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Functional characteristics of species are of great importance for understanding their roles in ecosystems and can be used to detect long‐term chances in the environment. We evaluated temporal changes (1983–1985 and 2017–2019) in taxonomic and functional indices of the fish fauna in shallow areas of a tropical bay heavily impacted by anthropogenic activities in recent decades. The hypothesis that functional indices change over time as a result of environmental degradation was tested. Our results showed a significant decrease in species richness and abundance over time, and in functional richness, while others functional diversity indices (divergency, evenness, and originality) remained stable. Thirteen functional groups were detected, some of which contained only one species, raising concerns about the loss of ecosystem functions due to ongoing changes. We also observed an increase in beta diversity over time, which may be the result of a decrease in local richness without leading to regional extinctions. Turnover was the most important process in structuring the fish fauna at the evaluated time scale. The relative stability of the functional structure and the higher levels of turnover seem to be related to the dominance of functional groups, within which species replace each other according to their responses to environmental filters that select for specific functional traits. Incorporating functional diversity indices and beta diversity variations in the fish community helped to enhance the existing information about this coastal system by offering improved estimates of biological diversity through diverse approaches. The predominance of turnover identified in the preset study suggests a dynamic and fluctuating species composition within the habitat. In this sense, habitat preservation should prioritize the protection of diverse habitats to accommodate a broad spectrum of species. [ABSTRACT FROM AUTHOR]

Damming of large rivers has promoted well‐documented ecosystem changes that constitute critical threats to freshwater fish biodiversity. However, it is unclear how trait–environment relationships drive community assembly in older (>50 years) tropical river‐reservoir systems. We assessed physical features filtering functional traits (RLQ and fourth‐corner approaches) in seven tropical reservoirs along a major river, in southeastern Brazil, and correlated taxonomic and functional counterparts of local and beta diversity to assess niche‐based assembly processes under prevailing environmental conditions (null model approach). Lower littoral habitat availability (smaller area, volume, and riverine influence) favored species inhabiting open areas that feed on the bottom (mostly migratory species). Downstream position (lower elevation and inflow of water from the mainstem) allowed migrators to enter the reservoirs and promoted environmental heterogeneity, favoring detritivores, invertivores, and carnivorous generalists. Total blocking of the main channel excluded most migratory species from reservoirs at upstream reaches, whereas higher riverine influence and hydrological stability (larger area, volume, and water residence time) favored small‐sized sedentary species (omnivores and piscivores with parental care, mostly non‐native species) in the littoral zone. Correlations differing from null expectations for alpha diversity and nestedness revealed that niche‐based processes support species richness and loss under higher riverine influence and hydrological stability. Our study supports the importance of physical features to set functional spaces available for fish species, but random processes that boost taxonomic differences between reservoirs, largely related to non‐native species introductions, are the primary drivers of fish assemblage structure in tropical reservoirs long‐term disconnected from riverine dynamics. [ABSTRACT FROM AUTHOR]

The dynamics of fish assemblages in reservoirs depend on factors such as the morphometry of the catchment, habitat structure, and the uses of the reservoir. In the Paraíba do Sul (PSR) basin in southeastern Brazil, there are several types of reservoirs, some on the main channel, some are cascade reservoirs originated from a diversion of the waters of the PSR, and others are isolated reservoirs from tributaries. This study aimed to evaluate the influences of these three types of reservoirs on the taxonomic and functional distinctness of the fish assemblages. It was hypothesized that reservoirs on the main channel (more inflowing waters and habitat availability) have higher taxonomic and functional distinctness compared to cascade reservoirs, which in turn, have greater distinctness than isolated reservoirs. In addition, we expect assemblage structure to differ among these types of reservoirs because of the close relationship with local environmental conditions and habitat structure. Thirty measurements (26 quantitative and 4 categorical) from 34 fish species representing functional traits associated with locomotion, feeding, life strategy, and habitat use were taken. Fish assemblages differed among the three types of reservoirs, which was probably associated with different environmental and local habitat conditions. Higher taxonomic and functional distinctness were found for the isolated reservoirs, and lower for reservoirs on the main channel. This suggests that the fish fauna in this latter type of reservoir were probably composed of phylogenetically close and morphologically similar species. It is likely that limitation of the available resources induces fish to partition the available niches to coexist, favoring assemblages with species adapted to different functions. Our results demonstrate that assessing fish functional and taxonomic distinctness can be used to advance understanding of fish communities from reservoirs in Neotropical regions. [ABSTRACT FROM AUTHOR]

