The sensitivity of AHPV was clearly higher than that of LBC (92.7 [95% CI: 87.2, 97.2] vs. 67.9 [95% CI: 59.6, 76.1], p < 0.001). The specificity of AHPV was 93.0 (95% CI: 92.5, 93.5), which was lower than that of LBC (95.2 [95% CI: 94.8, 95.6], p < 0.001). There was no statistical difference between the positive predictive value of AHPV and LBC (13.5 [95% CI: 11.2, 16.2] vs. 14.3 [95% CI: 11.4, 17.6], p = 0.695). The difference of area under the curve (AUC) values between the AHPV test (0.928 [95% CI: 0.904, 0.953]) and LBC test (0.815 [95% CI: 0.771, 0.860]) in detecting HSIL+ was statistically significant (p < 0.001). Finally, among the three triage strategies, both the sensitivity (73.4 [95% CI: 65.1, 81.7]) and AUC (0.851 [95% CI: 0.809, 0.892]) of AHPV genotyping with reflex LBC triage were the greatest.ConclusionIn summary, the AHPV assay is both specific and sensitive for detecting HSIL+ and may be suitable for use in primary cervical cancer screening in China. AHPV genotyping with reflex LBC triage may be a feasible triage strategy.
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- 2022
28. Economic and social drivers of antibiotic dispensing practices among community pharmacies in Nepal
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Prajwol Nepal, Susan L. Davis, Kshitij Karki, Linda Kaljee, Di Yang, Deepak Bajracharya, Tyler Prentis, and Yubraj Acharya
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Adult ,Male ,medicine.medical_specialty ,medicine.drug_class ,030231 tropical medicine ,Antibiotics ,Inappropriate Prescribing ,Pharmacy ,Pharmacists ,Azithromycin ,03 medical and health sciences ,0302 clinical medicine ,Nepal ,Sore throat ,medicine ,Humans ,Revenue ,Medical prescription ,business.industry ,Public Health, Environmental and Occupational Health ,Drug Resistance, Microbial ,Middle Aged ,Anti-Bacterial Agents ,Infectious Diseases ,Socioeconomic Factors ,Work (electrical) ,Family medicine ,Female ,Parasitology ,Customer satisfaction ,Guideline Adherence ,medicine.symptom ,business ,medicine.drug - Abstract
Objective To assess economic and social drivers of dispensing antibiotics without prescription by community pharmacies in Nepal. Method A survey was conducted among 111 pharmacy owners and managers in five districts. Information on demographic and economic characteristics of the pharmacies (e.g. revenue and profits from antibiotics) and their inclination to sell antibiotics without a physician's prescription under various scenarios (e.g. diarrhoea in a child) was collected. Univariate analysis was conducted to assess the demographic and economic characteristics. Bivariate analysis was conducted to examine the relationship between dispensing antibiotics without prescription and economic and social factors. Results Azithromycin and amoxicillin were the most commonly dispensed antibiotics. The proportions of pharmacies reporting that they would 'most likely' or 'likely' dispense antibiotics without prescription to adult patients ranged from 36.9% (sore throat) to 67.6% (cough). The proportions for paediatric patients ranged from 62.2% (sore throat) to 80.2% (cough or diarrhoea). There was no consistent relationship between the likelihood of dispensing antibiotics and revenues, profits or the number of patients. Instead, dispensing behaviour was influenced by the pressure from the patient; the respondents were more likely to dispense antibiotics when the patient specifically asked for 'an antibiotic' rather than for 'a medicine', and 68.5% respondents ranked 'customer satisfaction' as the most important factor motivating their work. Conclusions In Nepal, inappropriate sale of antibiotics by community pharmacists is high, particularly for paediatric patients. Additional research is needed to establish key drivers of this behaviour and to help design effective approaches to reducing AMR.
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- 2021
29. Environmental enrichment implies GAT-1 as a potential therapeutic target for stroke recovery
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Hui Xiao, Chun-Xia Luo, Hai-Yin Wu, Yu-Hui Lin, Yanyu Sun, Meng-Cheng Yao, Huan-Yu Ni, Jian Dong, Yan Liu, Xiao-Lin Kou, Di Yang, Shi-Ying Cao, Feng Wu, Jun Li, Dong-Ya Zhu, Jin Wu, and Lei Chang
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Male ,GAT-1 ,GABA Plasma Membrane Transport Proteins ,functional recovery ,medicine.medical_treatment ,Medicine (miscellaneous) ,Optogenetics ,In Vitro Techniques ,Mice ,Neuroplasticity ,Medicine ,GABA transporter ,Tonic (music) ,Animals ,Humans ,Molecular Targeted Therapy ,Precision Medicine ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) ,Stroke ,gamma-Aminobutyric Acid ,Mice, Knockout ,Neurons ,Environmental enrichment ,Neuronal Plasticity ,biology ,business.industry ,Recovery of Function ,medicine.disease ,stroke ,Mice, Inbred C57BL ,Disease Models, Animal ,plasticity ,Corticospinal tract ,biology.protein ,environmental enrichment ,Female ,business ,Stroke recovery ,Neuroscience ,Signal Transduction ,Research Paper - Abstract
Rationale: Stroke is a leading cause of adult disability worldwide, but no drug provides functional recovery during the repair phase. Accumulating evidence demonstrates that environmental enrichment (EE) promotes stroke recovery by enhancing network excitability. However, the complexities of utilizing EE in a clinical setting limit its translation. Methods: We used multifaceted approaches combining electrophysiology, chemogenetics, optogenetics, and floxed mice in a mouse photothrombotic stroke model to reveal the key target of EE-mediated stroke recovery. Results: EE reduced tonic gamma-aminobutyric acid (GABA) inhibition and facilitated phasic GABA inhibition in the peri-infarct cortex, thereby promoting network excitability and stroke recovery. These beneficial effects depended on GAT-1, a GABA transporter regulating both tonic and phasic GABA signaling, as EE positively regulated GAT-1 expression, trafficking, and function. Furthermore, GAT-1 was necessary for EE-induced network plasticity, including structural neuroplasticity, input synaptic strengthening in the peri-infarct cortex, output synaptic strengthening in the corticospinal tract, and sprouting of uninjured corticospinal axons across the midline into the territory of denervated spinal cord, and functional recovery from stroke. Moreover, restoration of GAT-1 function in the peri-infarct cortex by its overexpression showed similar beneficial effects on stroke recovery as EE exposure. Conclusion: GAT-1 is a key molecular substrate of the effects of EE on network excitability and consequent stroke recovery and can serve as a novel therapeutic target for stroke treatment during the repair phase.
