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Simple Summary: This is the first study to investigate the spatial distribution and population structure of the tub gurnard (Chelidonichthys lucerna) in different regions of the northeast Atlantic. To analyze fish body shape, a morphometry-based method, which helps identify variations in fish body shape that may exist due to genetic factors or environmental adaptability, was used. This study relied on C. lucerna individuals captured in the following three fishing areas: Conwy Bay (United Kingdom), Biscay Bay (Spain) and Matosinhos (Portugal). The findings indicate the existence of significant regional differences in fish bodies, thus highlighting the existence of distinct fish populations in the three regions. Results also suggest that the Spanish and British populations may inhabit similar habitats, as some similarities in body shape were found. To confirm these findings, we recommend future research using a holistic approach with alternative and complimentary stock assessment tools. The study of geometric morphometrics among stocks has proven to be a valuable tool in delineating fish spatial distributions and discriminating distinct population units. Variations in fish body morphology can be linked to genetic factors or to phenotypic adaptability in response to environmental variables. The tub gurnard (Chelidonichthys lucerna) is a demersal species that usually lives in the bottom of the continental shelf, being widely distributed along the northeast Atlantic, Mediterranean and Black seas. Worldwide interest in the species has increased since 2006, when ICES recognized its potential for commercial exploitation. However, despite its broad geographic occurrence, to date, research on C. lucerna population structure at large spatial scales is still lacking. In this paper, body geometric morphometrics, using a landmark-based truss network, was applied in order to discriminate C. lucerna populations caught in three different fishery grounds areas along the northeast Atlantic: Conwy Bay (United Kingdom), Biscay Bay (Spain) and Matosinhos (Portugal). The results obtained in this study revealed a high overall relocation success (95%) of samples to their original locations, thus demonstrating the existence of significant regional differences and indicating that we are dealing with different fish population units. Moreover, the data revealed a partial overlap between individuals from Spain and United Kingdom, suggesting that in geographically distant areas these populations may inhabit similar environments. However, to corroborate these findings, future works using a holistic approach with alternative and complimentary stock assessment tools (e.g., genetic and phenotypic natural tags) are highly recommended. [ABSTRACT FROM AUTHOR]

Otolith is important for studying fish populations and life histories. In this study, the dominant species of Schizothorax grahami in the source section of the Chishui River was taken to understand the relationships between otolith morphology and total length (TL). Results showed a large difference between the four TL groups (A/B/C/D), except group B is similar to group C. The combined discrimination success rate of linear discriminant analysis was 62.2%. Group A and D's success rate is the highest, at around 75%. Meanwhile, the success rate for Group B and Group C is below 65%. The one-way ANOVA of the Shape Index and the Canonical analysis of Principal Coordinates with two coefficients (Fourier coefficients and Wavelet coefficients) showed that Group B is similar to Group C, with a large difference from the other two groups. When TL was greater than 100 mm (the pearl organs appearing), the otolith growth was lower changing. Otolith morphology still changes with growth after sexual maturity in fish, so the larger fish is more useful for conducting otolith morphology studies for accurate evaluation and management of local fishery resources. [ABSTRACT FROM AUTHOR]

Fish morphology is incredibly plastic and local/resident morphology can be influenced by factors including habitat, predation, resource availability, and water velocity. Through analysis of body shape using geometric morphometrics, we describe the degree of phenotypic plasticity within a generalist fish species resident to low‐order tributaries of Green Bay and Lake Michigan. We predicted that isolated populations of creek chub (Semotilus atromaculatus) would display plastic responses in body shape due to differences in selective pressures imposed by stream environments. We show that body shape of creek chub was significantly different between streams which are considered to be isolated populations, and while we expected body shape variation to remain constant between study years, we found that shape was not fixed and changed over time in the same manner among focal streams. The diversity of creek chub diet and degree of agricultural land use in the watershed were significant predictors of body morphology. The effect of resource availability and land use within the watershed demonstrates how selective pressures influence phenotypes at the population level. Our study provides insight into morphological changes of stream fish populations, which may be important in the context of changing ecosystems and novel conditions. [ABSTRACT FROM AUTHOR]

This study investigated the reproductive traits of the hermaphroditic four-finger threadfin, Eleutheronema tetradactylum, along the coasts of Thailand during January to December 2021. Fish samples were collected from Pattani Bay, Thailand to assess the sex ratio, gonadosomatic index (GSI), maturity stage and fecundity. Additional fish samples were also collected from other areas to evaluate the length and weight at first sex change (Ls50 and Ws50) and length at first maturity (Lm50). The overall sex ratio for male and female was 1:0.69 with male being predominant throughout the year. Threadfin fish spawn the whole year round with peaks during moderate rainy and heavy rainy seasons. Histological examination confirmed its protandrous hermaphrodite posing multiple spawning habits. The average fecundity was 1.85 × 105 ± 1.05 × 105 eggs and positively related with standard length, body weight, gonad weight, and egg diameter (p < 0.05). The Ls50 and Ws50 were 27.58 cm and 419.39 g, and 29.71 cm and 457.28 g, for fish from Pattani Bay and Samut Prakan province, respectively. The Lm50 of male from Pattani Bay and Samut Prakan province were 25.78 cm and 25.56 cm, respectively, which were larger than those from Satun and Nakhon Sri Thammarat provinces. The Lm50 of females from Pattani Bay was smaller than that from Samut Prakan province. This study provided fundamental information on the reproductive characteristics of E. tetradactylum, which can be implemented to support management of natural fish stock and aquaculture development. [ABSTRACT FROM AUTHOR]

Elevated concentrations of nitrite are toxic to fish and can cause a myriad of well documented issues. However, the effects of sublethal concentrations of nitrite on fish health, and specifically, fish tissue microbiomes have not been studied. To test the effects of nitrite exposure, goldfish were exposed to sublethal concentrations of nitrite, 0.0 mM, 0.1 mM, and 1.0 mM, for 2 months. The bacteria in the nose, skin, gills, and water were then extracted and sequenced to identify changes to the microbial composition. The water microbiome was not significantly changed by the added nitrite; however, each of the tissue microbiomes was changed by at least one of the treatments. The skin and gill microbiomes were significantly different between the control and 1.0 mM treatment and the nose microbiome showed significant changes between the control and both the 0.1 mM and 1.0 mM treatments. Thus, sublethal concentrations of nitrite in the environment caused a shift in the fish tissue microbiomes independently of the water microbiome. These changes could lead to an increased chance of infection, disrupt organ systems, and raise the mortality rate of fish. In systems with high nitrite concentrations, like intensive aquaculture setups or polluted areas, the effects of nitrite on the microbiomes could negatively affect fish populations. [ABSTRACT FROM AUTHOR]

This study evaluated the status of the well-being of wild Nandus nandus in the Kawadighi Haor through morphometric and gastrointestinal indices and local people's perceptions. Basic macroscopic morphology of the gastrointestinal tract (GIT), the viscera somatic index (VSI), the hepatosomatic index (HSI), the condition factor (K), length–weight relationships, and gut histology were analyzed from the regular commercial catch. The GIT morphology includes a tube-like esophagus, a tapering stomach, a tubular intestinal region, and a rectum, all of which have clinically normal shapes and conditions. VSI and HSI values fluctuate throughout the year, indicating the periodic variation of food content and availability in the ecosystem. The condition factor (K) was generally stable, with minor deviations in December. The mucosa, submucosa, muscularis, and serosa were identified from the stomach of N. nandus and showed normal histological characteristics. There were numerous proliferated villi in the tunica mucosa, but no histopathological abnormalities were found in the gut. These findings suggest that the current population of N. nandus in the Haor is in a favorable condition. However, local people reported some potential threats that might be a concern for the long-term survival of this species. The results of the present study will be useful for effective and sustainable stock management of the N. nandus fishery in the Kawadighi Haor and other floodplain ecosystems. [ABSTRACT FROM AUTHOR]