Shallow coastal habitats are ruled by fluctuating environmental conditions, which lead to shifts in fish communities. Functional groups of habitat use and trophic strategy were used to address the responses of fish composition and diversity, since comparisons of rich tropical systems are often complex through species-based approaches. We hypothesized that fish groups will have specific affinities in response to the prevailing environmental conditions, especially those reflecting the prevalence of oceanic or estuarine conditions, where guilds of habitat use would perform better as indicators. Despite the importance of other environmental factors (i.e. temperature and transparency), salinity was the key structuring factor irrespective of the coastal lagoon. Although harbouring the greatest biomass of piscivores, the harsh environmental conditions at Araruama lagoon were related to low diversity. A great number of indicator species, typically of marine affinity, was found at the Saquarema lagoon, probably due to the continuous and broad connection to the sea leading to the predominance of euhaline conditions. Despite the presence of non-native species (i.e. Oreochromis niloticus), the Maricá lagoon function as an important refuge for freshwater groups. Our results stressed the key role played by coastal lagoons of varied water conditions in supporting fish diversity at regional levels. [ABSTRACT FROM AUTHOR]

The distribution of species depends on the relationship with other species and the influence of abiotic factors, modulated by long‐term evolutionary and biogeographic processes. Polychaetes and fish are important components of the biota that inhabit estuarine systems, coexisting in various habitats, although the relationship between these groups and their responses to environmental variables is poorly understood. This study aimed to assess the concordance between fish and polychaete communities in three zones (inner, middle, and outer) of a tropical bay and to determine environmental influences on these communities. The raised hypothesis is that benthic fish is associated with polychaetes and that these taxonomic groups respond differently to environmental conditions. Environmental characteristics were the main drivers determining the occurrence of fish species and polychaetes families; however, no consistent relationship was observed between fish and polychaetes. Sediment granulometry seems to be an essential driver in determining polychaetes and fish distribution while turbidity and phosphorus were also important for fish. The three zones differed in both water physicochemical and sediment (nutrients and granulometry) variables, which determined their uses by different fish and polychaetes species. Only one fish species, the gerreid Eucinostomus argenteus showed a weak but significant association with the Goniadidae and Spionidae polychaetes, which may be associated with similar environmental preferences of both taxa. The lack of a consistent relationship between benthic fish and their likely invertebrate prey may be associated with the small spatial scale of this study and the early fish life stages. Most fish in shallow coastal areas are still in their early life, feeding mainly on polychaetes and other benthic macroinvertebrates, and as the area is shallow, planktonic organisms may be included in their diet, thus relieving predation pressure on benthic organisms. These findings are important to unveil relationships among different taxonomical groups and their environment. [ABSTRACT FROM AUTHOR]

A new approach for visual fish survey in reservoirs using underwater drones (remotely operated vehicle- ROV) is presented. The ROV was applied to identify abiotic gradients and to compare fish assemblages on the steep slopes in a tropical reservoir. The tested hypothesis is that fish are concentrated in the littoral zone due to the better physicochemical and habitat conditions, compared to deep and hypoxic layers. Twelve species were recorded (seven native, five exotic), with all species occurring in the littoral zone, seven species in the transition, and four in the profundal zone. A greater fish abundance and richness was found in the littoral zone corroborating the main hypothesis. The littoral zone was dominated by exotic cichlids (Cichla spp., Coptodon rendalli), while native catfish (Loricariichthys castaneus, Pimelodella lateristriga) occupied deeper areas. The fish distribution seems to be driven by local factors, such as oxygen availability and habitat structure. The preference for the littoral zone by alien cichlids may have led to the extirpation/decrease of native characids and induced catfishes to occupy deep habitats. Underwater drones can be a valuable tool for the simultaneous collection of abiotic/biotic data, especially in deep reservoirs with complex habitats, resulting in advances in the environmental monitoring. [ABSTRACT FROM AUTHOR]

