32 results on '"Shiga-toxin"'
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2. The fat content and adiabatic heating impact the lethality of high pressure processing towards Escherichia coli.
- Author
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Van de Merwe, Chandré, Gänzle, Michael G., and McMullen, Lynn M.
- Subjects
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ESCHERICHIA coli , *YOGURT , *FAT content of meat , *ESCHERICHIA coli O157:H7 , *ADIABATIC compression , *FAT , *ADIPOSE tissues - Abstract
High hydrostatic pressure processing (HHP) is used to reduce or eliminate pathogens and spoilage bacteria in food. The aim of this study was to investigate the effect of fat on the pressure resistance of E. coli in beef and a yogurt model system. Ground beef and pH-adjusted (pH 5.5) yogurt were adjusted to a fat content from 3 to 35% with adipose tissue and crème fraiche, respectively, and inoculated with E. coli. Samples were treated at 600 MPa and 20 or 30 °C for 3 min. Sample temperatures were adjusted prior to compression to compensate adiabatic heating, or not. An increased fat content of ground beef decreased the pressure resistance of E. coli. This was observed irrespective of the temperature history of the treatment. For example, at 20 °C, an increase in fat content from 15.5 to 24.4% increased treatment lethality by 6 log CFU/g for E. coli MG 1655. The correction for adiabatic heating increased or decreased pressure resistance at 20 °C in a strain-specific manner. Addition of crème fraiche to pH-adjusted yogurt did not alter the pressure resistance of E. coli (strains MG 1655 and DM 18.3), or increased resistance (E. coli AW 1.7 and AW 1.3). In summary, the pressure resistance of E. coli is dependent on the fat content, the food matrix and the temperature trajectory during processing. The effect of adipose tissue in meat matrix links the fat content of meat to lipid oxidation and the oxidative stress response. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Occurrence of phoA and Shiga Toxin genes in Marketed Gandoffli, Ruditapes decussates.
- Author
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Ahmed, Ali M., Rashad, Nouran R., Ibrahim, Ahmed I. Y., Abdel-Wahab, Mona M., and Abdel-Wahab, Mariam A.
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ESCHERICHIA coli ,FOOD poisoning ,ENTEROBACTERIACEAE ,COLIFORMS ,SEAFOOD ,SHELLFISH ,KLEBSIELLA oxytoca ,FOOD security ,ACHROMOBACTER - Abstract
Generally, the majority of the food poisoning crisis from seafood comes out due to shellfish consumption, mainly gandofflibecause ofits filter feeders pattern. Many microbes are used as an indicator of the hygienic status of several foods, one of them is Escherichia coli which is used to detect fecal pollution in water and shellfish. Therefore, twenty gandoffli samples were randomly collected from local markets in Ismailia city, Egypt, for evaluation of Enterobacteriaceae counts, and identification of Escherichia coli and detection of phoA and Shiga toxin genes. The obtained results revealed that the total Enterobacteriaceae count of the gandoffli ranged from 7x10² to 7x10
5 cfu/g with an average of 5x104±3.5x104cfu/g. The occurrence of Enterobacteriaceae members in gandoffli was represented by E. coli (99%), Acinetobacter lwoffii (99%), Enterobacter hormaechei (85%), Klebsiella oxytoca (95%), Stentrophomonas maltophilia (85%), Moraxella lacunata (85%), Achromobacter xylosoxidans (93%), and ESBL E. coli (100%). In addition, E. coli isolated from gandoffli were subsequently serologically typed into O103, O55, O 128, O 126, and O157 then confirmed using conventional polymerase chain reaction by the presence of alkaline phosphatase gene. Upon checking virulence genes in E. coli: stx2 was absent in O157 and O103. Also, stx1 was present in O157 and absent in O103. Its should be concluded that gandoffli were exposed to Enterobacteriaceae contamination from different sources during handling, storage and distribution. Gandoffli had E. coli and their toxin that can pose serious public health hazards to consumers. Strick hygienic measures must be applied through the chain of gandoffli production to ensure their safety for consumer consumptions [ABSTRACT FROM AUTHOR]- Published