The biological meaning of the parameters a and b of the empirical and in fisheries science and management omnipresent relationship Weight = a * Length b is still unclear; the depicting body size trajectory has been associated thus far with body form and with food/energy considerations. When I analyzed a 116 species large and 36 years long subset of the port biosampling program of the US Virgin Islands fishery, Eastern Caribbean, using regression prediction intervals and fish life traits, I found out that the power law model is not a perfect fit due to individual variation. Concurrent stunting and starvation are generated at marginal values of the a and b parameters; their frequency is independent of fish body form and habitat type; dependent on species, trophic level and life stage; and changes the fundamental fish body size growth model from (log transformed) linear to curvilinear for three demo species. Also, variation in the parameter b could not be explained by trophic level, body form or habitat type. An alternative explanation is proposed, where b is the "accelerator" and a is the "break"; it expresses the correspondence of fish condition to environmental condition. [ABSTRACT FROM AUTHOR]

To explore the external morphological differences of golden pompano in different geographical populations, eight quantitative traits of 210 samples from seven golden pompano populations were measured. Multivariate statistical methods, such as principal component analysis, discriminant analysis, cluster analysis, and One-way ANOVA, were used to compare morphological differences among the populations. Principal component analysis extracted the top five principal components with a cumulative contribution rate of 85.79%, of which the first three principal components could explain seven morphological features. The principal component scatter plot showed that the NH, CH, and LL populations had similar morphology. Using the stepwise discriminant method to establish the classification and discrimination functions of the seven populations, the discrimination accuracy of the DL population was 93.3% for P1 and 87.5% for P2, which was the highest, and the comprehensive discrimination rate was 71.4%. The clustering relationship diagram showed that the populations were divided into three branches, and the CH and NH populations were closest. In contrast, the DL and HF populations were farthest from the other populations. One-way ANOVA showed significant differences (P<0.05) among all traits of the populations, and the morphological differences between the HX and DL populations were the largest. The results of this study showed specific differences in the external morphology of golden pompano among different populations. [ABSTRACT FROM AUTHOR]

The study vigilantly considered the load of Pb, Cd, Cr, Cu, and Zn in a variety of tissues (muscle, gills, and liver) of 5 fish species (Mystus gulio, Notopterus notopterus, Notopterus chitala, Mugil cephalus, and Glossogobius giuris) collected from six sites in the lower Gangetic area. The study showed the lowest concentration of metals in the muscles. The accumulated patterns of heavy metals differed in different regions and concentrations fluctuated between the liver and gills. The target hazard quotient (THQ) value has been measured in contaminated fish. The THQ values for all the metals in respective fishes are below 1 that indicate that indirect intake of metals by consuming these selected fishes will not result in potential health hazard in human. The estimated daily intake (EDI) results were also calculated. EDI levels of all elements are lower than the permissible limit indicating a lower chance for health risk to occur. However, doses below the recommended levels do not indicate that they are completely safe for consumption or those above are not to be used. Thus, it can be demonstrated that occurrence of Cd, Cr, Pb, Cu, and Zn in the preferred tissues of the selected fish species in the present study may not pretense severe human health risk after consumption at its existing concentration. [ABSTRACT FROM AUTHOR]

Commercial fishery harvest can influence the evolution of wild fish populations. Our knowledge of selection on morphology is however limited, with most previous studies focusing on body size, age, and maturation. Within species, variation in morphology can influence locomotor ability, possibly making some individuals more vulnerable to capture by fishing gears. Additionally, selection on morphology has the potential to influence other foraging, behavioral, and life‐history related traits. Here we carried out simulated fishing using two types of gears: a trawl (an active gear) and a trap (a passive gear), to assess morphological trait‐based selection in relation to capture vulnerability. Using geometric morphometrics, we assessed differences in shape between high and low vulnerability fish, showing that high vulnerability individuals display shallower body shapes regardless of gear type. For trawling, low vulnerability fish displayed morphological characteristics that may be associated with higher burst‐swimming, including a larger caudal region and narrower head, similar to evolutionary responses seen in fish populations responding to natural predation. Taken together, these results suggest that divergent selection can lead to phenotypic differences in harvested fish populations. [ABSTRACT FROM AUTHOR]

Morphological characteristics such as meristic counts and body shape have long been used in stock identification. Fifty striped seabream, Lithognathus mormyrus, individuals were sampled from the south Black Sea between January 2020 and November 2020. Morphometric characteristics were given as the percentage of total length (TL%). Species identification and shape differences between sexes of striped seabream were analyzed by different statistical methods. The biggest maximum length and weight values (TL=310 mm for TW=399.73 g) were found for the southern Black Sea in this study. The mean TL of female individuals (X=205.26 mm) was found higher than male individuals (X=199.10 mm). The TL% ratio of head length was found as 24.45% for all individuals. In this study, isometric growth (t=2.009, p>0.05) was determined for all individuals and the length-weight relationship (LWR) was found as W=0.013TL3.003 (r²=0.983). This study revealed that the morphological characteristics of L. mormyrus differ significantly between female and male individuals and the species may be a good example of sexual dimorphism. [ABSTRACT FROM AUTHOR]

The knowledge of morphological relationships and particularly of those concerning fish body girth (G) with total length (TL) is necessary in gear selectivity and specifically the technical measures to avoid capture of undersized individuals. This study concerns 24 marine species exploited by the small-scale coastal fleet in the Aegean Sea (eastern Mediterranean Sea), for 6 of which, the TL-G relationships are mentioned for the first time in the Mediterranean Sea and the adjacent seas. Samples were collected seasonally, from April 2016 to February 2017. The coefficients of the linear regression of body girth in three body positions, (Geye, posterior to the eye; Ghead at the posterior end of the operculum; Gmax at the maximum body depth), with the total length were estimated for each species and for the groups formatted when Geye, Ghead and Gmax were plotted against total length for all the species combined. Statistically significant differences among the three groups were detected (ANCOVA, P<0.001). Comparison of the total length-body girth relationships for 18 species previously studied in different geographic areas of the Mediterranean and the adjacent seas, showed differences mainly with the results from Portuguese waters for certain species populations. Based on the resulted equations, the maximum girth (Gmax) corresponding to the Minimum Conservation Reference Size (MCRS) and to the total length at maturity (Lm) were calculated for each species. Identified mesh sizes respective to Gmax values were quite larger than the minimum legal mesh size for gillnets and the inner sheet of trammel nets, indicating that the relevant current fisheries regulations cannot meet the requirements for sustainable exploitation of fish resources. [ABSTRACT FROM AUTHOR]

Anadromous river herring have declined in many parts of their range, leading to fisheries management efforts to help repopulate this species by improving connectivity of rivers and restoring populations by fish transfers. With data lacking on parasites in these species, this study sought to better understand myxozoans across various life stages and habitats in river herring populations in New Jersey, USA. We compared fish from riverine habitats during early-life growth and adults returning to spawn, marine-phase fish, and landlocked Alewife populations. Three myxozoan species were identified in young-of-the-year (YOY) anadromous river herring, including Kudoa clupeidae in the skeletal musculature, Myxobolus mauriensis in the rib cartilage, and an uncharacterized coelozoic myxozoan within the lumen of mesonephric tubules. In YOY river herring, Blueback Herring were 2 times more likely to be infected by K. clupeidae than Alewife (p = 0.019) and in the Maurice River, fish were 4 times more likely to be infected with M. mauriensis than fish from Great Egg Harbor River (p = 0.000) and 11 times more likely than the Delaware River (p = 0.001). Spawning adult river herring were infected with a previously undescribed myxozoan parasite infecting the kidney. Sequencing the 18S rDNA indicated this species is closely related to Ortholinea species. Myxobolus mauriensis and the Ortholinea-like species were absent from marine-phase river herring indicating that infections were linked to river environments occurring during early-life growth and spawning, respectively. No myxozoans were present in landlocked Alewife, showing that similar infections occurring in rivers were absent in lake environments in the region. [ABSTRACT FROM AUTHOR]

