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The study of the antagonistic activity of eleven isolates of Trichoderma spp., against four isolates of Botrytis cinerea, collected from diseased tomato plants cultivated in greenhouses located on the Algiers coast and in the north-east of Sahara. The in vitro antagonism was compared to the fungicidal activity of "PROLEX", widely used by farmers against this phytopathogen in Algeria. The results revealed a complete inhibition of sporulation, germination, production and germination of sclerotia as well as morphological changes in vitro. A significant reduction on their pathogenicity and a strong inhibition of their sporulation were recorded in vivo. In conclusion, the Trichoderma spp. antagonists in particular, the "T4, T11, T8 and T10" isolates are therefore promising for the biocontrol of grey mould of tomato.

India is an agricultural country. Nearly 70% of the populations thrive in rural areas, engaged in agriculture making the backbone of our economy. The Trichoderma genus is widely distributed and provides an alternative to chemical pesticides in crops and plants growth. Trichoderma species are free living and commonly found in soil and root ecosystems. Root colonization by Trichoderma also regularly promotes growth and development of plants. They also perform beneficial and significant role in enhancing crop productivity, fight against pathogens, resistant to abiotic stress and increase of nutrients uptake from soil. The present study was undertaken to investigate quantitative and qualitative estimation of phosphate solubilizer by using nineteen isolates of Trichoderma grown on Pikovskaya’s Agar and NBRIP media. It was found that all isolates were capable of differentially utilizing 5 g/L TCP in NBRIP broth. This was indicated by the soluble phosphate concentrations and increase in acidity of growth medium. Out of 19 isolates, all isolates were capable in phosphate solubilization. However, the P- solubilizing efficiency was found higher in case of the isolate number-59 and 89. While isolate number-102 was the strongest and isolate number-23 was the weakest P-solubilizer. Minimum Phosphate solubilization concentration was observed in 3rd day (0%) that simultaneously increased on 7th day (52.63%) followed by 9th day (100%) and remaining all days 13th, 17th and 21st days also observed 100% efficiency.

This study aimed to reveal the roles of the protein kinase A catalytic subunit 1 (pkac1) and carbon catabolite repressor cre1 genes in cellulase production by Trichoderma reesei wild-type strain QM6a. Our strategy might be useful to construct a high-yielding cellulase strain for its wide application.This paper describes cellulase activity, plate conidiation, and yellow pigment synthesis assays of QM6a with the disruption of pkac1 and cre1.Deletion of pkac1 (Δpkac1) had no effect on cellulase production or transcript levels of major cellulase genes in the presence of cellulose. Disruption of cre1 (Δcre1) resulted in a remarkable increase in cellulase production and expression of the four major cellulase genes. Double disruption of pkac1 and cre1 significantly improved enzyme activity and protein production. The double disruption also resulted in a significant reduction in yellow pigment production and abrogated conidial production.Double deletion of pkac1 and cre1 led to increased hydrolytic enzyme production in T. reesei using cellulose as a carbon source.

The oomycetes of the genus Phytophthora have the most aggressive species for agriculture and forestry, such as Phytophthora sojae which is responsible for soybean root rot, Phytophthora infestans responsible for the potato downy mildew that caused the diaspora in Ireland in the nineteenth-century, and Phytophthora cinnamomi that afects a wide variety of tree species, from avocado in America, trees in Oceania to European chestnut trees. P. cinnamomi reproduces either sexually or asexually and asexual zoospores can live as saprotrophs and subsist in the soil long after death and removal of host plants. Controlling this organism is very challenging for researchers due to the limited range of efective chemical inhibitors. In this work, we present a systematic review of alternatives for biocontrol of Phytophthora in general and P. cinnamomi in particular. Our literature review indicates that Trichoderma spp., mainly Trichoderma harzianum, T. virens, and T. asperellum are very promising fungal species in the control of diferent Phytophthora spp. The Bacillus genus is also very promising in the control and inhibition of several Phytophthoras spp. The authors are grateful to the Foundation for Science and Technology (FCT, Portugal) and FEDER under Programme PT2020 for financial support to CIMO (UID/AGR/00690/2019). info:eu-repo/semantics/publishedVersion

Trichoderma spp. are ubiquitous soil-borne fungi that are widely used in biological control to promote and regulate healthy plant growth, as well as protect against plant pathogens. However, as with many biological materials, the relative instability of Trichoderma propagules limits its practical use in industrial applications. Therefore, there has been significant research interest in developing novel formulations with various carrier substances that are compatible with these fungal propagules and can enhance the shelf-life and overall efficacy of the Trichoderma. To this end, herein, we investigate the use of a variety of biopolymers and nanoparticles for the stabilization of Trichoderma atrobrunneum T720 conidia for biological control. The best-performing agents—agar and cellulose nanocrystals (CNC)—were then used in the preparation of oil-in-water emulsions to encapsulate conidia of T720. Emulsion properties including oil type, oil:water ratio, and biopolymer/particle concentration were investigated with respect to emulsion stability, droplet size, and viability of T720 conidia over time. Overall, agar-based formulations yielded highly stable emulsions with small droplet sizes, showing no evidence of drastic creaming, or phase separation after 1 month of storage. Moreover, agar-based formulations were able to maintain ~ 100% conidial viability of T720 after 3 months of storage, and over 70% viability after 6 months. We anticipate that the results demonstrated herein will lead to a new generation of significantly improved formulations for practical biological control applications., Applied Microbiology and Biotechnology, 107 (4), ISSN:0175-7598

In this study, the potential of some bio-agents, fluopyram and fosthiazate were investigated against root-knot nematodes (Meloidogyne spp.) on guava trees under field conditions for two successive seasons (2020 & 2021). The examined bio-agents were; Bio-Nematon® (Paecilomyces lilacinus), Bio Cure-F® (Trichoderma viridi), Bio Cure-B® (Pseudomonas fluorescens) and BIOTECT® (Bacillus thuringiensis var. kurstaki). The infection parameters of root-knot nematodes (Meloidogyne spp.) were recorded at 35 and 70 days after treatment. Results indicated that all the applied treatments suppressed the soil population density (J2/250g soil) at range of 68.75 to 88.85% during the 1st season, and from 57.72 to 92.92% during the 2nd season. Besides, the numbers of root galls were decreased at range of 60.22 to 77.11% and from 57.90 to 70.90% during 1st and 2nd seasons, respectively. Also, the number of isolated eggs from roots was decreased at range of 67.13 to 94.61% and from 51.37 to 88.45% during 1st and 2nd seasons, respectively. However, the content of total N, P and K (%) in leaves of guava trees was fluctuated during both seasons.

In this study, effects of single and combined applications of biocontrol agents; Trichoderma spp. (T. atroviride, T. virens) and plant growth promoting rhizobacteria (Pseudomonas koreensis, Bacillus subtilis) on growth, wilt disease severity caused by Verticillium dahliae and plant defence-related enzymes (peroxidase, polyphenol oxidase, phenylalanine ammonium lyase and β-1,3 glucanase) of eggplant, were investigated. It was determined that single and combined applications of biological control agents reduced the severity of wilt disease caused by the pathogen, and T. atroviride isolate and its combinations with bacteria were the most effective applications. Biological control agents not only increased plant growth parameters in the experimental groups they were applied, but also the activities of defence-related peroxidase, polyphenol oxidase, phenylalanine ammonium lyase and β-1,3 glucanase enzymes in the plant samples taken from these groups. Inoculations with biocontrol agents especially increased stem diameter, length, fresh and dry weights and root lengths of the eggplants, compared to the pathogen inoculated ones. Although the enzyme activities of the plants changed depending on the period after the inoculations, mostly found to be higher on the plants inoculated with the pathogen and/or biocontrol agents, compared to the non-inoculated control plants.

