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Bacterial leaf blight (BLB) and blast are among the most destructive diseases of rice. In order to develop new varieties that can resist various races of the pathogens Xanthomonas oryzae pv. oryzae (Xoo) and Magnaporthe oryzae, which cause these two diseases, respectively, it is important to identify suitable markers and a marker-aided selection strategy. Seventeen foreground microsatellites associated with resistance against BLB and blast were screened for polymorphism for possible adoption in a breeding program for resistant cultivar development. A total of 472 background simple sequence repeats (SSRs) were also screened for polymorphism in order to recover the recurrent parent genome. All 72 F1 progenies were also analysed with the 17 foreground and 472 background markers in comparison to the alleles of their parents. The markers were validated using 218 BC2F2 plants. The result revealed six tightly linked polymorphic foreground markers (Xa21FR, pTA248, Xa13prom, MP, RM21 and RM13) associated with resistance against Xoo pathotype P7.7 and two microsatellites (RM6836 and RM8225) associated with resistance against blast pathotype P7.2. A total of 79 polymorphic background markers were identified for recovering the recurrent parent genome. The result also showed that the markers had goodness of fit (blast resistance) to 1:2:1 ratio for single gene model in BC2F2 progenies. These genetically confirmed microsatellite markers were recommended for use in marker-assisted backcross breeding and other marker-assisted selection of BLB and blast resistance genes in order to develop varieties with durable and broad spectrum resistance against the two major rice diseases.

Eggplant is an essential vegetable crop that is rich in health-related compounds, and the content of these compounds can be increased through grafting. It was reported that grafting with vigorous wild relatives’ rootstocks can improve eggplant’s fruit quality. The study was conducted to investigate the fruit yield, composition and physicochemical traits of Solanum melongena ME, CE, NE and TE scions grafted on wild relatives’ rootstocks of ST, SM and SI. The results show that a notable graft success (100%) was recorded in grafted (TE/ST) and self-grafted (TE/TE) plants using the cleft technique. Growth and yield traits indicated that CE and TE scions grafted onto ST, SM and SI showed better performance in all of the traits mentioned above in an open field across two years, except first flower formation which was displayed on non-grafted CE. In all the rootstocks studied—ST, SM and SI—there was no noticeable effect on carbohydrate, fibre, ash, pH and dry matter content. There was a notable effect of grafting ME/ST, CE/ST, ME/SM, CE/SI, ME/SI, ME/SI and NE/SM on the fruit length, fruit width, total soluble solids, fruit firmness and fat and protein content, respectively. Furthermore, antioxidants such as DPPH (ME/SM), total flavonoids (NE/SM) and total phenolics (TE/SI) had remarkable content of the above-mentioned physicochemical properties. Results show that ST, SM and SI represent a viable rootstock alternative to Solanum melongena or Solanum lycopersicum production.

Rice ( Oryza sativa L) is an important cereal crop and staple food crop of the world, whose yield could be influenced by biotic and abiotic conditions, resulting in 1-100% yield losses depending on the incidences of diseases or severity of stress condition. The research was basically to identify the polymorphic markers at the target region (parental survey) and screened for selection of improved lines with multiple traits of resistance/tolerance to two or three of blast, bacterial leaf blight and drought tolerance. Three varieties were used; two high yielding varieties of Putra-1 and MR219-PL-137 resistant to blast and tolerant to drought respectively, and an IRBB60 bacterial leaf blight resistance variety. They were crossed to a common recipient parent (Putra-1) to produce two categories of F 1 hybrid as baseline for development of improved lines in three crossing methods which produced five populations (PB, PD, PBD, PDB, DPB) through marker-assisted pedigree selection. The populations were screened by genotyping using SSR markers to select lines polymorphic to parental cultivars and carrying the linked markers/QTLs for diseases resistance and drought tolerance: Blast resistance (RM6836 and RM8225), IRBB60 (RM224, RG136, RM122, RM21), MR219-PL-137 drought tolerance QTLs (RM236, RM520, RM511, RM1261). The results of gel electrophoresis agreed with the phenotyping results of the improved lines F 4 , F 3 (2), F 3 for single, double and three-way (and reciprocal) crosses respectively and also susceptible parent cultivars.

Flooding or submergence is one of the major environmental stressors affecting many man-made and natural ecosystems worldwide. The increase in the frequency and duration of heavy rainfall due to climate change has negatively affected plant growth and development, which eventually causes the death of plants if it persists for days. Most crops, especially rice, being a semi-aquatic plant, are greatly affected by flooding, leading to yield losses each year. Genetic variability in the plant response to flooding includes the quiescence scheme, which allows underwater endurance of a prolonged period, escape strategy through stem elongation, and alterations in plant architecture and metabolism. Investigating the mechanism for flooding survival in wild species and modern rice has yielded significant insight into developmental, physiological, and molecular strategies for submergence and waterlogging survival. Significant progress in the breeding of submergence tolerant rice varieties has been made during the last decade following the successful identification and mapping of a quantitative trait locus for submergence tolerance, designated as SUBMERGENCE 1 (SUB1) from the FR13A landrace. Using marker-assisted backcrossing, the SUB1 QTL (quantitative trait locus) has been incorporated into many elite varieties within a short time and with high precision as compared with conventional breeding methods. Despite the advancement in submergence tolerance, for future studies, there is a need for practical approaches exploring genome-wide association studies (GWA) and QTL in combination with specific tolerance traits, such as drought, salinity, disease and insect resistance.

Drought is the leading threat to agricultural food production, especially in the cultivation of rice, a semi-aquatic plant. Drought tolerance is a complex quantitative trait with a complicated phenotype that affects different developmental stages in plants. The level of susceptibility or tolerance of rice to several drought conditions is coordinated by the action of different drought-responsive genes in relation with other stress components which stimulate signal transduction pathways. Interdisciplinary researchers have broken the complex mechanism of plant tolerance using various methods such as genetic engineering or marker-assisted selection to develop a new cultivar with improved drought resistance. The main objectives of this review were to highlight the current method of developing a durable drought-resistant rice variety through conventional breeding and the use of biotechnological tools and to comprehensively review the available information on drought-resistant genes, QTL analysis, gene transformation and marker-assisted selection. The response, indicators, causes, and adaptation processes to the drought stress were discussed in the review. Overall, this review provides a systemic glimpse of breeding methods from conventional to the latest innovation in molecular development of drought-tolerant rice variety. This information could serve as guidance for researchers and rice breeders.