15 results on '"Stępień, Ewa Ł."'
Search Results
2. miRNA Signature of Urine Extracellular Vesicles Shows the Involvement of Inflammatory and Apoptotic Processes in Diabetic Chronic Kidney Disease.
- Author
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Zapała B, Kamińska A, Piwowar M, Paziewska A, Gala-Błądzińska A, and Stępień EŁ
- Subjects
- Humans, Diabetic Nephropathies, Diabetes Mellitus, Type 2, MicroRNAs genetics, Renal Insufficiency, Chronic, Extracellular Vesicles metabolism
- Abstract
Background: The aim of this study was to investigate the role of urine-derived extracellular vesicles (uEVs) in diabetic kidney disease (DKD) in patients diagnosed with type 2 diabetes mellitus (T2DM)., Methods: UEVs were characterized by size distribution and microRNA content by next-generation small RNA sequencing and quantitative reverse transcription PCR., Results: A subset of sixteen miRNAs enriched in T2DM patients with DKD, including hsa-miR-514a-5p, hsa-miR‑451a, hsa-miR-126-3p, hsa-miR-214, or hsa-miR‑503 was identified. Eight miRNAs as hsa-miR-21-3p, hsa-miR-4792, hsa-miR‑375, hsa-miR-1268a, hsa-miR-501-5p, or hsa-miR-582 were downregulated. Prediction of potential target genes and pathway enrichment analysis of the Kyoto Encyclopedia of Genes and Genomes (KEGG) confirmed possible functions related to cellular processes such as apoptosis, inflammation, and tissue remodeling, that promote diabetic complications, such as DKD. Among them, hsa-miR-375, hsa-miR-503, and hsa-miR-451a make important contribution. Additionally, downregulated hsa-miR-582-5p has not been reported so far in any diabetes-related pathways., Conclusions: This study revealed the most significant miRNAs in uEVs of patients with T2DM. However, as this is a bioinformatic prediction that we performed based on the putative targets of the identified miRNAs. Thus, further in vitro functional studies are needed to confirm our findings. Knowing the fact that EVs are crucial in transferring miRNAs, there is a great need toto discover their involvement in the pathomechanism of T2DM-related kidney disease., (© 2023. The Author(s).)
- Published
- 2023
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3. Study of the influence of hyperglycemia on the abundance of amino acids, fatty acids, and selected lipids in extracellular vesicles using TOF-SIMS.
- Author
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Marzec ME, Rząca C, Moskal P, and Stępień EŁ
- Subjects
- Amino Acids, Fatty Acids, Humans, Spectrometry, Mass, Secondary Ion methods, Cell-Derived Microparticles, Extracellular Vesicles, Hyperglycemia
- Abstract
Time-of-flight secondary ion mass spectrometry (TOF-SIMS) with the Bi
3 liquid metal ion gun was used to investigate the content of lipids and amino acids (AAs) in extracellular vesicles (EVs). We induced metabolic changes in human pancreatic β-cells by stimulation with high glucose concentrations (35 mM) and tested the hypothesis of hyperglycemia (HG) has a detrimental effect on lipids and AAs in released EV subpopulations: ectosomes and exosomes. As a result of HG treatment, selected fatty acids (FAs) such as arachidonic, myristic and palmitic acids, changed their abundance in ectosomes and exosomes. Also, intensities of the characteristic peaks for cholesterol (m/z 95.09; 147.07; 161.11; 369.45) along with the molecular ion m/z 386.37 [C+ liquid metal ion gun was used to investigate the content of lipids and amino acids (AAs) in extracellular vesicles (EVs). We induced metabolic changes in human pancreatic β-cells by stimulation with high glucose concentrations (35 mM) and tested the hypothesis of hyperglycemia (HG) has a detrimental effect on lipids and AAs in released EV subpopulations: ectosomes and exosomes. As a result of HG treatment, selected fatty acids (FAs) such as arachidonic, myristic and palmitic acids, changed their abundance in ectosomes and exosomes. Also, intensities of the characteristic peaks for cholesterol (m/z 95.09; 147.07; 161.11; 369.45) along with the molecular ion m/z 386.37 [C27 H46 O+ ] under HG conditions, both for ectosomes and exosomes, have changed significantly. Comparative analysis of HG EVs and normoglycemic (NG) ones showed statistically significant differences in the signal intensities of four AAs: valine (m/z 72.08 and 83.05), isoleucine (m/z 86.10), phenylalanine (m/z 120.08 and 132.05) and tyrosine (m/z 107.05 and 136.09). We confirmed that ToF-SIMS is a useful technique to study selected AAs and lipid profiles in various EV subpopulations. Our study is the first demonstration of changes in FAs and AAs in exosomes and ectosomes derived from β-cells under the influence of HG., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2022
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4. Large extracellular vesicles do not mitigate the harmful effect of hyperglycemia on endothelial cell mobility.
