1. QTL Analysis of β-Glucan Content and Other Grain Traits in a Recombinant Population of Spring Barley.
- Author
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Gianinetti A, Ghizzoni R, Desiderio F, Morcia C, Terzi V, and Baronchelli M
- Subjects
- Phenotype, Chromosomes, Plant genetics, Edible Grain genetics, Edible Grain metabolism, Genotype, Seeds genetics, Seeds metabolism, Seeds chemistry, Plant Breeding, Recombination, Genetic genetics, Haplotypes, Hordeum genetics, Hordeum metabolism, Quantitative Trait Loci, beta-Glucans metabolism, Chromosome Mapping, Polymorphism, Single Nucleotide
- Abstract
Barley with high grain β-glucan content is valuable for functional foods. The identification of loci for high β-glucan content is, thus, of great importance for barley breeding. Segregation mapping for the content in β-glucan and other barley grain components (starch, protein, lipid, ash, phosphorous, calcium, sodium) was performed using the progeny of the cross between Glacier AC38, a mutant with high amylose, and CDC Fibar, a high β-glucan waxy cultivar. The offspring of this cross showed transgressive segregation for β-glucan content. Linkage analysis based on single-nucleotide polymorphism (SNP) molecular markers was used for the genotyping of the parents and recombinant inbred lines (RILs). Two Quantitative Trait Loci (QTL) for β-glucan content and several QTL for other grain components were found. The former ones, located on chromosomes 1H and 7H, explained 27.9% and 27.4% of the phenotypic variance, respectively. Glacier AC38 provided the allele for high β-glucan content at the QTL on chromosome 1H, whereas CDC Fibar contributed the allele at the QTL on chromosome 7H. Their recombination resulted in a novel haplotype with higher β-glucan content, up to 18.4%. Candidate genes are proposed for these two QTL: HvCslF9 , involved in β-glucan biosynthesis, for the QTL on chromosome 1H; Horvu_PLANET_7H01G069300 , a gene encoding an ATP-Binding Cassette (ABC) transporter, for the QTL on chromosome 7H.
- Published
- 2024
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