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The influence of habitat complexity on biodiversity is a central theme in ecology, with many studies reporting positive relationships. Reconciliation approaches in urbanised areas, such as eco‐engineering, have increasingly focused on 're‐building' the complexity of degraded and/or homogenised habitats to support biodiversity. Yet, the effects of increasing complexity and biodiversity on ecological functions are rarely measured.We assessed how increasing the physical and/or biogenic complexity of habitats affects the net primary productivity (NPP) and gross primary productivity (GPP), community respiration and nutrient cycling (specifically dissolved inorganic phosphorus and nitrogen) of intertidal sessile marine communities at three sites. We manipulated physical complexity using two types of settlement tiles: 'complex', with crevices and ridges, and 'flat'. We increased biogenic complexity on half the replicates of each tile type by seeding with oysters.Increased physical and biogenic complexity resulted in greater sessile species richness at all sites. Although many variables assessed varied with sites and time of measurements, overall, GPP and NPP were greater on flat tiles than on complex ones. These patterns were not explained by differences in the total surface area of tiles.Daily flux rates of dissolved inorganic phosphorus had a significant positive relationship with biogenic complexity. There were no effects of biogenic or physical complexity on the net fluxes of dissolved inorganic nitrogen.Effects of habitat complexity on the productivity and nutrient cycling of marine sessile communities were largely unrelated to diversity measures, such as richness or abundance of key taxa and functional groups.Synthesis and applications. Eco‐engineering practices that manipulate habitat complexity might benefit from explicit functional targets that also consider associated ecosystem services, as we found that under some conditions there is a trade‐off between biodiversity and functional targets. Our results suggest that increasing habitat complexity has a positive effect on sessile species richness, but not necessarily on productivity (GPP and NPP). The species pool available as well as light availability is likely to mediate effects of complexity on assemblages, so local environment needs to be a key consideration when designing interventions. [ABSTRACT FROM AUTHOR]

Abstract: Habitat complexity is accepted as a general mechanism for increasing the abundance and diversity of communities. However, the circumstances under which complexity has the strongest effects are not clear. Over 20 degrees of Australia's east coast, we tested whether the effects of within‐site structural habitat complexity on the diversity and community structure of sessile marine invertebrates was consistent over a latitudinal gradient where environmental conditions and species composition vary. We used experimental arrays with varied structural treatments to detect whether community cover, species richness, diversity and community composition (β‐diversity) changed with increasing complexity. Community response to complexity varied over latitude due to differences in species richness and community development. Increased complexity had the greatest positive effects on community cover and species richness at higher latitudes where recruitment and growth were low. At lower latitudes, community cover and species richness were higher overall and did not vary substantially between complexity treatments. Latitudinal variation in within‐treatment β‐diversity relative to complexity further suggest divergent community responses. At higher latitudes, increased similarity in more complex treatments suggests community dominance of successful taxonomic groups. Despite limited effects on species richness and community cover at lower latitudes, β‐diversity was higher in more complex treatments, signifying potential positive effects of increased complexity at these sites. These results demonstrate the context‐dependency of complexity effects in response to variation in species richness and community development and should be taken into consideration to help direct conservation and restoration efforts. [ABSTRACT FROM AUTHOR]

Marine Protected Areas (MPAs) are a key management tool for the conservation of biodiversity and restoration of marine communities. While large, well-designed and enforced MPAs have been found to be effective, results from small MPAs vary. The Hawkesbury Shelf, a coastal bioregion in New South Wales, Australia, has ten small, near-shore MPAs known as Aquatic Reserves with a variety of protection levels from full no-take to partial protection. This study assessed the effectiveness of these MPAs and analysed how MPA age, size, protection level, wave exposure, habitat complexity, and large canopy-forming algal cover affected fish, invertebrate and benthic communities. We found aspect, protection level, complexity and algal canopy to be important predictors of communities in these MPAs. Most MPAs, however, were not effective in meeting their goals. Only full no-take protection (three out of ten MPAs) had a significant impact on fish assemblages. One no-take MPA—Cabbage Tree Bay—which is naturally sheltered from wave action and benefits from an active local community providing informal enforcement, accounted for most of the increased richness of large fish and increased biomass of targeted fish species. Our findings suggest that small MPAs can enhance biodiversity and biomass on a local scale but only if they have full no-take protection, are in sheltered locations with complex habitat, and have positive community involvement to engender support and stewardship. These results provide a baseline for robust assessment of the effectiveness of small MPAs and inform future management decisions and small MPA design in other locations. [ABSTRACT FROM AUTHOR]