- 2023
4. The Ability of Shiga Toxin-Producing Escherichia coli to Grow in Raw Cow's Milk Stored at Low Temperatures.
- Author
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Idland, Lene, Bø-Granquist, Erik G., Aspholm, Marina, and Lindbäck, Toril
- Subjects
ESCHERICHIA coli ,LOW temperatures ,GENETIC profile ,COWS ,AGRICULTURAL exhibitions ,RAW milk - Abstract
Despite the lack of scientific evidence, some consumers assert that raw milk is a natural food with nutritional and immunological properties superior to pasteurized milk. This has led to the increased popularity of unpasteurized cow milk (UPM) and disregard for the risks of being exposed to zoonotic infections. Dairy cattle are healthy carriers of Shiga toxin (Stx)-producing E. coli (STEC), and contaminated UPM has caused STEC outbreaks worldwide. The association between STEC, carrying the eae (E. coli attachment effacement) gene, and severe diseases is well-established. We have previously isolated four eae positive STEC isolates from two neighboring dairy farms in the Southeast of Norway. A whole genome analysis revealed that isolates from different farms exhibited nearly identical genetic profiles. To explore the risks associated with drinking UPM, we examined the ability of the isolates to produce Stx and their growth in UPM at different temperatures. All the isolates produced Stx and one of the isolates was able to propagate in UPM at 8 °C (p < 0.02). Altogether, these results highlight the risk for STEC infections associated with the consumption of UPM. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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5. Managing Shiga Toxin-Producing E. coli Using Statistical Process Control Charts for Routine Health and Production Monitoring in Pig Farming
- Author
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Annalisa Scollo, Mattia Fasso, Patrizia Nebbia, Claudio Mazzoni, and Claudia Cossettini
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Shiga-toxin ,Escherichia coli ,Oedema disease ,pig ,statistical process control (SPC) ,Veterinary medicine ,SF600-1100 - Abstract
Oedema disease (ED) caused by Shiga-toxin-producing E. coli in pigs is a serious life-threatening disease, particularly among weaned piglets. When a preventive protocol is adopted in a specific farm, interpretation of effectiveness is often complicated in field conditions due to natural or “common cause” variation. For this reason, in this study a Statistical process control (SPC) approach was used to retrospectively evaluate the application of an ED preventive protocol (lower protein diet, ad-libitum fiber, vaccination at 5 days of age) in an infected commercial piglets' weaning site. The analysis was established over a 9-years period (n = 75 consecutive batches; 1,800 weaners per batch) using mortality for each batch as the key parameter of health and production; the statistics and the control limits (mean ± 3-fold sd; UCL, upper control limit; LCL, lower control limit) were based on data from the first 28 batches (Period 1) before the onset of the first ED clinical signs. The charts allowed the detection of defined out of control batches (i.e., with mortality out of the intervention limits) from batch 29 ongoing, exploring a Period 2 (unstable production and ED clinical signs; 36 batches) and a Period 3 (application of the ED preventive protocol; 11 batches). Mortality evaluation using SPC revealed a production system defined under-control (mean moving range bar = 1,34%; UCL = 4,37%; LCL = 0%) during Period 1. During Period 2, charts lost the state of statistical control, as showed by several signals of special cause variation due to the ED outbreak. Period 3 was characterized again by a state of statistical control, where no signals of special cause variation was showed. In conclusion, the retrospective application of SPC charts in the present study was able to confirm the efficacy of an ED preventive protocol in reducing mortality in a piglets' weaning site. SPC charting is suggested as an useful tool to provide insights into relationships between health, managerial, and welfare decision and some selected iceberg parameters in livestock.
- Published
- 2022
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6. Prevalence and antibiotic resistance profile of Shiga toxin-producing Escherichia coli isolated from diarrheal samples
- Author
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Farzad Esavand Heydari, Mojtaba Bonyadian, Hamdallah Moshtaghi, and Masoud Sami
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Shiga-toxin ,Escherichia coli ,Antibiotic resistance ,Diarrhea ,Virulence genes ,Microbiology ,QR1-502 - Abstract
Background and Objectives: Enterohemorrhagic Escherichia coli (EHEC) causes bloody and non-bloody diarrhea, intestinal infection and extraintestinal complications in humans. This study aimed to isolate and evaluate the prevalence of E. coli O157: H7 and other Shiga toxin-producing E. coli (STEC) and identify the virulence genes (stx1, stx2, hly and eaeA) from patients with diarrhea. Also, the antibiotic resistance profile of the isolated strains was evaluated. Materials and Methods: A total of 100 stool samples were collected from patients with acute diarrhea referring to the hospital and clinics in Isfahan County, Iran. Phenotypic tests and PCR assay were used for detection of E. coli O157: H7 and other Shiga toxin-producing E. coli. The presence of virulence genes (stx1, stx2, hly and eaeA) were identified by PCR. The antibiotic resistance profile of the isolates was determined using the agar disk diffusion method. The results were analyzed descriptively by Sigma stat version 4 software. Results: Seventy - eight out of 100 samples (78%) were contaminated with E. coli. E. coli O157 was isolated from five samples (6.4%), of which only two strains (2.56%) were identified as E. coli O157: H7. According to the results, out of two E. coli O157: H7 isolates, one (50%) isolate contained eaeA and two isolates (100%) contained Stx1, Stx2, hlyA genes. Out of three (3.84%) E. coli O157: HN, one of the isolate (33.3%) contained stx1 and, two isolates (66.7%) were positive for hlyA genes. Also, the results revealed that six strains (7.69%) were non-O157: H7 STEC, of which two isolates (33.3%) contained stx1 and four isolates (66.7%) were positive for stx2 and hlyA genes. The results of antibiogram tests revealed that all of the STEC isolates (100%) were sensitive to imipenem followed by kanamycin, gentamicin and nitrofurantoin (91%). High resistance (54.5%) to ampicillin and ciprofloxacin was observed among the STEC isolates. Conclusion: The results of the current study showed that although the prevalence of E. coli O157: H7 was low among patients with diarrhea, the other STEC strains with relative resistance to antibiotics are more prevalent.
