6 results on '"DUMAS, Francesca"'
Search Results
2. Chromosomal Localization of 18S-28S rDNA and(TTAGGG)n Sequences in Two South African Dormice of the Genus Graphiurus (Rodentia: Gliridae).
- Author
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Milioto, Vanessa, Vlah, Sara, Mazzoleni, Sofia, Rovatsos, Michail, and Dumas, Francesca
- Subjects
KARYOTYPES ,RECOMBINANT DNA ,FLUORESCENCE in situ hybridization ,RODENTS ,SOUTH Africans - Abstract
Classical cytogenetics and mapping of 18S-28S rDNA and (TTAGGG)
n sequences by fluorescence in situ hybridization (FISH) was performed on Graphiurus platyops (GPL) and Graphiurus ocularis (GOC) metaphases with the aim to characterize the genomes. In both species, inverted DAPI karyotypes showed the same diploid number, 2n = 46, and hybridization of the (TTAGGG)n probe revealed interstitial telomeric sequences (ITSs) at the centromeres of almost all bi-armed chromosomes. FISH with the rDNA probe localized nucleolus organizer regions (NORs), at the terminal ends of the p arms of the subtelocentric pairs 16 and 17 in both species and detected additional signals on GPL8 and GOC18, 19, and 22. The species have similar karyotypes, but their chromosome pairs 18-22 differ in morphology; these are acrocentric in G. platyops, as also confirmed by C-banding, and subtelocentric in G. ocularis. These differences in pairs 18-22 were also highlighted by hybridization of the telomeric probe (TTAGGG)n , which showed the small p arms in G. ocularis enriched with ITSs. FISH of rDNA probes detected multiple NOR loci in G. ocularis, underlining the intense evolutionary dynamics related to these genes. Although the Graphiurus species analyzed have similar karyotypes, the results on the repetitive sequences indicate a complex pattern of genomic reorganization and evolution occurring in these phylogenetically close species. [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
- View/download PDF
3. Evolutionary insight on localization of 18S, 28S rDNA genes on homologous chromosomes in Primates genomes.
- Author
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Mazzoleni, Sofia, Rovatsos, Michail, Schillaci, Odessa, and Dumas, Francesca
- Subjects
PRIMATES ,GENOMES ,EVOLUTIONARY theories ,KARYOTYPES ,CHROMOSOMES - Abstract
We explored the topology of 18S and 28S rDNA units by fluorescence in situ hybridization (FISH) in the karyotypes of thirteen species representatives from major groups of Primates and Tupaia minor (Günther, 1876) (Scandentia), in order to expand our knowledge of Primate genome reshuffling and to identify the possible dispersion mechanisms of rDNA sequences. We documented that rDNA probe signals were identified on one to six pairs of chromosomes, both acrocentric and metacentric ones. In addition, we examined the potential homology of chromosomes bearing rDNA genes across different species and in a wide phylogenetic perspective, based on the DAPI-inverted pattern and their synteny to human. Our analysis revealed an extensive variability in the topology of the rDNA signals across studied species. In some cases, closely related species show signals on homologous chromosomes, thus representing synapomorphies, while in other cases, signal was detected on distinct chromosomes, leading to species specific patterns. These results led us to support the hypothesis that different mechanisms are responsible for the distribution of the ribosomal DNA cluster in Primates. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
4. Repetitive Sequence Distribution on Saguinus , Leontocebus and Leontopithecus Tamarins (Platyrrhine, Primates) by Mapping Telomeric (TTAGGG) Motifs and rDNA Loci.
- Author
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Ceraulo, Simona, Perelman, Polina L., Mazzoleni, Sofia, Rovatsos, Michail, and Dumas, Francesca
- Subjects
RIBOSOMAL DNA ,LOCUS (Genetics) ,RECOMBINANT DNA ,FLUORESCENCE in situ hybridization ,CHROMOSOMAL rearrangement ,CYTOGENETICS - Abstract
Simple Summary: Telomeric and rDNA sequence distribution on tamarins (New world monkeys, Primates) was analysed through molecular cytogenetics by fluorescence in situ hybridization. The mapping of Telomeric and rDNA probes on chromosomes was performed in order to clarify their localization and role in genome evolution. We found rDNA loci on the same homologs 19–22 on the analysed species with a different position in one of them named Leontopithecus rosalia, presumably as result of inversions. Other rDNA signals could be present on chromosome 16 and 17. On the last species, we found the classic telomeric sequence with exceptions while on the other species analysed, we found very amplified telomeric signals at the edge of chromosomes and some centromeric signals as exceptions, especially on chromosome pairs 16 and 17 as result of inversions of telomeric sequences or the presence of new acquired rDNA loci above them. The results obtained enable us to underline that the different chromosomal morphology between the species analysed could be due to inversions which dislocate the rDNA loci, the presence of new rDNA loci or the amplification of telomeric sequences. A comparative perspective with other data results obtained could be useful in order to better understand genome evolution. Tamarins are a distinct group of small sized New World monkeys with complex phylogenetic relationships and poorly studied cytogenetic traits. In this study, we applied molecular cytogenetic analyses by fluorescence in situ hybridization with probes specific for telomeric sequences and ribosomal DNA loci after DAPI/CMA3 staining on metaphases from five tamarin species, namely Leontocebus fuscicollis, Leontopithecus rosalia, Saguinus geoffroyi, Saguinus mystax and Saguinus oedipus, with the aim to investigate the distribution of repetitive sequences and their possible role in genome evolution. Our analyses revealed that all five examined species show similar karyotypes, 2n = 46, which differ mainly in the morphology of chromosome pairs 16–17 and 19–22, due to the diverse distribution of rDNA loci, the amplification of telomeric-like sequences, the presence of heterochromatic blocks and/or putative chromosomal rearrangements, such as inversions. The differences in cytogenetic traits between species of tamarins are discussed in a comparative phylogenetic framework, and in addition to data from previous studies, we underline synapomorphies and apomorphisms that appeared during the diversification of this group of New World monkeys. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
5. Molecular Cytogenetic Characterization of the Sicilian Endemic Pond Turtle Emys trinacris and the Yellow-Bellied Slider Trachemys scripta scripta (Testudines, Emydidae).
