8 results on '"Narangajavana, Jarunya"'
Search Results
2. Development and mapping of functional expressed sequence tag-derived simple sequence repeat markers in a rubber tree RRIM600 3 PB217 population
- Author
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Nirapathpongporn, Kanlaya, Kongsawadworakul, Panida, Viboonjun, Unshira, Teerawattanasuk, Kanikar, Chrestin, Hervé, Seguin, Marc, Clément-Demange, André, and Narangajavana, Jarunya
- Subjects
Hevea brasiliensis ,food and beverages ,F30 - Génétique et amélioration des plantes - Abstract
Sets of polymorphic expressed sequence tag–simple sequence repeat (EST-SSR) markers from the rubber tree (Hevea brasiliensis) have been published by many researchers, but none has been specifically developed to study latex and wood yield traits. In this study, a total 10,321 rubber tree EST sequences, generated from suppression subtractive hybridization-cDNA libraries of bark and latex of high- and low-yielding clones, were used as sources for SSR searching. A total of 432 EST-SSR loci were identified and it was possible to design primer pairs for a subset of 298 EST-SSRs. The highest proportion of EST-SSRs was represented by dinucleotide repeats (46.6 %), followed by trinucleotide repeats (44.3 %). Based on BLASTX analysis, 234 ESTs (80 %) showed similarity to genes in NCBI databases and could be divided into 120 putative proteins with known function and 114 unknown proteins. To enhance the resolution of an existing linkage map from previous work on a rubber tree RRIM600 × PB217 population, 69 EST-SSR markers from the above set were tested to be integrated into the reference genetic map. The enriched map of 18 linkage groups spanned 2054.2 cM in length, showed an average genetic distance of 4.3 cM between adjacent markers, and included 63 new EST-SSR markers. The enhanced map from this study provides a basis for comparative mapping using PCR-based markers and identification of expressed genes possibly affecting important traits of interest.
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- 2016
3. Specific promoters for genetic engineering of the rubber tree; molecular and functional analysis : [Draft]
- Author
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Pujade-Renaud, Valérie, Sanier, Christine, Cambillau, Laurence, Tharreau, Didier, Puangkosol, N., Montoro, Pascal, Chrestin, Hervé, and Narangajavana, Jarunya
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Hevea brasiliensis ,F30 - Génétique et amélioration des plantes - Published
- 2004
4. Functional analysis of promoter sequences from Hevea brasiliensis hevein genes, in rice and rubber tree [S05-32]
- Author
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Pujade-Renaud, Valérie, Arokiaraj, P., Jones, Heddwyn, Sanier, Christine, Cambillau, Laurence, Tharreau, Didier, Narangajavana, Jarunya, and Chrestin, Hervé
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Résistance génétique ,Séquence nucléotidique ,fungi ,food and beverages ,Transformation génétique ,Agrobacterium ,Oryza ,F30 - Génétique et amélioration des plantes ,Hevea brasiliensis ,Expression des gènes - Abstract
The 5' upstream region of two highly homologous hevein genes from rubber tree (PHev2.1 and PHev2.3) were isolated. Hevein is a small lectine-like protein pertaining to the group of type IV Pathogenesis-Related proteins. In rubber tree, it is located in latex cells exclusively and participates in the latex coagulation processes. It has antifungal properties in vitro. The 1.8 kb PHev2.1 promoter sequence fused to the GUS reporter gene was introduced in rice by Agrobacterium-mediated transformation. It appeared to be functional both in leaves, roots and anthers. It was activated in response to mechanical wounding in leaves, both directly and systemically, raising the promoter activity level close to that of the 35S promoter. Additionally, a 1.2 to 1.6 fold activation was observed after inoculation with the rice pathogen Magnaporthe grisea. These results are in agreement with the presence on the sequence of potential regulatory elements involving biotic and abiotic stress signal transduction hormones. The 0.9 kb PHev2.3 promoter sequence and derived deleted -fragments, fused to the GUS reporter gene, were introduced in rubber tree callus by Agrobacterium-mediated transformation. All fragments were functional, both in callus and embryoids. Tissue specificity as well as the response to biotic and abiotic stresses will be analyzed in the regenerated transgenic plants. The regulation properties observed confirm the expected role of hevein in defense. Moreover, the functionality of the hevein promoter both in dicots (rubber tree) and monocots (rice) opens the doors for a utilization in various homologous or heterologous systems, in genetic engineering programs aiming to increase the protection against biotic or abiotic stresses. (Texte intégral)
- Published
- 2003
5. Differential expression of mitochondrial pyruvate dehydrogenase gene correlates with latex yield and tapping in rubber tree.