- Published
- 2020
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7. Prevalence and antibiotic resistance profile of Shiga toxin-producing Escherichia coli isolated from diarrheal samples.
- Author
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Heydari, Farzad Esavand, Bonyadian, Mojtaba, Moshtaghi, Hamdallah, and Sami, Masoud
- Subjects
- *
DRUG resistance in bacteria , *ESCHERICHIA coli O157:H7 , *ESCHERICHIA coli , *BETA lactamases , *INTESTINAL infections , *BACTERIAL toxins - Abstract
Background and Objectives: Enterohemorrhagic Escherichia coli (EHEC) causes bloody and non-bloody diarrhea, intestinal infection and extraintestinal complications in humans. This study aimed to isolate and evaluate the prevalence of E. coli O157: H7 and other Shiga toxin-producing E. coli (STEC) and identify the virulence genes (stx1, stx2, hly and eaeA) from patients with diarrhea. Also, the antibiotic resistance profile of the isolated strains was evaluated. Materials and Methods: A total of 100 stool samples were collected from patients with acute diarrhea referring to the hospital and clinics in Isfahan County, Iran. Phenotypic tests and PCR assay were used for detection of E. coli O157: H7 and other Shiga toxin-producing E. coli. The presence of virulence genes (stx1, stx2, hly and eaeA) were identified by PCR. The antibiotic resistance profile of the isolates was determined using the agar disk diffusion method. The results were analyzed descriptively by Sigma stat version 4 software. Results: Seventy - eight out of 100 samples (78%) were contaminated with E. coli. E. coli O157 was isolated from five samples (6.4%), of which only two strains (2.56%) were identified as E. coli O157: H7. According to the results, out of two E. coli O157: H7 isolates, one (50%) isolate contained eaeA and two isolates (100%) contained Stx1, Stx2, hlyA genes. Out of three (3.84%) E. coli O157: HN, one of the isolate (33.3%) contained stx1 and, two isolates (66.7%) were positive for hlyA genes. Also, the results revealed that six strains (7.69%) were non-O157: H7 STEC, of which two isolates (33.3%) contained stx1 and four isolates (66.7%) were positive for stx2 and hlyA genes. The results of antibiogram tests revealed that all of the STEC isolates (100%) were sensitive to imipenem followed by kanamycin, gentamicin and nitrofurantoin (91%). High resistance (54.5%) to ampicillin and ciprofloxacin was observed among the STEC isolates. Conclusion: The results of the current study showed that although the prevalence of E. coli O157: H7 was low among patients with diarrhea, the other STEC strains with relative resistance to antibiotics are more prevalent. [ABSTRACT FROM AUTHOR]
- Published
- 2020
8. Prevalence and characteristics of Shiga-toxin producing Escherichia coli (STEC) isolated from beef slaughterhouse.
- Author
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Parvej, Md. Shafiullah, Mamun, Montasir, Hassan, Jayedul, Mahmud, Md. Muket, Rahman, Marzia, Rahman, Md. Tanvir, Rahman, Md. Bahanur, and Nazmul Hussain Nazir, K. H. M.
- Subjects
ESCHERICHIA coli ,FOODBORNE diseases ,PATHOGENIC microorganisms - Abstract
Objective: Shiga-toxin producing Escherichia coli (STEC) is the most important foodborne bacterial pathogen worldwide and the bovine animals are assumed as a reservoir of this pathogen. The present study was conducted to assess the role of bovine animals as the source of STEC. Materials and methods: To assess the role of bovine animals as the source of STEC, we examined 100 samples (50 rectal swab and 50 beef samples) collected from the local beef slaughterhouses by cultural, morphological, biochemical tests and polymerase chain reaction. Finally, the drug resistance pattern of isolated organisms has been examined. Result: In the preliminary screening by polymerase chain reaction (PCR), E. coli was more prevalent in rectal swab (n=21/50) than beef samples (n=16/50). Among 39 isolated E. coli, 10 isolates were confirmed as STEC (Rectal swab=7, Beef=3) by PCR, where stx2 gene (n=7/10) was predominant than stx1 gene (n=3/10). Remaining 29 isolates did not react to stx primers in PCR. Presence of STEC in beef samples was significantly associated with the fecal contamination at P≤0.1 (0.074818) in Pearson's correlation coefficient method. In addition, most of the isolated STEC strains were resistant to one or more commonly used antimicrobials in the country. Conclusion: The bovine animals and its products could be an important source of multidrug-resistant STEC in the country. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
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9. Epidemiology and characterization of Escherichia coli outbreak on a pig farm in South Africa.