Novel combinations of climatic conditions due to climate change and prolonged fire seasons have contributed to an increased occurrence of "megafires". Such large-scale fires pose an unknown threat to biodiversity due to the increased extent and severity of burn. Assessments of wildfires often focus on terrestrial ecosystems and effects on aquatic habitats are less documented, particularly in coastal environments. In a novel application of eDNA techniques, we assessed the impacts of the 2019–2020 Australian wildfires on the diversity of estuarine benthic sediment communities in six estuaries in NSW, Australia, before and after the fires. Estuaries differed in area of catchment burnt (0–92%) and amount of vegetative buffer that remained post-fire between burnt areas and waterways. We found greater dissimilarities in the composition and abundance of eukaryotic and bacterial sediment communities in estuaries from burnt catchments with no buffer compared to those with an intact buffer or from unburnt catchments. Shifts in composition in highly burnt catchments were associated with increased concentrations of nutrients, carbon, including fire-derived pyrogenic carbon, and copper, which was representative of multiple highly correlated trace metals. Changes in the relative abundances of certain taxonomic groups, such as sulfate-reducing and nitrifying bacterial groups, in the most impacted estuaries indicate potential consequences for the functioning of sediment communities. These results provide a unique demonstration of the use of eDNA to identify wildfire impacts on ecological communities and emphasize the importance of vegetative buffers in limiting wildfire-associated impacts. [Display omitted] • Estuarine benthic eukaryotic and bacterial community composition changed post-fire. • Greater differences were observed in severely burnt compared to unburnt catchments. • Changes were associated with increased sediment py-C, TOC, Cu and nutrients. • Shifts in certain bacterial groups may have implications for sediment functioning. • EDNA is a useful tool for rapid assessment of wildfire impacts in aquatic systems. [ABSTRACT FROM AUTHOR]

Habitat complexity strongly affects the structure and dynamics of ecological communities, with increased complexity often leading to greater species diversity and abundance. However, habitat complexity changes as communities develop, and some species alter their environment to themselves provide habitat for other species. Most experimental studies manipulate basal substrate complexity, and while the importance of complexity likely changes during community development, few studies have examined the temporal dynamics of this variable. We used two experiments to quantify the importance of basal substrate complexity to sessile marine invertebrate community development through space and time. First, we compared effects of substrate complexity at 70 sites across ten estuaries. Sites differed in recruitment and community development rates, and after three months provided spatial variation in community development stage. Second, we tested for effects of substrate complexity at multiple times at a single site. In both experiments, complexity affected marine sessile invertebrate community composition in the early stages of community development when resource availability was high. Effects of complexity diminished through time as the amount of available space (the primary limiting resource) declined. Our work suggests the presence of a bare-space threshold, at which structural complexity of the basal substrate is overwhelmed by secondary biotic complexity. This threshold will be met at different times depending on local recruitment and growth rates and is likely to vary with productivity gradients. [ABSTRACT FROM AUTHOR]