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- 2021
30. Cartilage endplate stem cells inhibit intervertebral disc degeneration by releasing exosomes to nucleus pulposus cells to activate Akt/autophagy
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Liwen Luo, Xiuying Jian, Changqing Li, Minghan Liu, Yue Zhou, Hui Sun, Ji Zhang, Yanqiu Wang, Di Yang, Ping Zhao, Zigang Shen, Jinghao Qin, and Zhiqiang Tian
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Male ,0301 basic medicine ,Cell ,Exosomes ,Phosphatidylinositol 3-Kinases ,0302 clinical medicine ,tert-Butylhydroperoxide ,Intervertebral Disc ,intervertebral disc degeneration ,Stem Cells ,apoptosis ,food and beverages ,Middle Aged ,Cell biology ,Tissue‐specific Stem Cells ,medicine.anatomical_structure ,Molecular Medicine ,cartilage endplate stem cells ,Female ,Erratum ,Signal transduction ,Stem cell ,Intervertebral Disc Displacement ,Signal Transduction ,Adult ,autophagy ,Nucleus Pulposus ,Morpholines ,macromolecular substances ,Biology ,Exosome ,03 medical and health sciences ,medicine ,Animals ,Humans ,exosome ,Protein kinase B ,PI3K/AKT/mTOR pathway ,Aged ,Inflammation ,Gene Expression Profiling ,Autophagy ,fungi ,Lumbosacral Region ,Cell Biology ,Rats ,carbohydrates (lipids) ,enzymes and coenzymes (carbohydrates) ,Cartilage ,030104 developmental biology ,Gene Expression Regulation ,Chromones ,Apoptosis ,Case-Control Studies ,Proto-Oncogene Proteins c-akt ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Degeneration of the cartilage endplate (CEP) induces intervertebral disc degeneration (IVDD). Nucleus pulposus cell (NPC) apoptosis is also an important exacerbating factor in IVDD, but the cascade mechanism in IVDD is not clear. We investigated the apoptosis of NPCs and IVDD when stimulated by normal cartilage endplate stem cell (CESC)‐derived exosomes (N‐Exos) and degenerated CESC‐derived exosomes (D‐Exos) in vitro and in vivo. Tert‐butyl hydroperoxide (TBHP) was used to induce inflammation of CESCs. The bioinformatics differences between N‐Exos and D‐Exos were analyzed using mass spectrometry, heat map, and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. NPC apoptosis was examined using TUNEL staining. The involvement of the AKT and autophagy signaling pathways was investigated using the signaling inhibitor LY294002. Magnetic resonance imaging, Western blotting, and immunofluorescence staining were used to evaluate the therapeutic effects of N‐Exos in rats with IVDD. TBHP effectively induced inflammation and the degeneration of CEP in rat. N‐Exos were more conducive to autophagy activation than D‐Exos. The apoptotic rate of NPCs decreased obviously after treatment with N‐Exos compared to D‐Exos. N‐Exos inhibited NPCs apoptosis and attenuated IVDD in rat via activation of the AKT and autophagy pathways. These results are the first findings to confirm that CEP delayed the progression of IVDD via exosomes. The therapeutic effects of N‐Exos on NPC apoptosis inhibition and the slowing of IVDD progression were more effective than D‐Exos due to activation of the PI3K/AKT/autophagy pathway, which explained the increase in the incidence of IVDD after inflammation of the CEP., Graphical abstract of the mechanism that cartilage endplate (CEP) inflammation accelerated the progression of intervertebral disc degeneration (IVDD). Normal cartilage endplate stem cell (CESC)‐derived exosomes (N‐Exos) can more effectively inhibit nucleus pulposus cell (NPC) apoptosis than degenerated CEPC‐derived exosomes (D‐Exos) due to the anti‐apoptotic protein carried by exosomes decreasing after the CEP degeneration. Furthermore, N‐Exos also activate the PI3K/AKT signaling pathway in NPC more conducively compared with D‐Exos, enhancing autophagy, alleviating NPC apoptosis in vitro and ameliorating IVDD in vivo
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- 2021
31. Tumor necrosis factor superfamily 14 is critical for the development of renal fibrosis
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Xu Cao, Gui-lian Xu, Feng Xu, Ming Tang, Ke-qin Zhang, Gui-qing Li, Jian Chen, Bo Han, Shu-Jing Li, Quan-you Zheng, Di Yang, You Li, Shun Wu, Qian-Hui He, and Kun Zhang
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Tumor Necrosis Factor Ligand Superfamily Member 14 ,Aging ,Pathology ,medicine.medical_specialty ,Kidney ,urologic and male genital diseases ,Nephropathy ,Proinflammatory cytokine ,Pathogenesis ,Mice ,Fibrosis ,medicine ,Renal fibrosis ,Animals ,Humans ,Inflammation ,Mice, Knockout ,TNFSF14 ,biology ,business.industry ,Cell Biology ,medicine.disease ,renal fibrosis ,Disease Models, Animal ,Phosphotransferases (Alcohol Group Acceptor) ,Sphingosine kinase 1 ,biology.protein ,Immunohistochemistry ,Kidney Diseases ,Tumor necrosis factor alpha ,Sphk1 ,business ,Research Paper - Abstract
Objective Tumor necrosis factor superfamily protein 14 (TNFSF14) was recently identified as a risk factor in some fibrosis diseases. However, the role of TNFSF14 in renal fibrosis pathogenesis remains unknown. Results It was found that TNFSF14 levels were significantly increased both in UUO-induced renal fibrotic mice and in patients with fibrotic nephropathy, compared with those in controls. Accordingly, Tnfsf14 deficiency led to a marked reduction in renal fibrosis lesions and inflammatory cytokines expression in the UUO mice. Furthermore, the levels of Sphk1, a critical molecule that causes fibrotic nephropathy, were remarkably reduced in Tnfsf14 KO mice with UUO surgery. In vitro recombinant TNFSF14 administration markedly up-regulated the expression of Sphk1 of primary mouse renal tubular epithelial cells (mTECs). Conclusion TNFSF14 is a novel pro-fibrotic factor of renal fibrosis, for which TNFSF14 up-regulates Sphk1 expression, which may be the underlying mechanism of TNFSF14-mediated renal fibrosis. Methods We investigated the effect of TNFSF14 on renal fibrosis and the relationship between TNFSF14 and pro-fibrotic factor sphingosine kinase 1 (Sphk1) by using the unilateral urethral obstruction (UUO)-induced mice renal fibrosis as a model and the specimen of patients with fibrosis nephropathy, by Masson trichrome staining, immunohistochemistry, qRT-PCR, and western blot analysis.
