1. Design strategies to target crystallographic waters applied to the Hsp90 molecular chaperone
- Author
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Kung, Pei-Pei, Sinnema, Piet-Jan, Richardson, Paul, Hickey, Michael J., Gajiwala, Ketan S., Wang, Fen, Huang, Buwen, McClellan, Guy, Wang, Jeff, Maegley, Karen, Bergqvist, Simon, Mehta, Pramod P., and Kania, Robert
- Subjects
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DRUG design , *TARGETED drug delivery , *ENZYME inhibitors , *MOLECULAR chaperones , *WATER , *MOLECULAR structure , *X-ray crystallography , *DRUG synergism , *PYRIMIDINES , *HEAT shock proteins - Abstract
Abstract: A series of novel and potent small molecule Hsp90 inhibitors was optimized using X-ray crystal structures. These compounds bind in a deep pocket of the Hsp90 enzyme that is partially comprised by residues Asn51 and Ser52. Displacement of several water molecules observed crystallographically in this pocket using rule-based strategies led to significant improvements in inhibitor potency. An optimized inhibitor (compound 17) exhibited potent Hsp90 inhibition in ITC, biochemical, and cell-based assays (K d =1.3nM, K i =15nM, and cellular IC50 =0.5μM). [Copyright &y& Elsevier]
- Published
- 2011
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