Otolith morphology analysis is one of the main tools used for fish or fish stock identification. Moreover, otolith shape can also be used in animal dietary studies (stomach content) for the identification of prey fishes and their size according to the relationship between fish and otolith sizes. In the present study, the relationship between fish length and otolith morphological dimensions was investigated for the sabre squirrelfish, Sargocentron spiniferum (Forsskål, 1775) (family: Holocentridae). Samples of 185 fish were collected from the coast of the Red Sea, Egypt. To analyze the relationship between fish and otolith, otolith morphometric measurements (length, width, area, perimeter, weight, sulcus, and ostium) and shape factors (aspect ratio, compactness, form factor, rectangularity, roundness, ellipticity, squareness) describing the outline shape were extracted using image analysis. Generalized linear models were applied for the relationship between body length and each otolith morphology feature. From the relationships between the total length of fish and fourteen morphology features, only otolith length, caudal length, and squareness were significantly correlated with fish size. Our results provide more information for the relationship between fish length and otolith morphometric features. [ABSTRACT FROM AUTHOR]

Maintaining standing genetic variation is a challenge in human-dominated landscapes. We used genetic (i.e., 16 short tandem repeats) and morphological (i.e., length and weight) measurements of 593 contemporary and historical brown trout (Salmo trutta) samples to study fine-scale and short-term impacts of different management practices. These had changed from traditional breeding practices, using the same broodstock for several years, to modern breeding practices, including annual broodstock replacement, in the transnational subarctic Pasvik River. Using population genetic structure analyses (i.e., Bayesian assignment tests, DAPCs, and PCAs), four historical genetic clusters (E2001A-D), likely representing family lineages resulting from different crosses, were found in zone E. These groups were characterized by consistently lower genetic diversity, higher within-group relatedness, lower effective population size, and significantly smaller body size than contemporary stocked (E2001E) and wild fish (E2001F). However, even current breeding practices are insufficient to prevent genetic diversity loss and morphological changes as demonstrated by on average smaller body sizes and recent genetic bottleneck signatures in the modern breeding stock compared to wild fish. Conservation management must evaluate breeding protocols for stocking programs and assess if these can preserve remaining natural genetic diversity and morphology in brown trout for long-term preservation of freshwater fauna. [ABSTRACT FROM AUTHOR]

This study assesses the use of stable isotopes (δ13C and δ15N) and trace elements in gills (G), liver (L), and muscle (M) of the most commercially important migratory fish from the La Plata Basin, Prochilodus lineatus, as habitat proxies. With this purpose, fish and sediment (S) samples from the Paraná River and Río de la Plata Estuary were analyzed. Results showed differences in the stable isotopic ratios in fish tissue and sediments between the river and the estuary. In particular, δ15N values of the estuary samples were significantly lower (G = 7.38‰; L = 6.60‰; M = 8.61‰ and S = 4.36‰) than those from the river (G = 11.30–11.53‰; L = 11.03–12.35‰; M = 11.27–11.31‰, and S = 6.78–7.72‰), which could denote a shift in the isotopic baseline between these environments. Quadratic discriminant analysis effectively discriminates between sampling sites with high classification rates (L = 97.5%; G = 90%, and M = 82.5%), suggesting that combining stable isotopes and trace elements is useful to discriminate between fish populations. The liver was the most suitable tissue as a habitat indicator, using mainly δ15N, δ13C, Cr, and Hg as natural markers, and capable of discriminating between sites with a relatively high geographic resolution. Due to the spatial isotopic heterogeneity found in the La Plata Basin, these natural markers could be useful for studying other aquatic organisms' habitat use. [ABSTRACT FROM AUTHOR]

Understanding of trophic structure and flow of energy within river systems is essential for informed management of these ecosystems and conservation of native fish fauna and fisheries resources. Food resources used by riverine fish depend on productivity within the main stem and adjacent floodplains, terrestrial inputs, and longitudinal and lateral hydrologic connectivity.Trophic ecology of puye (Galaxias maculatus Jenyns, 1842) in Chilean river systems remains poorly understood and studies that combine short‐term (stomach content) and long‐term (stable isotope analyses) analyses have not been performed to date. In this study, we assessed spatial variability in diet of puye based on both stomach content and analyses of stable isotopes of carbon and nitrogen in 10 river systems of southern Chile (including main stem, headwater lakes, and estuaries). Fish in the main stems of more northern rivers, with predictable flow regimes, were characterised by the most diverse diets, broad niche space, and high proportion of terrestrial prey items and zooplankton in diet. Fish collected in lakes were characterised by narrow isotopic niche space and diet dominated by zooplankton.Diet of G. maculatus in Chilean river systems is associated with characteristics of riverine habitats within each river system (lentic, lotic, and estuarine) and hydrologic connectivity among them. Indeed, connectivity with floodplain habitats and direct supply from headwater lakes appeared to be primary drivers of fish diet in systems where these are present. These supplies maintain fish populations of good condition and allow freshwater recruitment. Therefore, maintaining seasonal flow dynamics and connectivity is essential to preserve the natural function of these river systems and conserve native fish populations. [ABSTRACT FROM AUTHOR]

Populations of generalist fish can be composed of individuals specialised to a small subset of food resources, a process known as individual specialisation. In this study, we hypothesised that variation in the diet and morphology of individuals is related to habitat complexity and that greater levels of individual specialisation are found at intermediate levels of macrophyte biomass. Fish and aquatic plants were sampled in 15 multispecific macrophyte stands with different biomasses in the Baía River (Upper Paraná River floodplain). We assessed habitat complexity using the biomass of aquatic macrophytes (three levels of classification: low, intermediate and high). The diet of Moenkhausia forestii was evaluated with the volumetric method. To assess individual diet specialisation, we used the IS (specialisation index) and NODF (nestedness based on overlap and decreasing fill) index and for individual morphological specialisation we used ecomorphological metrics. We tested for a correlation between diet and morphology with a Mantel test. Contrary to our hypothesis, IS and NODF values indicated greater individual specialisation in the diet of M. forestii from low macrophyte biomass. However, the greatest individual morphological specialisation was found in macrophyte stands with intermediate biomasses. The Mantel test showed that there was no significant correlation between diet and morphology. Thus, individual specialisation of M. forestii diet may be related to an increase in competition (likely intraspecific) in stands with low macrophyte biomass, while morphological specialisation is probably related to greater resources availability and accessibility within stands of intermediate macrophyte biomass. [ABSTRACT FROM AUTHOR]

The ability to detect threatening stimuli and initiate an escape response is essential for survival and under stringent evolutionary pressure. In diverse fish species, acoustic stimuli activate Mauthner neurons, which initiate a C‐start escape response. This reflexive behavior is highly conserved across aquatic species and provides a model for investigating the neural mechanism underlying the evolution of escape behavior. Here, we characterize evolved differences in the C‐start response between populations of the Mexican cavefish, Astyanax mexicanus. Cave populations of A. mexicanus inhabit an environment devoid of light and macroscopic predators, resulting in evolved differences in various morphological and behavioral traits. We find that the C‐start is present in river‐dwelling surface fish and multiple populations of cavefish, but that response kinematics and probability differ between populations. The Pachón population of cavefish exhibits an increased response probability, a slower response latency and speed, and reduction of the maximum bend angle, revealing evolved differences between surface and cave populations. Analysis of the responses of two other independently evolved populations of cavefish, revealed the repeated evolution of reduced angular speed. Investigation of surface‐cave hybrids reveals a correlation between angular speed and peak angle, suggesting these two kinematic characteristics are related at the genetic or functional levels. Together, these findings provide support for the use of A. mexicanus as a model to investigate the evolution of escape behavior. Highlights: We identify dynamic changes in the speed and mechanics of the acoustic startle response between populations. These findings present cavefish as a model for studying the evolution of the startle response. [ABSTRACT FROM AUTHOR]