Estuarine shallow waters have many habitats favouring the colonization and establishment of different fish species. Our study investigated the variability in the composition of these communities by examining beta diversity and evaluated the relationship between fish beta diversity and environmental heterogeneity, which can be dependent on the level of human alteration to which an ecosystem is exposed. Our goal is to provide insights not only on the biodiversity, but also to help develop effective conservation measures. We sampled fish and environmental variables (physicochemical water variables and sediment nutrients and granulometry) in three zones (inner, middle and outer) of Sepetiba Bay, in Southeastern Brazil. The aims of our study were to compare fish communities in the different zones by using beta diversity and to investigate the relationship between environmental heterogeneity and beta diversity. Habitat conditions varied considerably among the zones. Relationships between species and environmental conditions were species-specific, and a weak positive correlation between environmental heterogeneity and beta diversity was found. The highest beta diversity was detected in the inner bay zone, suggesting that relatively more urbanized areas had greater environmental heterogeneity and, thus, higher beta diversity. Our results serve as a 'caution' to reduce the urbanization effects on these environments that sometimes can increase habitat heterogeneity and species richness. The 'weak' relationship suggest that the ecosystems may have been in the 'early stages' of human influences and managers should take into account that anthropogenic impacts would reduce beta diversity because continued degradation would lead to natural habitat reduction. [ABSTRACT FROM AUTHOR]

The native fishes of the Neotropical region have been heavily impacted by the construction of reservoirs that block the rivers in different degrees. Small Hydroelectric Power Plants (SHPP) have been an alternative way to take advantage of small electricity production potential, with low cost. However, there is no basis in the belief that SHPP have less deleterious effects on river habitat than large hydropower plants. The aim of this study was to evaluate eventual changes in the ichthyofauna because of the influences of SHPP in the middle reaches of a tropical river in south-eastern Brazil. The raised hypothesis is that SHPP change the ichthyofauna composition and increase the taxonomic and functional similarities (homogenization). Fish collections were carried out quarterly at six locations along a 20 km stretch of the Paraíba do Sul River, before and after the construction of the SHPP. The fish community structure changed between the two periods, with a decrease in the fish numerical abundance, whereas the species richness did not change. Sensitive species with specialized feeding habits (namely, Hartia loricariformis, Steindachineridium parahybae, Hypomasticus mormirops, Characidium alipioi, Chyphocharax gilbert, Corydoras nattereri and Pogonopoma parahybae) occurred only before the SHPP, being replaced by several species of Characiformes, among them four of genus Astyanax (namely, A. giton, A. hastatus, A. taeniatus, and A. intemedium) that are tolerant and omnivores; however, most of functional traits were maintained. The taxonomic dissimilarity increased significantly, whereas the functional dissimilarity did not differ between the two periods. The hypothesis of ichthyofauna homogenization was not confirmed in this study, probably because of the short time period since the SHPP construction. [ABSTRACT FROM AUTHOR]

We investigate the effects of spatial changes in environmental conditions and anthropogenic influences on larval fish communities in two tropical estuaries with varying levels of human impact. Our findings revealed a distinct structure of larval fish assemblages between the two estuaries located in northeastern Brazil, and we observed that eutrophication, characterized by high concentrations of nutrients, had adverse effects on the abundance and richness of larval fish assemblages. Additionally, we observed that a decrease in rainfall had an impact on larval fish assemblages, particularly during the dry season, when intermittent upstream rivers lead to changes in salinity and species composition within the estuaries. This study contributed to evaluating the community descriptors of two tropical estuaries under different levels of human influence, providing insights into the vulnerability of larval fish assemblages to climate change, specifically in relation to human influences and hypersalinity and the effects of marinization in shallow tropical estuaries in this region. [Display omitted] • Eutrophication had adverse effects on the abundance and richness of larval fish assemblages. • Decrease in rainfall had an impact on larval fish assemblages. • Differences in larval fish assemblages occur due to variations in habitat quality. • Nutrient pollution can have an inverse effect on the richness and abundance of species. [ABSTRACT FROM AUTHOR]

We assessed inter-annual changes in fish assemblages of a tropical bay which experienced a heavily industrialized process in the last decades. A highly significant difference in community structure among the bay zones, and a decrease in fish richness and abundance over time were found. Changes in fish richness and abundance between the two first (1987–1988 and 1993–1995) and the two latter time periods (1998–2001 and 2012–2013) were sharpest in the inner bay zone, the most impacted bay area, and in the middle zone, whereas the outer zone remained comparatively stable over time. These changes coincided with increased metal pollution (mainly, Zn and Cd) in the bay and with the enlargement of the Sepetiba Port. Spatial changes in the fish community structure among the bay zones were related to differences in salinity, transparency and depth with this latter variable acting as a buffer stabilizing temporal community changes. [ABSTRACT FROM AUTHOR]