- Author
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Drożdż A, Kołodziej T, Wróbel S, Misztal K, Targosz-Korecka M, Drab M, Jach R, Rząca C, Surman M, Przybyło M, Rajfur Z, and Stępień EŁ
- Subjects
- Humans, Human Umbilical Vein Endothelial Cells, Cell Movement, Cell Communication, Extracellular Vesicles metabolism, Hyperglycemia metabolism
- Abstract
Extracellular vesicles, especially the larger fraction (LEVs - large extracellular vesicles), are believed to be an important means of intercellular communication. Earlier studies on LEVs have shown their healing properties, especially in the vascular cells of diabetic patients. Uptake of LEVs by endothelial cells and internalization of their cargo have also been demonstrated. Endothelial cells change their properties under hyperglycemic conditions (HGC), which reduces their activity and is the cause of endothelial dysfunction. The aim of our study was to investigate how human umbilical vein endothelial cells (HUVECs) change their biological properties: shape, mobility, cell surface stiffness, as well as describe the activation of metabolic pathways after exposure to the harmful effects of HGC and the administration of LEVs released by endothelial cells. We obtained LEVs from HUVEC cultures in HGC and normoglycemia (NGC) using the filtration and ultracentrifugation methods. We assessed the size of LEVs and the presence of biomarkers such as phosphatidylserine, CD63, beta-actin and HSP70. We analyzed the LEVs uptake efficiency by HUVECs, HUVEC shape, actin cytoskeleton remodeling, surface stiffness and finally gene expression by mRNA analysis. Under HGC conditions, HUVECs were larger and had a stiffened surface and a strengthened actin cortex compared to cells under NGC condition. HGC also altered the activation of metabolic pathways, especially those related to intracellular transport, metabolism, and organization of cellular components. The most interesting observation in our study is that LEVs did not restore cell motility disturbed by HGC. Although, LEVs were not able to reverse this deleterious effect of HGC, they activated transcription of genes involved in protein synthesis and vesicle trafficking in HUVECs., (Copyright © 2022 The Authors. Published by Elsevier GmbH.. All rights reserved.)
- Published
- 2022
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5. Raman spectroscopy of urinary extracellular vesicles to stratify patients with chronic kidney disease in type 2 diabetes.
- Author
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Kamińska A, Roman M, Wróbel A, Gala-Błądzińska A, Małecki MT Prof, Paluszkiewicz C, and Stępień EŁ Prof
- Subjects
- Biomarkers metabolism, Humans, Spectrum Analysis, Raman, Ultracentrifugation, Diabetes Mellitus, Type 2 complications, Diabetes Mellitus, Type 2 metabolism, Extracellular Vesicles metabolism, Renal Insufficiency, Chronic diagnosis, Renal Insufficiency, Chronic metabolism
- Abstract
In this study, we verified the hypothesis that Raman signature of urinary extracellular vesicles (UEVs) can be used to stratify patients with diabetes at various stages of chronic kidney disease (CKD). Patients with type 2 diabetes diagnosed with different stages of CKD and healthy subjects were enrolled in the study. UEVs were isolated using low-vacuum filtration followed by ultracentrifugation. Correlation analysis, multiple linear regression and principal component analysis were used to find differences between spectral fingerprints of UEVs derived from both groups of patients. Electron microscopy and nanoparticle tracking analysis were applied to characterize the size and morphology of UEVs. We observed significant correlations between selected Raman bands measured for UEVs and clinical parameters. We found significant differences in the area under the specific bands originating mainly from proteins and lipids between the study groups. Based on the tryptophan and amide III bands, we were able to predict the estimated glomerular filtration rate (eGFR). Principal component analysis, partial least squares regression (PLSR) and correlation analysis of the UEV Raman spectra supported the results obtained from the direct analysis of Raman spectra. Our analysis revealed that PLSR and a regression model including tryptophan and amide III bands allows to estimate the value of eGFR., (Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2022
- Full Text
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6. Design and Optimization of a Biosensor Surface Functionalization to Effectively Capture Urinary Extracellular Vesicles.