Over the last 100 years, fishes native to the Southwestern United States have faced a myriad of biotic and abiotic pressures which has resulted in most being federally listed as endangered or threatened. Most notably, water diversions and the introduction of non-native fishes have been the primary culprits in causing the downfall of native fish populations. We describe how recent studies of morphology, physiology, and behavior yield insights into the failed (occasionally successful) management of this vanishing biota. We describe how understanding locomotor morphologies, physiologies, and behaviors unique to Southwestern native fishes can be used to create habitats that favor native fishes. Additionally, through realizing differences in morphologies and behaviors between native and non-native fishes, we describe how understanding predator–prey interactions might render greater survivorship of native fishes when stocked into the wild from repatriation programs. Understanding fundamental form–function relationships is imperative for managers to make educated decisions on how to best recover species of concern in the Southwestern United States and worldwide. [ABSTRACT FROM AUTHOR]

The otoliths of teleost fishes exhibit a great deal of inter- and intra-species shape variation. The ecomorphology of the saccular otolith is often studied by comparing its shape across species and populations inhabiting a range of environments. However, formal tests are often lacking to examine how closely variation in otolith shape follows the genetic drift of a neutral trait. Here, we examine patterns of saccular otolith shape variation in four species of African cichlid fishes, each sampled from three field sites. All four species showed the greatest level of otolith shape variation along two principal component axes, one pertaining to otolith height and another to the prominence of an anterior notch. Fish collected from the same site possessed similarities in saccular otolith shape relative to fish from other sites, and these 'site-difference' signatures were consistent across species and observable in both sexes. Sex-differences in saccular otolith shape differed in magnitude from site to site. Population differences in saccular otolith shape did not covary with neutral genetic differentiation between those populations. Otolith height, in particular, displayed large site similarities across species, weak correlation with neutral genetic variation, and strong sex differences, collectively suggesting that otolith shape represents a selectively non-neutral trait. [ABSTRACT FROM AUTHOR]

Fish population monitoring systems based on underwater video recording are becoming more popular nowadays, however, manual processing and analysis of such data can be time-consuming. Therefore, by utilizing machine learning algorithms, the data can be processed more efficiently. In this research, authors investigate the possibility of convolutional neural network (CNN) implementation for fish species classification. The dataset used in this research consists of four fish species (Plectroglyphidodon dickii, Chromis chrysura, Amphiprion clarkii, and Chaetodon lunulatus), which gives a total of 12859 fish images. For the aforementioned classification algorithm, different combinations of hyperparameters were examined as well as the impact of different activation functions on the classification performance. As a result, the best CNN classification performance was achieved when Identity activation function is applied to hidden layers, RMSprop is used as a solver with a learning rate of 0.001, and a learning rate decay of 1e-5. Accordingly, the proposed CNN model is capable of performing high-quality fish species classifications. [ABSTRACT FROM AUTHOR]

Age‐related changes in DNA methylation do occur. Taking advantage of this, mammalian and avian epigenetic clocks have been constructed to predict age. In fish, studies on age‐related DNA methylation changes are scarce and no epigenetic clocks have been constructed. However, in fisheries and population dynamics studies there is a need for accurate estimation of age, something that is often impossible for some economically important species with the currently available methods. Here, we used the European sea bass, a marine fish the age of which can be determined with accuracy, to construct a piscine epigenetic clock, the first one in a cold‐blooded vertebrate. We used targeted bisulfite sequencing to amplify 48 CpGs from four genes in muscle samples and applied penalized regressions to predict age. We thus developed an age predictor in fish that is highly accurate (0.824) and precise (2.149 years). In juvenile fish, accelerated growth due to elevated temperatures had no effect on age prediction, indicating that the clock is able to predict the chronological age independently of environmentally‐driven perturbations. An epigenetic clock developed using muscle samples accurately predicted age in samples of testis but not ovaries, possibly reflecting the reproductive biology of fish. In conclusion, we report the development of the first piscine epigenetic clock, paving the way for similar studies in other species. Piscine epigenetic clocks should be of great utility for fisheries management and conservation purposes, where age determination is of crucial importance. [ABSTRACT FROM AUTHOR]

In the 1960-1970s, three coregonid fishes (Coregonus albula, Coregonus maraenoides and Coregonus peled) were imported from the former Soviet Union and introduced to some reservoirs in Bulgaria. Irregular import, hatching in local fish-farms and stocking continued until the 1990s. The aim of our study was to examine the occurrence of the alien coregonid species in one of the stocked reservoirs, Iskar Reservoir, and to identify the species recorded based on their morphology. A total of 54 coregonid specimens were collected at five stations in the period from October to March in 2015 and 2016. According to the studied morphometric and meristic data, all the coregonid specimens collected were identified as the Peipsi whitefish, Coregonus maraenoides. The morphology of C. maraenoides from Iskar Reservoir revealed some differences from the native population (Peipus Lake, Estonia and Russia), being most likely a result of adaptation of this species to the local environmental conditions or related to the brood stock management in the fish farms. Our results showed that C. maraenoides has successfully established in the reservoir. The existence of self-sustaining population has been supported by the following: a long period from the last stocking of C. maraenoides to the reservoir up to our study (>15 years); presence of specimens of different size classes in the catches; and presence of sexually mature female and male specimens. [ABSTRACT FROM AUTHOR]

The ability to move between habitats has important implications for fitness in many species. In‐stream barriers such as culverts can impede movements of riverine fishes and thus reduce connectivity between habitats. The ability of fish to overcome barriers is related to the features of the environment and the barrier itself, but also to physiological, morphological and behavioural traits of the fish. Among these, body shape varies among and within species, and influences swimming ability, a key component of passage performance through culverts.We conducted an experimental study on wild brook trout (Salvelinus fontinalis) to assess the effects of individual body shape on attempt rate and passage success through culverts on six streams.A more streamlined body shape was associated with an increased motivation to enter and ascend the culverts, and, to a lesser extent, with the probability of successful passage once an attempt was staged. Motivation and successful passage were also influenced by the density of conspecifics below the culvert, time of day, fish body size and water velocity.Policy implications. While fish body shape is expected to influence swimming performance, our research shows the most important effect of body shape to be on an individual's motivation to stage passage attempts at culverts. This study points to an important connection between behaviour and morphological traits that influence passage success and suggests that in‐stream barriers may be an important agent of selection on behaviour and morphology in wild fish populations. [ABSTRACT FROM AUTHOR]

Spatial variability in phenotypic characteristics within a fish population may be used to infer the existence of multiple stocks, and knowledge of the population structure of exploited species is important for their sustainable management. In this study we investigated geographic variability in meristic (vertebral count) and morphometric (body shape) characteristics of sardine Sardinops sagax from three southern African regions: Namibia, the South African west coast, and the South African south coast. There were significant regional differences in vertebral counts, with Namibian fish tending to have more vertebrae than South African fish, but with no difference between sardine off the South African west and south coasts. Body shape was characterised using morphometric landmarks, and shape changes were investigated using geometric morphometrics, with influences on fish shape assessed using multivariate regressions. To remove the effects of allometry, the 22 shape variables (represented by Procrustes coordinates) were regressed against fish size (represented by centroid size). There was a significant allometric effect, which was removed by using the residuals of these regressions in further analyses. A multivariate multiple regression was applied to the 22 size-corrected shape variables and to three covariates: condition factor, stomach fullness and fat stage. The significant influence of these covariates was removed by using the residuals from this regression in a canonical variate analysis, where corrected shape variables were classified in relation to region, year and sex. The Mahalanobis distances from the canonical variate analysis differed significantly for most combinations of classifier variables, with clear separations among the three regions. Sardinops sagax off Namibia had thicker bodies and more contracted tail regions than South African fish, whereas S. sagax off the South African south coast had thinner bodies and smaller heads than those off the west coast. These results support the hypothesis of multiple sardine stocks around southern Africa. [ABSTRACT FROM AUTHOR]