Endoglucanases are carbohydrate-degrading enzymes widely used for bioethanol production as part of the enzymatic cocktail. However, family 5 subfamily 5 (GH5_5) endoglucanases are still poorly explored in depth. The Trichoderma reesei representative is the most studied enzyme, presenting catalytic activity in acidic media and mild temperature conditions. Though biochemically similar, its modular structure and synergy with other components vary greatly compared to other GH5_5 members and there is still a lack of specific studies regarding their interaction with other cellulases and application on novel and better mixtures. In this regard, the threedimensional structure elucidation is a highly valuable tool to both uncover basic catalytic mechanisms and implement engineering techniques, proved by the high success rate GH5_5 endoglucanases show. GH5_5 enzymes must be carefully evaluated to fully uncover their potential in biomass-degrading cocktails: the optimal industrial conditions, synergy with other cellulases, structural studies, and enzyme engineering approaches. We aimed to provide the current understanding of these main topics, collecting all available information about characterized GH5_5 endoglucanases function, structure, and bench experiments, in order to suggest future directions to a better application of these enzymes in the industry.

BACKGROUND: Plants remain the natural sources of efficacious phytonutrients with beneficial assets to mankind against microbial disorders. Diverse folklores have reported the roles of medicinal plants in the remedies of various disorders in man and animals. Metabolites and pesticides from the plant origin are considered better alternatives due to favorable environmental impact as compared to the synthetic counterparts. Significant economic losses and hindrance of global papaya production are due to fungal diseases. Phytochemicals have made medicinal plants become sources of environmentally friendly alternative antimicrobials. AIM: This study aimed at assessing the antifungal activity of leaf extracts of Moringa oleifera against phytopathogenic fungi isolated from Carica papaya. METHODS: n-Hexane, ethyl acetate, ethanol, methanol, and aqueous extracts of M. oleifera leaves were evaluated for their antifungal properties. Agar well-diffusion method was implemented for in vitro screening, minimum inhibitory concentration (MIC) and minimum fungicidal concentration (MFC) of the extract types against fungal species of Aspergillus, Penicillium, Rhizopus, and Trichoderma. RESULTS: All the extracts evaluated inhibited fungal growth to some degree, with the aqueous extract exhibiting more inhibitory activities than the organic extracts. There was significant inhibition of fungal development by the tested plant extracts at different concentrations. MIC of the extracts was 15.625 mg/ml while the MFC values ranged between 15.625 and 31.25. In this work, the antifungal activity of M. oleifera was found to be equal or higher than commercially available fungicide, ketoconazole. CONCLUSION: The results of this study indicate that foliole extracts of M. oleifera have potential for use as biofungicides for plant protection against fungal diseases.

Trichoderma virens colonizes roots and develops a symbiotic relationship with plants where the fungal partner derives nutrients from plants and offers defence, in return. Tsp1, a small secreted cysteine-rich protein, was earlier found to be upregulated in co-cultivation of T. virens with maize roots. Tsp1 is well conserved in Ascomycota division of fungi, but none of its homologs have been studied yet. We have expressed and purified recombinant Tsp1, and resolved its structure to 1.25 A resolutions, from two crystal forms, using Se-SAD methods. The Tsp1 adopts a β barrel fold and forms dimer in structure as well as in solution form. DALI based structure analysis revealed the structure similarity with two known fungal effector proteins: Alt a1 and PevD1. Structure and evolutionary analysis suggested that Tsp1 belongs to a novel effector protein family. Tsp1 acted as an inducer of salicylic acid mediated susceptibility in plants, rendering maize plants more susceptible to a necrotrophic pathogen Cochliobolus heterostrophus, as observed using plant defence assay and RT-qPCR analysis.

Poultry farming contributes significantly to poverty alleviation by providing employment opportunities to Nigerians. Feed quality is the most prominent challenge of the poultry sector. This study was aimed at assessing the fungal and proximate qualities of poultry feeds sold in Benin City, Nigeria. Poultry feed samples (starter, grower and finisher) were obtained from five stores in Benin City. Enumeration and isolation of fungi was carried out using the spread plate method on potato dextrose agar and Aspergillus flavus and parasiticus agar (AFPA). Identification of fungal isolates was based on cultural and morphological characteristics. Proximate composition was determined by standard methods. The total fungal counts of starter, grower and finisher feeds ranged from 0.10 – 8.50 x 105 sfu/g. Fungal species isolated were Aspergillus flavus, Aspergillus niger, Penicillium spp., Saccharomyces spp., Trichoderma spp., Rhizopus spp. and Mucor spp. The results from proximate analysis were as follows: 36.50±0.92 - 70.92±0.51% (protein), 3.53±0.04 - 8.45±0.16% (fibre), 11.61±0.72 - 13.91±0.27% (fat), 2.70 - 8.60% (moisture content) and 3.65 - 37.83% (carbohydrate). The temperature and relative humidity of storage ranged from 33.90oC - 35.20oC and 69% - 75% respectively. Results showed that poultry feeds sampled have diverse fungi present in them. Control measures should be adhered to in poultry industries and stores to prevent microbial contamination.

Grey mould caused by Botrytis cinerea leads to severe economic loss on commercial tomato production. Application of beneficial microorganism offers an eco-friendly alternative for mitigation of tomato fungal disease damage, considering negative influences of fungicides. In the present study, an antagonistic Trichoderma afroharzianum isolate TM24 was evaluated for its biocontrol potential on tomato grey mould. The isolate TM24 showed obviously antagonistic effect on B. cinerea mycelium growth and production of glucanase and chitinase. Leaf spraying with spore suspension of isolate TM24 showed a biocontrol efficiency of over 54% against tomato grey mould in greenhouse pot experiment. The activities of plant defense-related enzymes including polyphenol oxidase, phenylalanine ammonialyase, superoxide dismutase, and peroxidase were all increased to varying degrees in tomato leaves after isolate TM24 treatment. Transcriptome analysis showed that, a total of 1941, 1753 and 38 differentially expressed genes (DEGs) were obtained at 24, 48 and 72 hpi, respectively, in tomato leaves pretreated with T. afroharzianum TM24, and then challenged with B. cinerea inoculation. The DEGs were mainly enriched in MAPK signaling pathway and plant hormones signal transduction pathway. Multiple genes that regulated crucial nodes of defense-related pathways, like flavonoid, phenylpropanoid, jasmonic acid and ethylene metabolisms were also identified, which may have positive correlations with the biocontrol potential of isolate TM24 in tomato plants. These promising results provided valuable information on using T. afroharzianum TM24 as a beneficial biocontrol agent in tomato grey mould management.

In the present work, the biotransformation of ginsenosides in white ginseng roots was innovatively investigated using the aerobic fermentation by the co-cultivation of Bacillus subtilis and Trichoderma reesei. It is found that in the co-cultivation mode, the optimal nitrogen source was corn steep liquor, and the loading of ginseng powder and inoculation proportion of B. subtilis and T. reesei were 15 g/L and 1:4, respectively. The total ginsenoside yield and production of minor ginsenosides in the co-cultivation mode obviously enhanced in comparison to the monoculture mode. Meanwhile, the maximal total ginsenoside yield of 21.79% and high hydrolase activities were achieved using the staged inoculation at the inoculation proportion of 1:4 in the co-cultivation mode, the production of minor ginsenosides such as Rg3 and Rh1, Rh2 was significantly strengthened, and the pharmacological activities of the fermented solution obviously improved. The enhancement of ginsenoside transformation can be mainly attributed to hydrolysis of the produced hydrolases and metabolism of two probiotics. This result clearly reveals that using the staged inoculation in co-cultivation fermentation mode was favor of the ginsenoside biotransformation in ginseng due to non-synchronous cell growth and different metabolic pathways of both probiotics. This work can provide a novel method for enhancing ginsenoside transformation of ginseng. Key points • Co-cultivation fermentation significantly promoted ginsenoside biotransformation. • The staged inoculation in co-culture mode was an optimal operation method. • The pharmacological activity of the co-cultured solution was significantly enhanced.