- Author
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CHUENWARIN, Paweena, KONGSAWADWORAKUL, Panida, CHRESTIN, Hervé, NARANGAJAVANA, Jarunya, and VIBOONJUN, Unchera
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GENE expression in plants ,RUBBER plants ,LATEX ,PLANT yields ,PLANT mitochondria ,PYRUVATE dehydrogenase kinase ,STATISTICAL correlation - Abstract
Natural rubber (cis-1,4-polyisoprene) is a product of the isoprenoid biosynthesis pathway which requires an allylic pyrophosphate and isopentenyl pyrophosphate (IPP) to initiate and elongate the rubber molecule. The biosynthesis of IPP occurs via two distinct routes: the mevalonate (MVA) and methylerythritol phosphate (MEP) pathways. In this study, the expression of 34 genes related to rubber biosynthesis were compared between high and low latex yielding trees of two rubber tree clones, PB 217 and PB 260. Almost all tested genes revealed no significantly differential expression related to latex yield. Only mitochondrial pyruvate dehydrogenase (PDCE1) showed specific up-regulation in the high latex yielding trees of both tested clones. Interestingly, the expression of PDCE1 involving in the production of acetyl-CoA in mitochondria was also significantly induced by latex loss upon tapping. The increasing of acetyl-CoA and energy production may favor rubber tree to produce more latex. The in silico analysis showed that HbPDCE1 promoter contained ethylene and copper-responsive elements. Ethylene is worldwide used rubber stimulant while copper sulfate was also reported to be able to stimulate the latex yield. This suggested that HbPDCE1 may be transcriptionally regulated by these two compounds however the in vivo regulation of this gene should be further investigated. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
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6. Characterization of Polypeptides Accumulated in the Latex Cytosol of Rubber Trees Affected by the Tapping Panel Dryness Syndrome.
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Sookmark, Unchera, Pujade-Renaud, Valérie, Chrestin, Hervé, Lacote, Régis, Naiyanetr, Chinda, Seguin, Marc, Romruensukharom, Phayao, and Narangajavana, Jarunya
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PLANT cells & tissues ,BARK ,POLYPEPTIDES ,CYTOPLASM ,ELECTROPHORESIS - Abstract
The tapping panel dryness (TPD) syndrome of rubber is characterized by the reduction or ultimately total cessation of latex flow upon tapping, due to physiological disorders in the bark tissue. The protein pattern in the cytoplasm from healthy and TPD tree latex cells was compared by electrophoresis. Two polypeptides (P15 and P22) of 15 and 22 kDa, respectively, were found to accumulate in the cytosol of the TPD-affected trees, whereas a 29 kDa polypeptide (P29) appeared de novo. P15 and P22 were identified as REF (Hev b1) and SRPP (Hev b3), respectively, two proteins proposed to be involved in rubber biosynthesis. P29 appeared to be a new member of the patatin-like protein family. Specific molecular probes were designed for a detailed characterization of REF and SRPP gene expression and RFLP mapping. This allowed the demonstration that REF and SRPP display very similar expression profiles. They are highly over-expressed by the tapping-induced metabolic activation, although not by wounding per se, or ethylene or ABA. In addition to this similarity in gene expression, they were found to share one common locus in the genome. No significant difference in REF and SRPP gene expression was observed between healthy and TPD trees, indicating that their TPD-related accumulation in the cytosol was not transcriptionally regulated. Western blot analysis demonstrated that osmotic lysis of the sedimentable organelles (lutoids) in vitro caused the release of REF and SRPP from the rubber particle membrane into the cytosol. A mechanism of cellular delocalization as a consequence of the lutoids instability is proposed to explain REF and SRPP accumulation in the cytosol of TPD trees. [ABSTRACT FROM PUBLISHER]
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- 2002
- Full Text
