1. Developing and verifying automatic detection of active pulmonary tuberculosis from multi-slice spiral CT images based on deep learning
- Author
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Stefan Jaeger, Yu Zhang, Yun Wang, Ping Wang, Xiao-Ping Yin, Fleming Y M Lure, Lu-Yao Ma, Lin Guo, Lingjun Qian, Xu Pei, and Xiaowen Ke
- Subjects
Adult ,Male ,medicine.medical_specialty ,Adolescent ,020205 medical informatics ,Image processing ,02 engineering and technology ,030218 nuclear medicine & medical imaging ,Young Adult ,03 medical and health sciences ,Deep Learning ,0302 clinical medicine ,Pulmonary tuberculosis ,0202 electrical engineering, electronic engineering, information engineering ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Segmentation ,Electrical and Electronic Engineering ,Child ,Lung ,Tuberculosis, Pulmonary ,Instrumentation ,Aged ,Aged, 80 and over ,Radiation ,business.industry ,Deep learning ,MULTI-SLICE SPIRAL CT ,Gold standard (test) ,Middle Aged ,Condensed Matter Physics ,Spiral computed tomography ,Child, Preschool ,Radiographic Image Interpretation, Computer-Assisted ,Female ,Artificial intelligence ,Radiology ,Differential diagnosis ,Tomography, X-Ray Computed ,business ,Algorithms - Abstract
OBJECTIVE: Diagnosis of tuberculosis (TB) in multi-slice spiral computed tomography (CT) images is a difficult task in many TB prevalent locations in which experienced radiologists are lacking. To address this difficulty, we develop an automated detection system based on artificial intelligence (AI) in this study to simplify the diagnostic process of active tuberculosis (ATB) and improve the diagnostic accuracy using CT images. DATA: A CT image dataset of 846 patients is retrospectively collected from a large teaching hospital. The gold standard for ATB patients is sputum smear, and the gold standard for normal and pneumonia patients is the CT report result. The dataset is divided into independent training and testing data subsets. The training data contains 337 ATB, 110 pneumonia, and 120 normal cases, while the testing data contains 139 ATB, 40 pneumonia, and 100 normal cases, respectively. METHODS: A U-Net deep learning algorithm was applied for automatic detection and segmentation of ATB lesions. Image processing methods are then applied to CT layers diagnosed as ATB lesions by U-Net, which can detect potentially misdiagnosed layers, and can turn 2D ATB lesions into 3D lesions based on consecutive U-Net annotations. Finally, independent test data is used to evaluate the performance of the developed AI tool. RESULTS: For an independent test, the AI tool yields an AUC value of 0.980. Accuracy, sensitivity, specificity, positive predictive value, and negative predictive value are 0.968, 0.964, 0.971, 0.971, and 0.964, respectively, which shows that the AI tool performs well for detection of ATB and differential diagnosis of non-ATB (i.e. pneumonia and normal cases). CONCLUSION: An AI tool for automatic detection of ATB in chest CT is successfully developed in this study. The AI tool can accurately detect ATB patients, and distinguish between ATB and non- ATB cases, which simplifies the diagnosis process and lays a solid foundation for the next step of AI in CT diagnosis of ATB in clinical application.
- Published
- 2020
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