1. Oral colonisation by antimicrobial-resistant Gram-negative bacteria among long-term care facility residents: prevalence, risk factors, and molecular epidemiology
- Author
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Seiya Kashiyama, Mineka Yoshikawa, Junzo Hisatsune, Kazuhiro Tsuga, Toshinori Hara, Mi Nguyen-Tra Le, Hiroki Ohge, Motoyuki Sugai, Shizuo Kayama, Keiko Tsuruda, and Makoto Onodera
- Subjects
0301 basic medicine ,Male ,Acinetobacter baumannii ,Drug resistance ,medicine.disease_cause ,Medical microbiology ,Japan ,Acinetobacter ursingii ,Drug Resistance, Multiple, Bacterial ,Prevalence ,Medicine ,Pharmacology (medical) ,Phylogeny ,Aged, 80 and over ,Molecular Epidemiology ,biology ,Middle Aged ,Anti-Bacterial Agents ,Risk factor analysis ,Infectious Diseases ,Pseudomonas aeruginosa ,Female ,Microbiology (medical) ,medicine.medical_specialty ,030106 microbiology ,Microbial Sensitivity Tests ,Microbiology ,lcsh:Infectious and parasitic diseases ,Extended-spectrum ß-lactamases ,Carbapenemase ,03 medical and health sciences ,Antibiotic resistance ,Antimicrobial resistant bacteria ,Gram-Negative Bacteria ,Escherichia coli ,Humans ,lcsh:RC109-216 ,Aged ,Mouth ,Molecular epidemiology ,Whole Genome Sequencing ,business.industry ,Research ,Public Health, Environmental and Occupational Health ,Acinetobacter ,biology.organism_classification ,Long-Term Care ,030104 developmental biology ,Oral colonisation ,Pharynx ,business ,Gram-Negative Bacterial Infections ,Genome, Bacterial - Abstract
Background For residents of long-term care facilities (LTCFs), antimicrobial-resistant bacteria (ARB) are a risk factor, yet their oral colonisation, potentially leading to aspiration pneumonia, remains unclear. This study was undertaken to survey the prevalence, phenotypic characteristics, and molecular epidemiology of antimicrobial-resistant Gram-negative bacteria in the oral cavity of LTCF residents, and to analyse the risk factors for such carriers. Methods This study involved 98 residents of a LTCF in Hiroshima City, Japan, aged between 55 and 101 years. Oropharyngeal swabs were collected and plated on screening media for ESBL-producing and carbapenem-resistant bacteria; isolates were identified and tested for antibiotic susceptibility; biofilm formation was tested in vitro; identification of epidemic clones were pre-determined by PCR; resistance genes, sequence types, and whole-genome comparison of strains were conducted using draft genome sequences. Demographic data and clinical characterisations were collected and risk factors analysed. Results Fifty-four strains from 38% of the residents grew on screening media and comprised predominantly of Acinetobacter spp. (35%), Enterobacteriaceae spp. (22%), and Pseudomonas spp. (19%). All Escherichia coli isolates carried CTX-M-9 group and belonged to the phylogroup B2, O25:H4 ST131 fimH30 lineage. Six Acinetobacter baumannii isolates presented identical molecular characteristics and revealed more biofilm production than the others, strongly suggesting their clonal lineage. One Acinetobacter ursingii isolate displayed extensive resistance to various ß-lactams due to multiple acquired resistance genes. One Pseudomonas aeruginosa isolate showed exceptional resistance to all ß-lactams including carbapenems, aminoglycosides, and a new quinolone, showing a multidrug-resistant Pseudomonas aeruginosa (MDRP) phenotype and remarkable biofilm formation. Genome sequence analysis revealed this isolate was the blaIMP-1-positive clone ST235 in Japan. Strokes (cerebral infarction or cerebral haemorrhage) and percutaneous endoscopic gastrostomy tubes were recognised as risk factors for oral colonisation by ARB in the LTCF residents. Conclusions ARB, as defined by growth on screening agar plates, which carried mobile resistance genes or elements or conferred high biofilm formation, were already prevalent in the oral cavity of LTCF residents. Health-care workers involved in oral care should be aware of antimicrobial resistance and pay special attention to transmission prevention and infection control measures to diminish ARB or mobile resistance elements dissemination in LTCFs.
- Published
- 2020
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