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7. Hormonal treatment of the bark of rubber trees (Hevea brasiliensis) increases latex yield through latex dilution in relation with the differential expression of two aquaporin genes
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Tungngoen, Kessarin, Viboonjun, Unchera, Kongsawadworakul, Panida, Katsuhara, Maki, Julien, Jean-Louis, Sakr, Soulaiman, Chrestin, Hervé, and Narangajavana, Jarunya
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HEVEA , *BARK , *LATEX , *GENE expression in plants , *AUXIN , *ABSCISIC acid , *PLANT proteins , *AQUAPORINS , *TONOPLASTS - Abstract
Abstract: Natural rubber is synthesized in laticifers in the inner liber of the rubber tree (Hevea brasiliensis). Upon bark tapping, the latex is expelled due to liber turgor pressure. The mature laticifers are devoid of plasmodesmata; therefore a corresponding decrease in the total latex solid content is likely to occur due to water influx inside the laticifers. Auxins and ethylene used as efficient yield stimulants in mature untapped rubber trees, but, bark treatments with abscisic acid (ABA) and salicylic acid (SA) could also induce a transient increase latex yield. We recently reported that there are three aquaporin genes, HbPIP2;1, HbTIP1;1 and HbPIP1;1, that are regulated differentially after ethylene bark treatment. HbPIP2;1 was up-regulated in both the laticifers and the inner liber tissues, whereas HbTIP1;1 was up-regulated in the latex cells, but very markedly down-regulated in the inner liber tissues. Conversely, HbPIP1;1 was down-regulated in both tissues. In the present study, HbPIP2;1 and HbTIP1;1 showed a similar expression in response to auxin, ABA and SA, as seen in ethylene stimulation, while HbPIP1;1 was slightly regulated by auxin, but neither by ABA nor SA. The analysis of the HbPIP1;1 promoter region indicated the presence of only ethylene and auxin responsive elements. In addition, the poor efficiency of this HbPIP1;1 in increasing plasmalemma water conductance was confirmed in Xenopus oocytes. Thus, an increase in latex yield in response to all of these hormones was proposed to be the major function of aquaporins, HbPIP2;1 and HbTIP1;1. This study emphasized that the circulation of water between the laticifers and their surrounding tissues that result in latex dilution, as well as the probable maintenance of the liber tissues turgor pressure, favor the prolongation of latex flow. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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- View/download PDF
8. Molecular characterization of new members of the Hevea brasiliensis hevein multigene family and analysis of their promoter region in rice
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Pujade-Renaud, Valérie, Sanier, Christine, Cambillau, Laurence, Pappusamy, Arokiaraj, Jones, Heddwyn, Ruengsri, Natsuang, Tharreau, Didier, Chrestin, Hervé, Montoro, Pascal, and Narangajavana, Jarunya
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HEVEA , *GENES , *INFECTION , *PROTEINS - Abstract
Abstract: The cloning of hevein genes from Hevea brasiliensis was undertaken with the objective to isolate useful promoters to drive transgene expression in genetically engineered rubber tree. Four different full length genes were cloned by library screening and a fifth, a partial gene, by adaptor-anchored PCR. Sequence alignment revealed that hevein genes, although highly conserved in their transcribed region, diverged in two groups, with major differences in their promoter region, suggesting a more rapid evolution of the upstream regulatory functions of the genes than the downstream functions of their protein products. The promoter regions from two hevein genes representative of each group were isolated and analyzed in rice. Although both were functional, only the longest promoter sequence (PHev2.1) conferred a high level of expression to the transgene in various tissues of this heterologous host. It was in addition up-regulated by mechanical wounding and fungal infection in leaves. A number of potential cis-regulatory elements were identified in silico and are discussed in view of the expression profiles observed in rice. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
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