- Author
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Kamińska A, Marzec ME, and Stępień EŁ
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- Humans, Surface Properties, Silicon chemistry, Antigens, Surface metabolism, Microscopy, Atomic Force, Milk Proteins chemistry, Extracellular Vesicles chemistry, Extracellular Vesicles metabolism, Biosensing Techniques methods, Silanes chemistry
- Abstract
For this study, we tested and optimized silicon surface functionalization procedures for capturing urinary extracellular vesicles (uEVs). The influence of the silane type (APTES or GOPS) and protein concentration on the efficiency of uEVs binding was investigated. Human lactadherin protein (LACT) was used to capture uEVs. We applied surface characterization techniques, including ellipsometry, atomic force microscopy, and time-of-flight secondary ion mass spectrometry, to observe changes in the biosensor surface after each functionalization step. uEVs were purified by a low-vacuum filtration method and concentrated by ultracentrifugation. The physical parameters of uEVs after the isolation procedure, such as morphology and size distribution, were determined using transmission electron microscopy and tunable resistive pulse sensing methods. We observed a gradual growth of the molecular layer after subsequent stages of modification of the silicon surface. The ToF-SIMS results showed no changes in the mean intensities for the characteristic peaks of amino acids and lipids in positive and negative polarization, in terms of the surface-modifying silane (APTES or GOPS) used. The most optimal concentration of LACT for the tested system was 25 µg/mL.
- Published
- 2021
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7. Raman spectral signatures of urinary extracellular vesicles from diabetic patients and hyperglycemic endothelial cells as potential biomarkers in diabetes.
- Author
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Roman M, Kamińska A, Drożdż A, Platt M, Kuźniewski M, Małecki MT, Kwiatek WM, Paluszkiewicz C, and Stępień EŁ
- Subjects
- Diabetes Mellitus, Type 2 urine, Endothelial Cells chemistry, Extracellular Vesicles chemistry, Female, Human Umbilical Vein Endothelial Cells, Humans, Hyperglycemia urine, Male, Spectrum Analysis, Raman methods, Urinalysis methods, Urine chemistry, Diabetes Mellitus, Type 2 diagnosis, Endothelial Cells pathology, Extracellular Vesicles pathology, Hyperglycemia diagnosis
- Abstract
Raman spectroscopy was applied to the measurement of urinary and in vitro endothelium-derived extracellular vesicles (EVs) isolated by hydrostatic filtration dialysis (HFD) method. Raman spectra obtained for urinary EVs (UEVs) showed distinct differences in the fingerprint region. In contrast, average Raman spectra of endothelium-derived EVs samples were almost identical. Cluster Analysis of UEVs significantly discriminated diabetic samples from control, moreover endothelium-derived EVs revealed stronger similarity between long hyperglycemia and normoglycemia samples compared to short hyperglycemia. Results obtained from Partial Least Squares analysis corresponded well with integral intensities of selected bands. Our proof-of-concept approach demonstrates the potential for Raman spectroscopy to be used both for identification of EVs molecular signatures in urine samples from patients with type 2 diabetes mellitus and good glycemic control and unsatisfactory glycemic control as well as for in vitro hyperglycemic model. This noninvasive technique may be useful in identifying new biomarkers of diabetes and renal complications., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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8. Lactadherin: An unappreciated haemostasis regulator and potential therapeutic agent.