Survival of incipient non-indigenous populations is dramatically altered by early predation on new colonisers. These effects can be influenced by morphological traits, such as coloniser size and density. The Australian non-native Pacific Oyster Crassostrea gigas is generally more fecund and faster growing compared to the native Saccostrea glomerata found in the same habitat. It is therefore important to quantify how the two species differ in survival across coloniser density and predation gradients. This information could become pertinent to the management of wild and aquaculture populations of the non-native C. gigas. Using a field-based factorial experiment we model the survival of incipient populations of both the native S. glomerata and the non-indigenous C. gigas as a function of coloniser density, predator reduction and individual size. Unexpectedly, survival of the non-indigenous C. gigas increased compared to S. glomerata when individuals were larger. The proportional survival of newly colonised oyster populations also increased with larger initial populations, regardless of species identity. Further, predator reduction resulted in increased survival of both oyster species, irrespective of coloniser size or initial density. Here we quantitatively demonstrate the effects of recruit density and size on enhancing the survivability of incipient oyster populations. [ABSTRACT FROM AUTHOR]

Natural systems are increasingly being modified by the addition of artificial habitats which may facilitate invasion. Where invaders are able to disperse from artificial habitats, their impact may spread to surrounding natural communities and therefore it is important to investigate potential factors that reduce or enhance invasibility. We surveyed the distribution of non-indigenous and native invertebrates and algae between artificial habitats and natural reefs in a marine subtidal system. We also deployed sandstone plates as experimental 'reefs' and manipulated the orientation, starting assemblage and degree of shading. Invertebrates (non-indigenous and native) appeared to be responding to similar environmental factors (e.g. orientation) and occupied most space on artificial structures and to a lesser extent reef walls. Non-indigenous invertebrates are less successful than native invertebrates on horizontal reefs despite functional similarities. Manipulative experiments revealed that even when non-indigenous invertebrates invade vertical "reefs", they are unlikely to gain a foothold and never exceed covers of native invertebrates (regardless of space availability). Community ecology suggests that invertebrates will dominate reef walls and algae horizontal reefs due to functional differences, however our surveys revealed that native algae dominate both vertical and horizontal reefs in shallow estuarine systems. Few non-indigenous algae were sampled in the study, however where invasive algal species are present in a system, they may present a threat to reef communities. Our findings suggest that non-indigenous species are less successful at occupying space on reef compared to artificial structures, and manipulations of biotic and abiotic conditions (primarily orientation and to a lesser extent biotic resistance) on experimental "reefs" explained a large portion of this variation, however they could not fully explain the magnitude of differences. [ABSTRACT FROM AUTHOR]

Artificial structures associated with shipping and boating activities provide habitats for a diverse suite of non-indigenous marine species. Little is known about the proportion of invader success in nearby waters that is attributable to these structures. Areas close to piles, wharves and piers are likely to be exposed to increasing levels of propagule pressure, enhancing the recruitment of non-indigenous species. Recruitment of non-indigenous and native marine biofouling taxa were evaluated at different distances from a large commercial shipping pier. Since artificial structures also represent a desirable habitat for fish, how predation on marine invertebrates influences the establishment of non-indigenous and native species was also evaluated. The colonisation of several non-indigenous marine species declined rapidly with distance from the structure. Little evidence was found to suggest that predators have much influence on the colonisation success of marine sessile invertebrate species, non-indigenous or otherwise. It is suggested that propagule pressure, not predation, more strongly predicts establishment success in these biofouling assemblages. [ABSTRACT FROM AUTHOR]

The article discusses a study which analyzed evidence of the in situ effects of contaminant sources on fish abundance and species richness. The study also highlighted the role of fish ecology in determining contaminant impacts, mechanisms of impact, and areas for future research. In the meta-analysis conducted, it was suggested that the abundance of fish assemblages in coral reefs was negatively impacted by contaminants and that these reefs are more sensitive than other habitats. Also observed were weak trends for species richness.