- Author
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Kanengoni, Arnold T., Thomas, Ronald, Gelaw, Awoke K., and Madoroba, Evelyn
- Subjects
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PIGLETS , *SWINE mortality , *ESCHERICHIA coli - Abstract
An investigation of mortality of piglets through clinical signs, post-mortem, histopathology and bacteriological analyses revealed the causal organism to be Escherichia coli, mainly O149:K91:K88 which belongs to the enterotoxigenic biotypes. Molecular characterization and epidemiologic analysis elucidated it as shiga-toxin (ST) E. coli resistant to ampicillin, cefotaxime, tetracycline, trimethoprim-sulfamethoxazole, tylosin and neomycin. Conventional PCR results detected genes for ST-2, adhesin involved in diffuse adherence (AIDA-1) and F18 fimbriae virulence factors. Survival analyses and logistic regression of piglet mortality patterns showed that season of weaning, weaning weight and age of dam had significant influence on survival rate of piglets. Factors affecting pathogenicity of bowel edema and survival of affected piglets on a farm with persistent infection were reported for the first time. An association of E. coli O149:K91:K88 (F4) with clinical edema disease was made even though it has been reported in the past that this serotype does not produce ST. It was concluded that more stringent measures to mitigate the impact of the disease need to be targeted for spring and in older sows. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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10. Quantification of E. coli O157 and STEC in feces of farm animals using direct multiplex real time PCR (qPCR) and a modified most probable number assay comprised of immunomagnetic bead separation and qPCR detection.
- Author
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Guy, Rebecca A., Tremblay, Donald, Beausoleil, Louise, Harel, Josée, and Champagne, Marie-Josée
- Subjects
- *
PREDICATE calculus , *ESCHERICHIA coli , *FECES , *DOMESTIC animals , *POLYMERASE chain reaction , *IMMUNOMAGNETIC separation - Abstract
Abstract: To better understand Escherichia coli O157:H7 on-farm transmission dynamics requires sensitive methods for quantification of a broad range of concentrations of target organisms. For this purpose, a multiplex real time PCR (qPCR) assay was developed for quantification of O157 E. coli from 1g fecal samples of cattle and other animal species, targeting the Shiga toxin genes (stx1 and stx2) and the O157 somatic antigen gene, per. The multiplex qPCR assay provided specific detection across a broad range of bacterial concentrations with a lower limit of detection (LOD) of 101 genome copies which is equivalent to 101 bacteria. However, the LOD, when direct qPCR was applied to quantification of the targets in the feces of dairy cattle, was 103 genome copies per gram of feces. Enumeration below the threshold for direct qPCR was performed using a modified most probable number (mMPN) method whereby E. coli O157 in enriched samples was isolated using immunomagnetic bead separation (IMS) and detected using qPCR, thus reducing the time and logistic constraints of biochemical/serological/gel analysis. Application of the mMPN (IMS/qPCR) assay to samples that were negative when tested using direct qPCR alone permitted quantification of low levels of E. coli O157 below levels detectable with direct qPCR. The direct qPCR and mMPN (IMS/qPCR) assays were applied to fecal samples from dairy, beef, swine and poultry feces. This approach can be employed to gain a better understanding of the patterns of infection in animals for analysis of on-farm transmission dynamics, for evaluating the effects of on-farm control strategies and for risk assessment in public health. [Copyright &y& Elsevier]
- Published
- 2014
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11. Prevalence and characteristics of Shiga-toxin producing Escherichia coli (STEC) isolated from beef slaughterhouse
- Author
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Md. Bahanur Rahman, Montasir Mamun, Md. Shafiullah Parvej, Md. Tanvir Rahman, Jayedul Hassan, K. H. M. Nazmul Hussain Nazir, Marzia Rahman, and Md. Muket Mahmud
- Subjects
0301 basic medicine ,lcsh:Veterinary medicine ,General Veterinary ,030106 microbiology ,Shiga toxin ,Drug resistance ,Beef cattle ,Biology ,medicine.disease_cause ,Microbiology ,law.invention ,Fecal coliform ,03 medical and health sciences ,fluids and secretions ,STX2 ,law ,medicine ,biology.protein ,lcsh:SF600-1100 ,Animal Science and Zoology ,Pathogen ,Escherichia coli ,E. coli ,Shiga-toxin ,PCR ,Stx1 ,Stx2 ,Polymerase chain reaction - Abstract
Objective: Shiga-toxin producing Escherichia coli (STEC) is the most important foodborne bacterial pathogen worldwide and the bovine animals are assumed as a reservoir of this pathogen. The present study was conducted to assess the role of bovine animals as the source of STEC. Materials and methods: To assess the role of bovine animals as the source of STEC, we examined 100 samples (50 rectal swab and 50 beef samples) collected from the local beef slaughterhouses by cultural, morphological, biochemical tests and polymerase chain reaction. Finally, the drug resistance pattern of isolated organisms has been examined. Result: In the preliminary screening by polymerase chain reaction (PCR), E. coli was more prevalent in rectal swab (n=21/50) than beef samples (n=16/50). Among 39 isolated E. coli, 10 isolates were confirmed as STEC (Rectal swab=7, Beef=3) by PCR, where stx2 gene (n=7/10) was predominant than stx1 gene (n=3/10). Remaining 29 isolates did not react to stx primers in PCR. Presence of STEC in beef samples was significantly associated with the fecal contamination at P≤0.1 (0.074818) in Pearsons correlation coefficient method. In addition, most of the isolated STEC strains were resistant to one or more commonly used antimicrobials in the country. Conclusion: The bovine animals and its products could be an important source of multidrug-resistant STEC in the country. [J Adv Vet Anim Res 2018; 5(2.000): 218-225]
- Published
- 2018
12. Quantitative detection and characterization of Shiga toxin-producing Escherichia coli O157 and non-O157 in raw vegetables by MPN-PCR in Malaysia.