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- 2020
32. Identification of novel prognosis-related genes in the endometrial cancer immune microenvironment
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Di Yang, Xiaoxin Ma, Jian Ma, and Jing-Kai Zhang
- Subjects
Oncology ,Aging ,medicine.medical_treatment ,Databases, Genetic ,Tumor Microenvironment ,Gene Regulatory Networks ,Protein Interaction Maps ,HLA-DP beta-Chains ,biology ,Prognosis ,Real-time polymerase chain reaction ,CD52 Antigen ,endometrial cancer ,CD52 ,Immunohistochemistry ,Female ,Carcinoma, Endometrioid ,Algorithms ,Research Paper ,Signal Transduction ,medicine.medical_specialty ,Class I Phosphatidylinositol 3-Kinases ,immune microenvironment ,Immune system ,Predictive Value of Tests ,Internal medicine ,Biomarkers, Tumor ,medicine ,Humans ,PTEN ,business.industry ,Gene Expression Profiling ,Endometrial cancer ,Histocompatibility Antigens Class II ,PTEN Phosphohydrolase ,Reproducibility of Results ,Cell Biology ,Immunotherapy ,medicine.disease ,Endometrial Neoplasms ,Antigens, Differentiation, B-Lymphocyte ,HLA-DRB5 Chains ,Genetic marker ,CD74 ,Mutation ,biology.protein ,Transcriptome ,business ,HLA-DRB1 Chains - Abstract
The incidence of endometrial cancer is increasing each year, and treatment effects are poor for patients with advanced and specific subtypes. Exploring immune infiltration-related factors in endometrial cancer can aid in the prognosis of patients and provide new immunotherapy targets. We downloaded immune metagene and functional data of patients with different subtypes of endometrial cancer from The Cancer Genome Atlas database and selected the lymphocyte-specific kinase (LCK) metagene as a representative genetic marker of the immune microenvironment in endometrial cancer. The results showed that LCK metagene expression is related to the prognosis of patients with endometrioid endometrial adenocarcinoma subtypes and highly correlated with the PTEN and PIK3CA mutational status. A search for LCK-related modules returned seven independent genetic predictors of survival in patients with endometrial cancer. The TIMER algorithm showed that the expression of these seven genes was positively correlated with the infiltration levels of six types of immune cells. The diagnostic value of these markers was validated using real-time quantitative PCR and immunohistochemical methods. Our results identified CD74, HLA-DRB5, CD52, HLA-DPB1 and HLA-DRB1 as possible valuable genetic markers for the diagnosis and prognosis of endometrial cancer and provided a theoretical basis for immunotherapy targets for its clinical treatment.
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- 2020
33. [Transglutaminase 2 inhibits the proliferation of H1 subtype influenza virus in MDCK cells]
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Shouqing, Guo, Yuejiao, Liao, Zhenyu, Qiu, Geng, Liu, Jiamin, Wang, Di, Yang, Jiayou, Zhang, Zilin, Qiao, Zhongren, Ma, Zhuo, Li, and Zhenbin, Liu
- Subjects
Dogs ,Influenza A Virus, H1N1 Subtype ,Influenza, Human ,Animals ,Humans ,Protein Glutamine gamma Glutamyltransferase 2 ,Cell Proliferation ,Madin Darby Canine Kidney Cells - Abstract
Transglutaminase 2 (TGM2) is a ubiquitous multifunctional protein, which is related to the adhesion of different cells and tumor formation. Previous studies found that TGM2 is involved in the interaction between host cells and viruses, but the effect of TGM2 on the proliferation of influenza virus in cells has not been reported. To explore the effect of TGM2 during H1N1 subtype influenza virus infection, a stable MDCK cell line with TGM2 overexpression and a knockout cell line were constructed. The mRNA and protein expression levels of NP and NS1 as well as the virus titer were measured at 48 hours after pot-infection with H1N1 subtype influenza virus. The results showed that overexpression of TGM2 effectively inhibited the expression of
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- 2022
34. LncRNA CASC9 promotes cell proliferation and invasion in osteosarcoma through targeting miR-874-3p/SOX12 axis
- Author
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Haiyan Qiu, Di Yang, Xiaolin Li, and Fabo Feng
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Gene Expression Regulation, Neoplastic ,MicroRNAs ,Osteosarcoma ,Cell Movement ,Cell Line, Tumor ,Humans ,Orthopedics and Sports Medicine ,Surgery ,Bone Neoplasms ,RNA, Long Noncoding ,Cell Proliferation ,SOXC Transcription Factors - Abstract
Background Osteosarcoma (OS) is a common primary malignant bone tumor. This study aimed to explore the biological role of long on-coding RNA (lncRNA) CASC9 and its regulatory mechanism in OC. Methods The CASC9 expressions in OS cells and tissues were measured using qRT-PCR. The functional role of CASC9 in OC was studied using MTT assay, colony formation assay, transwell invasion assay, and xenograft tumor assay. In addition, the mechanism of CASC9 function was determined using luciferase reporter assay. Western blot was used to analyze protein expressions in our paper. Results LncRNA CASC9 was found to be up-regulated in OS. Knockdown of CASC9 inhibited the proliferation and invasion of OS cells. Besides, miR-874-3p was identified as the target of CASC9, and SOX12 acted as a potential target of miR-874-3p. The down-regulation of miR-874-3p recovered the reduction in cell invasion and proliferation in vitro which were induced by CASC9 knockdown and delayed the tumor progression in vivo. Conclusion LncRNA CASC9 promotes cell proliferation and invasion in OS via miR-874-3p/SOX12 axis. Our study might provide novel biomarkers and potential therapeutic targets for OS treatment.
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- 2022
35. Heat Shock-Binding Protein 21 Regulates the Innate Immune Response to Viral Infection
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Yan Xu, Qiong Yang, Binbin Xue, Xintao Wang, Renyun Tian, Rilin Deng, Shengwen Chen, Xiaohong Wang, Luoling Wang, Cong Wang, Jinwen Chen, Ruina You, Qian Liu, Huiyi Li, Jingjing Wang, Xinran Li, Shun Liu, Di Yang, Songqing Tang, and Haizhen Zhu
- Subjects
Virus Diseases ,Virology ,Insect Science ,Immunology ,Pathogenesis and Immunity ,Humans ,Interferon Regulatory Factor-3 ,Phosphorylation ,Microbiology ,Immunity, Innate ,Molecular Chaperones - Abstract
The induction of interferons (IFNs) plays an important role in the elimination of invading pathogens. Heat shock binding protein 21 (HBP21), first known as a molecular chaperone of HSP70, is involved in tumor development. Heat shock binding proteins have been shown to regulate diverse biological processes, such as cell cycle, kinetochore localization, transcription, and cilium formation. Their role in antimicrobial immunity remains unknown. Here, we found that HBP21 drives a positive feedback loop to promote IRF3-mediated IFN production triggered by viral infection. HBP21 deficiency significantly impaired the virus-induced production of IFN and resulted in greater susceptibility to viral infection both in vitro and in vivo. Mechanistically, HBP21 interacted with IRF3 and promoted the formation of a TBK1-IRF3 complex. Moreover, HBP21 abolished the interaction between PP2A and IRF3 to repress the dephosphorylation of IRF3. Analysis of HBP21 protein structure further confirmed that HBP21 promotes the activation of IRF3 by depressing the dephosphorylation of IRF3 by PP2A. Further study demonstrated that virus-induced phosphorylation of Ser85 and Ser153 of HBP21 itself is important for the phosphorylation and dimerization of IRF3. Our study identifies HBP21 as a new positive regulator of innate antiviral response, which adds novel insight into activation of IRF3 controlled by multiple networks that specify behavior of tumors and immunity. IMPORTANCE The innate immune system is the first-line host defense against microbial pathogen invasion. The physiological functions of molecular chaperones, involving cell differentiation, migration, proliferation and inflammation, have been intensively studied. HBP21 as a molecular chaperone is critical for tumor development. Tumor is related to immunity. Whether HBP21 regulates immunity remains unknown. Here, we found that HBP21 promotes innate immunity response by dual regulation of IRF3. HBP21 interacts with IRF3 and promotes the formation of a TBK1-IRF3 complex. Moreover, HBP21 disturbs the interaction between PP2A and IRF3 to depress the dephosphorylation of IRF3. Analysis of HBP21 protein structure confirms that HBP21 promotes the activation of IRF3 by blocking the dephosphorylation of IRF3 by PP2A. Interestingly, virus-induced Ser85 and Ser153 phosphorylation of HBP21 is important for IRF3 activation. Our findings add to the known novel immunological functions of molecular chaperones and provide new insights into the regulation of innate immunity.