We developed a multimetric index for assessing ecological conditions in rocky reefs areas to evaluate thermal and urban influences on fish community. Eight metrics were selected to assess thermal influence: (1) total number of species; (2) number of water column species; (3) number of transient species; (4) density of individuals with low resilience; (5) density of omnivores; (6) density of carnivores; (7) number of cryptic species; (8) density of herbivores. For urban influence, six metrics were selected: (1) total density; (2) ratio between the number of rare species and the total number of species; (3) density of individuals with heavy fishing pressure; (4) number of resident species; (5) number of cryptic species; (6) density of herbivores. This preliminary index succeed in discriminating control/impacted sites and proved to be an important tool to assess impacts that alter fish community and have potential to be used in tropical rock reef coastal areas. [ABSTRACT FROM AUTHOR]

Abstract: This study analyzed the factors structuring demersal fish community in a tropical bay in southeastern Brazil. The results were used to quantify the partitioning of ecological variation among the environmental, spatial and temporal components molding the fish community. Three bay zones (inner, middle and outer) were defined according to depth and salinity gradient. Monthly samplings were conducted by bottom trawl tows during daylight hours, between October 1998 and September 1999. In each zone, three replicate samples were taken. Ninety-three fish species from 73 genera and 37 families were recorded in the 108 samples. Two demersal fish assemblages were evidenced, one in the inner and the other in the outer zone. These assemblages were characterized by changes in species composition and relative abundance. Depth, followed by transparency and salinity, influenced spatial pattern of fish assemblages. The largest part of the explained variation occurred as a result of the spatial structure of environmental variables, which means that both species and environmental variables presented similar spatial structure. The spatial effect, not the seasonal, explained the highest part of species variations. The amount of unexplained variation was relatively high (76%), even assuming that part of it is due to nondeterministic fluctuation, which could be due to local effects of unmeasured (biotic and abiotic) controlling variables. Knowing the relative importance of these factors can be of decisive importance when applying casual hypotheses in the framework of some precise ecological theory and should facilitate management, planning, and usage of bay resources. [Copyright &y& Elsevier]

Functional diversity can be used to help understanding the processes shaping biological communities and the effects of human disturbances on the ecosystem's services. Untangling these biological processes is crucial to apply effective policies aiming the biodiversity conservation. Temporal changes (1983–1985, 1999–2001 and 2017–2019) in five functional indices (functional richness, divergence, evenness, specialization and originality) of the fish communities in two zones (inner and outer) of shallow areas in a tropical bay heavily human-impacted in recent decades were evaluated. The tested hypothesis was that functional indices decrease over time, because of the environmental degradation. A substantial decrease in species richness and abundance in the more recent periods (1999–2002 and 2017–2019) compared to 1983–1985 was observed. However, the functional structure remained relatively stable, with the exception of functional richness that showed a significant decrease over time. The apparent stability in the other functional indices may be due to the presence of dominant and functionally redundant species over time that compensates for the loss of species while maintaining similar functions. It was also discovered that decreases in fish richness in shallow bay areas result in losses in functional richness, with resident fish and benthivorous species being the most affected by environmental degradation. By employing a comprehensive approach that integrates the use of functional indices and taxonomic diversity to assess temporal changes in the fish community, it provides a broader understanding of ecological processes. Such insights could prove invaluable in guiding the implementation of conservation strategies. • Changes over three decades in fish functional indices in a tropical bay was evaluated. • A substantial temporal decrease in species richness and abundance was observed. • Functional structure remained stable, but the functional richness decreased over time. • Stability in other functional indices was due to dominant and functionally redundant species. • Redundant species compensates losses of species while maintaining similar functions. [ABSTRACT FROM AUTHOR]