Global concern about food safety has led to increased interest in the study of food-spoilage fungi. Contaminated food affects human and animal health when such food items are consumed. This study was carried out to determine the fungi associated with stored corn in a bid to establishing their possible role in deterioration of corn. Using standard procedures, these fungi were isolated: Aspergillus, Trichoderma, Penicillium, and Rhizopus species. Results revealed the production of enzymes (protease, amylase, and lipase) by the fungi. The activity of these enzymes could play a role in the spoilage of corn by the fungi. In addition, the isolated fungi are known to be associated with postharvest yield losses in stored produce as well as producing toxins. Therefore, the data presented will help in choosing postharvest practices that will reduce contamination by these fungi. Protease activity values of the isolates ranged from 1.426±0.042 – 1.748±0.023µml-1 (in Aspergillus sp.), 1.599±0.018 – 1.990±0.019µml-1 (in Rhizopus sp.), 1.364±0.018 – 1.679±0.012µml-1 (in Trichoderma sp.) and (1.544±0.017 – 1.714±0.013 μml-1 (in Penicillium sp.). Amylase activity was highest in Rhizopus (1.625±0.054 – 1.790±0.013 μml-1), followed by Penicillium sp and lowest in Aspergillus sp. Lipase activity was highest in Penicillium and lowest in Aspergillus. The detection and identification of fungi are crucial to developing appropriate management strategies for stored corn. Postharvest losses due to these fungi will lead to reduced income for the farmers.

The aim of this study was to evaluate the pathogenicity of Bipolaris oryzae, the causal agent of brown spot disease on Egyptian rice cultivars. Sample of rice were collected from 10 cultivars namely (Sakha 101, Sakha 104, Sakha 106, Giza 176, Giza 177, Giza 178, Giza 182, Egyptian hybrid and Egyptian Yasmin). Fungal genera were recovered from the rice samples. These fungi were identified as(Curvularia lunata, Asprgillus niger, Asprgillus flavus, Penicillium sp., Trichoderma, Alternaria alternata, Bipolaris oryzae, Fusarium verticillioides, Fusarium chlamydosporum, Rhizopus oryzae, Curvularia tuberculate, Bipolaris hawaiiensis, Cephaliophora tropica and Negrospora sp.). Out of the fourteen fungi,Bipolaris oryzae (B. oryzae) was characterized as one of the highest frequently exists fungus. Ten isolates of B. oryzae were investigated in terms of spore dimension, number of septa of conidia, linear growth and culture color. These ten B. oryzae isolates were used in the pathogenicity test on five commercial rice cultivars (Sakha 108, Sakha super 300, Giza 177, Giza 182 and Egyptian hybrid. The disease severity was assessed 7days after inoculation, 21-days-old rice plants. The most aggressive B. oryzae isolates were B.o10, B.o7, B.o9 and B.o8. On the other hand, the lowest aggressive once were B.o2, and B.o1. Screening of the B. oryzae isolates on the commercial rice cultivars in the rice cultivation area in Egypt could help develop prediction plane of brown spot disease, ultimately, facilitate the most proper decision for rice cultivars to be cultivated.

The research work was done to assess the postharvest soil fungal population and to find out the relation between population dynamics of Trichoderma and soil borne disease of 41 eggplant cultivars. Soil samples collected from IPM lab germplasm maintenance field at post-harvest stage were analyzed for microbes in dilution plate technique. Fungal colonies appeared in each plate were counted and made their average. Incidence and severity of Fusarium wilt and Sclerotium collar rot in the plot of 41 eggplant varieties were recorded at flowering-fruiting stage. The highest total soil fungal population was estimated from the plot soil of eggplant var. Singnath S (IPM- 42) that was 40.75×104. The var. Bijoy had the lowest fungal population that was 7.5×104. A comparison between Trichoderma population and other fungal population was made. Different eggplant cultivars had variation in the population of two important soil fungi- Trichoderma and Fusarium. The total populations of Trichoderma and Fusarium in the plot soil of 41 eggplant varieties were 129.75 and 348.75 × 104 per gram of soil, respectively. The average number of colonies of Trichoderma varied with the range (1-8.25) per plate. Fusarium varied with the range from (2-22.50). In 20 important eggplant varieties out of 41, both Fusarium wilt and Sclerotium collar rot incidence ranged between 0.00 to 40.00%. The variety Puta begun had the highest incidence of Fusarium wilt with the highest soil population of Fusarium oxysporum against the absence of Trichoderma harzianum. The disease incidence at flowering-fruiting stage was negatively correlated with the population of Trichoderma. Disease severity decreased with the increase in Trichoderma population. Increase of Trichoderma population, decreased the population of other fungi (Fusarium oxysporum and Sclerotium rolfsii). These results are clearly indicating that Trichoderma might have the antagonistic potential and might contribute to the reduction of incidence of soil-borne diseases. Progressive Agriculture 32 (1): 31-42, 2021

Fungal symbionts occur in all plant tissues, and many aid their host plants with critical functions, including nutrient acquisition, defense against pathogens, and tolerance of abiotic stress. "Core" taxa in the plant mycobiome, defined as fungi present across individuals, populations, or time, may be particularly crucial to plant survival during the challenging seedling stage. However, studies on core seed fungi are limited to individual sampling sites, raising the question of whether core taxa exist across large geographic scales. We addressed this question using both culture-based and culture-free techniques to identify the fungi found in individual seeds collected from nine provenances across the range of coastal Douglas-fir (Pseudotsuga menziesii var. menziesii), a foundation tree species in the Pacific Northwest and a globally important timber crop that is propagated commercially by seed. Two key findings emerged: (i) Seed mycobiome composition differed among seed provenances. (ii) Despite variation in the seed mycobiome, we detected four core members, none of which is a known pathogen of Douglas-fir: Trichoderma spp., Hormonema macrosporum, Mucor plumbeus, and Talaromyces rugulosus. Our results support the concept of a core seed microbiome, yet additional work is needed to determine the functional consequences of core taxa for seedling germination, growth, survival, and competition.

A new highly oxygenated polyketide derivative, trichodersine (1), together with fourteen known compounds (2-15) were isolated from Trichoderma sp. MWTGP-04. The structure of trichodersine (1) was established based on comprehensive spectroscopic data analysis, and biogenesis argument. The results of double culture experiments indicated that the strain exhibited potential antifungal activity. The antifungal activities of all isolated compounds were evaluated, among them compound 1 exhibited remarkable antifungal activities against Fusarium solani, Plectosphaerella cucumerina, Alternaria panax, and Aspergillus niger, with minimum inhibitory concentrations (MICs) of 4, 4, 16, and 32 μg/mL, respectively. In addition, the antifungal experiments of polyketide derivatives (1-3) disclosed that their degree of oxidation was a key factor affecting the antifungal activity.