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- 2022
36. Correlation between serum 25(OH)D and cognitive impairment in Parkinson's disease
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Han Wu, Hafiz Khuram Raza, Zhen Li, Zeheng Li, Jie Zu, Chuanying Xu, Di Yang, and Guiyun Cui
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Neurology ,Physiology (medical) ,Humans ,Surgery ,Cognitive Dysfunction ,Parkinson Disease ,Neurology (clinical) ,General Medicine ,Neuropsychological Tests ,Vitamin D - Abstract
This study aimed to investigate the relationship between serum 25(OH)D and cognitive impairment in patients with Parkinson's disease (PD), hoping to provide possible ideas for the diagnosis and prevention of PD with cognitive impairment. Vitamin D is a neurosteroid with neurotrophic and neuroprotective functions, playing an important role in PD and its progression. In the present study, serum 25(OH)D levels were significantly decreased in PD patients (45.86 ± 14.81 nmol/L)compared to healthy controls(56.54 ± 14.00 nmol/L) (P 0.001), and significant differences were also observed in PD patients with normal cognition (PD-NC), PD patients with mild cognitive impairment (PD-MCI)and PD patients with dementia (PDD)(P 0.05). Moreover, there was a positive correlation between serum 25(OH)D levels and Montreal cognitive assessment(MoCA) scores (r = 0.489,P 0.001).The increased serum 25(OH)D was an independent protective factor of cognitive impairment in PD (OR = 0. 949, P = 0.005), and the sensitivity, specificity, and AUC under the ROC curve area of serum 25(OH)D were 53.3%, 86.5%, and 0.713, respectively. These findings support the relationship between cognitive impairment and Vitamin D in PD patients. Serum 25(OH)D may be a useful biomarker for diagnosing cognitive impairment in patients with PD.
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- 2022
37. Exerkine fibronectin type-III domain-containing protein 5/irisin-enriched extracellular vesicles delay vascular ageing by increasing SIRT6 stability
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Chen Chi, Hui Fu, Yong-Hua Li, Guo-Yan Zhang, Fei-Yan Zeng, Qing-Xin Ji, Qi-Rui Shen, Xu-Jie Wang, Zi-Chen Li, Can-Can Zhou, Di-Yang Sun, Jiang-Tao Fu, Wen-Bin Wu, Ping-Ping Zhang, Jia-Bao Zhang, Jian Liu, Fu-Ming Shen, Dong-Jie Li, and Pei Wang
- Subjects
Mice, Knockout ,Inflammation ,Aging ,Angiotensin II ,HSP40 Heat-Shock Proteins ,Fibronectins ,Mice ,Extracellular Vesicles ,Child, Preschool ,Humans ,Animals ,Sirtuins ,Cardiology and Cardiovascular Medicine ,Muscle, Skeletal ,Aged ,Transcription Factors - Abstract
Aims Exercise confers protection against cardiovascular ageing, but the mechanisms remain largely unknown. This study sought to investigate the role of fibronectin type-III domain-containing protein 5 (FNDC5)/irisin, an exercise-associated hormone, in vascular ageing. Moreover, the existence of FNDC5/irisin in circulating extracellular vesicles (EVs) and their biological functions was explored. Methods and results FNDC5/irisin was reduced in natural ageing, senescence, and angiotensin II (Ang II)-treated conditions. The deletion of FNDC5 shortened lifespan in mice. Additionally, FNDC5 deficiency aggravated vascular stiffness, senescence, oxidative stress, inflammation, and endothelial dysfunction in 24-month-old naturally aged and Ang II-treated mice. Conversely, treatment of recombinant irisin alleviated Ang II-induced vascular stiffness and senescence in mice and vascular smooth muscle cells. FNDC5 was triggered by exercise, while FNDC5 knockout abrogated exercise-induced protection against Ang II-induced vascular stiffness and senescence. Intriguingly, FNDC5 was detected in human and mouse blood-derived EVs, and exercise-induced FNDC5/irisin-enriched EVs showed potent anti-stiffness and anti-senescence effects in vivo and in vitro. Adeno-associated virus-mediated rescue of FNDC5 specifically in muscle but not liver in FNDC5 knockout mice, promoted the release of FNDC5/irisin-enriched EVs into circulation in response to exercise, which ameliorated vascular stiffness, senescence, and inflammation. Mechanistically, irisin activated DnaJb3/Hsp40 chaperone system to stabilize SIRT6 protein in an Hsp70-dependent manner. Finally, plasma irisin concentrations were positively associated with exercise time but negatively associated with arterial stiffness in a proof-of-concept human study. Conclusion FNDC5/irisin-enriched EVs contribute to exercise-induced protection against vascular ageing. These findings indicate that the exerkine FNDC5/irisin may be a potential target for ageing-related vascular comorbidities.
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- 2022
38. RNA viromes from terrestrial sites across China expand environmental viral diversity
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Yan-Mei Chen, Sabrina Sadiq, Jun-Hua Tian, Xiao Chen, Xian-Dan Lin, Jin-Jin Shen, Hao Chen, Zong-Yu Hao, Michelle Wille, Zhuo-Cheng Zhou, Jun Wu, Feng Li, Hong-Wei Wang, Wei-Di Yang, Qi-Yi Xu, Wen Wang, Wen-Hua Gao, Edward C. Holmes, and Yong-Zhen Zhang
- Subjects
Microbiology (medical) ,China ,Virome ,Immunology ,Cell Biology ,Genome, Viral ,Plants ,Applied Microbiology and Biotechnology ,Microbiology ,Viruses ,Genetics ,Animals ,Humans ,RNA ,RNA Viruses ,Ecosystem ,Phylogeny - Abstract
Environmental RNA viruses are ubiquitous and diverse, and probably have important ecological and biogeochemical impacts. Understanding the global diversity of RNA viruses is limited by sampling biases, dependence on cell culture and PCR for virus discovery, and a focus on viruses pathogenic to humans or economically important animals and plants. To address this knowledge gap, we generated metatranscriptomic sequence data from 32 diverse environments in 16 provinces and regions of China. We identified 6,624 putatively novel virus operational taxonomic units from soil, sediment and faecal samples, greatly expanding known diversity of the RNA virosphere. These newly identified viruses included positive-sense, negative-sense and double-strand RNA viruses from at least 62 families. Sediments and animal faeces were rich sources of viruses. Virome compositions were affected by local environmental factors, including organic content and eukaryote species abundance. Notably, environmental factors had a greater impact on the abundance and diversity of plant, fungal and bacterial viruses than of animal viromes. Our data confirm that RNA viruses are an integral part of both terrestrial and aquatic ecosystems.