Abstract: Anthropogenic stresses such as metal contamination can have profound ecological impacts in a wide range of habitats. Reduced survival of organisms in contaminated habitats has the potential to result in the evolution of genotypes tolerant to deleterious contaminants. Local adaptation to contamination requires directional selection, genetic variation in traits relating to tolerance, spatial variability in exposure to the contaminant and limited gene flow between populations. This study assesses variation in tolerance in the herbivorous marine invertebrate Peramphithoe parmerong whose algal diets in Sydney Harbour readily accumulate the metal copper. A quantitative genetics approach (a full-sib, split family design) was used to quantify variation among families in survival on the contaminated diet. A significant genotype-by-environment interaction in offspring survival between the copper contaminated and uncontaminated diet treatments revealed variation in tolerance to copper by P. parmerong. Amphipods that survived 30 days of exposure to copper contaminated diets were slightly smaller and ate less algae than those reared on uncontaminated food. This reflects an additional sub-lethal effect associated with the consumption of contaminated algae. However, there was no evidence of acclimation to contaminated diets, nor a cost of reduced feeding for those genotypes with increased tolerance. This study provides strong evidence for the potential of a marine invertebrate to evolve tolerance to contaminants found in their diet. [Copyright &y& Elsevier]

Abstract: We determined metal contents of co-occurring algae Padina crassa and Sargassum sp. in Port Jackson (Australia), and relationships between metal levels and the abundance of epifaunal amphipods. Copper, lead and zinc concentrations were amongst the highest yet recorded in these algae. Copper, manganese and lead concentrations were far greater in P. crassa than Sargassum sp., possibly due to the low growth of P. crassa in proximity to contaminated sediments. However, in manipulative experiments the proximity of algae to sediments did not explain these differences. The abundance of herbivorous amphipods correlated negatively with the copper content of P. crassa, but not with the lower concentrations in Sargassum sp. The greater contamination of P. crassa led to patchy distributions of metals in algal beds and recolonisation experiments showed Sargassum sp. acts as a refuge from contaminants for epifauna. The contamination of macroalgae may pose threats to epifauna in harbours around the world. [Copyright &y& Elsevier]

Habitat-forming organisms are frequently used as biomonitors in marine environments due to a widespread ability to accumulate toxic contaminants. Few studies, however, have considered the consequences of these accumulated contaminants on the abundant and diverse fauna associated with these habitats. In this review, we summarize research which has investigated the contamination of biogenic habitats (including seagrasses, macroalgae, ascidians, sponges and bivalve reefs) and the impact of this contamination on the habitat use, feeding behaviour and survival of associated epifauna. In many cases, ecological impacts upon epifauna are not simply predicted by levels of contamination in their habitat, but are determined by the foraging, feeding and reproductive behaviours of the inhabiting organisms. Thus, a thorough understanding of these ecological processes is essential in order to understand the effects of contaminants upon epifaunal communities. The scope of biomonitoring studies which assess the contamination of biogenic habitats should be expanded to include an assessment of potential effects upon associated epifauna. When combined with manipulative field experiments such an approach would greatly assist in our understanding of indirect effects of contaminants in these important benthic habitats. [Copyright &y& Elsevier]

Strategies for managing biological invasions are often based on the premise that characteristics of invading species and the invaded environment are key predictors of the invader's distribution. Yet, for either biological traits or environmental characteristics to explain distribution, adequate time must have elapsed for species to spread to all potential habitats. We compiled and analyzed a database of natural history and ecological traits of 138 coastal marine invertebrate species, the environmental conditions at sites to which they have been introduced, and their date of first introduction. We found that time since introduction explained the largest fraction (20%) of the variability in non-native range size, while traits of the species and environmental variables had significant, but minimal, influence on non-native range size. The positive relationship between time since introduction and range size indicates that non-native marine invertebrate species are not at equilibrium and are still spreading, posing a major challenge for management of coastal ecosystems. [ABSTRACT FROM AUTHOR]

Understanding the processes that govern species distributions is a fundamental goal of ecology. Species differ in patterns of resource-use due to differences in response to biotic and environmental factors. Some species dominate favourable habitat through competitively superiority, while others have evolved to exploit niches of abiotic stress where competition is low. We observed interspecific differences in the use of horizontal and vertical habitats by Antarctic bryozoa. The most spatially dominant species, Inversiula nutrix , mainly occupied horizontal surfaces, while nine other bryozoan species mainly occupied vertical surfaces. We hypothesized that this spatial segregation may be due to either competitive displacement of other species by I. nutrix , or tolerance of I. nutrix to an environmental stress associated with horizontal orientation. To investigate this we quantified competitive interactions between all species, and conducted a manipulative field experiment to test effects of sedimentation on bryozoan growth. We found that I. nutrix was not a superior competitor, but was more tolerant of sedimentation than were other species. Despite mediocre competitive ability, tolerance to a stressor has allowed I. nutrix to occupy resources unavailable to the other species, and thereby gain spatial dominance within the community. [ABSTRACT FROM AUTHOR]