The investigation of lignocellulolytic catalysts is an important feature to face the challenges of lignocellulosic biomass valorization. In central Morocco, fungi were isolated from decaying wood, soil, olive crushing by-products and their compost. One hundred fifty-five isolates were submitted to a selective screening, which served to distinguish 83% of lignocellulolytic isolates. Then, a collection of 56 fungi was subjected to morphological and molecular identification with the ITS5 and ITS4 primers. This approach showed that 45% of the fungal population belonged to the genus Penicillium, followed by Aspergillus 14%, and Fusarium 11%. Alternaria, Trichoderma, Paecilomyces, Cladosporium, Trichocladium, Circinella, and Doratomyces genera are founded with a minority occurrence. Finally, validation of the enzymatic profile was done for 20 isolates, by testing their enzymatic performance on a liquid medium in the presence of cellulose, lignin, and olive pomace. The maximum protein production of 788 µg ml

The genusTrichodermais among the best studied groups of filamentous fungi, largely because of its high relevance in applications from agriculture to enzyme biosynthesis to biofuel production. However, the physiological competences of these fungi, that led to these beneficial applications are intriguing also from a scientific and ecological point of view. This review therefore summarizes recent developments in studies of fungal genomes, updates on previously started genome annotation efforts and novel discoveries as well as efforts towards bioprospecting for enzymes and bioactive compounds such as cellulases, enzymes degrading xenobiotics and metabolites with potential pharmaceutical value. Thereby insights are provided into genomes, mitochondrial genomes and genomes of mycoviruses ofTrichodermastrains relevant for enzyme production, biocontrol and mycoremediation. In several cases, production of bioactive compounds could be associated with responsible genes or clusters and bioremediation capabilities could be supported or predicted using genome information. Insights into evolution of the genusTrichodermarevealed large scale horizontal gene transfer, predominantly of CAZyme genes, but also secondary metabolite clusters. Investigation of sexual development showed thatTrichodermaspecies are competent of repeat induced point mutation (RIP) and in some cases, segmental aneuploidy was observed. Some random mutants finally gave away their crucial mutations likeT. reeseiQM9978 and QM9136 and the fertility defect of QM6a was traced back to its gene defect. TheTrichodermacore genome was narrowed down to 7000 genes and gene clustering was investigated in the genomes of multiple species. Finally, recent developments in application of CRISPR/Cas9 inTrichoderma, cloning and expression strategies for the workhorseT. reeseias well as the use genome mining tools for bioprospectingTrichodermaare highlighted. The intriguing new findings on evolution, genomics and physiology highlight emerging trends and illustrate worthwhile perspectives in diverse fields of research withTrichoderma.

Poor management of crop residues leads to environmental pollution and composting is a sustainable practice for addressing the challenge. However, knowledge about composting with pure crop straw is still limited, which is a novel and feasible composting strategy. In this study, pure corn straw was in-situ composted for better management. Community structure of β-glucosidase-producing microorganisms during composting was deciphered using high-throughput sequencing. Results showed that the compost was mature with organic matter content of 37.83% and pH value of 7.36 and pure corn straw could be composted successfully. Cooling phase was major period for cellulose degradation with the highest β-glucosidase activity (476.25 μmol·p-Nitr/kg·dw·min) and microbial diversity (Shannon index, 3.63; Chao1 index, 500.81). Significant compositional succession was observed in the functional communities during composting with Streptomyces (14.32%), Trichoderma (13.85%) and Agromyces (11.68%) as dominant genera. β-Glucosidase-producing bacteria and fungi worked synergistically as a network to degrade cellulose with Streptomyces (0.3045**) as the key community revealed by multi-interaction analysis. Organic matter (-0.415***) and temperature (-0.327***) were key environmental parameters regulating cellulose degradation via influencing β-glucosidase-producing communities, and β-glucosidase played a key role in mediating this process. The above results indicated that responses of β-glucosidase-producing microorganisms to cellulose degradation were reflected at both network and individual levels and multi-interaction analysis could better explain the relationship between variables concerning composting cellulose degradation. The work is of significance for understanding cellulose degradation microbial communities and process during composting of pure corn straw.

White mold and stem rot is a common disease of Phaseolus vulgaris caused by Sclerotinia sclerotiorum. Biological control is a promising alternative for the control of this disease. In the present study, two Trichoderma spp., T. erinaceum and T. viride, and the consortium of both were evaluated as biocontrol agents against sclerotinia stem rot disease. The results revealed that T. erinaceum (NAIMCC-F-02171) and T. viride (NAIMCC-F-02500) when applied alone, significantly suppressed the infection rate of S. sclerotiorum and increased the rate of survival of plants by 74.5%. On the contrary, the combination of both the Trichoderma spp. was found to be more effective in reducing stem rot by 57.2% and increasing the survival of plants by 87.5% when compared to the individual Trichoderma applications. Further, the exogenous supplementation of Trichoderma activated antioxidative machineries, such as peroxidase, polyphenol oxidase, superoxide dismutase, catalase, and ascorbic acid in the plant. Besides, hydrogen peroxide and superoxide-free radical accumulation were also found to be reduced when T. erinaceum and T. viride were used either individually or in combination under the pathogen-challenged condition. Additionally, the photopigments in the bioprimed plants were markedly increased. Moreover, the combined inoculation of the two isolates yielded the highest records of growth parameters (root weight, shoot length, and leaf weight) compared with individual inoculation. Therefore, based on the above results, it was concluded that the combination of T. erinaceum and T. viride can be effectively used as an alternative to control white mold and stem rot caused by S. sclerotiorum.

BACKGROUND Bacteria are the most diverse and abundant group of soil organisms that influence plant growth and health. Bacillus and Trichoderma are commonly used as biological control agents (BCA) that directly or indirectly act on soil bacteria. Therefore, it is essential to understand how the applied microbes impact the indigenous microbial community before exploring their activity in the control of soilborne diseases. RESULTS MiSeq sequencing of the 16S rRNA gene was used to decipher the shift of rhizosphere bacterial community in ginger (Zingiber officinale Roscoe) treated with Bacillus subtilus and Trichoderma harzianum at different concentrations. The dominant phyla in treated and nontreated samples were Proteobacteria, Actinobacteria, Acidobacteria and comprised up to 54.7% of the total sequences. There were significant differences between BCA treated and nontreated samples in the bacteria community. BCA treated plants presented higher bacterial diversity than nontreated and higher dosage of BCA had a larger impact on rhizosphere microbiota, but the 'dose-response relationship' varied in different bacterial groups. Potential biomarkers at genus level were found, such as RB41, Pseudomonas, Nitrospira, Candidatus_Udaeobacter. CONCLUSION The combined use of Bacillus subtilus and Trichoderma harzianum could alter bacterial community structure and diversity in rhizosphere soil. BCA-microbes interactions as well as soil microbial ecology should be noticed in plant disease management. © 2021 Society of Chemical Industry.

Allyl isothiocyanate (AITC), as a fumigant, plays an important role in soil control of nematodes, soil-borne pathogens, and weeds, but its effects on soil microorganisms are unclear. In this study, the effects of AITC on microbial diversity and community composition of Capsicum annuum L. soil were investigated through Illumina high-throughput sequencing. The results showed that microbial diversity and community structure were significantly influenced by AITC. AITC reduced the diversity of soil bacteria, stimulated the diversity of the soil fungal community, and significantly changed the structure of fungal community. AITC decreased the relative abundance of dominant bacteria Planctomycetes, Acinetobacter, Pseudodeganella, and RB41, but increased that of Lysobacter, Sphingomonas, Pseudomonas, Luteimonas, Pseudoxanthomonas, and Bacillus at the genera level, while for fungi, Trichoderma, Neurospora, and Lasiodiplodia decreased significantly and Aspergillus, Cladosporium, Fusarium, Penicillium, and Saccharomyces were higher than the control. The correlation analysis suggested cellulase had a significant correlation with fungal operational taxonomic units (OTUs) and there was a significant correlation between cellulase and fungal diversity, while catalase, cellulose, sucrase, and urease were the major contributors in the shift of the community structure. Our results will provide useful information for the use of AITC in the assessment of environmental and ecological security.

The effect of different levels of physiological maturation of the fruit and temperature on the seed germination and incidence of fungi that are harmful to the seeds, becomes fundamental for the improvement of the propagation of different native fruit species. The objective of this work was to evaluate the effect of physiological maturation and temperature on the germination and fungi incidence in Eugenia involucrata DC. seeds. Three experiments were carried out. In the experiment I, the effect of four levels of physiological maturation was evaluated, visually determined based on the color of the fruit, and in the experiment II, was evaluated the effect of two levels of maturation and two temperatures (25 and 35 °C) on the germination and vigor of the seeds. In the experiment III, was investigated the incidence of fungi in the seeds at two temperatures (25 and 35 °C). The levels of maturation evaluated did not influence the percentage of germinated seeds, but they influenced seed vigor. The temperature of 25°C was suitable for seed germination. The fungi genera found on the seeds were Trichoderma , Aspergillus , Fusarium , Penicillium , Alternaria, and Colletotrichum with variable incidences depending on evaluated temperature.