- Author
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Kamińska A, Enguita FJ, and Stępień EŁ
- Subjects
- Animals, Anticoagulants pharmacology, Antigens, Surface chemistry, Antigens, Surface pharmacology, Binding Sites, Blood Platelets drug effects, Extracellular Vesicles drug effects, Humans, Milk Proteins chemistry, Milk Proteins pharmacology, Models, Molecular, Protein Conformation, Signal Transduction, Structure-Activity Relationship, Antigens, Surface metabolism, Blood Platelets metabolism, Extracellular Vesicles metabolism, Hemostasis drug effects, Milk Proteins metabolism, Phosphatidylserines metabolism, Platelet Activation drug effects
- Abstract
Lactadherin is a small (53-66kDa) multifunctional glycoprotein belonging to the secreted extracellular matrix protein family. It has a multi-domain structure and is involved in many biological and physiological processes, including phagocytosis, angiogenesis, atherosclerosis, tissue remodeling, and haemostasis regulation. Lactadherin binds phosphatidylserine (PS)-enriched cell surfaces in a receptor-independent manner. Interaction between lactadherin and PS is crucial for regulation of blood coagulation processes. This review summarizes recent knowledge on the possible role of lactadherin in haemostasis control, emphasizing the great significance of the interaction between lactadherin and PS expressed on activated platelets and extracellular vesicles. The possible role of lactadherin as a therapeutic target and biomarker is also discussed., (Copyright © 2017 Elsevier Inc. All rights reserved.)
- Published
- 2018
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9. Urinary Extracellular Vesicles: Potential Biomarkers of Renal Function in Diabetic Patients.
- Author
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Kamińska A, Platt M, Kasprzyk J, Kuśnierz-Cabala B, Gala-Błądzińska A, Woźnicka O, Jany BR, Krok F, Piekoszewski W, Kuźniewski M, and Stępień EŁ
- Subjects
- Aged, Biomarkers urine, Diabetes Mellitus, Type 2 urine, Diabetic Nephropathies physiopathology, Diabetic Nephropathies urine, Female, Glomerular Filtration Rate physiology, Humans, Male, Middle Aged, Diabetes Mellitus, Type 2 physiopathology, Diabetic Nephropathies diagnosis, Extracellular Vesicles, Kidney physiopathology
- Abstract
The aim of this study was to check the relationship between the density of urinary EVs, their size distribution, and the progress of early renal damage in type 2 diabetic patients (DMt2). Patients were enrolled to this study, and glycated hemoglobin (HbA1c) below 7% was a threshold for properly controlled diabetic patients (CD) and poorly controlled diabetic patients (UD). Patients were further divided into two groups: diabetic patients without renal failure (NRF) and with renal failure (RF) according to the Glomerular Filtration Rate. Density and diameter of EVs were determined by Tunable Resistive Pulse Sensing. Additionally, EVs were visualized by means of Transmission and Environmental Scanning Electron Microscopy. Nano-liquid chromatography coupled offline with mass spectrometry (MALDI-TOF-MS/MS) was applied for proteomic analysis. RF had reduced density of EVs compared to NRF. The size distribution study showed that CD had larger EVs (mode) than UD (115 versus 109 nm; p < 0.05); nevertheless the mean EVs diameter was smaller in controls than in the CD group (123 versus 134 nm; p < 0.05). It was demonstrated that EVs are abundant in urine. Albumin, uromodulin, and number of unique proteins related to cell stress and secretion were detected in the EVs fraction. Density and size of urinary EVs reflect deteriorated renal function and can be considered as potential renal damage biomarkers., Competing Interests: The authors declare that they have no competing interests.
- Published
- 2016
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10. Using a lactadherin-immobilized silicon surface for capturing and monitoring plasma microvesicles as a foundation for diagnostic device development
- Author
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Kamińska, Agnieszka, Gajos, Katarzyna, Woźnicka, Olga, Dłubacz, Anna, Marzec, Magdalena E., Budkowski, Andrzej, and Stępień, Ewa Ł.