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- 2022
39. The m6A-induced lncRNA CASC8 promotes proliferation and chemoresistance via upregulation of hnRNPL in esophageal squamous cell carcinoma
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Qingnan Wu, Hongyue Zhang, Di Yang, Qingjie Min, Yan Wang, Weimin Zhang, and Qimin Zhan
- Subjects
Esophageal Neoplasms ,Cell Biology ,Applied Microbiology and Biotechnology ,Up-Regulation ,Gene Expression Regulation, Neoplastic ,Heterogeneous-Nuclear Ribonucleoprotein L ,Ribonucleoproteins ,Drug Resistance, Neoplasm ,Cell Line, Tumor ,Humans ,RNA, Long Noncoding ,Esophageal Squamous Cell Carcinoma ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Developmental Biology ,Cell Proliferation - Abstract
Long noncoding RNAs (lncRNAs) are dysregulated in many cancers. Here, we identified the molecular mechanisms of lncRNA Cancer Susceptibility Candidate 8 (CASC8) in promoting the malignancy of esophageal squamous cell carcinoma (ESCC). CASC8 was highly overexpressed in ESCC tissues and upregulation of CASC8 predicted poor prognosis in ESCC patients. Moreover, CASC8 decreased the cisplatin sensitivity of ESCC cells and promoted ESCC tumor growth
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- 2022
40. Longitudinal analysis of new-onset non-AIDS-defining diseases among people living with HIV: A real-world observational study
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Yujiao Duan, Hongxin Zhao, Weiming Tang, Meiling Chen, Xuan Liu, Di Yang, Guiju Gao, Jiang Xiao, Ning Han, Hongyuan Liang, Liang Wu, Liang Ni, Fang Wang, Yangzi Song, Xiaohui Xie, and Fujie Zhang
- Subjects
Hypertriglyceridemia ,Infectious Diseases ,Anti-HIV Agents ,Health Policy ,Hypercholesterolemia ,Humans ,RNA ,Reverse Transcriptase Inhibitors ,Pharmacology (medical) ,HIV Infections ,Viral Load ,CD4 Lymphocyte Count ,Dyslipidemias - Abstract
We aimed to analyze the incidence rates of new-onset diabetes, hypertriglyceridemia, hypercholesterolemia, liver injury, and renal injury during antiretroviral therapy (ART) among people living with HIV (PLWH) and determine the associated risk factors.This study included PLWH enrolled from Beijing Ditan Hospital from November 11, 2004, to December 29, 2018. The incidence rates of new-onset diabetes, hypertriglyceridemia, hypercholesterolemia, liver injury, and renal injury were calculated and stratified based on ART regimen, CD4 count, and HIV-RNA. Risk factors were determined using Cox regression analysis.Overall, 6747 participants were included. Moreover, 4.5%, 43.3%, 25.4%, 11.2%, and 6.2% of patients developed new-onset diabetes, hypertriglyceridemia, hypercholesterolemia, liver injury, and renal injury, respectively, with incidence rates of 1.7, 26.9, 10.2, 3.9, and 5.5 per 100 person-years, respectively. Longitudinally, the incidence rates and percentages of these outcomes were highest in the first year of ART. The percentage of dyslipidemia was significantly higher in protease inhibitor (PI)-based regimen than in non-nucleoside reverse transcriptase inhibitor (NNRTI)-based regimen. However, the percentage of liver injury was significantly higher in NNRTI-based regimen than in PI-based regimen. In multivariate Cox regression analysis, low CD4 count (200 cells/µL, adjusted hazard ratio [aHR] = 1.34, 95% confidence interval [CI] 1.15-1.57) and high HIV-RNA (10Clinical outcomes, including new-onset diabetes, dyslipidemia, and liver and renal injuries, are common in PLWH. Regular glucose, lipid, liver, and renal function monitoring is required during ART, especially in high-risk patients.
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- 2022
41. The metabolic genomic atlas reveals potential drivers and clinically relevant insights into the etiology of esophageal squamous cell carcinoma
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Xuesong Liu, Ruoxi Hong, Peina Du, Di Yang, Meibo He, Qingnan Wu, Lin Li, Yan Wang, Jie Chen, Qingjie Min, Jinting Li, Weimin Zhang, and Qimin Zhan
- Subjects
Esophageal Neoplasms ,Carcinoma, Squamous Cell ,Medicine (miscellaneous) ,Humans ,Ryanodine Receptor Calcium Release Channel ,Steroid 12-alpha-Hydroxylase ,Esophageal Squamous Cell Carcinoma ,Genomics ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) - Published
- 2022
42. Toxicity assessments and transcriptional effects of monofunctionalized Pt(II) complex under dark and light irradiation condition in Caenorhabditis elegans
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Hui Chong, Siyu Fang, Di Yang, Chuan Tan, Junjie Wei, Shu-Han Chang, Hongying Fan, Hang Yao, Aijian Qin, Hongxia Shao, Yuefei Zhang, Junling Leng, Dawei Su, Chengyin Wang, and Hualing Li
- Subjects
Inorganic Chemistry ,Cytoskeletal Proteins ,0302 Inorganic Chemistry, 0307 Theoretical and Computational Chemistry, 0399 Other Chemical Sciences ,Animals ,Humans ,Inorganic & Nuclear Chemistry ,Cisplatin ,Caenorhabditis elegans ,Caenorhabditis elegans Proteins ,Reactive Oxygen Species ,Biochemistry ,beta Catenin ,Platinum - Abstract
In vivo toxicity of aromatic ring (BODIPY, 1,3,5,7,8-pentamethyl dipyrrin borondifluoride) attached monofunctional Pt(II) complexes mCBP {[cis-Pt(NH3)2Cl] 8-(para-pyridine-methylene),1,3,5,7-tetramethyl dipyrrin borondifluoride}+ Nitrate- and dCBP {[cis-Pt(NH3)2Cl]28-(1,3-pyrimidine-5-methylene),1,3,5,7-tetramethyl dipyrrin borondifluoride}2+ diNitrate2- were tested in Caenorhabditis elegans (C. elegans). dCBP showed promising reactive oxygen ROS (reactive oxygen species) generating capability. This complex resulted reduction of lifespan, body length and egg laying rate under dark and light irradiation in both N2 (wild-type, cisplatin resistant) and ok938 (asna-1, cisplatin sensitive) C. elegans. Expressional change of several key cancer related pathway (JNK (c-Jun N-terminal kinase) and Wnt/β-catenin (Wingless/Integrated/β-catenin)) related genes (for instance, jnk-1, wrm-1 and gst-4) were confirmed by RNA sequencing experiments. These transcriptional alternations could explain physiological parameters change in nematode and partially revealed how both Pt(II) based complexes influence cancer related pathways. Furthermore, these associated genes exhibited the function of apoptosis, reduced chemoresistance of cancer cells and most of those expressional changes were linked to extended survival of cancer patients.
