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Key Message: Two new downy mildew resistance genes, Pl 37 and Pl 38 , were introgressed from wild sunflower species into cultivated sunflower and mapped to sunflower chromosomes 4 and 2, respectively Downy mildew (DM), caused by the oomycete pathogen Plasmopara halstedii (Farl.) Berl. & de Toni, is known as the most prevalent disease occurring in global sunflower production areas, especially in North America and Europe. In this study, we report the introgression and molecular mapping of two new DM resistance genes from wild sunflower species, Helianthus annuus and H. praecox, into cultivated sunflower. Two mapping populations were developed from the crosses of HA 89/H. annuus PI 435417 (Pop1) and CMS HA 89/H. praecox PRA-417 (Pop2). The phenotypic evaluation of DM resistance/susceptibility was conducted in the BC 1 F 2 -derived BC 1 F 3 populations using P. halstedii race 734. The BC 1 F 2 segregating Pop1 was genotyped using an Optimal GBS AgriSeq™ Panel consisting of 768 mapped SNP markers, while the BC 1 F 2 segregating Pop2 was genotyped using a genotyping-by-sequencing approach. Linkage analysis and subsequent saturation mapping placed the DM resistance gene, designated Pl 37 , derived from H. annuus PI 435417 in a 1.6 cM genetic interval on sunflower chromosome 4. Pl 37 co-segregated with SNP markers SPB0003 and C4_5738736. Similarly, linkage analysis and subsequent saturation mapping placed the DM resistance gene, designated Pl 38 , derived from H. praecox PRA-417 in a 0.8 cM genetic interval on sunflower chromosome 2. Pl 38 co-segregated with seven SNP markers. Multi-pathotype tests revealed that lines with Pl 37 or Pl 38 are immune to the most prevalent and virulent P. halstedii races tested. Two germplasm lines, HA-DM15 with Pl 37 and HA-DM16 with Pl 38 , were developed for use in sunflower DM-resistance breeding., (© 2023. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)

Key Message: We have mapped a new downy mildew resistance gene, Pl 35 , derived from wild Helianthus argophyllus to sunflower linkage group 1. New germplasms incorporating the Pl 35 gene were developed for both oilseed and confection sunflower Sunflower downy mildew (DM), caused by the oomycete pathogen Plasmopara halstedii, is an economically important and widespread sunflower disease worldwide. Non-race-specific resistance is not available in sunflower, and breeding for DM resistance relies on race-specific resistance to control this disease. The discovery of the novel DM resistance genes is a long-term task due to the highly virulent and aggressive nature of the P. halstedii pathogen, which reduces the effectiveness of resistance genes. The objectives of this study were to: (1) transfer DM resistance from a wild sunflower species Helianthus argophyllus (PI 494576) into cultivated sunflowers; (2) map the resistance gene; and (3) develop diagnostic single-nucleotide polymorphism (SNP) markers for efficient targeting of the gene in breeding programs. The H. argophyllus accession PI 494576 previously identified with resistance to the most virulent P. halstedii race 777 was crossed with oilseed and confection sunflower in 2012. Molecular mapping using the BC 2 F 2 and BC 2 F 3 populations derived from the cross CONFSCLB1/PI 494576 located a new resistance gene Pl 35 on linkage group 1 of the sunflower genome. The new gene Pl 35 was successfully transferred from PI 494576 into cultivated sunflowers. SNP markers flanking Pl 35 were surveyed in a validation panel of 548 diversified sunflower lines collected globally. Eleven SNP markers were found to be diagnostic for Pl 35 SNP alleles, with four co-segregating with Pl 35 . The developed oilseed and confection germplasms with diagnostic SNP markers for Pl 35 will be very useful resources for breeding of DM resistance in sunflower.

Sunflower oil is one of the major sources of edible oil. As the second largest hybrid crop in the world, hybrid sunflowers are developed by using the PET1 cytoplasmic male sterility system that contributes to a 20 % yield advantage over the open-pollinated varieties. However, sunflower production in North America has recently been threatened by the evolution of new virulent pathotypes of sunflower rust caused by the fungus Puccinia helianthi Schwein. Rf ANN-1742, an 'HA 89' backcross restorer line derived from wild annual sunflower (Helianthus annuus L.), was identified as resistant to the newly emerged rust races. The aim of this study was to elucidate the inheritance of rust resistance and male fertility restoration and identify the chromosome location of the underlying genes in Rf ANN-1742. Chi-squared analysis of the segregation of rust response and male fertility in F(2) and F(3) populations revealed that both traits are controlled by single dominant genes, and that the rust resistance gene is closely linked to the restorer gene in the coupling phase. The two genes were designated as R ( 11 ) and Rf5, respectively. A set of 723 mapped SSR markers of sunflower was used to screen the polymorphism between HA 89 and the resistant plant. Bulked segregant analysis subsequently located R ( 11 ) on linkage group (LG) 13 of sunflower. Based on the SSR analyses of 192 F(2) individuals, R ( 11 ) and Rf5 both mapped to the lower end of LG13 at a genetic distance of 1.6 cM, and shared a common marker, ORS728, which was mapped 1.3 cM proximal to Rf5 and 0.3 cM distal to R ( 11 ) (Rf5/ORS728/R ( 11 )). Two additional SSRs were linked to Rf5 and R ( 11 ): ORS995 was 4.5 cM distal to Rf5 and ORS45 was 1.0 cM proximal to R ( 11 ). The advantage of such an introduced alien segment harboring two genes is its large phenotypic effect and simple inheritance, thereby facilitating their rapid deployment in sunflower breeding programs. Suppressed recombination was observed in LGs 2, 9, and 11 as it was evident that no recombination occurred in the introgressed regions of LGs 2, 9, and 11 detected by 5, 9, and 22 SSR markers, respectively. R ( 11 ) is genetically independent from the rust R-genes R ( 1 ), R ( 2 ), and R ( 5 ), but may be closely linked to the rust R-gene R ( adv ) derived from wild Helianthus argophyllus, forming a large rust R-gene cluster of R ( adv )/R ( 11 )/R ( 4 ) in the lower end of LG13. The relationship of Rf5 with Rf1 is discussed based on the marker association analysis.

A five year field trial evaluated 71 oilseed sunflower, Helianthus annuus L., accessions, 32 breeding lines, and 25 interspecific crosses for resistance to infestation by naturally occurring populations of the banded sunflower moth, Cochylis hospes Walsingham (Lepidoptera: Tortricidae), in North Dakota. Germplasm with resistance to attack by the banded sunflower moth and subsequent larval feeding damage in the seeds was identified. PI 251902 had less than 10% feeding damage per head in all five years of testing and less than 6% in three of the five years. PI 372259 and PI 170401 exhibited 12% or less seed damage in three years of evaluation and PI 253776 had only 3% damage in two of the three years and was the least damaged in 2004. Four other accessions (PI 170385, PI 291403, PI 494859, and PI 505651) revealed resistance in three of five years. A number of the interspecific crosses which were retested based on earlier results showed reduced seed damage in 2003, but subsequently exhibited much greater damage the following year due to higher populations of banded sunflower moth. Hybrid 894 was earlier used by others as a susceptible check; however, in the current investigation, this hybrid consistently had the lowest average seed damage from C. hospes feeding among the germplasm evaluated. Results from this investigation indicate that there is potential for developing resistant genotypes with reduced feeding injury that will help sunflower producers reduce yield loss due to the banded sunflower moth. In addition, plant resistance can effectively be combined with delayed planting to decrease densities of C. hospes, thus reducing crop losses without disrupting the control of the larvae by parasitoids. [ABSTRACT FROM AUTHOR]