- Published
- 2020
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11. Radiovesicolomics-new approach in medical imaging.
- Author
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Stępień, Ewa Ł., Rząca, Carina, and Moskal, Paweł
- Subjects
SINGLE-photon emission computed tomography ,DIAGNOSTIC imaging ,POSITRON emission tomography ,EXTRACELLULAR vesicles - Abstract
This review introduce extracellular vesicles (EVs) to a molecular imaging field. The idea of modern analyses based on the use of omics studies, using high-throughput methods to characterize the molecular content of a single biological system, vesicolomics seems to be the new approach to collect molecular data about EV content, to find novel biomarkers or therapeutic targets. The use of various imaging techniques, including those based on radionuclides as positron emission tomography (PET) or single photon emission computed tomography (SPECT), combining molecular data on EVs, opens up the new space for radiovesicolomics--a new approach to be used in theranostics. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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12. Novel biomarker and drug delivery systems for theranostics – extracellular vesicles.
- Author
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Stępień, Ewa Ł., Rząca, Carina, and Moskal, Paweł
- Subjects
- *
DRUG delivery systems , *EXTRACELLULAR vesicles , *COMPANION diagnostics , *POSITRON emission tomography , *BIOMARKERS - Abstract
Extracellular vesicles (EVs) are nano- and micro-sized double-layered membrane entities derived from most cell types and released into biological fluids. Biological properties (cell-uptake, biocompatibility), and chemical (composition, structure) or physical (size, density) characteristics make EVs a good candidate for drug delivery systems (DDS). Recent advances in the field of EVs (e.g., scaling-up production, purification) and developments of new imaging methods (total-body positron emission tomography [PET]) revealed benefits of radiolabeled EVs in diagnostic and interventional medicine as a potential DDs in theranostics. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
13. Raman spectral signatures of urinary extracellular vesicles from diabetic patients and hyperglycemic endothelial cells as potential biomarkers in diabetes.
- Author
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Roman, Maciej, Kamińska, Agnieszka, Drożdż, Anna, Platt, Mark, Kuźniewski, Marek, Małecki, Maciej T., Kwiatek, Wojciech M., Paluszkiewicz, Czesława, and Stępień, Ewa Ł.
- Subjects
GLYCEMIC index ,PARTIAL least squares regression ,ENDOTHELIAL cells ,RAMAN spectroscopy technique ,TYPE 2 diabetes ,ANALYTICAL chemistry - Abstract
Raman spectroscopy was applied to the measurement of urinary and in vitro endothelium-derived extracellular vesicles (EVs) isolated by hydrostatic filtration dialysis (HFD) method. Raman spectra obtained for urinary EVs (UEVs) showed distinct differences in the fingerprint region. In contrast, average Raman spectra of endothelium-derived EVs samples were almost identical. Cluster Analysis of UEVs significantly discriminated diabetic samples from control, moreover endothelium-derived EVs revealed stronger similarity between long hyperglycemia and normoglycemia samples compared to short hyperglycemia. Results obtained from Partial Least Squares analysis corresponded well with integral intensities of selected bands. Our proof-of-concept approach demonstrates the potential for Raman spectroscopy to be used both for identification of EVs molecular signatures in urine samples from patients with type 2 diabetes mellitus and good glycemic control and unsatisfactory glycemic control as well as for in vitro hyperglycemic model. This noninvasive technique may be useful in identifying new biomarkers of diabetes and renal complications. Urine has shown to be a particularly rich reservoir of extracellular vesicles (EVs) which are potential biomarkers of diabetes and its renal complications. EVs were isolated by Hydrostatic Filtration Dialysis and ultracentrifugation method. Raman spectroscopy was applied to the measurement of spectral signatures of vesicles. Partial Least Squares regression and Cluster Analysis were used for detailed analysis of all chemical differences between study samples. Raman spectroscopy allowed to distinguish diabetic patients (with good and unsatisfactory glycemic control) and healthy subjects. Additionally we showed the potential of Raman spectroscopy technique to be used to differentiate cells cultured in different glycemic conditions. Unlabelled Image [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
14. Raman spectroscopy of urinary extracellular vesicles to stratify patients with chronic kidney disease in type 2 diabetes.
