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We conducted a large-scale assessment of unconventional oil and gas (UOG) development effects on brook trout ( Salvelinus fontinalis ) distribution. We compiled 2231 brook trout collection records from the Upper Susquehanna River Watershed, USA. We used boosted regression tree (BRT) analysis to predict occurrence probability at the 1:24,000 stream-segment scale as a function of natural and anthropogenic landscape and climatic attributes. We then evaluated the importance of landscape context (i.e., pre-existing natural habitat quality and anthropogenic degradation) in modulating the effects of UOG on brook trout distribution under UOG development scenarios. BRT made use of 5 anthropogenic (28% relative influence) and 7 natural (72% relative influence) variables to model occurrence with a high degree of accuracy [Area Under the Receiver Operating Curve (AUC) = 0.85 and cross-validated AUC = 0.81]. UOG development impacted 11% ( n = 2784) of streams and resulted in a loss of predicted occurrence in 126 (4%). Most streams impacted by UOG had unsuitable underlying natural habitat quality ( n = 1220; 44%). Brook trout were predicted to be absent from an additional 26% ( n = 733) of streams due to pre-existing non-UOG land uses (i.e., agriculture, residential and commercial development, or historic mining). Streams with a predicted and observed (via existing pre- and post-disturbance fish sampling records) loss of occurrence due to UOG tended to have intermediate natural habitat quality and/or intermediate levels of non-UOG stress. Simulated development of permitted but undeveloped UOG wells ( n = 943) resulted in a loss of predicted occurrence in 27 additional streams. Loss of occurrence was strongly dependent upon landscape context, suggesting effects of current and future UOG development are likely most relevant in streams near the probability threshold due to pre-existing habitat degradation. [ABSTRACT FROM AUTHOR]

Throughout the Central Appalachians of the United States resource extraction primarily from coal mining has contributed to the majority of the forest conversion to barren and reclaimed pasture and grass. The loss of forests in this ecoregion is significantly impacting biodiversity at a regional scale. Since not all forest stands provide equal levels of ecological functions, it is critical to identify and map existing forested resources by the benefits that accrue from their unique spatial patterns, watershed drainage, and landscape positions. We utilized spatial analysis and remote sensing techniques to define critical forest characteristics. The characteristics were defined by applying a forest fragmentation model utilizing morphological image analysis, defining headwater catchments at a 1 : 24,000 scale, and deriving ecological land units (ELUs) from elevation data. Once critical forest values were calculated, it was possible to identify clusters of critical stands using spatial statistics. This spatially explicit method for modeling forest habitat could be implemented as a tool for assessing the impact of resource extraction and aid in the conservation of critical forest habitat throughout a landscape. [ABSTRACT FROM AUTHOR]

As watershed-scale studies of stream fishes become increasingly common, there is a need for more accurate estimation of fish population abundance and size structure with single-pass electrofishing techniques. Capture efficiencies are known to vary considerably across habitats and species, yet few studies have quantified or provided a logical framework for accounting for this variability. Consequently, our objectives were to (1) determine which species and which size-classes within species exhibited significant site-to-site variation in electrofishing efficiency and (2) construct models to predict species- and size-specific capture probability from physicochemical parameters. We used three-pass removal sampling to capture fishes from 40 study sites located in wadeable streams in the Cheat River and Tygart Valley River watersheds of West Virginia. The program MARK was used to estimate capture probabilities for 12 commonly sampled fishes, to assess among-site variability in capture probability, and to model variability in capture probability as a function of fish size and readily measured environmental covariates. Our results indicated that for most species sampled (9 of 12), some combination of these covariates-mean stream width, gradient, specific conductivity, and species size-class-could be used to produce a model of capture probability superior to the most complex model that accounted for site-to-site variability in capture probability. One species demonstrated constant capture probability among sites, and two others exhibited significant site-to-site variation in capture probability that could not be accounted for using any of the measured covariates. Our results provide a basis for using single-pass electrofishing data to infer population-level phenomena (e.g., relative abundance, size structure) in watershed-scale studies of stream fish assemblages. [ABSTRACT FROM AUTHOR]

1. We used observational and experimental field studies together with an individual-based simulation model to demonstrate that behaviours of mottled sculpin ( Cottus bairdi) were broadly consistent with the expectations of Giving-Up Density theory and an Ideal Pre-emptive Distribution habitat selection model. 2. Specifically we found that: (i) adult mottled sculpin established territories within patches characterised by significantly higher prey densities and prey renewal rates than patches occupied by juveniles or randomly selected patches; (ii) patches abandoned by adult sculpin possessed significantly lower prey densities than newly occupied patches, although this was not true for juveniles; (iii) the observed giving-up density (GUD) for adult sculpin (i.e. average prey density in patches recently abandoned) increased linearly with increasing fish size up to the average prey density measured in randomly selected patches (i.e. 350 prey items per 0.1 m2) and decreased with increasing sculpin density and (iv) juveniles rapidly shifted their distribution towards the highest quality patches following removal of competitively dominant adult sculpin. 3. These results provide the first evidence of the applicability of GUD theory to a stream-dwelling organism, and they elucidate the underlying factors influencing juvenile and adult sculpin habitat selection and movement behaviours. Furthermore, optimal patch use, ideal pre-emptive habitat selection and juvenile ‘floating’ provide behavioural mechanisms linking environmental heterogeneity in the stream benthos to density-dependent regulation of mottled sculpin populations in this system. [ABSTRACT FROM AUTHOR]