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- 2022
43. Stroke among highly active antiretroviral therapy-naive people living with the human immunodeficiency virus in China: a retrospective study of the characteristics, risk factors, and prognosis
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Ling, Zhang, Yu, Wang, Qiuhua, Xu, Wei, Zhang, Hongyuan, Liang, Liang, Wu, Liang, Ni, Guiju, Gao, Di, Yang, Hongxin, Zhao, and Jiang, Xiao
- Subjects
Adult ,China ,PLWH ,Research ,HIV ,HIV Infections ,Infectious and parasitic diseases ,RC109-216 ,Middle Aged ,Prognosis ,CD4 Lymphocyte Count ,Stroke ,Infectious Diseases ,Risk factors ,Antiretroviral Therapy, Highly Active ,Humans ,HAART-naive ,Aged ,Retrospective Studies - Abstract
Background We aimed to clarify the characteristics, risk factors, and prognosis of stroke among HAART-naive people living with HIV (PLWH) in China. Methods We selected HAART-naive PLWH admitted to Beijing Ditan Hospital, Capital Medical University, from 1 January 2009 to 31 December 2019. Demographic and clinical data were obtained by searching an anonymous electronic case system. Descriptive analysis and logistic regression and Cox proportional hazard models were used to determine the characteristics and predictors of stroke among all HAART-naive PLWH and evaluate the risk factors of mortality in HAART-naive PLWH with stroke. Results Stroke was diagnosed in 105 cases (3.7%) of 2867 HAART-naive PLWH. Multivariate logistic regression indicated that age of 30–55 years (OR 1.903, 95% CI 1.005–3.603, p = 0.048), age of ≥ 55 years (OR 4.104, 95% CI 1.928–8.737, p 65 years (AHR: 8.783, 95% CI 1.522–50.668, p = 0.015), complicated severe pneumonia (AHR: 3.940, 95% CI 1.106–14.029, p = 0.034), and AIDS-defining CNS diseases (AHR: 19.766, 95% CI 3.586–108.961, p = 0.001). Conclusions For HAART-naive people living with HIV (PLWH), stroke occurred in various age groups, and early screening for stroke, timely intervention for risk factors among patients in various age groups, and controlling the CD4 count are extremely important in reducing the burden of stroke.
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- 2022
44. Potential-Resolved Differential Electrochemiluminescence Immunosensor for Cardiac Troponin I Based on MOF-5-Wrapped CdS Quantum Dot Nanoluminophores
- Author
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Dexin Du, Di Yang, Jiangnan Shu, Zhiping Bian, Mohammad A. Haghighatbin, Mingquan Guo, and Hua Cui
- Subjects
Silver ,Potassium Compounds ,Metal Nanoparticles ,Biosensing Techniques ,Sulfides ,010402 general chemistry ,01 natural sciences ,Silver nanoparticle ,Analytical Chemistry ,Nanopores ,Limit of Detection ,Quantum Dots ,Cadmium Compounds ,Humans ,Electrochemiluminescence ,Metal-Organic Frameworks ,Fluorescent Dyes ,Immunoassay ,Detection limit ,Sulfates ,business.industry ,Chemistry ,Troponin I ,010401 analytical chemistry ,Electrochemical Techniques ,Tin oxide ,0104 chemical sciences ,Nanopore ,Quantum dot ,Luminescent Measurements ,Electrode ,Optoelectronics ,business ,Antibodies, Immobilized ,Biosensor - Abstract
Recently, nanoluminophores with the potential-resolved multicolor electrochemiluminescence (PRMCECL) property have emerged and shown promising applications in sensitive, selective, and accurate bioassays, bioimaging, and multicolor emitting devices. However, only limited PRMCECL nanoluminophores and their applications in ratiometric biosensors eliminating proportional errors have been reported. Herein, a novel PRMCECL nanoluminophore was synthesized by encapsulating CdS quantum dots (CdSQDs) into MOF-5 (CdSQDs@MOF-5). Using K2S2O8 as a coreactant, two electrochemiluminescence (ECL) peaks, ECL-1 centered at 685 nm and ECL-2 centered at 475 nm, were observed at -1.4 and -1.8 V, respectively. Related ECL mechanisms have been proposed. Based on the potential-resolved ECL signals, a label-free differential ECL immunosensor for the determination of cardiac troponin I (cTnI) was established by assembly of poly(diallyldimethylammonium chloride), CdSQDs@MOF-5, and cTnI antibody-functionalized silver nanoparticles on the surface of the fluorine-doped tin oxide electrode subsequently. In the presence of cTnI, cTnI was captured by the sensing interface, leading to an increase in ECL-1 and ECL-2 intensity. cTnI could be determined in the range of 0.01-1000 pg/mL with a detection limit of 5.01 fg/mL using the intensity difference between ECL-1 and ECL-2. This work provides a new family member of PRMCECL nanoluminophores. The proposed label-free differential ECL immunosensor provides a new strategy based on potential-resolved ECL signals, which could effectively eliminate the additive error and show better sensitivity, selectivity, and accuracy for the detection of cTnI than the single-signal strategy and ratiometric strategy.