- Author
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Loo, Y. Y., Puspanadan, S., Goh, S. G., Kuan, C. H., Chang, W. S., Lye, Y. L., John, Y. H. T., Rukayadi, Y., Yoshitsugu, N., Nishibuchi, M., and Son, R.
- Subjects
ESCHERICHIA coli O157:H7 ,BACTERIAL contamination ,FOODBORNE diseases ,TOXINS ,ESCHERICHIA coli - Abstract
Foodborne diseases are mainly caused by bacterial contamination which can lead to severe diarrhea. This study aimed to detect the presence of Shiga toxin-Producing Escherichia coli O157, Escherichia coli non-O157 and virulence gene in raw vegetables. The samples were purchased from wet market and hypermarket in Selangor. The detections were carried out by using the combination methods of Most Probable Number-Polymerase Chain Reaction (MPNPCR). A total of 37(18.5%) samples were found to be contaminated by STEC. Out of these 37 isolates, four (10.8%) of the isolates were E. coli O157 while 33(89.2%) were E. coli non-O157. However, there was no E. coli O157:H7 detected in all the samples. The occurrence of Shiga toxin-Producing E. coli in edible raw vegetables samples suggests the importance of this pathogen in vegetables. Therefore, more studies are required to remove this pathogen from vegetables. [ABSTRACT FROM AUTHOR]
- Published
- 2013
13. Encore d'actualité ! Escherichia coli et syndrome hémolytique et urémique chez l'enfant et l'adulte.
- Author
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Raimbourg, Q., d'Ythurbide, G., and Rondeau, E.
- Subjects
HEMOLYTIC-uremic syndrome treatment ,THROMBOTIC thrombocytopenic purpura ,ACUTE kidney failure ,JUVENILE diseases ,ESCHERICHIA coli - Abstract
Copyright of Reanimation is the property of Lavoisier and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2012
- Full Text
- View/download PDF
14. Carriage of Shiga-toxigenic Escherichia coli by native marsupials in Australia
- Author
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Rupan, Rodrick, Jennison, Amy V., Smith, Helen V., and Cobbold, Rowland N.
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VEROCYTOTOXINS , *MARSUPIALS , *ESCHERICHIA coli toxins , *ZOONOSES , *DISEASE vectors , *PUBLIC health , *POLYMERASE chain reaction - Abstract
Abstract: Shiga-toxigenic strains of Escherichia coli (STEC) are zoonotic pathogens with human health, meat processing and trade impacts. Cattle are the principal reservoirs of STEC, although other animals can be carriers. The STEC status of Australian native marsupials has not been formatively described to date. The aim of the current study was to investigate carriage of STEC by native Australian marsupials in Southeast Queensland. Faeces from a variety of marsupial species, stratified by gastrointestinal morphology and dietary type, were screened for stx 1, stx 2 and other STEC virulence genes by PCR. Positive samples were cultured to isolate STEC for characterisation. A number of macropods from both captive and wild habitats had evidence of STEC in their faeces. Rates of stx carriage by macropods (8.6%) were comparable, though generally low, compared to cattle. Eastern grey kangaroos had the highest rate of stx presence in faeces (10.3%). Hindgut-fermenting and monogastric marsupials had no evidence of STEC shedding. Based on virulence marker possession and serotype, the human pathogenic potential of isolates was low. This is the first report of Australian marsupials carrying STEC. Australian native macropods may act as reservoirs for STEC strains, but the potential significance to public health and/or livestock epidemiology remains questionable. [Copyright &y& Elsevier]
- Published
- 2012
- Full Text
- View/download PDF
15. Enteropathogenic (EPEC) and Shigatoxigenic Escherichia coli (STEC) in broiler chickens and derived products at different retail stores
- Author
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Alonso, Mónica Zulema, Lucchesi, Paula María Alejandra, Rodríguez, Edgardo Mario, Parma, Alberto Ernesto, and Padola, Nora Lía
- Subjects
- *
ESCHERICHIA coli , *BROILER chickens , *RETAIL stores , *VEROCYTOTOXINS , *FOOD contamination , *FOOD pathogens , *DIARRHEA in infants , *POLYMERASE chain reaction - Abstract
Abstract: Enteropathogenic (EPEC) and Shigatoxigenic Escherichia coli (STEC) are foodborne pathogens that cause potentially fatal infant diarrhea and hemolytic uremic syndrome, respectively. We investigated the presence of intimin and Shiga toxin encoding genes, as indicators of EPEC and STEC presence in cloacae and chicken products. The analyzed products were hamburgers, giblets and carcasses obtained from poultry and butcher shops. EPEC contamination predominated over STEC contamination in cloacae and chicken products, although some differences were detected when the kind of food or shop was taken into account. In particular, among chicken hamburgers we found a greater proportion of EPEC than STEC-positive samples at poultry shops, while in butcheries STEC was predominant. This finding could suggest cross contamination during handling at butcheries. The results indicate that it is necessary to improve hygienic measures both during slaughtering and manipulation of chicken products at retail stores, to provide a safe product to consumers. [Copyright &y& Elsevier]
