1. Quinolinonyl Non-Diketo Acid Derivatives as Inhibitors of HIV-1 Ribonuclease H and Polymerase Functions of Reverse Transcriptase.
- Author
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Messore A, Corona A, Madia VN, Saccoliti F, Tudino V, De Leo A, Ialongo D, Scipione L, De Vita D, Amendola G, Novellino E, Cosconati S, Métifiot M, Andreola ML, Esposito F, Grandi N, Tramontano E, Costi R, and Di Santo R
- Subjects
- Anti-HIV Agents chemical synthesis, Anti-HIV Agents metabolism, HeLa Cells, Humans, Magnesium metabolism, Microbial Sensitivity Tests, Molecular Docking Simulation, Mutagenesis, Site-Directed, Mutation, Protein Binding, Quinolones chemical synthesis, Quinolones metabolism, Reverse Transcriptase Inhibitors chemical synthesis, Reverse Transcriptase Inhibitors metabolism, Ribonuclease H, Human Immunodeficiency Virus genetics, Ribonuclease H, Human Immunodeficiency Virus metabolism, Virus Replication drug effects, Anti-HIV Agents pharmacology, HIV-1 enzymology, Quinolones pharmacology, Reverse Transcriptase Inhibitors pharmacology, Ribonuclease H, Human Immunodeficiency Virus antagonists & inhibitors
- Abstract
Novel anti-HIV agents are still needed to overcome resistance issues, in particular inhibitors acting against novel viral targets. The ribonuclease H (RNase H) function of the reverse transcriptase (RT) represents a validated and promising target, and no inhibitor has reached the clinical pipeline yet. Here, we present rationally designed non-diketo acid selective RNase H inhibitors (RHIs) based on the quinolinone scaffold starting from former dual integrase (IN)/RNase H quinolinonyl diketo acids. Several derivatives were synthesized and tested against RNase H and viral replication and found active at micromolar concentrations. Docking studies within the RNase H catalytic site, coupled with site-directed mutagenesis, and Mg
2+ titration experiments demonstrated that our compounds coordinate the Mg2+ cofactor and interact with amino acids of the RNase H domain that are highly conserved among naïve and treatment-experienced patients. In general, the new inhibitors influenced also the polymerase activity of RT but were selective against RNase H vs the IN enzyme.- Published
- 2021
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