Eubleekeria splendens (Cuvier, 1829) also called Splendid ponyfish, is commercially important and has wide distribution along the Indian coast. The species shows dominance along the south-west and south-east coast but there is no detailed information on the stock structure available from Indian waters. Therefore the present study focused on understanding the stock structure based on putative spawning stock. Fish samples were collected from five locations: Three from the west and two from the east coast. Twenty-four morphometric variables were measured using a box-truss network method. Principal component analysis delineated the population into east and west coast stocks. With respect to locations, each sampling unit formed separate clusters, thus representing isolated stocks. The samples from Mangaluru produced a single clustering with Kozhikode samples indicating that the morphological profiles of these two populations are homogeneous. Multiple comparisons on the factor scores indicated two independent stocks on the east coast, whereas the fishery on the west coast is replenished by a single stock on south-west coast but a separate stock on the north-west coast. Thus, information on the spatial structure of phenotypic stock makes it mandatory to understand the biology and dynamics of these isolated stocks of E. splendens separately and thereby a traditional stock assessment should be performed to estimate current resource status stock-wise in terms of biological reference points. [ABSTRACT FROM AUTHOR]

Abstract The biofloc technology, can successfully use in tilapia fingerling commercial production with some benefits, nevertheless the studies are scarce. The objective was to determine the effect of the BFT system using different carbon sources on the productive parameters, demand of feed and water, in tilapia fingerlings (Oreochromis niloticus) production. The study was conducted at the company Centro Acuícola del Estado de Sonora, it was simple randomized with three treatments and one control (in triplicate). The treatments (carbon sources) were corn flour (CF), wheat flour (WF), sugar (SU) and a control (C) traditional system. The experiment was carried out in 12 glass fiber tanks (100 L) at a density of 3 ind/L (0.05 g/ind). The water quality, productive parameters, cost of consumed food and volume of used water were determined. At the end of the growing period, the lowest weight corresponded to WF (0.30 g/ind) and the highest to SU (0.44 g/ind) and C (0.41 g/ind). The FCR in biofloc treatments varied from 1.28 to 1.51, with no significant differences among them, whereas the 2.33 registered in C was significantly higher (P <.05). The control had the lowest protein efficiency (1.17), while the maximum was recorded in SU (2.11). Proximal tissue analysis showed a crude protein content of 63.9 to 71.0 g/100 g dry basis, with significant differences among treatments. The survival in the stress test was similar among treatments (98.3–99.3%). To produce a batch of 10,000 fingerlings, the used water in BFT was 6.1–7.8 m3 and 23.9 in the traditional system. The supplied feed in BFT varied from 5.8–6.3 kg/batch; meanwhile in the control it raised to 10.7 kg/batch. The cost of feed + C source was estimated in 6.53–7.80 USD/batch in BFT and of 9.13 USD/batch in the control. The fingerlings obtained in CF and SU treatments had a similar zootechnical performance to the control, but the savings in feed and water were significant. Highlights • The production of tilapia fingerlings was evaluated in commercial facilities conditions. • The fingerlings obtained in BFT, with corn and sugar as C source, had similar zootechnical performance to the control. • BFT promote significant savings in feed (41.1 to 58.9%) and water (67.4 to 75.5%) compared to the traditional method. • High percentages of survival (98.3 and 99.3) were obtained after the stress test in all treatments. • BFT could improve the economic revenue in tilapia fingerlings production. [ABSTRACT FROM AUTHOR]

Quantifying changes in functional diversity, the facet of biodiversity accounting for the biological features of organisms, has been advocated as one of the most integrative ways to unravel how communities are affected by human-induced perturbations. The present study assessed how functional diversity patterns varied among communities that differed in the degree to which non-native species dominated the community in temperate lake fish communities and whether accounting for intraspecific functional variability could provide a better understanding of the variation of functional diversity across communities. Four functional diversity indices were computed for 18 temperate lake fish communities along a gradient of non-native fish dominance using morphological functional traits assessed for each life-stage within each species. First, we showed that intraspecific variability in functional traits was high and comparable to interspecific variability. Second, we found that non-native fish were functionally distinct from native fish. Finally, we demonstrated that there was a significant relationship between functional diversity and the degree to which non-native fish currently dominated the community and that this association could be better detected when accounting for intraspecific functional variability. These findings highlighted the importance of incorporating intraspecific variability to better quantify the variation of functional diversity patterns in communities facing human-induced perturbations. [ABSTRACT FROM AUTHOR]

Amblyceps mangois or the "Indian torrent catfish" is a tropical, freshwater, hill-stream species that has ornamental-commercial value and has been included within the "Endangered" category in the list of threatened freshwater fishes of India. A total fourteen populations from the Terai and Dooars region of northern West Bengal, India were analyzed to study the genetic architecture of this species with the help of RAPD and ISSR markers. The observed number of alleles (S), Nei's gene diversity (H) and Shannon's information index (H' or I) showed the highest values in the Teesta river system and the lowest values in the Mahananda river system. The UPGMA-based dendrogram and PCoA, based on RAPD and ISSR fingerprints, showed that the Mahananda and the Teesta river populations formed a group distinct from the remaining Jaldhaka river population. We further considered the fourteen riverine populations into nine groups according to the continuity of the water flow for SHE analysis. It was found that the three components, i.e. the pattern of diversity (H'), richness (S) and evenness (E), have varied and fluctuated across all fourteen populations from higher to lower altitude as the river flows downstream. AMOVA, PhiPT and genetic hierarchical analyses showed that a distinct hierarchical structure is present in Amblyceps populations in the study region. Low levels of genetic diversity/variation and genetic hierarchical structure with high genetic divergence were found in the present study as an indicator of the recent picture of threatened status of this species. This study is the initial attempt to characterize and evaluate the genetic architecture of the species from this region and there is a scope to manage the evolutionary significant units (ESU) for conservation purpose. [ABSTRACT FROM AUTHOR]

The present research focuses to examine the meristic and landmark-based morphometric variations of barred spiny eel Macrognathus pancalus from four populations namely Dhakuria beel, Jessore (DBJ); Bohnni boar, Gopalgonj (BBG); the Arial kha river, Madaripur (AKRM) and the Nabaganga river, Jhenidah (NRJ) in Bangladeshi freshwaters. Six meristic counts were compared among four populations and significant differences were observed in number of caudal fin rays and number of pelvic fin rays in all meristic characters. The truss protocol was used in the present study based on six general morphometrics and fifteen truss measurements. Univariate statistics showed that five (standard length (SL), upper jaw length (UJL), lower jaw length (LJL), head depth (HD) and inter orbital (IO)) of six morphometric and eleven truss networks (viz. 2-3, 3-4, 5-6, 6-7, 7-8, 1-8, 2-8, 3-8, 3-7, 4-7 and 5-7) among fifteen truss measurements differed significantly. Cannonical discriminate function analyses were conducted among samples and the populations were fully intermingled. Pooled withingroup correlation showed morphometric and landmark measurements; the first discriminant function (DF) accounted for 79%, the second DF accounted for 15.9% and third DF accounted for 5.1% of group variability. An euclidian dendrogram was prepared based on morphometric and truss measurements in four populations, where two clusters were mainly formed, in which first cluster formed by NRJ population was fully separated, and the second cluster was formed by two populations of AKRM and DBJ. Additionally, a subcluster BBG was formed with AKRM. On the basis of morphometric and truss measurements, 68.8%, 83.6%, 55.6% and 80% of original grouped cases were correctly classified in NRJ, AKRM, DBJ and BBG, respectively. These results specify the presence of different stocks of fish from four aquatic habitats. This study is highly significant for proper conservation and effective management of M. pancalus populations as well as for the scientific community for further research. [ABSTRACT FROM AUTHOR]