- Published
- 2012
- Full Text
- View/download PDF
16. The effect of probiotics and organic acids on Shiga-toxin 2 gene expression in enterohemorrhagic Escherichia coli O157:H7
- Author
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Carey, Christine M., Kostrzynska, Magdalena, Ojha, Shivani, and Thompson, Stacey
- Subjects
- *
PROBIOTICS , *ESCHERICHIA coli , *GENE expression , *TOXINS - Abstract
Abstract: Probiotics are known to have an inhibitory effect against the growth of various foodborne pathogens, however, the specific role of probiotics in Shiga-toxin-producing Escherichia coli (STEC) virulence gene expression has not been well defined. Shiga toxins are members of a family of highly potent bacterial toxins and are the main virulence marker for STEC. Shiga toxins inhibit protein synthesis in eukaryotic cells and play a role in hemorrhagic colitis and hemolytic uremic syndrome. STEC possesses Shiga toxin 1 (Stx1) and Shiga toxin 2 (Stx2), both of which have A and B subunits. Although STEC containing both Stx1 and Stx2 has been isolated from patients with hemorrhagic colitis, Stx2 is more frequently associated with human disease complications. Thus, the effect of Lactobacillus, Pediococcus, and Bifidobacterium strains on stx2A expression levels in STEC was investigated. Lactic acid bacteria and bifidobacteria were isolated from farm animals, dairy, and human sources and included L. rhamnosus GG, L. curvatus, L. plantarum, L. jensenii, L. acidophilus, L. casei, L. reuteri, P. acidilactici, P. cerevisiae, P. pentosaceus, B. thermophilum, B. boum, B. suis and B. animalis. E. coli O157:H7 (EDL 933) was coincubated with sub-lethal concentrations of each probiotic strain. Following RNA extraction and cDNA synthesis, relative stx2A mRNA levels were determined according to a comparative critical threshold (Ct) real-time PCR. Data were normalized to the endogenous control glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and the level of stx2A expression between treated and untreated STEC was compared. Observed for all probiotic strains tested, stx2A was down-regulated, when compared to the control culture. Probiotic production of organic acids, as demonstrated by a decrease in pH, influenced stx2A gene expression. [Copyright &y& Elsevier]
- Published
- 2008
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17. Shiga-toxigenic Escherichia coli O157 and non-Shiga-toxigenic E. coli O157 respond differently to culture and isolation from naturally contaminated bovine faeces.
- Author
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Durso, L. M. and Keen, J. E.
- Subjects
- *
FUNGUS-bacterium relationships , *MICROORGANISMS , *PATHOGENIC microorganisms , *MEDICAL microbiology , *ESCHERICHIA , *ESCHERICHIA coli , *ENTEROBACTERIACEAE , *ESCHERICHIA coli O157:H7 , *ANTIBACTERIAL agents , *VANCOMYCIN - Abstract
Aim: To quantify the effect of enrichment, immunomagnetic separation (IMS), and selective plating procedures on isolation of Shiga-toxigenic Escherichia coli O157 (STEC O157) and non-Shiga-toxigenic Escherichia coli O157 (non-STEC O157) from naturally contaminated bovine faeces. Methods and Results: Two broth enrichment times, two IMS strategies, and two selective plating media were evaluated. STEC O157 and non-STEC O157 strains were often isolated from the same faecal specimen and responded differently to the isolation protocols. A large-volume IMS system was more sensitive than a conventional small-volume IMS method, but was also more expensive. STEC O157 was more frequently isolated from 6 h enriched broth and ChromAgar plates containing 0·63 mg l−1 potassium tellurite (TCA). Non-STEC O157 was more frequently isolated from un-enriched broth and ChromAgar plates without tellurite (CA). Conclusions: The combination of 6-h enrichment in Gram-negative broth containing vancomycin, cefixime and cefsuludin, large volume IMS and selective plating on TCA maximized STEC O157 recovery from naturally contaminated cattle faecal specimens. Significance and Impact of the Study: The pairing of proper enrichment with a specific plating procedure is key for STEC O157 recovery from naturally contaminated bovine faeces. Incorporating tellurite into an E. coli O157 detection strategy may select for the subset of E. coli O157 that contains the Shiga-toxin genes. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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18. Caracterización geno-fenotípica de aislados de Escherichia Coli (AEEC) de pacientes pediátricos con procesos diarreicos infecciosos en la ciudad de La Paz: Implicancias para el diagnóstico y epidemiología de las...
- Author
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Sánchez, Samanta, Ropmecin, Paola, Guachalla, Luis Miguel, and Iñiguez, Volga
- Abstract
Copyright of Revista Chilena de Pediatría is the property of Revista Chilena de Pediatria and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2006
19. Isolation of E. coli O157:H7 and non-O157 STEC in different matrices: review of the most commonly used enrichment protocols.
- Author
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Vimont, A., Vernozy-Rozand, C., and Delignette-Muller, M.-L.
