5 results on '"Amy Qi"'
Search Results
2. A systematic review of the diagnostic accuracy of artificial intelligence-based computer programs to analyze chest x-rays for pulmonary tuberculosis
- Author
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Nazi Torabi, Faiz Ahmad Khan, Ruvandhi R. Nathavitharana, Alexei Korobitsyn, Luke Jeagal, Madhukar Pai, Dick Menzies, Miriam Harris, and Amy Qi
- Subjects
Bacterial Diseases ,Critical Care and Emergency Medicine ,Quality Assurance, Health Care ,Design elements and principles ,Diagnostic accuracy ,CAD ,030218 nuclear medicine & medical imaging ,Geographical Locations ,0302 clinical medicine ,Mathematical and Statistical Techniques ,Medicine and Health Sciences ,Medicine ,030212 general & internal medicine ,Diagnosis, Computer-Assisted ,Multidisciplinary ,Radiology and Imaging ,Statistics ,Research Assessment ,Metaanalysis ,Systematic review ,Infectious Diseases ,Area Under Curve ,Physical Sciences ,Tuberculosis Diagnosis and Management ,Clinical evaluation ,Research Article ,China ,Computer and Information Sciences ,Asia ,Systematic Reviews ,Science ,Research and Analysis Methods ,Sensitivity and Specificity ,Computer Software ,03 medical and health sciences ,Pulmonary tuberculosis ,Artificial Intelligence ,Predictive Value of Tests ,Diagnostic Medicine ,Humans ,Tuberculosis ,Statistical Methods ,Tuberculosis, Pulmonary ,Receiver operating characteristic ,business.industry ,Tropical Diseases ,Triage ,Radiography ,People and Places ,Artificial intelligence ,business ,Software ,Mathematics - Abstract
We undertook a systematic review of the diagnostic accuracy of artificial intelligence-based software for identification of radiologic abnormalities (computer-aided detection, or CAD) compatible with pulmonary tuberculosis on chest x-rays (CXRs). We searched four databases for articles published between January 2005-February 2019. We summarized data on CAD type, study design, and diagnostic accuracy. We assessed risk of bias with QUADAS-2. We included 53 of the 4712 articles reviewed: 40 focused on CAD design methods (“Development” studies) and 13 focused on evaluation of CAD (“Clinical” studies). Meta-analyses were not performed due to methodological differences. Development studies were more likely to use CXR databases with greater potential for bias as compared to Clinical studies. Areas under the receiver operating characteristic curve (median AUC [IQR]) were significantly higher: in Development studies AUC: 0.88 [0.82–0.90]) versus Clinical studies (0.75 [0.66–0.87]; p-value 0.004); and with deep-learning (0.91 [0.88–0.99]) versus machine-learning (0.82 [0.75–0.89]; p = 0.001). We conclude that CAD programs are promising, but the majority of work thus far has been on development rather than clinical evaluation. We provide concrete suggestions on what study design elements should be improved.
- Published
- 2019
3. Rapid Screening of Fluoroquinolone Resistance Determinants in Streptococcus pneumoniae by PCR-Restriction Fragment Length Polymorphism and Single-Strand Conformational Polymorphism
- Author
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Fang Chi, Raymond Lai, Amy Qi, Margaret Ip, and Shirley S.L. Chau
- Subjects
DNA Topoisomerase IV ,DNA, Bacterial ,Microbiology (medical) ,In Vitro Techniques ,Biology ,medicine.disease_cause ,Polymerase Chain Reaction ,DNA gyrase ,law.invention ,law ,Drug Resistance, Bacterial ,Genotype ,Streptococcus pneumoniae ,medicine ,Humans ,Gene ,Polymorphism, Single-Stranded Conformational ,Polymerase chain reaction ,Genetics ,Base Sequence ,Bacteriology ,Single-strand conformation polymorphism ,biochemical phenomena, metabolism, and nutrition ,Amplicon ,Molecular biology ,Amino Acid Substitution ,DNA Gyrase ,Genes, Bacterial ,Restriction fragment length polymorphism ,Polymorphism, Restriction Fragment Length ,Fluoroquinolones - Abstract
A rapid method, using PCR-restriction fragment length and single-strand conformation polymorphism (SSCP), was applied to screen for mutations of the fluoroquinolone resistance determinants in Streptococcus pneumoniae . One hundred nonduplicate Streptococcus pneumoniae isolates with ciprofloxacin MICs of ≥4.0 μg/ml from the Prince of Wales Hospital, Hong Kong, years 2000 to 2003, were examined. For each isolate, PCR amplicons of quinolone resistance-determining regions (QRDRs) of gyrA , gyrB , parC , and parE genes were digested with AluI, HinfI, Sau3AI, and MspI, respectively, and analyzed by SSCP. Each SSCP pattern was given a number, and each isolate obtained a four-digit code, e.g., 1111, that represented the SSCP profile. The SSCP patterns were correlated to mutations characterized from sequence analyses of PCR amplicons. The most common SSCP profile obtained was no. 5232 (40%), which included strains with two amino acid substitutions in the ParC (Lys-137-Asn) and ParE (Ile-460-Val) genes, followed by the SSCP profile 5223 (17%), which included strains with amino acid substitutions in the ParE (Ile-460-Val) gene only. Ten isolates (10%) with amino acid substitutions at GyrA and ParE (±ParC) genes were resistant to levofloxacin with a MIC of ≥16 μg/ml. Other SSCP profiles were unique in distinguishing the common amino acid substitutions in GyrA (Ser-81-Phe) and ParC (Lys-137-Asn, Ser-79-Phe plus Lys-137-Asn, Asp-83-Asn plus Lys-137-Asn, Ser-79-Phe, and Glu-96-Asp). SSCP analysis of restricted fragments generated patterns that were highly discriminative for mutations present in the QRDRs of gyrA , gyrB , parC , and parE . This method provides a database of high resolution profiles on these mutations and allows rapid screening for new mutations of the fluoroquinolone resistance genes.
- Published
- 2006
4. Race, Urban Community Stressors, and Behavioral and Emotional Problems of Children With Special Health Care Needs
- Author
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Nancy L. Swigonski, Joan K. Austin, Rong Amy Qi, Kim D. Jaffee, Janie Canty-Mitchell, and Gilbert C. Liu
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Male ,Child Health Services ,MEDLINE ,Black People ,Behavioral Symptoms ,Social Environment ,Health Services Accessibility ,White People ,Community health center ,Health care ,Urban Health Services ,Humans ,Medicine ,Child ,Poverty ,Analysis of Variance ,business.industry ,Stressor ,Social environment ,United States ,Psychiatry and Mental health ,Health psychology ,Female ,Health education ,business ,Stress, Psychological ,Clinical psychology - Abstract
This study examined the relationship of community-level stressors to behavioral and emotional problems among African-American and white children with special health care needs.The authors interviewed 257 low-income caregivers of children with special health care needs in an urban Midwestern city who brought their child for a primary health care visit to a community health center between September 2001 and May 2002. Sociodemographic characteristics as well as information about the children's behavioral and emotional problems, the health status of the children, perceptions of urban community stress, access to health care, and satisfaction with health care were collected to determine racial differences in the impact of urban stress on behavioral and emotional problems.Urban community stressors, race, and child's health status were significantly associated with behavioral and emotional problems among children with special health care needs. The association between urban stress and total behavioral problems did not differ by race.When caring for children with special health care needs, especially those with emotional or behavioral problems, primary care providers may be better able to identify important aggravating factors if they also assess urban stress. Systems of care are needed that can assist in addressing urban community-level stressors.
- Published
- 2005
5. Behavioral and mental health problems in low-income children with special health care needs
- Author
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Kim D. Jaffee, Janie Canty-Mitchell, Rong Amy Qi, Joan K. Austin, and Nancy L. Swigonski
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Adult ,Counseling ,Male ,Parents ,Low income ,medicine.medical_specialty ,Adolescent ,Health Status ,Children with special health care needs ,MEDLINE ,CBCL ,Child Behavior Disorders ,Midwestern United States ,Surveys and Questionnaires ,Health care ,Prevalence ,Humans ,Medicine ,Child ,Child Behavior Checklist ,Psychiatry ,Poverty ,Aged ,business.industry ,Mental Disorders ,Middle Aged ,Mental health ,Disabled Children ,Logistic Models ,Mental Health ,Caregivers ,Child, Preschool ,Needs assessment ,Female ,Pshychiatric Mental Health ,business ,Attitude to Health ,Needs Assessment - Abstract
This study examined caregiver perceptions of mental health problems and counseling needs in low-income children with special health care needs (CSHCN). Interviewers collected data from 257 caregivers of CSHCN (61% males; 60% African American; Mean age = 8.4 years) attending six Midwestern inner-city health clinics. Measures included the Child Behavior Checklist (CBCL) and an investigator-designed questionnaire. CBCL T-scores indicated that 38% of CSHCN had a behavioral or mental health problem, but only 26% of caregivers perceived the need for treatment or counseling. CSHCN should be assessed and referred appropriately for behavioral and mental health problems during routine health care visits.
- Published
- 2004
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