1. Effects of N-Terminal Residues on the Assembly of Constrained β-Hairpin Peptides Derived from Aβ
- Author
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Tuan D. Samdin, Victoria Sahrai, Matthew Klun, Nicholas L. Truex, Alberto Smith, Adam G. Kreutzer, Michał Wierzbicki, James S. Nowick, Mike Valenzuela, and William J. Howitz
- Subjects
Models, Molecular ,chemistry.chemical_classification ,Amyloid beta-Peptides ,Protein Conformation ,Stereochemistry ,Hydrogen bond ,Chemistry ,Aβ oligomers ,Neurodegeneration ,Peptide ,General Chemistry ,Random hexamer ,Crystallography, X-Ray ,medicine.disease ,Biochemistry ,Article ,Catalysis ,Colloid and Surface Chemistry ,medicine ,Humans ,β amyloid peptide ,Protecting group ,Polyacrylamide gel electrophoresis - Abstract
This paper describes the synthesis, solution-phase biophysical studies, and X-ray crystallographic structures of hexamers formed by macrocyclic β-hairpin peptides derived from the central and C-terminal regions of Aβ, which bear “tails” derived from the N-terminus of Aβ. Soluble oligomers of the β-amyloid peptide, Aβ, are thought to be the synaptotoxic species responsible for neurodegeneration in Alzheimer’s disease. Over the last 20 years, evidence has accumulated that implicates the N-terminus of Aβ as a region that may initiate the formation of damaging oligomeric species. Our laboratory has previously studied macrocyclic β-hairpin peptides derived from Aβ(16–22) and Aβ(30–36,) capable of forming hexamers that can be observed by X-ray crystallography and SDS-PAGE. To better mimic oligomers of full length Aβ, we use an orthogonal protecting group strategy during the synthesis to append residues from Aβ(1–14) to the parent macrocyclic β-hairpin peptide 1, which comprises Aβ(16–22) and Aβ(30–36). The N-terminally extended peptides N+1, N+2, N+4, N+6, N+8, N+10, N+12, and N+14 assemble to form dimers, trimers, and hexamers in solution-phase studies. X-ray crystallography reveals that peptide N+1 assembles to form a hexamer that is composed of dimers and trimers. These observations are consistent with a model in which the assembly of Aβ oligomers is driven by hydrogen bonding and hydrophobic packing of the residues from the central and C-terminal regions, with the N-terminus of Aβ accommodated by the oligomers as an unstructured tail.
- Published
- 2020
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