In this study, pot experiments were conducted on the seedlings of Pinus sylvestris var. mongolica to study the influence of Trichoderma ( Trichoderma harzianum E15) and Ectomycorrhizal fungi ( Suillus luteus N94) on the growth of these seedlings. In particular, the effects of these fungi on the fungal community structure in the rhizosphere soil of the seedlings were investigated. Inoculation with Trichoderma harzianum E15 and Suillus luteus N94 significantly ( P < 0.05) promoted the growth of the Pinus sylvestris seedlings. The non-metric multidimensional scaling (NMDS) results indicated a significant difference ( P < 0.05) between the fungal community structures in the rhizosphere soil of the annual and biennial seedlings. In the rhizosphere soil of annual seedlings, the main fungi were Ascomycota, Basidiomycota, Zygomycota. Ascomycota, Basidiomycota, Mortierellomycota, and p-unclassified-k-Fungi were the main fungi in the rhizosphere soil of biennial seedlings. The dominant genus in the rhizosphere soil and a key factor promoting the growth of the annual and the biennial seedlings was Trichoderma , Suillus , respectively. Both of them were negatively correlated with the relative abundance of microbial flora in the symbiotic environment. Trichoderma had a significant promoting effect on the conversion of total phosphorus, total nitrogen, ammonium nitrogen, nitrate nitrogen, and the organic matter in the rhizosphere soil of the seedlings, while Suillus significantly promoted the conversion of organic matter and total phosphorus.

Alternaria porri causa la enfermedad mancha púrpura en cebolla y los hongos benéficos del género Trichoderma pueden ser usados para su biocontrol, pero es limitado el conocimiento de los mecanismos de la respuesta de defensa en la interacción de plantas de cebolla con Trichoderma y A. porri. En este estudio se evalúo la actividad de las enzimas de defensa: glucanasas, quitinasas, catalasas y peroxidasa en plantas de cebolla en la interacción con el aislado To de Trichoderma asperellum y A. porri. El aislado To de T. asperellum se seleccionó porque destacó por su actividad antagónica contra A. porri en comparación con la de otros aislados de T. asperellum (TC1 y TC2) y de T. harzianum y T. atroviridae. Con el método de cultivo dual y papel celofán,el aislado To inhibió el crecimiento micelial de A. porri en 56 y 53%, respectivamente y mostró actividad micoparasítica. La actividad de las enzimas dependió de la interacción de las plantas de cebolla con el aislado To de T. asperellum y A. porri. La actividad de glucanasas y quitinasas aumentó con el aislado de T. asperellum y se reprimió con A. porri. La actividad de catalasas se indujo con A. porri y la actividad de peroxidasas aumentó con ambos microorganismos. En conclusión, los mecanismos de defensa de plantas de cebolla son regulados por la interacción con T. asperellum y A. porri y ambos microorganismos; aspecto a considerar en el biocontrol de patógenos de cebolla con el aislado To de T. asperellum.

Airborne fungal pathogens are known as pathogens and cause number of diseases including infections of skin and severe respiratory tract diseases. The presence of mycotoxins in fungi are found responsible for causing infections and these mycotoxins degrade substances also. Keeping in view of this property, a number of researchers explored different fungal species to synthesize nanoparticles which exhibit promising therapeutic properties. Some of the examples of fungi used for nanoparticles include Aspergillus and Trichoderma. The biosynthesis of fungi based nanoparticles is safe, eco-friendly, biocompatible and low cost. Present review deals with the synthesis of selenium nanoparticles using air borne fungus. Selenium is one of the micronutrient required by plants in trace amounts also has therapeutic properties. But large amount of selenium is toxic and may be hazadorous when enters via food chain. Nanoselenium has similar bioactivity like other forms of selenium in humans and has many biological applications in the field of medical and pharmaceutical research to combat threats to number of diseases and for human health. Biogenic SeNPs have antimicrobial, anticancer (cytotoxic), antioxidant activity. The present review emphasizes on myconanotechnology and its application, synthesis of myconanoparticles. Application of selenium and its therapeutic properties as antimicrobial, anticancer and antiviral, whereas can be used as remedy for number of diseases. Collectively, self-assembly of SeNPs-fungal complexes affects their (patho) biological identity, which may impact human health and ecology.

The hyperdiverse genus Trichoderma is one of most useful groups of microbes for a number of human activities, and their accurate identification is crucial. The structural simplicity and lack of distinctive phenotypic variation in this group enable the use of DNA-based species delimitation methods in combination with phylogenies (and morphology when feasible) to establish well-supported boundaries among species. Our study employed a multilocus phylogeny and four DNA-based methods (automated barcode gap discovery [ABGD], statistical parsimony [SPN], generalized mixed Yule coalescent [GMYC], and Bayesian phylogenetics and phylogeography [BPP]) for four molecular markers (acl1, act, rpb2, and tef1) to delimit species of two lineages of Trichoderma. Although incongruence among these methods was observed in our analyses, the genetic distance (ABGD) and coalescence (BPP) methods and the multilocus phylogeny strongly supported and confirmed recognition of 108 and 39 different species in the Harzianum and Longibrachiatum lineages, including three new species associated with cacao farms in northern Peru, namely, T.awajun, sp. nov., T. jaklitschii, sp. nov., and T. peruvianum, sp. nov. Morphological distinctions between the new species and their close relatives are primarily related to growth rates, colony appearance, and size of phialides and conidia. This study confirmed that an integrative approach (DNA-based methods, multilocus phylogeny, and phenotype) is more likely to reliably verify supported species boundaries in Trichoderma.

The application of Trichoderma spp. has the potential to reduce not only mineral fertilizer use in agriculture but also improve soil health through increased soil biological activity. Trichoderma spp. have shown potential as bio-control agents and plant growth promoting ability, but little attention has been paid to the effect of Trichoderma spp. inoculation on nutrient availability and the soil microbiome. In this study, we evaluated the effect of Trichoderma spp. inoculation on nitrogen mineralization and quantified soil enzymatic activities along with plant growth promotion potential. The influence of Trichoderma spp. and organic amendments on the soil fungal community was also investigated. For this purpose, pots and incubation experiment was carried out, and seven treatments were set as follows; poultry compost (PC), poultry compost + RW309 (PCT), cattle compost (CC), cattle compost + RW309 (CCT), rapeseed oil cake (OC), inorganic fertilizer (N) and only soil (S) were set as control. We evaluated that Trichoderma sp. RW309 produced indole-3-acetic acid, which suggested that it could contribute to plant growth enhancement during early plant growth. Inoculation of RW309 with organic materials stimulated nitrogen mineralization and increased soil phosphatase activity. Furthermore, RW309 altered the fungal community in rhizosphere soil. However, cattle compost was a more suitable culture medium for RW309 than poultry compost in terms of nitrogen mineralization, soil enzyme activity, and growth of RW309. In conclusion, Trichoderma sp. RW309 could be considered for use as a bioorganic fertilizer in combination with organic compost to minimize the use of mineral fertilizers.