Selection on morphological traits can vary across the range of species, inducing a mosaic of phenotypes across populations. Intraspecific morphological divergence had been demonstrated for many fish groups inhabiting environments with varying abiotic or biotic selective pressures. Such intraspecific phenotypic variation can have a strong influence on the ecologies of species. In the current study, we examined patterns of intraspecific morphological divergence between two populations of Sarotherodon melanotheron and Coptodon guineensis in Lake Ahémé and Porto-Novo lagoon, Benin. Using multiple morphological traits, we demonstrated intraspecific morphological divergence between Lake Ahémé and Porto-Novo lagoon for these species. However, evidence for parallel divergence was found for these two species, implying a similar response to selective pressures might have been acting on labile traits. In addition, species specific morphological changes observed in the current study might be because of differing responses to similar selective forces or taxon-specific selective forces acting on labile traits. The intraspecific trait divergence demonstrated in the current study suggests several possible selective pressures acting on these populations, yet the cause of this divergence remains unknown and additional studies are required to test these inferences. [ABSTRACT FROM AUTHOR]

Phenotypic plasticity is the ability of a genotype to produce different phenotypes depending on the environment. It has an influence on the adaptive potential to environmental change and the capability to adapt locally. Adaptation to environmental change happens at the population level, thereby contributing to genotypic and phenotypic variation within a species. Predation is an important ecological factor structuring communities and maintaining species diversity. Prey developed different strategies to reduce their vulnerability to predators by changing their behaviour, their morphology or their life history. Predator-induced life history responses in Daphnia have been investigated for decades, but intra- and inter-population variability was rarely addressed explicitly. We addressed this issue by conducting a common garden experiment with 24 clonal lines of European Daphnia galeata originating from four populations, each represented by six clonal lines. We recorded life history traits in the absence and presence of fish kairomones. Additionally, we looked at the shape of experimental individuals by conducting a geometric morphometric analysis, thus assessing predator-induced morphometric changes. Our data revealed high intraspecific phenotypic variation within and between four D. galeata populations, the potential to locally adapt to a vertebrate predator regime as well as an effect of the fish kairomones on morphology of D. galeata. [ABSTRACT FROM AUTHOR]

Ngangtse Co (4535 m a.s.l., 840 km2) is a typical endorheic lake in Tibet. In 2015, we investigated the fish resource in this lake and its rivers and collected two Triplophysa species, including T. brevicauda and T. stewarti. To understand the evolutionary dynamics of Triplophysa in Ngangtse Co, the adaptive and genetic divergence between river and lake populations were investigated by analysing their morphological characteristics and mitochondrial COI and Cytb sequences. Among all of 277 samples, the ratios of the number of T. brevicauda to T. stewarti were 27:8, 34:11, 14:24, 37:0, 16:23 and 0:83 in river populations RA, RB, RC, RD, lakeside population LSE and lake population L, respectively. For T. brevicauda, a small but significant genetic divergence (mean FST = 0.0890) was detected between population RD and other three river populations, and significant morphological differences of body length/body height and body length/caudal peduncle length were observed between population RD and RA, RB, suggesting an association between differentiation and geographical distance. For T. stewarti, very high levels of genetic differentiation was observed between population L and other populations with the FST values ranging from 0.4737 (L-RA) to 0.7074 (L-RC). In addition, significant differences of most of morphological characteristics were observed between the lake (L) and river (RC) populations, indicating that lake fish of T. stewarti was a population that showed a long-term adaptation to the saltwater lake. These results provide insights on the evolutionary dynamics of Triplophysa in Ngangtse Co and help us to understand the fish speciation in endorheic lakes on the Qinghai-Tibetan Plateau. [ABSTRACT FROM AUTHOR]

Morphometrics is a beneficial, straightforward and relatively simple tool for fish stock delineation and identification. Analysis of spatial divergence, and morphological traits in relation to other factors, are of high interest both for management and in ecological studies. Morphology can help to delineate stocks, inform about local adaptations as well as ecological role the species play in the ecosystem. Morphological variation and differentiation of three-spined stickleback ( Gasterosteus aculeatus ) has been thoroughly studied in small freshwater systems, but less is known about differentiation of the species in an open marine system. The Baltic Sea inherits substantial environmental gradients in salinity, temperature, as well as in the nature and intensity of predation, gradients that all can foster local morphological adaptation and potential population differentiation. Previous studies have revealed some morphological differentiation of the species along the coast, but studies from the offshore are lacking. In this study we used traditional as well as geometric morphometrics to analyse divergence in morphological traits like body plate numbers, body- and otolith shape among sticklebacks from two major genetic clusters inhabiting different parts of the Baltic Sea. Our results show that fish from one area (Curonian Lagoon) representing one of the clusters had significantly higher number of body plates, potentially indicating a response to higher predation pressure compared to the other areas studied. Body shape also significantly differed among locations with deeper bodied fish in the Curonian Lagoon. The most conservative and least plastic trait studied, otolith shape, did, however, not show any divergence among the areas studied. Our results suggest morphological divergence in plastic traits like body plates and body shape in response to local environmental conditions. The lack of divergence in otolith shape further suggests that the degree of population differentiation is weak or rather recent, as also highlighted in earlier studies using molecular markers or synchrony in population abundances. In all, our study shows that at least the number of body plates can serve as an effective stock delineator among genetic clusters of three-spined sticklebacks in the Baltic Sea. [ABSTRACT FROM AUTHOR]

Size-selective mortality owing to lack of energy reserves during the first marine winter has been suggested to be a result of juvenile salmon failing to reach a critical size or condition by the end of their first marine summer and not surviving the following winter due to this presumed energy deficit. This hypothesis implies strong size dependency of mortality, and is subject to empirical data support for acceptance. Scale circulus spacing has been interpreted as an index for body size, and we reviewed the effect of size-selective mortality with a knife-edge mortality function on descriptive statistics for a scale circulus spacing index (SCSI). In order to invoke size selection as an important driver of mortality during the first year of ocean rearing, it is necessary to demonstrate not only that size-selective mortality is directed towards the smaller members of the population, but that the selective nature of the mortality can account for a substantial portion of the observed mortality. If the assumption is made that a random sample of a single juvenile population has been obtained, then studies that employ a SCSI to infer size-selective mortality coupled with a critical size limit must demonstrate a shift toward larger values of the SCSI, but also a concomitant reduction in the variance and range of the SCSI and an increase in the skewness and kurtosis of the SCSI values. Through simulation we found that the percentage of adults that displayed a SCSI value greater than the maximum observed in the juvenile sample was highly dependent on the initial juvenile sample size and size-selective mortality rate. Geographical distributions of juvenile Pacific salmon can be stratified by size, with larger individuals migrating earlier from local ocean entry locations than smaller individuals, and thus differential timing migration of juveniles based upon body size prior to the collection of the marine juvenile sample may be a more plausible explanation of published trends in the SCSI, rather than invoking substantial size-selective mortality and a critical size limit. [ABSTRACT FROM AUTHOR]

Abstract: An important step in diagnosing local adaptation is the demonstration that phenotypic variation among populations is at least in part genetically based. To do this, many methods experimentally minimize the environmental effect on the phenotype to elucidate the genetic effect. Minimizing the environmental effect often includes reducing possible environmental maternal effects. However, maternal effects can be an important factor in patterns of local adaptation as well as adaptive plasticity. Here, we report the results of an experiment with males from two populations of the poeciliid fish, Heterandria formosa, designed to examine the relative influence of environmental maternal effects and environmental effects experienced during growth and development on body morphology, and, in addition, whether the balance among those effects is unique to each population. We used a factorial design that varied thermal environment and water chemistry experienced by mothers and thermal environment and water chemistry experienced by offspring. We found substantial differences between the two populations in their maternal and offspring norms of reaction of male body morphology to differences in thermal environment and water chemistry. We also found that the balance between maternal effects and postparturition environmental effects differed from one thermal regime to another and among traits. These results indicate that environmental maternal effects can be decidedly population‐specific and, as a result, might either contribute to the appearance of or blur evidence for local adaptation. These results also suggest that local adaptation might also occur through the evolution of maternal norms of reaction to important, and varying, environmental factors. [ABSTRACT FROM AUTHOR]