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- 2020
45. Improving the early diagnosis of suspected patients with COVID-19: a retrospective study of 106 patients
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Xuesong Gao, Di Yang, Ping Gao, Te Xiao, Yijin Zhang, Zheng Yuan, Hongjie Li, Yanlin Guan, Wenshan Zhao, Xiaomin Liu, Xuefei Duan, and Guiju Gao
- Subjects
Adult ,Male ,medicine.medical_specialty ,Diagnostic methods ,Coronavirus disease 2019 (COVID-19) ,Pneumonia, Viral ,Microbiology ,030218 nuclear medicine & medical imaging ,Betacoronavirus ,03 medical and health sciences ,COVID-19 Testing ,0302 clinical medicine ,Virology ,Internal medicine ,Epidemiology ,medicine ,Humans ,Eosinopenia ,Pandemics ,Retrospective Studies ,Clinical Laboratory Techniques ,SARS-CoV-2 ,business.industry ,Significant difference ,COVID-19 ,Outbreak ,Retrospective cohort study ,General Medicine ,Middle Aged ,medicine.disease ,Early Diagnosis ,Infectious Diseases ,030220 oncology & carcinogenesis ,Female ,Parasitology ,Differential diagnosis ,Coronavirus Infections ,business - Abstract
Introduction: An outbreak of coronavirus disease 2019 (COVID-19) occurred in Wuhan, Hubei Province, China. This study aimed to analyze the clinical and epidemiologic characteristics of patients with COVID-19 to better differentiate the suspected patients in Beijing, China. Methodology: This was a retrospective, single-center study. Clinical and epidemiologic data were collected from suspected patients with COVID-19 admitted to Beijing Ditan Hospital from January 29 to February 21, 2020. Results: One hundred and six patients (60 males and 46 females, median age 36 years) were enrolled. Thirty-six patients were ultimately laboratory confirmed. Fifty-three were excluded from the diagnosis of COVID-19. The remaining 17 patients were highly suspected, although their nucleic acid tests were repeatedly negative. The confirmed patients and highly suspected patients had a significantly higher proportion of epidemiologic history than the excluded patients (P < 0.001). There was no significant difference in clinical symptoms or the underlying diseases among the three groups. The confirmed patients had a higher frequency of lymphopenia and eosinopenia than the highly suspected and excluded patients. Chest computed tomography scans showed bilateral lung involvement, and ground-glass opacity was more likely observed in the confirmed patients. Conclusion: The clinical features of the confirmed patients with COVID-19 were insufficient for early diagnosis of COVID-19. The epidemiologic history was of great significance in the early diagnosis of COVID-19. More sensitive diagnostic methods are needed to aid the differential diagnosis of suspected patients with COVID-19.
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- 2020
46. Multi-walled carbon nanotubes induce IL-1β secretion by activating hemichannels-mediated ATP release in THP-1 macrophages
- Author
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Jingpu Fan, Yiyong Chen, Xinbiao Guo, Jie Shen, and Di Yang
- Subjects
Inflammasomes ,THP-1 Cells ,Interleukin-1beta ,Biomedical Engineering ,Nerve Tissue Proteins ,02 engineering and technology ,Carbon nanotube ,010501 environmental sciences ,Toxicology ,01 natural sciences ,Connexins ,law.invention ,Adenosine Triphosphate ,law ,Macrophages, Alveolar ,NLR Family, Pyrin Domain-Containing 3 Protein ,Humans ,Macrophage ,Secretion ,THP1 cell line ,0105 earth and related environmental sciences ,Nanotubes, Carbon ,Chemistry ,021001 nanoscience & nanotechnology ,Cell biology ,Nanotoxicology ,Molecular mechanism ,Cytokine secretion ,NLRP3 inflammasome activation ,0210 nano-technology - Abstract
Multi-walled carbon nanotubes (MWCNTs) are known to induce pulmonary inflammatory effects through stimulating pro-inflammatory cytokine secretion from alveolar macrophages. Despite extensive studies on MWCNTs’ pro-inflammatory reactivity, the understanding of molecular mechanisms involved is still incomplete. In this study, we investigated hemichannel’s involvement in MWCNTs-induced macrophage IL-1β release. Our results showed that the unmodified and COOH MWCNTs could induce ATP release and ATP-P2X7R axis-dependent IL-1β secretion from THP-1 macrophages. By using various inhibitors, we confirmed that the MWCNTs-induced ATP release was primarily through hemichannels. EtBr dye uptake assay detected significant hemichannels opening in MWCNTs exposed THP-1 macrophages. Inhibition of hemichannels by CBX, 43Gap27, or 10Panx1 pretreatment results in decreased ATP and IL-1β release. The addition of ATP restored the reduced IL-1β secretion level from hemichannel inhibition. We also confirmed with five other types of MWCNTs that the induction of hemichannels by MWCNTs strongly correlates with their capacity to induce IL-1β secretion. Taken together, we conclude that hemichannels-mediated ATP release and subsequent NLRP3 inflammasome activation through P2X7R may be one mechanism by which MWCNTs induce macrophage IL-1β secretion. Our findings may provide a novel molecular mechanism for MWCNTs induced IL-1β secretion.
- Published
- 2020
47. The association between the microbes in the tracheobronchial aspirate fluid and bronchopulmonary dysplasia in preterm infants
- Author
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Guang-di Yang, Da-zhi Fan, Xiaoyan Gao, Yiheng Dai, Xiao-yun Xie, Ping-ming Gao, and Xin Xiao
- Subjects
Male ,Pediatrics ,medicine.medical_specialty ,Neonatal intensive care unit ,Birth weight ,Bronchi ,Sepsis ,03 medical and health sciences ,0302 clinical medicine ,Preterm ,Intensive Care Units, Neonatal ,030225 pediatrics ,medicine ,Humans ,Tracheobronchial aspirate fluid ,Retrospective Studies ,030219 obstetrics & reproductive medicine ,biology ,business.industry ,Incidence (epidemiology) ,Infant, Newborn ,lcsh:RJ1-570 ,Gestational age ,lcsh:Pediatrics ,medicine.disease ,biology.organism_classification ,Bronchopulmonary dysplasia ,Trachea ,Stenotrophomonas maltophilia ,medicine.anatomical_structure ,Gram-negative bacteria ,Pediatrics, Perinatology and Child Health ,Female ,business ,Infant, Premature ,Respiratory tract - Abstract
Objective The study aimed to evaluate the association between microbes in the lower respiratory tract (LRT) and the srisk for severe bronchopulmonary dysplasia (sBPD) in premature infants. Methods We conducted a retrospective, single-center study of preterm infants who were admitted to the neonatal intensive care unit (NICU) of Southern Medical University Affiliated Maternal & Child Health Hospital of Foshan, China, between January 2015 and December 2017. The microbes in the LRT were screened by using tracheobronchial aspirate fluid (TAF) culture. Results One hundred and fifty-five infants were included in the analysis. Among 155 infants, 41 were diagnosed with sBPD, and 114 were diagnosed without sBPD. There were significant differences between infants with and without sBPD in regard to birth weight (BW), gestational age (GA), the duration of endotracheal ventilation and supplemental oxygen. The incidence of retinopathy (ROP) and sepsis was higher in the sBPD infants than in the infants without sBPD. There was a difference in the detection rate of Gram-negative bacteria (GNB) between the two groups. Stenotrophomonas maltophilia and Klebsiella pneumoniae were mainly detected in TAF. Conclusions The LRT microbes were different between infants with and without sBPD, and GNB is more frequently detected in sBPD infants.