Trichoderma is a genus of filamentous fungi that play notable roles in stimulating plant growth after colonizing the root surface. However, the key proteins and molecular mechanisms governing this stimulation have not been completely elucidated. In this study, Trichoderma guizhouense NJAU 4742 was investigated in a hydroponic culture system after interacting with cucumber roots. The total proteins of the fungus were characterized, and the key metabolic pathways along with related genes were analyzed through proteomic and transcriptomic analyses. The roles played by the regulated proteins during the interaction between plants and NJAU 4742 were further examined. The intracellular or extracellular proteins from NJAU 4742 and extracellular proteins from cucumber were quantified, and the high-abundance proteins were determined which were primarily involved in the shikimate pathway (tryptophan, tyrosine, and phenylalanine metabolism, auxin biosynthesis, and secondary metabolite synthesis). Moreover, 15N-KNO3 labeling analysis indicated that NJAU 4742 had a strong ability to convert nitrogenous amino acids, nitrate, nitrile, and amines into ammonia. The auxin synthesis and ammonification metabolism pathways of NJAU 4742 significantly contributed to plant growth. The results of this study demonstrated the crucial metabolic pathways involved in the interactions between Trichoderma spp. and plants. [Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

There are factors contributed to the growth and development of fruit crop seedling. Microbes are well known as plant growth promotors such as symbiotic mycorrhizae and antagonist fungi, Trichoderma spp. The main objective of this experiment is to find out the best medium composition enriched by beneficial microbes to improve papaya seedling growth. The experiment was conducted at Sumani Experimental Station, Indonesian Tropical Fruit Research Institute, Solok, West Sumatera, Indonesia from August until December 2017. The experiment was arranged in a Randomized Complete Block Design with ten treatments and three replicate blocks. The treatments were ten combinations of media for papaya seedling growth enriched by plant growth promotor microbes. In this experiment, medium soil with additional manure, rice husk charcoal and compost (single or combination) combined with mycorrhizae were used. Also, the effect of Trichoderma sp. enrichment into media composition were tested in this experiment. Treatments SCRMc and SCRMcT; with its complexity; were the best media composition to promote papaya seedling growth. These treatments resulted in best performance of plant height, stem diameter and number of leaves of papaya seedlings. The additional of Trichoderma sp. into medium did not show beneficial effect for all parameters in this experiment.

Pestalotiopsis sp. is a mycoparasite of the plant pathogen Aecidium wenshanense. To further understand the mycoparasitism mechanism of Pestalotiopsis sp., we assembled and analyzed its genome. The genome of Pestalotiopsis sp. strain PG52 was assembled into 335 scaffolds and had a size of 58.01 Mb. A total of 20,023 predicted genes and proteins were annotated. This study compared PG52 with the mycoparasites Trichoderma harzianum, Trichoderma atroviride, and Trichoderma virens. This study reveals the entirely different mycoparasitism mechanism of Pestalotiopsis compared to Trichoderma and reveals this mycoparasite’s strong ability to produce secondary metabolites.

Three modes of action of Trichoderma strain are evaluated, with in vitro tests, in order to verify the potential of this antagonistic against Fusarium oxysporum f. sp. lycopersici isolated from tomato plant in Oued Righ region, Algerian southeast. Inhibition rates of Fusarium wilt of the order of 56, 65 and 70% are respectively obtained with antibiosis, competition and mycoparasitism mechanisms. Results, analyzed by ANOVA, are confirmed that the biological agent showed significant fungistatic effect towards Fusarium wilt of tomato most importantly by mycoparasitism that constitutes the most effective mechanism among all the tests applied.

Abstract The fungus Trichoderma arundinaceum exhibits biological control activity against crop diseases caused by other fungi. Two mechanisms that likely contribute to this activity are upregulation of plant defenses and production of two types of antifungal secondary metabolites: the sesquiterpenoid harzianum A (HA) and the polyketide-derived aspinolides. The goal of the current study was to identify aspinolide biosynthetic genes as part of an effort to understand how these metabolites contribute to the biological control activity of T. arundinaceum. Comparative genomics identified two polyketide synthase genes (asp1 and asp2) that occur in T. arundinaceum and Aspergillus ochraceus, which also produces aspinolides. Gene deletion and biochemical analyses in T. arundinaceum indicated that both genes are required for aspinolide production: asp2 for formation of a 10-member lactone ring and asp1 for formation of a butenoyl subsituent at position 8 of the lactone ring. Gene expression and comparative genomics analyses indicated that asp1 and asp2 are located within a gene cluster that occurs in both T. arundinaceum and A. ochraceus. A survey of genome sequences representing 35 phylogenetically diverse Trichoderma species revealed that intact homologs of the cluster occurred in only two other species, which also produced aspinolides. An asp2 mutant inhibited fungal growth more than the wild type, but an asp1 mutant did not, and the greater inhibition by the asp2 mutant coincided with increased HA production. These findings indicate that asp1 and asp2 are aspinolide biosynthetic genes and that loss of either aspinolide or HA production in T. arundinaceum can be accompanied by increased production of the other metabolite(s). Key points • Two polyketide synthase genes are required for aspinolide biosynthesis. • Blocking aspinolide production increases production of the terpenoid harzianum A. • Aspinolides and harzianum A act redundantly in antibiosis of T. arundinaceum.

Total 23 eleven-residue peptaibols, including five reported ones (1-5) in our previous work, were isolated from the fungus Trichoderma longibrachiatum Rifai DMG-3-1-1, which was obtained from the mushroom Clitocybe nebularis (Batsch) P. Kumm. The structures of the 13 new peptaibols (6-10 and 12-19) were determined by their NMR and MALDI-MS/MS data, their absolute structures were further determined by Marfey's analyses and their ECD data. Careful comparison of the structures of 1-23 showed that only seven residues varied including the 2nd (Gln

Tremendous benefits have been derived from the use of fungicides but excessive use of chemical fungicides not only posing threat to human and animal life but also contaminates the prevailing environment. Damage by pathogenic fungi alone causes significant damage to crops like maize, rice, wheat, soybeans, and potatoes. Therefore, it becomes imperative that these diseases are checked and controlled, for which chemical pesticides are being sprayed on plants extensively. Considering the devastating damage and toxicity, the global focus has taken a drift from synthetic chemicals to nature-friendly biological control agents. The present study focuses on the use of biological control agents particularly Trichoderma in sugarcane during Pokkah boeng infection. In the present experiment, twenty promising Trichoderma strains were evaluated for plant growth promotion, lytic enzymes, and physiological and biocontrol activity. Out of the twenty, four potential Trichoderma strains were assessed in the pot experiment viz. T. harzianum strain T28, T41 and T49 and T. aureoviride strain T38. The T. harzianum (T28) showed efficient plant growth-promoting traits as it produced IAA (20.67 µg/ml), phosphorus solubilization (18.57 µg/ml), and cell wall degrading enzymes such as chitinase (24.98 µg/ml) and β-glucanase (29.98 µg/ml). The interference of biocontrol agent T. harzianum (T28) controlled the disease by 73.55%. Apart from this, the inoculation of Trichoderma (T28) enhanced growth attributes including germination percentage (26.61%), mean tiller number (8.28 tiller/pot), individual cane length (241.5 cm), single cane weight (1.13 kg) and the number of milleable canes (6.00 cane/pot). Improvements in physiological activities at different growth stages of the sugarcane crop were observed based on the photosynthetically active radiation (PAR) on the leaf surface, transpiration rate, stomatal conductance, and photosynthetic rate. Further, improvement in juice quality parameters was also observed as it recorded the highest

Solid-state cultivation (SSC) is microbial growth on solid supports under limited water conditions. Citric acid, one of the products obtained by SSC, is a microbial aerobic metabolic product with various industrial applications. Several wastes from agro-industries are used in SSC, such as sugarcane bagasse and vinasse. As xylanolytic enzymes of inoculum breakdown the lignocellulosic material (bagasse), mixed fungal cultures or co-cultures are used in these SSC. Thus, this study aims to evaluate the effect of inoculum (Aspergillus niger and Trichoderma reesei consortium) in the production of citric acid from sugarcane bagasse impregnated with vinasse using bench packed bed reactors (PBR). The results show the importance of T. reesei in inoculum with A. niger at a ratio of 50:50 and 25:75, suggesting the use of solid support due to the complementation of the hydrolytic enzymes. The highest concentration of approximately 1000 mg L− 1 of citric acid yield for 100 mm of bed height in 48 and 72 h, with the maximum yield from glucose to citric acid (2.2 mg citric acid mg glucose−1). kLa indicates that maintaining solid moisture and liquid film thickness is important to keep the oxygen transfer in SSC.