Hyphessobrycon itaparicensis was originally described from a small stream in the Itaparica coastal island, Bahia State, Brazil, and has been sampled in several coastal rivers draining Bahia and Sergipe States. Broad examination of type material and recently collected specimens resulted in the redescription provided herein. The presence of one humeral blotch, absence of pseudotympanum, and conservation aspects of H. itaparicensis are briefly discussed. Data obtained from the original description, paratypes and topotypes of H. sergipanus showed broad overlap with H. itaparicensis and absence of morphological diagnostic features supporting the recognition of H. sergipanus as a valid species. Thus, H. sergipanus is considered as junior synonym of H. itaparicensis. We emphasize the need of examining large population samples and type material of similar congeners to avoid improper propositions of new specific names. [ABSTRACT FROM AUTHOR]

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Resource polymorphism, whereby ancestral trophic generalists undergo divergence into multiple specialist morphs, is common in salmonid fish populations inhabiting subarctic lakes. However, the extent to which such resource specialization into the three principal lake habitats (littoral, profundal, and pelagic) affects patterns of contaminant bioaccumulation remains largely unexplored. We assessed total mercury concentrations (THg) of European whitefish ( Coregonus lavaretus (L.)) and their invertebrate prey in relation to potential explanatory variables across 6 subarctic lakes, of which three are inhabited by polymorphic (comprised of four morphs) and three by monomorphic populations. Among invertebrate prey, the highest THg concentrations were observed in profundal benthic macroinvertebrates, followed by pelagic zooplankton, with concentrations lowest in littoral benthic macroinvertebrates in both lake types. Broadly similar patterns were apparent in whitefish in polymorphic systems, where average age-corrected THg concentrations and bioaccumulation rates were the highest in pelagic morphs, intermediate in the profundal morph, and the lowest in the littoral morph. In monomorphic systems, age-corrected THg concentrations were generally lower, and showed pronounced lake-specific variation. In the polymorphic systems, we found significant relationships between whitefish muscle tissue THg concentration and gill raker count, resource use, lipid content and maximum length, whilst no such relationships were apparent in the monomorphic systems. Across all polymorphic lakes, the major variables explaining THg in whitefish were gill raker count and age, whereas in monomorphic systems, the factors were lake-specific. Whitefish resource polymorphism across the three main lake habitats therefore appears to have profound impacts on THg concentration and bioaccumulation rate. This highlights the importance of recognizing such intraspecific diversity in both future scientific studies and mercury monitoring programs. [ABSTRACT FROM AUTHOR]

Identification of ecologically mediated mechanisms that drive population dynamical changes in fish communities and polymorphic fish stocks such as those of whitefish, Coregonus lavaretus , requires data that are seldom available in freshwater systems. We assessed the stock of each morphologically distinguishable whitefish form (native lesser sparsely-rakered whitefish, native blue whitefish and stocked northern densely-rakered whitefish) in the Lake Oulujärvi during 1973–2014, and related temporal variations in population dynamics to environmental data and catch per unit of effort (CPUE) data on other species having fisheries significance. The results demonstrated a synchronous major decline in the abundance of the native whitefish forms and a decline in the length-at-age of all forms. During the study period, summer time water temperature increased and surface water phosphorous concentration decreased. Recruitment in all whitefish forms showed Ricker-type dependence on spawning stock biomass but little residual correlation with the environmental parameters. Cross-correlation analyses suggested that the re-establishment of pikeperch Sander lucioperca population affected negatively both the recruitment and biomass of whitefish but the exact effect mechanisms require further assessment. Our results exemplify that ecosystem-based fisheries management in inland waters must take into account both natural and human-induced environmental changes as well as stockings, and that knowledge-based inland fisheries management is inherently data-intensive. [ABSTRACT FROM AUTHOR]

Overfishing and depletion of wild fish stock are a major problem facing the fisheries sector in Nigeria, hence the need to carry out an extensive research on the biology of wild species. The aim of this study was to provide contributory information on the biology of Synodontis schall from Ogun River, Nigeria. Ninety fish samples were obtained from local fishermen bi-monthly between February and August, 2015. The length and weight of the specimen were measured and length-weight relationship was determined using the formula W=aLb. Gut content of the specimens was studied using the frequency of occurrence and numerical method. Index of stomach fullness was also determined monthly. Gut content revealed both plants and animal items consisting mainly of insects, rotifers, crustaceans, fish parts, algae etc. indicating omnivorous feeding habit. Percentage stomach fullness was higher during the peak of the wet season (July and August). Total length, standard length and weight of specimens were ranged between 15.4 and 29.0 cm, 10.1 and 23.5 cm and 50 g and 198 g, respectively. Length-weight analyses gave the values of 'b', 'a', and 'r' as 1.520, 1.115 and 0.8967, respectively, exhibiting a negative allometric growth pattern. The study therefore, shed light on the biology of the species and thus, contributes to documented facts about the species from the Akomoje reservoir, with a view towards developing the aquaculture of the reservoir. [ABSTRACT FROM AUTHOR]

Sympatric populations occur in many freshwater fish species; such populations are typically detected through morphological distinctions that are often coupled to food niche and genetic separations. In salmonids, trophic and genetically separate sympatric populations have been reported in landlocked Arctic char, whitefish and brown trout. In Arctic char and brown trout rare cases of sympatric, genetically distinct populations have been detected based on genetic data alone, with no apparent morphological differences, that is 'cryptic' structuring. It remains unknown whether such cryptic, sympatric structuring can be coupled to food niche separation. Here, we perform an extensive screening for trophic divergence of two genetically divergent, seemingly cryptic, sympatric brown trout populations documented to remain in stable sympatry over several decades in two interconnected, tiny mountain lakes in a nature reserve in central Sweden. We investigate body shape, body length, gill raker metrics, breeding status and diet (stomach content analysis and stable isotopes) in these populations. We find small significant differences for body shape, body size and breeding status, and no evidence of food niche separation between these two populations. In contrast, fish in the two lakes differed in body shape, diet, and nitrogen and carbon isotope signatures despite no genetic difference between lakes. These genetically divergent populations apparently coexist using the same food resources and showing the same adaptive plasticity to the local food niches of the two separate lakes. Such observations have not been reported previously but may be more common than recognised as genetic screenings are necessary to detect the structures. [ABSTRACT FROM AUTHOR]

Fish predation is important in shaping populations and community structure in aquatic systems. These predator-prey interactions can be influenced by environmental, behavioural and morphological factors. Morphological constraints influence the feeding performance of species, and interspecific differences can thus affect patterns of resource use. For piscivorous fishes that swallow prey whole, feeding performance has traditionally been linked to three key morphological constraints: oral gape, pharyngeal gape, and the cleithral gape. However, other constraints may be important. We therefore examine 18 potential morphological constraints related to prey capture and processing, on four predatory species (Cephalopholis urodeta, Paracirrhites forsteri, Pterois volitans, Lates calcarifer). Aquarium-based experiments were then carried out to determine capture and processing behaviour and maximum prey size in two focal species, C. urodeta and P. forsteri. All four species showed a progressive decrease in gape measurements from anterior to posterior with oral gape ≥ buccal ≥ pharyngeal ≥ pectoral girdle ≥ esophagus ≥ stomach. C. urodeta was able to process prey with a maximum depth of 27% of the predators’ standard length; for P. forsteri it was 20%. C. urodeta captured prey head-first in 79% of successful strikes. In P. forsteri head-first was 16.6%, mid-body 44.4%, and tail-first 38.8%. Regardless of capture mode, prey were almost always swallowed head first and horizontally in both focal species. Most internal measurements appeared too small for prey to pass through. This may reflect the compressibility of prey, i.e. their ability to be dorsoventrally compressed during swallowing movements. Despite examining all known potential morphological constraints on prey size, horizontal maxillary oral gape in a mechanically stretched position appears to be the main morphological variable that is likely to affect maximum prey size and resource use by these predatory species. [ABSTRACT FROM AUTHOR]