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ESCHERICHIA coli , *ANTIBIOTICS , *ANTI-infective agents , *ESCHERICHIA coli O157:H7 , *ESCHERICHIA , *MICROBIAL metabolites , *ENTEROBACTERIACEAE , *MICROBIAL toxins , *ALLELOPATHIC agents - Abstract
Aims: To review and characterize the enrichment protocols used for detecting all Shiga-Toxin producing Escherichia coli (STEC) from different matrices. Methods and Results: Firstly, the frequency distribution of the factors characterizing the enrichment protocols is described; secondly, a multiple correspondence analysis is performed to display profiles of association of these factors, and thirdly, published results concerning the relative performances of the protocols are summarized. Trypticase Soy Broth (TSB) is reported as the most frequently used enrichment broth. More often, one antibiotic is added in enrichment broths and these broths are incubated for a duration of 16–24 h at 35–37°C. It also appears that the incubation temperature does not seem to be related to the type of serogroup looked for and that antibiotics are used regardless of the matrix analysed. Finally, results relating to the enrichment protocol efficacy are rare and differ from one study to another. Conclusions: Statistical studies must be conducted so as to assess the efficacy of the main enrichment protocols investigated in this study. Significance and Impact of the Study: This study reviews the most commonly used enrichment protocols and highlights the lack of results as to their relative efficacy. [ABSTRACT FROM AUTHOR]
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- 2006
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20. Molecular screening of bovine raw milk for the presence of Shiga toxin-producing Escherichia coli (STEC) on dairy farms
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Rosangela Uhrig Salvatori, Débora Mara Kich, Rachel Dias Molina, Adriane Pozzobon, Ivan Cunha Bustamante-Filho, Tatiane Vendramin, and Claucia Fernanda Volken de Souza
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lcsh:TX341-641 ,shiga-toxin ,medicine.disease_cause ,Microbiology ,fluids and secretions ,STX2 ,lcsh:Technology (General) ,Multiplex polymerase chain reaction ,medicine ,Multiplex ,Food science ,Escherichia coli ,Dairy cattle ,milk ,biology ,Shiga toxin ,multiplex PCR ,Raw milk ,medicine.disease ,Mastitis ,cattle ,biology.protein ,lcsh:T1-995 ,lcsh:Nutrition. Foods and food supply ,Food Science ,Biotechnology - Abstract
Milkborne transmission of Shiga toxin- producing Escherichia coli (STEC) has raised considerable concern due to recent outbreaks worldwide and poses a threat to public health. The aim of this study was to develop a sensitive and specific multiplex PCR assay to detect the presence of STEC in bovine raw milk. To identify E. coli (ATCC 25922) contamination, the gene uspA was used, and PCR sensitivity and specificity were accessed by testing diluted samples ranging from 2 to 2.0 × 10(6) CFU/mL. To detect STEC, the stx1 and stx2 genes were selected as targets. After reaction standardization, the multiplex assay was tested in raw milk collected from 101 cows on dairy farms. PCR assay for E. coli detection had a specificity of 100% and sensitivity of 79% (P
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- 2014
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21. Occurrence of Hybrid Escherichia coli Strains Carrying Shiga Toxin and Heat-Stable Toxin in Livestock of Bangladesh
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Alejandro Cravioto, Munirul Alam, Subhra Chakraborty, Atiqul Islam, Shirajum Monira, Rozina Parveen, Makoto Ohnishi, Fatema Tuz Johura, Niaz Rahim, Haruo Watanabe, Badrul Hasan, Anisur Rahman Khan, Christine Marie George, Sunjukta Ahsan, Armando Navarro, and Abdus Sadique
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Shiga-toxin ,0301 basic medicine ,030106 microbiology ,Enterotoxin ,Biology ,medicine.disease_cause ,Microbiology ,Arbetsmedicin och miljömedicin ,03 medical and health sciences ,fluids and secretions ,medicine ,Pulsed-field gel electrophoresis ,Escherichia coli ,2. Zero hunger ,hybrid ,business.industry ,Toxin ,multidrug resistant ,Public Health, Environmental and Occupational Health ,Public Health, Global Health, Social Medicine and Epidemiology ,Shiga toxin ,PFGE ,Occupational Health and Environmental Health ,bacterial infections and mycoses ,Virology ,3. Good health ,livestock ,Multiple drug resistance ,Folkhälsovetenskap, global hälsa, socialmedicin och epidemiologi ,Diarrhea ,030104 developmental biology ,biology.protein ,bacteria ,Livestock ,Public Health ,medicine.symptom ,business ,enterotoxin - Abstract
Shiga toxin-producing Escherichia coli (STEC) and enterotoxigenic E. coli (ETEC) are important causes of diarrhea in humans and animals worldwide. Although ruminant animals are the main source of STEC, diarrhea due to this pathotype is very low in Bangladesh where ETEC remains the predominant group associated with childhood diarrhea. In the present study, E. coli strains (n = 35) isolated from Bangladesh livestock (goats, sheep, and cattle) and poultry (chicken and ducks) were analyzed for the presence of major virulence factors, such as Shiga toxins (STX-1 and STX-2), heat-labile toxin, and heat-stable toxins (STa and STb). Multiplex polymerase chain reaction results revealed 23 (66%) E. coli strains to be virulent possessing either sta (n = 5), stx (stx1, n = 8; stx2, n = 2), or both (n = 8) genes in varying combinations. Thirty-four percent (8/23) of strains from livestock were hybrid type that carried both stx (either stx1 or stx2) and ETEC-specific enterotoxin gene sta. Serotyping results revealed that the ETEC strains belonged to five serotypes, namely O36: H5, O174: H-, O152: H8, O109: H51, and O8: H21, while the STEC-producing strains belonged to serotypes O76: H19 (n = 3), O43: H2 (n = 2), O87: H16 (n = 2), OR: H2 (n = 1), O110: H16 (n = 1), and O152: H8 (n = 1). The STEC-ETEC hybrid strains belonged to serotypes O76: H19 (n = 3), O43: H2 (n = 2), O87: H16, OR: H2, and O152: H8. Forty percent (2/5) of the ETEC and 20% (2/10) of the STEC strains were multidrug resistant with the highest drug resistance (50%) being found in the hybrid strains. Molecular fingerprinting determined by pulsed-field gel electrophoresis and cluster analyses by dendrogram revealed that, genetically, STEC-ETEC hybrid strains were highly heterogeneous. Multidrug-resistant E. coli STEC-ETEC hybrid strains in domesticated animals pose a public health threat for humans in Bangladesh.
