1. Analysis of cellulose synthase gene expression strategies in higher plants using RNA-sequencing data.
- Author
-
Padvitski TA, Galinousky DV, Anisimova NV, Baer GY, Pirko YV, Yemets AI, Khotyleva LV, Blume YB, and Kilchevsky AV
- Subjects
- Arabidopsis classification, Arabidopsis genetics, Arabidopsis metabolism, Eucalyptus classification, Eucalyptus metabolism, Fruit genetics, Fruit metabolism, Glucosyltransferases metabolism, High-Throughput Nucleotide Sequencing, Isoenzymes genetics, Isoenzymes metabolism, Multigene Family, Organ Specificity, Phaseolus classification, Phaseolus metabolism, Phylogeny, Plant Leaves genetics, Plant Leaves metabolism, Plant Proteins metabolism, Plant Roots genetics, Plant Roots metabolism, Plant Stems genetics, Plant Stems metabolism, Populus classification, Populus metabolism, Glycine max classification, Glycine max metabolism, Species Specificity, Transcriptome, Eucalyptus genetics, Gene Expression Regulation, Plant, Genome, Plant, Glucosyltransferases genetics, Phaseolus genetics, Plant Proteins genetics, Populus genetics, Glycine max genetics
- Abstract
The transcriptomes from different organs and tissues of western poplar, eucalyptus, soybean and common bean were studied. The expression level of cellulose synthase genes was notably different in different types of tissues and organs in studied plants. For common bean and eucalyptus transcriptome the domination of certain cellulose synthase genes was typical. These prevailing genes made up more than 50 % of the total expression pull of cellulose synthases. On the contrary, cellulose synthase expression pulls of wes-tern poplar and soybean were distributed between multiple genes. The different expression strategies of CesA-genes may reflect a phylogenetic processes that occurred in genomes studied.
- Published
- 2017