Truss-network analysis was applied to examine morphological differences among distinct populations of Channa gachua (Hamilton 1822). Ninety-eight fish individuals were collected from three-isolated habitats in north-eastern Thailand. Twenty-six truss variables were measured and then subjected to Burnaby's size adjustment for removing size-dependent effect. The transformed data were processed for univariate and multivariate statistical analyses. The multivariate ANCOVA showed highly significant differences between populations (Pillai's trace = 1.561, F = 10.102, p < 0.0001). The univariate ANCOVA presented the significant differences between 20 out of 26 truss variables (p < 0.05) representing morphological characters of head, trunk and caudal peduncle areas. The variability in body shape among three populations obviously showed by the first three components of PCA accounting for 49.98% of total variances. In addition, five variables from head area and three variables from body were selected to stepwise discriminant analysis, representing the first two discriminant functions (DF1 and DF2) accounted for 72.95 and 27.95% of shape variability, respectively. A high rate of correct classification of C. gachua to actual sampling locations was at 93.88%. The results support the existence of local adaptation of C. gachua across the isolated geographical locations, and indicate the presence of three phenotypic stocks of C. gachua regarding their habitat locations. [ABSTRACT FROM AUTHOR]

Curves describing the length-otolith size relationships for juveniles and adults of six fish species with widely differing biological characteristics were fitted simultaneously to fish length and otolith size at age, assuming that deviations from those curves are correlated rather than independent. The trajectories of the somatic and otolith growth curves throughout life, which reflect changing ratios of somatic to otolith growth rates, varied markedly among species and resulted in differing trends in the relationships formed between fish and otolith size. Correlations between deviations from predicted values were always positive. Dependence of length on otolith growth rate (i.e., 'growth effect') and 'correlated errors in variables' introduce bias into parameter estimates obtained from regressions describing the allometric relationships between fish lengths and otolith sizes. The approach taken in this study to describe somatic and otolith growth accounted for both of these effects and that of age to produce more reliable determinations of the length-otolith size relationships used for back-calculation and assumed when drawing inferences from sclerochronological studies. [ABSTRACT FROM AUTHOR]

Variation in the numbers of pectoral fin spines and rays, pelvic fin rays, gill rakers on the first gill arch, anal fin rays, and the number of vertebrae of Silurus triostegus Heckel were examined in specimens from 16 localities that span its entire distribution range in the Tigris, Euphrates, and Shatt al-Arab rivers in Iraq. The mean number of the six meristic traits increases toward high latitudes with maximum and minimum values in the north and south of Iraq. Based on cluster analysis and PCA, the Mesopotamian river samples were clearly separated into three distinct groups. The upper Tigris populations were isolated from those of the middle and southern populations of this river and from those of the Euphrates River. Possible reasons for such differentiation among populations are discussed, and the integration of research on this species among the countries neighboring Iraq is required. [ABSTRACT FROM AUTHOR]

Studies on morphological differences among populations from different ecological regions help towards understanding diversification of traits and is a fundamental step in adaptive radiation and ultimately, speciation. This study investigates the occurrence of variations in morphological traits among wild populations of zebrafish ( Danio rerio) from India that inhabit a variety of habitat and ecological regimes. Geometric morphometric methods and traditional morphometric analysis were used to quantify the extent of differences in morphological traits between four populations of wild D. rerio from still-water (stagnant) (Kalibazaar, in West Bengal) and slow -medium flowing (Asan, Kaushalya and Seripetkalwa in Uttarakhand, Haryana and Andhra Pradesh respectively) habitats within India. Multivariate analyses showed significant effect of populations on morphology, post-hoc paired comparisons between populations show differences in body size as well as shape across these populations. Relative warps analyses on the landmarks selected for body shape showed higher loadings for caudal peduncle, head and eye regions. Population-wise scatterplots along relative warp1 (RW1)- relative warp4 (RW4) axes revealed Asan population cluster expands beyond the other population clusters along the RW1- RW2 axes, while the Kalibazaar cluster spreads out from the others along the RW3-RW4 axes. Multiple regression models to predict relation between shape and ecological attributes indicate the strongest role of dissolved oxygen, stream velocity and abundance of predators in explaining variations in morphology across these populations. This is significant as a first study utilising the tools of morphometric analyses in Danio rerio and indicating the role of multiple (biotic and abiotic) selective forces in shaping phenotypic variations in morphology. [ABSTRACT FROM AUTHOR]

Selection for increased body weight at harvest in Nile tilapia ( Oreochromis niloticus ) was carried out for five generations from 1991 to 1996, as a part of the project Genetic Improvement of Farmed Tilapias (GIFT). The base population for selection was composed of a mixture of various three- and four-way cross individuals descending from four wild African strains and four farmed Asian strains. Methods for single pair mating, separate rearing of full-sib groups and individual tagging and pedigree recording were developed. The parents for a new generation were selected based on a selection index including their own age corrected-body weight at harvest as well as that of their full- and half-sibs. Across generations, a total of 512 males were mated in a nested mating design to 941 females to produce 81,429 tagged progenies. Of those, 56,633 progeny had their body weight recorded at harvest after grow-out testing in a diverse range of farming environments. Estimates of the within generation realized response to selection across farming environments were obtained as the difference between the least squares mean performance of offspring of selected parents and of offspring of parents with average values of the selection index. The average realized response to selection per generation was 13.6% (range 9.0 to 20.1%), resulting in an accumulated response over five generations of 88% relative to the base population. A genetic trend analysis based on BLUP breeding values estimated across generations after the termination of the project suggested an accumulated response of 67%. The genetic composition of the synthetic population also changed during selection. The proportion of ancestors from three of the wild African founder strains increased from 59.7 to 76.3%. The accumulated coefficient of inbreeding was 7.1%. After the termination of the GIFT project, selection was continued in the GIFT population. The population has also been used as a genetic source in a number of similar public and private selection programs. A status review of the presently recorded dissemination of the genetic material and methodology is presented. Statement of relevance The GIFT project showed that five generations of repeated selection based on testing of individually tagged and pedigreed individuals from a synthetic farmed population of Nile tilapia gradually increased the body weight at harvest. The total increase was 67–88%. Reports from several descending populations shows that the selection response has continued during > 10–15 additional generations. [ABSTRACT FROM AUTHOR]

Fasting and refeeding occur naturally in predators but this is largely ignored when dealing with farmed fish. Therefore, the effects of 3-week fasting and re-alimentation (2.5% of the individual body mass) were investigated using two genetically selected populations (F2 generation) of 250 g juvenile sea bass ( Dicentrarchus labrax L.). Blood osmolarity, gill and intestinal morphology and expression of the sodium pump (Na + , K + -ATPase, NKA) were studied on two phenotypes showing different degrees of body mass loss during food deprivation: one group losing body mass rapidly during fasting (F +) and the other one limiting body mass loss during the same period (F −). Blood osmotic pressure significantly decreases due to re-alimentation in both groups, but this is compensated in the F + group. In this group, gill ionocytes are smaller and less numerous, but a significantly higher NKA gene expression is noted in the gills in comparison to the F − individuals 48 and 72 h after re-alimentation, and also in the posterior intestine 72 h after re-alimentation. This most probably occurs to compensate for a higher salt intake during nutrient absorption in comparison to the F − group. Furthermore, refed F − fish absorb more lipids along the proximal anterior intestine, and take longer to digest than the F + group, and show enterocyte vacuolization in the posterior intestine. Therefore, the two selected populations have different postprandial digestive strategies: the F − fish optimize feed efficiency first at the cost of optimal hydromineral adjustment, while the F + group invests in osmoregulatory performance at the expense of digestive physiology. Statement of relevance Our paper is highly relevant to the general field of commercial aquaculture. There is an increasing number of research articles dealing with fasting and refeeding in commercial fish and how to improve fish nutrition based on these physiological data and genetic selection. [ABSTRACT FROM AUTHOR]