- Published
- 2020
48. A knowledge-driven feature learning and integration method for breast cancer diagnosis on multi-sequence MRI
- Author
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Hongwei Feng, Jun Feng, Hongyu Wang, Di Yang, Baoying Chen, Jiaqi Cao, and Yilin Xie
- Subjects
Computer science ,Feature vector ,Biomedical Engineering ,Biophysics ,Breast Neoplasms ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,Deep Learning ,0302 clinical medicine ,Breast cancer ,Image Interpretation, Computer-Assisted ,Image Processing, Computer-Assisted ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Diagnosis, Computer-Assisted ,Sensitivity (control systems) ,Models, Statistical ,medicine.diagnostic_test ,business.industry ,Deep learning ,Magnetic resonance imaging ,Pattern recognition ,Cognition ,medicine.disease ,Magnetic Resonance Imaging ,ROC Curve ,Domain knowledge ,Female ,Artificial intelligence ,business ,Feature learning ,Algorithms ,030217 neurology & neurosurgery - Abstract
Background The classification of benign versus malignant breast lesions on multi-sequence Magnetic Resonance Imaging (MRI) is a challenging task since breast lesions are heterogeneous and complex. Recently, deep learning methods have been used for breast lesion diagnosis with raw image input. However, without the guidance of domain knowledge, these data-driven methods cannot ensure that the features extracted from images are comprehensive for breast cancer diagnosis. Specifically, these features are difficult to relate to clinically relevant phenomena. Purpose Inspired by the cognition process of radiologists, we propose a Knowledge-driven Feature Learning and Integration (KFLI) framework, to discriminate between benign and malignant breast lesions using Multi-sequences MRI. Methods Starting from sequence division based on characteristics, we use domain knowledge to guide the feature learning process so that the feature vectors of sub-sequence are constrained to lie in characteristic-related semantic space. Then, different deep networks are designed to extract various sub-sequence features. Furthermore, a weighting module is employed for the integration of the features extracted from different sub-sequence images adaptively. Results The KFLI is a domain knowledge and deep network ensemble, which can extract sufficient and effective features from each sub-sequence for a comprehensive diagnosis of breast cancer. Experiments on 100 MRI studies have demonstrated that the KFLI achieves sensitivity, specificity, and accuracy of 84.6%, 85.7% and 85.0%, respectively, which outperforms other state-of-the-art algorithms.
- Published
- 2020
49. Identification of Ala2Thr mutation in insulin gene from a Chinese MODY10 family
- Author
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Meisheng Jiang, Di Yang, Yating Chen, Yanjun Liu, Xiaoxu Ge, Limei Liu, Yanzhong Wang, Mingqiang Song, Xin Huang, Ming Lu, Yongfeng Wang, Rong Zhang, Jun Yin, Ying Wang, Feng Wang, Juan Zhang, and Ming Li
- Subjects
Adult ,Male ,Threonine ,0301 basic medicine ,Proband ,China ,Preproinsulin ,medicine.medical_specialty ,Clinical Biochemistry ,Mutant ,Mutation, Missense ,Biology ,Protein Structure, Secondary ,Cell Line ,Structure-Activity Relationship ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Insulin ,Genetic Predisposition to Disease ,Molecular Biology ,Proinsulin ,Family Health ,Alanine ,Endoplasmic reticulum ,Wild type ,Cell Biology ,General Medicine ,Transfection ,Middle Aged ,Endoplasmic Reticulum Stress ,Pedigree ,Glucose ,030104 developmental biology ,Endocrinology ,Diabetes Mellitus, Type 2 ,Hyperglycemia ,030220 oncology & carcinogenesis ,Mutation ,Unfolded protein response ,Female - Abstract
More than 80% of maturity-onset diabetes of the young (MODY) in Chinese is genetically unexplained. To investigate whether the insulin gene (INS) mutation is responsible for some Chinese MODY, we screened INS mutations causing MODY10 in MODY pedigrees and explored the potential pathogenic mechanisms. INS mutations were screened in 56 MODY familial probands. Structure-function characterization and clinical profiling of identified INS mutations were conducted. An INS mutation, at the position 2 alanine-to-threonine substitution (A2T), was identified and co-segregated with hyperglycemia in a MODY pedigree. The A2T mutation converted an α-helix into a β-sheet at the N-terminal of the signal peptide (SP) of preproinsulin. The A2T mutation did not affect preproinsulin translocation across endoplasmic reticulum (ER) membrane, but impaired its SP cleavage within the ER. In INS-1 cells transfected with an A2T mutant, glucose-stimulated insulin secretion (GSIS) was significantly decreased, while BiP luciferase activities were significantly increased compared to that of wild type (WT). We identified an INS-A2T mutation cosegregating with diabetes in a Chinese MODY pedigree. This mutation severely impaired SP cleavage and thus blocked the formation of proinsulin, resulting in enhanced ER stress, which may be responsible for decreased insulin secretion and subsequently, the onset of MODY10.
- Published
- 2020
50. WASP and Mst1 coregulate B-cell development and B-cell receptor signaling
- Author
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Xiaodong Zhao, Xiaoming Bai, Heather Miller, Panpan Jiang, Bebhinn Treanor, Yongjie Zhang, Chaohong Liu, Xiaoyu Sun, Jinzhi Wang, Wenyan Li, Lu Huang, Wenxia Song, Di Yang, and Xin Dai
- Subjects
MST1 ,Receptors, Antigen, B-Cell ,macromolecular substances ,Biology ,Lymphocyte Activation ,medicine.disease_cause ,Mice ,Proto-Oncogene Proteins ,medicine ,Animals ,Humans ,Receptor ,B cell ,Mice, Knockout ,B-Lymphocytes ,Hepatocyte Growth Factor ,Kinase ,breakpoint cluster region ,Hematology ,Cell biology ,medicine.anatomical_structure ,Phosphorylation ,Erratum ,Signal transduction ,Carcinogenesis ,Wiskott-Aldrich Syndrome Protein ,Signal Transduction - Abstract
Mst1 is a serine/threonine kinase involved in cell survival, proliferation, apoptosis, and tumorigenesis. In mice, Mst1 regulates actin dynamics required for T-cell adhesion and migration, which correlate with thymic egress and entry into lymphatic tissue. The role of Mst1 in B cells and how it may control actin-dependent processes has not been well characterized. Wiskott-Aldrich syndrome protein (WASP) deficiency only moderately affects development and B-cell receptor (BCR) signaling, suggesting WASP likely associates with other molecules. We investigated whether Mst1 associates with WASP to regulate B-cell development and activation. Experimenting on Mst1/WASP double knockout (DKO) mice, we found a severe defect in the bone marrow B-cell development, and BCR signaling in the DKO mice was severely reduced. Even though WASP or Mst1 could influence the early B-cell activation, we found that the early activation events such as B-cell spreading, BCR clustering, and BCR signaling were much more impaired in the B cells from DKO mice. Furthermore, reciprocal regulation between Mst1 and WASP was observed in WASP and Mst1 KO mice, whereby the localization and function of phosphorylated WASP were affected in Mst1 KO mice. Most importantly, Mst1 inhibits the expression of WASP by decreasing the expression of WASP-interacting protein. Interestingly, we also found that WASP deficiency in patients and mice interferes with phosphorylated Mst1 localization and therefore function in B cells. Overall, our study provides a partner for WASP to regulate B-cell development and BCR signaling, as well as the reciprocal regulating molecular mechanism of one another.
- Published
- 2020
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