Marine artificial structures such as pilings are replacing natural habitats, and modifying surrounding areas, often resulting in local decreases in species diversity and facilitation of bioinvasion. Most research on the impacts of artificial structures in marine ecosystems has primarily focused on rocky bottom habitats and biodiversity, overlooking the effects of these structures on the functioning of nearby sedimentary habitats. Here we compared, for the first time, benthic metabolism (O 2 fluxes) and sediment-water nutrient (inorganic nitrogen, phosphate, and dissolved organic nitrogen) fluxes in shallow water sediments adjacent to pilings and natural reefs. We also measured sediment properties (grain size, total organic carbon, total nitrogen, C:N ratio and chlorophyll-a content). We found that sediments near pilings were generally finer with greater C:N ratios than those near reefs, while differences in other sediment properties between types of habitats were dependent on the site. We found significant differences in the oxygen consumption, primary productivity, and net ecosystem metabolism in sediments around pilings compared to sediments near natural reefs, but these patterns differed by site. Net nutrient fluxes were similar in sediments near pilings and reefs at both sites. This study showed that although pilings can be associated with changes in the functioning of sedimentary habitats, patterns and the direction of change seem to vary depending on local conditions. • Marine artificial structures such as pilings are often built on soft sedimentary habitats. • Pilings can alter nearby sediment functioning compared to sediments near reefs via changes to flow, biodiversity, and shade • We compared properties and ecological functions of sediments adjacent to pilings and natural rocky reefs. • Grain size was smaller and C:N ration was higher in sediments near pilings than near reefs. • Benthic fluxes varied between structures, but differences were local dependent. [ABSTRACT FROM AUTHOR]

Coastal systems are increasingly impacted by human activities. While the direct effects of individual contaminants have been investigated, the potential for multiple contaminants to impact adjacent hard substrate habitats is poorly understood. Sediment-bound contaminants pose a risk to water column organisms through resuspension and the fluxing of dissolved nutrients and metals. This study experimentally manipulated contaminated coastal sediments in mesocosms with additions of a common fertiliser to investigate the impact on both bacterial biofilms and macrofouling communities on nearby hard substrates. Field mesocosms were deployed sub-tidally for two weeks in a fully crossed design with two levels of metal contamination (ambient or high) and three levels of organic enrichment (ambient, low and high). Developing biofilm and macrofaunal communities were collected on acetate settlement sheets above the mesocosm sediments and censused with a combination of high-throughput sequencing (biofilm) and microscopy (macrofauna). Organic enrichment of sediments induced compositional shifts in biofilm communities, reducing their diversity, evenness and richness. Furthermore, co-occurrence networks built from microbial assemblages exposed to contaminated sediments displayed reduced connectivity compared to controls, suggesting a more stochastic assembly dynamic, where microbial interactions are reduced. Macrofouling community composition shifted in response to increased enrichment with separate and interactive effects of metals also observed for individual taxa. Specifically, antagonistic stressor interactions were observed for colonial ascidians and arborescent bryozoans; metal contamination decreased abundances of these taxa, except under high enrichment conditions. Together these micro- and macrofaunal responses indicate selection for depauperate, but contaminant-tolerant, communities and a potential breakdown in biotic connectivity through multiple stressor impacts across habitat boundaries. [ABSTRACT FROM AUTHOR]