BACKGROUND Proper management of Phytophthora capsici in pepper cultivation is extremely important, since Phytophthora blight is the main disease of this crop worldwide. In the past, the main strategy adopted had been the use of fungicides, causing, in some cases, the development of P. capsici resistant strains. In this work three different treatments selected from previous studies (potassium phosphite, calcium oxide and a water suspension from Trichoderma sp. TW2 enriched compost) were tested to prove their ability to activate the systemic acquired resistance (SAR) in pepper against P. capsici; acibenzolar-s-methyl was used as positive control. Two independent growth chamber pot experiments were performed, spatially dividing the site of treatments application (as radical drench) and the site of inoculation (as agar plug on the third leaf). RESULTS Leaf lesions were measured, showing a significant reduction on all treated plants compared to the untreated control. To further confirm this hypothesis, the expression levels of three SAR key genes (CaPBR1, CaPO1 and CaDEF1) were evaluated though RT-Real Time PCR at the three end-point times: T0, T6 and T24. A significant increase of target genes expression at least in one end-point time in each treated plant was observed. Eventually, statistical overaccumulation of salicylic acid was observed in the upper leaves at the same end-point times, through HPLC-MS/MS analysis. CONCLUSION This work confirmed the hypothesis that the three treatments tested have the ability to prime the plant immune system, leading pepper to an alert status able to confer a better defence against P. capsici. © 2021 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

Fungal protoplast fusion is an approach to introduce novel characteristics into industrially important strains. Cellulases, essential enzymes with a wide range of biotechnological applications, are produced by many species of the filamentous fungi Trichoderma. In this study, a collection of 60 natural isolates were screened for Avicel and carboxymethyl cellulose degradation, and two cellulase producers of Trichoderma virens and Trichoderma harzianum were used for protoplast fusion. One of the resulting hybrids with improved cellulase activity, C1-3, was fused with the hyperproducer Trichoderma reesei Rut-C30. A new selected hybrid, F7, was increased in cellulase activity 1.8 and 5 times in comparison with Rut-C30 and C1-3, respectively. The increases in enzyme activity correlated with an upregulation of the cellulolytic genes cbh1, cbh2, egl3, and bgl1 in the parents. The amount of mRNA of cbh1 and cbh2 in F7 resembled that of Rut-C30 while the bgl1 mRNA level was similar to that of C1-3. AFLP (amplified fragment length polymorphism) fingerprinting and GC–MS (gas chromatography – mass spectrometry) analysis represented variations in parental strains and fusants. In conclusion, the results demonstrate that a 3-interspecific hybrid strain was isolated, with improved characteristics for cellulase degradation and showing genetic polymorphisms and differences in the volatile profile, suggesting reorganizations at the genetic level.

BACKGROUND Trichoderma spp. are soil fungi that interact with plant roots and associated biota such as other microorganisms and soil fauna. However, information about their interactions with root-feeding insects is limited. Here, interactions between Trichoderma harzianum and the root-feeding insect Phyllophaga vetula, a common insect pest in maize agroecosystems, were examined. RESULTS Applications of T. harzianum and P. vetula to the root system increased and decreased maize growth, respectively. Induced tolerance against herbivore attack was provided by T. harzianum maintaining a robust and functional root system as evidenced by the increased uptake of Cu, Ca, Mg, Na and K. Herbivore tolerance also coincided with changes in the emission of root volatile terpenes known to induce indirect defense responses and attract natural enemies of the herbivore. More importantly, T. harzianum induced de novo emission of several sesquiterpenes such as β-caryophyllene and δ-cadinene. In addition, single and combined applications of T. harzianum and P. vetula altered the sucrose content of the roots. Finally, T. harzianum produced 6-pentyl-2H-pyran-2-one (6-PP) a volatile compound that may act as an antifeedant-signaling compound mitigating root herbivory by P. vetula. CONCLUSION Our results provide novel information about belowground multitrophic plant-microbe-arthropod interactions between T. harzianum and P. vetula in the maize rhizosphere resulting in alterations in maize phenotypic plant responses, inducing root herbivore tolerance.

Trichoderma is a genus of soil-borne fungus with an abundance of reports of its economic importance in the agriculture industry. Thus, the correct identification of Trichoderma species is necessary for its commercial purposes. Globally, Trichoderma species are routinely identified from micro-morphological descriptions which can be tedious and prone to errors. Thus, we emphasize that the accurate identification of Trichoderma strains requires a three-pronged approach i.e. based on its morphological characteristics, multilocus gene sequences of the rDNA [internal transcribed spacer (ITS) 1 and 2 regions], translation elongation factor 1-α (TEF-1α), Calmodulin (CAL) and its lignocellulolytic activities. We used this approach to identify a total of 53 Trichoderma strains which were isolated from a wet paddy field located at Tuaran, Sabah, Malaysia. The 53 strains were positively identified as belonging to three Trichoderma species, namely T. asperellum (43 strains), T. harzianum (9 strains), and T. reesei (one strain) on the basis of its morphological characteristics and multilocus gene sequences. Phylogenetic trees constructed based on the UPGMA method of the ITS 1 and 2 regions of the rDNA, TEF-1α and CAL revealed three distinct groups with the T. asperellum, T. harzianum and T. reesei strains placed under the section of Trichoderma, Pachybasium and Longibrachiatum, respectively. In addition, the lignocellulolytic activities of the isolates were measured based on the diameters of the halo zones produced when degrading cellulose, lignin, and starch, respectively. This diagnostic assay can be used to identify Trichoderma as it produces polyphenol oxidase when Tannic Acid Media is used for the lignin test, endoglucanases when Jensen media is used for cellulose, and it hydrolyzes starch to glucose when the modified Melin-Nokrans media is used for the starch test. Accurate identification of Trichoderma species is needed as these strains can potentially be used as a biocontrol agent to prevent diseases and to increase yield in agriculture crops.

The excessive use of chemical fertilizers and pesticides have caused several negative impacts on the environment and human health. They degrade soil fertility, build up resistance on pathogens, inhibit microbial activities and also enhance greenhouse gas emission. It is impossible and inappropriate to control plant pathogens by using chemical pesticides alone. Emphasize should be given towards organic fertilizers and pesticides to attain sustainability in agriculture. The use of Trichoderma is slowly increasing in the recent years among progressive farmers as an alternative to chemical fertilizers and pesticides. Slow rate of multiplication and colonization, susceptible to biotic and abiotic stresses, incomplete elimination of pathogens and high cost are the major problems behind its poor adoption among the farmers. To overcome these challenges different strains of Trichoderma should be identified which can multiply and colonize rapidly, least affected by environmental conditions and having wide host range on pathogens. In addition, farmers should be made aware about the importance of Trichoderma in agriculture through various extension facilities for its wide scale adoption. Trichoderma can be the viable and sustainable alternative which acts as biofertilizer, bioremediator and biocontrol agent. Nevertheless, the use of Trichoderma is limited on research activities and its application at farmers' level is not yet satisfactory. Thus, this study based on critical analysis of the research works from worldwide researchers aims to reveal the present scenario of the use of Trichoderma, its importance, modes of action, methods of application and multiplication, challenges for wide scale adoption and its appropriate solutions.

La muerte descendente del limón ‘Persa’ (Citrus latifolia Tan.) causada por Lasiodiplodia spp., es una enfermedad de alta importancia. La intensidad de las podas en limón incrementa la susceptibilidad y la pérdida anual de hasta 35% de árboles, lo que resulta 60% de reducción de la producción. Durante los años 2016 y 2017, en el municipio de Papantla, Veracruz se evaluó la efectividad del control químico y biológico contra Lasiodiplodia spp., después de la poda. Se realizó un diseño de bloques completo al azar, se aplicaron cinco tratamientos: metil tiofanato (1 g L-1), tiabendazole (2.5 g L-1), clorotalonil (3 g L-1) y mancozeb (4 g L-1), Trichoderma harzianum + Trichoderma viridae (20 ml L-1) y un testigo (sin aplicación). Se realizaron dos aspersiones dirigidas a tronco, ramas y follaje hasta punto de goteo. Se evalúo la incidencia y severidad de la enfermedad cada siete días después de la primera aplicación. Con los datos de incidencia se realizó ajuste de modelos epidemiológicos y se calcularon los parámetros descriptivos como: intensidad inicial, tasa de incremento y área bajo la curva del progreso de la enfermedad. El fungicida metil tiofanato tuvo mayor efectividad para el control de la enfermedad, seguido de tiabendazol.