Large-scale culvert replacement programs could benefit migratory fish populations by reconnecting reproductive and foraging habitats in fragmented watersheds. The objectives of this study were to: (1) identify stream and culvert characteristics contributing to fish passage barriers within an Appalachian watershed, U.S.A.; (2) quantify the total amount of Brook trout ( Salvelinus fontinalis) reproductive habitat isolated above culverts; and (3) use an ecological currency to identify culvert replacement priorities and stream mitigation credit opportunities. We surveyed 120 state-owned culverts and used a fish passage assessment filter to determine the “passability” of each culvert. We then constructed a geographic information system stream network model to quantify the amount of trout reproductive habitat isolated by culverts. Ninety-seven percent of surveyed culverts were classified as obstacles or complete barriers to trout dispersal. Culvert impassability was higher in small streams with slopes exceeding 3–5%, suggesting a direct relationship between slope and impassability. Thirty-three percent of Brook trout reproductive habitat, representing over 200 km of stream, was isolated by culverts. This is a conservative estimate, because we did not survey privately or federally owned culverts. The top 20 prioritized culverts accounted for nearly half of the habitat loss. Our results indicate that standard culvert designs placed in streams with slopes exceeding 5% consistently produce trout dispersal barriers and should be avoided during new road construction. The process developed here provides an efficient method for identifying culvert replacement priorities and may be used to maximize watershed scale benefits of stream restoration. [ABSTRACT FROM AUTHOR]

Salamanders are important members of faunal communities in Appalachian Mountain (USA) streams, and the use of salamanders as bioindicators is increasing. Roads are a part of the modern landscape, but effects of roads on stream and streamside salamander diversity and abundance is not clear. We sampled streams in central West Virginia, USA, using quadrats placed along transects in the flowing channel, dry channel, and stream bank to assess salamander diversity, richness, and abundance during 2004. We used Akaike's Information Criterion for model selection at reach (i.e., above and below culverts) and stream scales. Salamander diversity and richness was affected by elevation, stream gradient, canopy cover, and the presence of roads. Overall, stream and riparian habitat quality was the most important factor affecting salamander richness. The presence of roads, stream gradient, and elevation received the most empirical support for predicting species' abundances. Roads benefited disturbance-tolerant species but negatively affected other species. Impacts of roads and culverts on habitat should be considered by federal and state transportation agencies and natural resources agencies during the planning process and addressed through mitigation efforts. Managers should install culverts that are as wide as the stream channel, at grade with the streambed, and dominated by rubble substrate to provide maximum benefit for salamanders. [ABSTRACT FROM AUTHOR]

We used strong inference with Akaike's Information Criterion (AIC) to assess the processes capable of explaining long-term (1984-1995) variation in the per capita rate of change of mottled sculpin (Cottus bairdi) populations in the Coweeta Creek drainage (USA). We sampled two fourth- and one fifth-order sites (BCA [uppermost], BCB, and CC [lowermost]) along a downstream gradient, and the study encompassed extensive flow variation. Physical habitat availability varied significantly both within and among the sites. Sculpin densities in all sites were highly stable (coefficients of variation = 0.23-0.41) and sampling variability was low (coefficients of variation = 0.11-0.15). Population stability was positively associated with habitat stability, and the only significant correlations of population parameters among sites involved juveniles. Sculpin densities were significantly higher in BCB than in CC. The data suggest that, despite their proximity, the dynamics of populations within the sites are being determined by small-scale (i.e., 30-50 m) rather than broad-scale spatial processes. Both AIC and Dennis and Taper analyses indicated that simple density dependence had the greatest ability to explain variation in r for all life-history classes in all sites (AIC, seven of nine cases; Dennis and Taper, nine of nine cases). Multiprocess models had little explanatory power. When adults were removed from two sites, juvenile sculpin shifted into microhabitats formerly occupied by adults. No shifts occurred in control sites. Consequently, it is likely that the patterns of density dependence observed in all three sites were a consequence of intraspecific competition for space. Our findings argue for a multitiered approach to the study of population variation, one that encompasses long-term monitoring, spatial variation, and experimental testing of potential mechanisms. [ABSTRACT FROM AUTHOR]