Extensive development and construction in marine and coastal systems is driving a phenomenon known as “ocean sprawl”. Ocean sprawl removes or transforms marine habitats through the addition of artificial structures and some of the most significant impacts are occurring in sedimentary environments. Marine sediments have substantial social, ecological, and economic value, as they are rich in biodiversity, crucial to fisheries productivity, and major sites of nutrient transformation. Yet the impact of ocean sprawl on sedimentary environments has largely been ignored. Here we review current knowledge of the impacts to sedimentary ecosystems arising from artificial structures. Artificial structures alter the composition and abundance of a wide variety of sediment-dependent taxa, including microbes, invertebrates, and benthic-feeding fishes. The effects vary by structure design and configuration, as well as the physical, chemical, and biological characteristics of the environment in which structures are placed. The mechanisms driving effects from artificial structures include placement loss, habitat degradation, modification of sound and light conditions, hydrodynamic changes, organic enrichment and material fluxes, contamination, and altered biotic interactions. Most studies have inferred mechanism based on descriptive work, comparing biological and physical processes at various distances from structures. Further experimental studies are needed to identify the relative importance of multiple mechanisms and to demonstrate causal relationships. Additionally, past studies have focused on impacts at a relatively small scale, and independently of other development that is occurring. There is need to quantify large-scale and cumulative effects on sedimentary ecosystems as artificial structures proliferate. We highlight the importance for comprehensive monitoring using robust survey designs and outline research strategies needed to understand, value, and protect marine sedimentary ecosystems in the face of a rapidly changing environment. [ABSTRACT FROM AUTHOR]

Ecosystem engineers can influence biodiversity by enhancing complexity, and modifying the availability of resources. Understanding the mechanisms by which ecosystem engineers shape biodiversity is central to the concept of ‘ecological engineering’ of anthropogenic structures to enhance biodiversity. Here the presence and complexity of artificial turf was manipulated on an artificial structure to test the hypothesis that the colonisation of sessile invertebrates and mobile epibiota would vary with habitat complexity. Both sessile and mobile assemblage compositions differed according to the presence of artificial turf, and its complexity. Sessile invertebrates occupied greater proportions of available space on topographically simple ‘blank’ surfaces or low complexity artificial turf than those with high complexity turf, whereas mobile taxa were generally more abundant on the turf. However, the mobile assemblage was unrelated to the sessile assemblage when examined within each level of initial substrata complexity. Contrary to the increasing number of studies demonstrating nested hierarchical relationships between co-occurring ecosystem engineers, this study provides an example of an ecosystem engineer mimic (artificial turf) leading to the formation of habitat mosaics at small scales. The introduction of complex substrata to otherwise topographically simple artificial structures is a promising means of actively influencing assemblage composition. [ABSTRACT FROM AUTHOR]

Ecological observation of global change processes is dependent on matching the scale and quality of biological data with associated geophysical and geochemical driver information. Until recently, the scale and quality of biological observation on natural assemblages has often failed to match data generated through physical or chemical platforms due to constraints of cost and taxonomic resolution. With the advent of next-generation DNA sequencing platforms, creating 'big data' scale observations of biological assemblages across a wide range of phylogenetic groups are now a reality. Here we draw from a variety of studies to illustrate the potential benefits and drawbacks of this new data source for enhancing our observation of ecological change compared with traditional methods. We focus on a key habitat--estuaries--which are among the most threatened by anthropogenic change processes. When community composition data derived using morphological and molecular approaches were compared, the increased level of taxonomic resolution from the molecular approach allowed for greater discrimination between estuaries. Apart from higher taxonomic resolution, there was also an order of magnitude more taxonomic units recorded in the molecular approach relative to the morphological. While the morphological data set was constrained to traditional macroinvertebrate sampling, the molecular tools could be used to sample a wide range of taxa from the microphytobenthos, e.g., diatoms and dinoflagellates. Furthermore, the information provided by molecular techniques appeared to be more sensitive to a range of well-established drivers of benthic ecology. Our results indicated that molecular approaches are now sufficiently advanced to provide not just equivalent information to that collected using traditional morphological approaches, but rather an order of magnitude bigger, better, and faster data with which to address pressing ecological questions. [ABSTRACT FROM AUTHOR]