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20 páginas.- 13 figuras.- 1 tabla.- referencias.- The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/feart.2021.642667/full#supplementary-material .- This article is part of the Research Topic Cave Deposits: Processes, Approaches and Environmental Significance, Caves are dark subsurface environments with relatively constant temperatures that allow studying bio-mineralization processes and paleoenvironmental or climate changes in optimal conditions. In the extreme and oligotrophic cave environment, manganese patinas having stromatolite-like features are uncommon. Here we provide the first detailed mineralogical, geochemical, and microbiological investigation of fine-grained and poorly crystalline MnFe stromatolite-like wall patinas formed in a deep-cave environment in Italy. These mineralizations, about 3 mm thick, consist of an alternation of Mn-layers and Fe-lenses. We show that the microbial communities' composition is dominated by Mn-oxidizing bacteria, such as Bacillus, Flavobacterium, and Pseudomonas. Our multidisciplinary investigation, integrating data from different analytical techniques (i.e., optical microscopy, SEM-EDS, μXRF, XRPD, FT-IR, Raman spectroscopy, and DNA sequencing), revealed peculiar chemical, mineralogical, and biological features: 1) A cyclical oscillation of Mn and Fe along the growth of the patinas. We propose that this oscillation represents the shift between oxic and suboxic conditions related to different phases occurring during paleo-flood events; 2) A typical spatial distribution of mineralogy and oxidation state of Mn, bacterial imprints, detrital content, and stromatolite-like morphologies along the Mn-layers. We propose that this distribution is controlled by the local hydraulic regime of the paleo-floods, which, in turn, is directly related to the morphology of the wall surface. Under less turbulent conditions, the combination of clay mineral catalysis and biological oxidation produced vernadite, a poor-crystalline phyllomanganate with a low average oxidation state of Mn, and branched columnar stromatolite-like morphologies. On the other hand, under more turbulent conditions, the sedimentation of clay minerals and microbial communities' development are both inhibited. In this local environment, a lower oxidation rate of Mn2+ favored the formation of todorokite and/or ranciéite, two compounds with a high average oxidation state of Mn, and flat-laminated or columnar stromatolite-like morphologies., The Spanish project MINECO CGL 2016-75590-P with ERDF funds is gratefully acknowledged. LJ acknowledge funding from Fundação de Amparo a Pesquisa do Estado de São Paulo (FAPESP) grant 2018/17061-6.

33 páginas.- 14 figuras.- 3 tablas.- 97 referencias.- Supporting information, Fetida Cave is an active sulfuric acid cave influenced by seawater, showing abundant microbial communities that organize themselves under three main different morphologies: water filaments, vermiculations and moonmilk deposits. These biofilms/deposits have different cave distribution, pH, macro- and microelement and mineralogical composition, carbon and nitrogen content. In particular, water filaments and vermiculations had circumneutral and slightly acidic pH, respectively, both had abundant organic carbon and high microbial diversity. They were rich in macro- and microelements, deriving from mineral dissolution, and, in the case of water filaments, from seawater composition. Vermiculations had different color, partly associated with their mineralogy, and unusual minerals probably due to trapping capacities. Moonmilk was composed of gypsum, poor in organic matter, had an extremely low pH (0–1) and low microbial diversity. Based on 16S rRNA gene analysis, the microbial composition of the biofilms/deposits included autotrophic taxa associated with sulfur and nitrogen cycles and biomineralization processes. In particular, water filaments communities were characterized by bacterial taxa involved in sulfur oxidation and reduction in aquatic, aphotic, microaerophilic/anoxic environments (Campylobacterales, Thiotrichales, Arenicellales, Desulfobacterales, Desulforomonadales) and in chemolithotrophy in marine habitats (Oceanospirillales, Chromatiales). Their biodiversity was linked to the morphology of the water filaments and their collection site. Microbial communities within vermiculations were partly related to their color and showed high abundance of unclassified Betaproteobacteria and sulfur-oxidizing Hydrogenophilales (including Sulfuriferula), and Acidiferrobacterales (including Sulfurifustis), sulfur-reducing Desulfurellales, and ammonia-oxidizing Planctomycetes and Nitrospirae. The microbial community associated with gypsum moonmilk showed the strong dominance (>60%) of the archaeal genus Thermoplasma and lower abundance of chemolithotrophic Acidithiobacillus, metal-oxidizing Metallibacterium, Sulfobacillus, and Acidibacillus. This study describes the geomicrobiology of water filaments, vermiculations and gypsum moonmilk from Fetida Cave, providing insights into the microbial taxa that characterize each morphology and contribute to biogeochemical cycles and speleogenesis of this peculiar seawater-influenced sulfuric acid cave. © 2019 D’Angeli et al., C work was supported by UNIBO (Ricerca Fondamentale e Orientata—RFO) and the Rectorate of UNIBO. Funding for microbial analyses was provided by Europlanet 2020 15-EPN1-029 and 17-EPN3-021 grants. Europlanet 2020 RI has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 654208. Further funding was provided by the Spanish project MINECO CGL2016-75590-P with ERDF funds.

12 páginas.- 9 figuras.- 6 tablas.- 90 referencias, San Salvador (Bahamas) is a carbonate island with dozens of flank margin caves formed in the phreatic zone by fresh seawater mixing within the freshwater lens. These caves have no direct connection with the sea, and form at or close to the tidally influenced fluctuating water table. After sea-level fall, in their subaerial parts caves are enlarged mainly by rock dissolution and by erosion close to the water level, condensation-corrosion and breakdown processes. For understanding the geomorphological features observed in these caves and how they are related to light attenuation, we investigated three sampling sites in the tidally influenced zone of Lighthouse Cave, which has been re-invaded by seawater during the Holocene sea-level highstand. A freshwater lens no longer exists within or adjacent to the cave. Rock samples were collected above and below the internal lake shores close to the entrance, and in the twilight and dark zones of this cave. Light and electron microscopy examinations were conducted for detecting microbial cells, as well as bioconstruction and bioweathering features. In addition, a high precision laser scanner was used for characterising sample microtopography. Our data showed that the microtopography and geomorphology of the lake shore samples (cave entrance) are dominated by bioweathering, whereas the samples of the twilight and dark zones are controlled by a combination of both bioweathering and bioconstructive processes depending on light availability. Bioconstructive structures, such as semi-planar lamination, at the fluctuating water level of the Lighthouse Cave show that dissolution due to water mixing of sea and freshwater in the Holocene is no longer the most important speleogenetic process. We propose that the geomorphological evolution is strongly influenced by the degree of rock diagenesis more than the initial mechanism of speleogenesis., the support from the CEECIND/01147/2017 contract funded by Fundação para a Ciência e a Tecnologia (Portugal). Funding was also provided by the Spanish project MINECO CGL2016-75590-P with ERDF funds.