- Author
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Scardino, Rita, Mazzoleni, Sofia, Rovatsos, Michail, Vecchioni, Luca, and Dumas, Francesca
- Subjects
EMYDIDAE ,TURTLES ,LOGGERHEAD turtle ,FLUORESCENCE in situ hybridization ,CHROMOSOMAL rearrangement ,KARYOTYPES - Abstract
Turtles, a speciose group consisting of more than 300 species, demonstrate karyotypes with diploid chromosome numbers ranging from 2n = 26 to 2n = 68. However, cytogenetic analyses have been conducted only to 1/3rd of the turtle species, often limited to conventional staining methods. In order to expand our knowledge of the karyotype evolution in turtles, we examined the topology of the (TTAGGG)
n telomeric repeats and the rDNA loci by fluorescence in situ hybridization (FISH) on the karyotypes of two emydids: the Sicilian pond turtle, Emys trinacris, and the yellow-bellied slider, Trachemys scripta scripta (family Emydidae). Furthermore, AT-rich and GC-rich chromosome regions were detected by DAPI and CMA3 stains, respectively. The cytogenetic analysis revealed that telomeric sequences are restricted to the terminal ends of all chromosomes and the rDNA loci are localized in one pair of microchromosomes in both species. The karyotype of the Sicilian endemic E. trinacris with diploid number 2n = 50, consisting of 13 pairs of macrochromosomes and 12 pairs of microchromosomes, is presented here for first time. Our comparative examination revealed similar cytogenetic features in Emys trinacris and the closely related E. orbicularis, as well as to other previously studied emydid species, demonstrating a low rate of karyotype evolution, as chromosomal rearrangements are rather infrequent in this group of turtles. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
6. Evolutionary insight on localization of 18S, 28S rDNA genes on homologous chromosomes in Primates genomes
- Author
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Odessa Schillaci, Francesca Dumas, Michail Rovatsos, Sofia Mazzoleni, Mazzoleni, Sofia, Rovatsos, Michail, Schillaci, Odessa, and Dumas, Francesca
- Subjects
0301 basic medicine ,Primates ,lcsh:QH426-470 ,Plant Science ,Repetitive DNA ,Biology ,Settore BIO/08 - Antropologia ,synapomorphy ,Genome ,Homology (biology) ,03 medical and health sciences ,medicine ,Genetics ,Animalia ,Chordata ,Ribosomal DNA ,Synteny ,Phylogenetic tree ,medicine.diagnostic_test ,Primate ,Fluorescence in situ hybridization ,Karyotype ,Scandentia ,lcsh:Genetics ,030104 developmental biology ,Evolutionary biology ,Mammalia ,Animal Science and Zoology ,repetitive DNAs ,tree shrew ,Biotechnology ,Research Article - Abstract
We explored the topology of 18S and 28S rDNA units by fluorescence in situ hybridization (FISH) in the karyotypes of thirteen species representatives from major groups of Primates and Tupaia minor (Günther, 1876) (Scandentia), in order to expand our knowledge of Primate genome reshuffling and to identify the possible dispersion mechanisms of rDNA sequences. We documented that rDNA probe signals were identified on one to six pairs of chromosomes, both acrocentric and metacentric ones. In addition, we examined the potential homology of chromosomes bearing rDNA genes across different species and in a wide phylogenetic perspective, based on the DAPI-inverted pattern and their synteny to human. Our analysis revealed an extensive variability in the topology of the rDNA signals across studied species. In some cases, closely related species show signals on homologous chromosomes, thus representing synapomorphies, while in other cases, signal was detected on distinct chromosomes, leading to species specific patterns. These results led us to support the hypothesis that different mechanisms are responsible for the distribution of the ribosomal DNA cluster in Primates.
- Published
- 2018
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