Fungi are considered to be the most resilient and economically important microbial community that can easily survive and optimally grow under a wide range of growth conditions. Thermophilic fungi from the geothermal sources have been less pondered upon and lie unexplored. Here, a microbiome approach was conducted to understand the concealed world of the environmental mycobiota from the two hot springs of North Sikkim district located in North-east India. The solfataric muds from the hot springs were analyzed. In both the samples, on the basis of genus level classification, genus Fusarium had the highest abundance followed by Colletotrichum, Pochonia, Pyricularia, Neurospora, etc. Analyzing the predicted genes, the functional proteins of New Yume Samdung mycobiome were found to be dominated by the genera Fusarium (22%), Trichoderma (12%), and Aspergillus (11%), whereas in the case of Old Yume Samdung, it was dominated by the genera Aspergillus (11%), Saccharomyces (6%), and Fusarium (5%). Interestingly, in the studied mycobiome, environmental yeasts were also detected. From the functional metagenomics, sulfate adenylatetransferase (SAT) proteins for sulfur assimilation were found in some of the fungal reads. Toxin protein reads such as AM-toxin biosynthesis proteins, AF-toxin biosynthesis proteins, Gliotoxin biosynthesis proteins, and aflatoxin biosynthesis proteins were detected in the mycobiomes.

Harnessing the benefits of plant–microbe interactions towards better nutrient mobilization and plant growth is an important challenge for agriculturists globally. In our investigation, the focus was towards analyzing the soil–plant–environment interactions of cyanobacteria-based formulations (Anabaena–Nostoc consortium, BF1–4 and Anabaena–Trichoderma biofilm, An–Tr) as inoculants for ten maize genotypes (V1–V10). Field experimentation using seeds treated with the formulations illustrated a significant increase of 1.3- to 3.8-fold in C–N mobilizing enzyme activities in plants, along with more than five- to six-fold higher values of nitrogen fixation in rhizosphere soil samples. An increase of 22–30% in soil available nitrogen was also observed at flag leaf stage, and 13–16% higher values were also recorded in terms of cob yield of V6 with An-Tr biofilm inoculation. Savings of 30 kg N ha−1 season−1 was indicative of the reduced environmental pollution, due to the use of microbial options. The use of cyanobacterial formulations also enhanced the economic, environmental and energy use efficiency. This was reflected as 37–41% reduced costs lowered GHG emission by 58–68 CO2 equivalents and input energy requirement by 3651–4296 MJ, over the uninoculated control, on hectare basis. This investigation highlights the superior performance of these formulations, not only in terms of efficient C–N mobilization in maize, but also making maize cultivation a more profitable enterprise. Such interactions can be explored as resource-conserving options, for future evaluation across ecologies and locations, particularly in the global climate change scenario.

Salvia multicaulis has been an important medicinal plant in Iran and several East Asian countries for hundreds of years. Because of growing demand, overharvesting of wild S. multicaulis has endangered its wild populations. Endophytes are well known for protecting wild plant populations against biotic and abiotic stresses, especially under harsh situations, as well as for their plant growth enhancement activities. Since no information was on endophyte biology in S. multicaulis, here we aimed at analyzing diversity and spatiotemporal distribution of fungal endophytes associating S. multicaulis in their main wild habitats in Iran, i.e., Qazvin, Alborz and Mazandaran provinces. A total of 153 fungal endophytes were isolated and identified according to their morphology and ribosomal ITS rDNA sequences. As results indicated Ascomycota dominated in colonizing S. multicaulis with a relative frequency (RF) of 96.77%, comprising of Eurotiomycetes (RF: 40.5%), Sordariomycetes (RF: 33.9%) and Dothideomycetes (RF: 20.5%). Mucoromycota, comprised the rest of endophytes (RF: 5.23%). The entire fungal microbiome was classified into nine genera including Fusarium (25.5%), Penicillium (21.5%), Aspergillus (17.0%), Alternaria (15.5%), Colletotrichum (5.2%), Rhizopus (5.2%), Macrophomina (4.5%), Trichoderma (3.25%) and Nodulisporium (2.0%). Analyses of different diversity indices indicated significant correlations with tissue type, sampling locations and season of recovery. Almost 43% of fungal endophytes were recovered at Mazandaran, Kojur; 35.4% at Qazvin, Barajin Forest Park; 30.1% at Alborz, Taleqan; and 21% at Alborz, Mahdasht. The highest overall endophyte recovery was in summer (36.8%), followed by spring (31.6%), autumn (21%), and winter (10.5%). In total, the number of endophytes recovered from roots (91) was higher than those of stems (32) and leaves (30), especially during autumn and winter. Accordingly, we conclude that Ascomycota are the major endophytic fungi colonizing S. multicaulis, and that sampling location, tissue type and season can affect the fungal endophyte composition of this medicinal plant. This knowledge could be further applied in protection and health management of this endangered species.

The present investigation was carried out to evaluate the shelf life in T. asperellum tablets and capsules. Four types of tablets viz. T1 (T. asperellum talc tablet), T2 (T. asperellum charcoal tablet), T3 (T. asperellum lignite tablet), T4 (T. asperellum flyash tablet) and Six types of capsules viz. T5 (T. asperellum talc capsule), T6 (T. asperellum gelatin capsule), T7 (T. asperellum alginate capsule), T8 (T. asperellum alginate + charcoal capsule), T9 (T. asperellum gelatin + flyash capsule), T10 (T. asperellum Frozen culture mass along with disc capsule) were prepared and compaired with sorghum grains based carrier as control T11. Then observe the shelf life upto 180 days from the date of manufacturing at regular interval of 30 days. The study revealed that the desired minimum count i.e. 1 x 107 was noticed in all the formulations upto 180 days storage. Maximum cfu/g (76.33 x 107) was obtained inT10 i.e. frozen culture mass along with medium disc capsule followed by T4, T. asperellum fly ash tablet (39 × 107cfu/g). However, least cfu/g recorded in T9 T. asperellum alginate + charcoal capsules (20 × 107cfu/g). In the present study tablet and capsule delivery system of various formulations was also tried by using jaggery treatment and maximum population of T. asperellum obtained (77.66 × 107cfu/ml) in T10,T. asperellum Frozen culture mass along with medium disc capsule followed by (53 × 107cfu/ml) in T7, T. asperellum alginate capsule.

Eleven formulations of Trichoderma asperellum were evaluated in present investigation, among these four types of tablets formulation viz. talc tablets, charcoal tablets, lignite tablets, fly ash tablets, six capsules formulations viz. talc capsule, alginate capsules, gelatin capsules, alginate + charcoal capsules, gelatin + fly ash capsules and T. asperellum frozen culture mass along with medium disc capsules and one sorghum grains formulation as a control were used and observation on shelf life up to 270 days from date of manufacturing at regular intervals of 30 days were taken. Maximum cfu/g (42.00 x 107) was obtained in Trichoderma treatment frozen culture mass along with medium disc capsule and least cfu/g was recorded in T. asperellum lignite tablet (11.33 × 107 cfu/g) upto 270 days of storage. In the present study tablet and capsule delivery system of various formulations was tried by using jaggery treatment. Maximum population of T. asperellum obtained (45.00 × 107 cfu/ml) in T. asperellum frozen culture mass along with medium disc capsule and minimum were obtained in T. asperellum lignite tablets, (8.33 × 107cfu/ml).