Abstract: Fish communities and habitat structures were evaluated by underwater visual censuses a rocky location impacted by thermal discharge (I) and at two control locations, one in a Sargassum bed (C1) and the other in a rocky shore with higher structural complexity (C2). Habitat indicators and fish communities exhibited significant differences between the impacted and control locations, with the impacted one showing a significant decrease in fish species richness and diversity, as well as a decrease in benthic cover. At the I location, only 13 fish species were described, and the average water temperature was 32±0.4°C, compared with 44 species at C1 (25.9±0.3°C) and 33 species at C2 (24.6±0.2°C). Significant differences in fish communities among locations were found by ANOSIM with Eucinostomus argenteus, Mugil sp. and Haemulon steindachneri typical of location I, while Abudefduf saxatilis, Stegastes fuscus and Malacoctenus delalandi were typical of the control locations. Our study shows that thermal pollution alters benthic cover and influences fish assemblages by altering composition and decreasing richness. [Copyright &y& Elsevier]

The spatial structure of the fish diversity and site-scale and landscape-scale environmental effects were investigated across hierarchical levels in tropical coastal ecosystems. Total diversity (γ) was hierarchically partitioned into α and β components using both the additive and multiplicative methods. A model selection based on the AICc was applied to generalized linear mixed models relating diversity measures to environmental variables and including random effects for hierarchical levels and season. Short-term seasonal effects were negligible. Spatial effects were more relevant at the site level and negligible at the subregion level, due to the high spatial heterogeneity and the natural pooling of ecosystems, respectively. Site-scale environmental effects were more relevant at the subregion level, with eutrophic conditions (continental influence) favoring the species richness (α and γ) and higher absence of species (βA) in oligotrophic conditions (marine influence). At the system level, the positive effect of the distance from the ocean on γ and higher βA in oligotrophic conditions reinforced the positive continental influence on fish diversity. Environmental homogenization processes were most likely associated with the negative effect of the pasture cover on α at the system level, and γ and βA at the site level. The negative effect of the forest cover on the later diversity measure evidenced its relevance to maintain richer but more similar assemblages, whereas the positive continental influence was most likely due to the loss of stenohaline marine species. This study evidenced that disentangling spatial, land use, and marine vs. continental effects on diversity components is critical to understand the primary determinants of the fish diversity in tropical coastal ecosystems. • Spatial and environmental effects were critical for coastal fish diversity. • At the site level, diversity was primarily associated with land use effects. • Multi-scale continental influences affected positively fish diversity within systems. • Diversity was primarily driven by site-scale environmental effects within sub-regions. • The α and additive β components were the major determinants of changes on γ diversity. [ABSTRACT FROM AUTHOR]

We investigated the effects of local- and landscape-scale environmental variables and spatial structure at three hierarchical levels (i.e. type of system, individual systems, and zones within each system) on the fish species composition and abundance in bays and coastal lagoons in southeastern Brazil. The effects were assessed at the assemblage level, and between and within habitat use groups. Exclusive and shared effects of environmental, hierarchical, and spatial variable sets were quantified by variation partitioning, and individual environmental effects were assessed by partial canonical correspondence analyses. The hierarchical and spatial structures were more relevant for habitat use groups less widespread due to the lower dependence on estuarine areas, and influenced primarily the landscape-scale environmental differences between individual systems. At the assemblage level, the exclusively environmental effects were primarily indicative of the marine (e.g. , higher depth, pH, and transparency) versus continental (e.g. , greater distance from the ocean and mangrove cover) influence. Estuarine, marine migrant, and marine straggler species were more widespread across these gradients, but the former species were primarily associated with greater mangrove cover and the marine stragglers with a higher marine influence. Semi-diadromous and freshwater species were less associated with greater mangrove cover and primarily restricted to coastal lagoons. The different multi-scale environmental effects within each group reinforced the relevance of intra- and inter-specific differences in environmental tolerances and requirements, and evidenced the relevance of the connectivity between alternative habitats in maintaining the structure of fish assemblages. Disentangling multilevel spatial and environmental effects, this study evidenced the critical roles of the maintenance of the environmental heterogeneity in nearby estuarine habitats for nearshore fish assemblages in different types of tropical semi-enclosed estuarine ecosystems. • Hierarchical, spatial, and environmental effects were detected for coastal fish. • Assemblage variation was strongly related to the hierarchical or spatial structure. • Landscape-scale environmental effects explained most of the assemblage variation. • Species more dependent on estuaries were related to wider environmental gradients. • Marine or continental effects were prevalent for less estuarine-dependent species. [ABSTRACT FROM AUTHOR]