- Author
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Kamińska, Agnieszka, Roman, Maciej, Wróbel, Andrzej, Gala-Błądzińska, Agnieszka, Małecki, Maciej T., Paluszkiewicz, Czesława, and Stępień, Ewa Ł.
- Subjects
EXTRACELLULAR vesicles ,CHRONIC kidney failure ,TYPE 2 diabetes ,PARTIAL least squares regression ,CHEMICAL fingerprinting ,CIRCULATING tumor DNA - Abstract
In this study, we verified the hypothesis that Raman signature of urinary extracellular vesicles (UEVs) can be used to stratify patients with diabetes at various stages of chronic kidney disease (CKD). Patients with type 2 diabetes diagnosed with different stages of CKD and healthy subjects were enrolled in the study. UEVs were isolated using low-vacuum filtration followed by ultracentrifugation. Correlation analysis, multiple linear regression and principal component analysis were used to find differences between spectral fingerprints of UEVs derived from both groups of patients. Electron microscopy and nanoparticle tracking analysis were applied to characterize the size and morphology of UEVs. We observed significant correlations between selected Raman bands measured for UEVs and clinical parameters. We found significant differences in the area under the specific bands originating mainly from proteins and lipids between the study groups. Based on the tryptophan and amide III bands, we were able to predict the estimated glomerular filtration rate (eGFR). Principal component analysis, partial least squares regression (PLSR) and correlation analysis of the UEV Raman spectra supported the results obtained from the direct analysis of Raman spectra. Our analysis revealed that PLSR and a regression model including tryptophan and amide III bands allows to estimate the value of eGFR. Urine extracellular vesicles (UEVs) represent a novel biomarker platform for liquid biopsy-based diagnosis. Isolation and Raman spectra analysis of UEVs from diabetic patients with different stages of chronic kidney disease (CKD). Raman molecular signatures correlates with metabolic parameters and disease progression. [Display omitted] [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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15. Mass Spectrometry-Based Proteomic Characterization of Cutaneous Melanoma Ectosomes Reveals the Presence of Cancer-Related Molecules.
- Author
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Surman, Magdalena, Kędracka-Krok, Sylwia, Hoja-Łukowicz, Dorota, Jankowska, Urszula, Drożdż, Anna, Stępień, Ewa Ł., and Przybyło, Małgorzata
- Subjects
EXOSOMES ,EXTRACELLULAR vesicles ,CANCER cell proliferation ,PROTEOMICS ,CELL motility ,MELANOMA - Abstract
Cutaneous melanoma (CM) is an aggressive type of skin cancer for which effective biomarkers are still needed. Recently, the protein content of extracellular vesicles (ectosomes and exosomes) became increasingly investigated in terms of its functional role in CM and as a source of novel biomarkers; however, the data concerning the proteome of CM-derived ectosomes is very limited. We used the shotgun nanoLC–MS/MS approach to the profile protein content of ectosomes from primary (WM115, WM793) and metastatic (WM266-4, WM1205Lu) CM cell lines. Additionally, the effect exerted by CM ectosomes on recipient cells was assessed in terms of cell proliferation (Alamar Blue assay) and migratory properties (wound healing assay). All cell lines secreted heterogeneous populations of ectosomes enriched in the common set of proteins. A total of 1507 unique proteins were identified, with many of them involved in cancer cell proliferation, migration, escape from apoptosis, epithelial–mesenchymal transition and angiogenesis. Isolated ectosomes increased proliferation and motility of recipient cells, likely due to the ectosomal transfer of different cancer-promoting molecules. Taken together, these results confirm the significant role of ectosomes in several biological processes leading to CM development and progression, and might be used as a starting point for further studies exploring their diagnostic and prognostic potential. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
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