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- 2017
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22. Antibodies anti-Shiga toxin 2 B subunit from chicken egg yolk: Isolation, purification and neutralization efficacy
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Patricia Geoghegan, Y.R. Parma, Mariano E. Fernandez-Miyakawa, A. Rogé, Adriana Cangelosi, Paula Maria Alejandra Lucchesi, Pablo Chacana, and A. Kahl
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Shiga-toxin ,CIENCIAS MÉDICAS Y DE LA SALUD ,food.ingredient ,animal diseases ,Antibody Affinity ,Stx2B ,Immunoglobulins ,Virulence ,Mice, Inbred Strains ,Toxicology ,medicine.disease_cause ,Shiga Toxin 2 ,Article ,Neutralization ,Biotecnología de la Salud ,Microbiology ,Mice ,fluids and secretions ,food ,Neutralization Tests ,hemic and lymphatic diseases ,Yolk ,IgY ,medicine ,Animals ,Escherichia coli ,biology ,Shiga toxin ,biochemical phenomena, metabolism, and nutrition ,Chicken ,Antibodies, Bacterial ,Egg Yolk ,Virology ,Treatment ,IgY technology ,biology.protein ,Vero cell ,bacteria ,Rabbits ,Antitoxin ,Antibody ,Chickens ,Otras Biotecnologías de la Salud - Abstract
Shiga toxins (Stx1 and Stx2) are the main virulence factors of enterohemorrhagic Escherichia coli (EHEC), a foodborne pathogen associated with diarrhea, hemorrhagic colitis and hemolytic uremic syndrome. The aim of this study was to evaluate the antibodies against Stx2 obtained from egg yolks of laying hens immunized with a recombinant Stx2B subunit. A high specific response in serum was observed 25 days after the first immunization and IgY antibodies were extracted from day 47th and purified from egg yolk. A concentration of 0.84 mg of total IgY/ml of egg yolk was obtained, of which 8% were antigen specific. The ability of anti-Stx2B IgY to recognize Stx2B and Stx2 either in solid-phase or in solution were evaluated and compared with anti-Stx2B rabbit antibodies by Western blotting and ELISA. The protective efficacy of IgY against Stx2 was determined by in vitro and in vivo experiments. The results show that IgY was able to recognize Stx2B and Stx2 in denatured conditions, attached to a solid-phase and free in solution. The anti-Stx2B IgY could effectively block the biological activity of Stx2 on Vero cells and protect mice from Stx2 challenge. The data suggest that immunization of hens with Stx2B could be a strategy to obtain at low cost a relatively high concentration of anti-Stx2 egg yolk IgY, able to neutralize Stx2 lethal activity. IgY technology could be an useful tool for research, diagnosis and therapy of EHEC infection., Highlights ► We studied the antibodies response in laying hens against Shiga toxin 2 B subunit. ► IgY antibodies anti-Shiga toxin 2 are obtained from egg yolk. ► Specific IgY binds to Shiga toxin 2 and neutralize activity in vivo and in vitro.
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- 2011
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23. Isolation and characterisation of Shiga toxin-producing Escherichia coli from Norwegian bivalves.
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Martin, Carlota Cedillo, Svanevik, Cecilie Smith, Lunestad, Bjørn Tore, Sekse, Camilla, and Johannessen, Gro S.
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BIVALVES , *ESCHERICHIA coli , *SHELLFISH - Abstract
Only a few studies concerning Shiga toxin-producing E. coli (STEC) detection in bivalves and their harvesting areas have been reported, and to the best of our knowledge there are no outbreaks associated with STEC from bivalves described. The aim of the present study was to investigate the occurrence of STEC in Norwegian bivalves, and to characterize potential STEC isolated from the samples. A total of 269 samples of bivalves were screened for the presence of stx and eae genes, and markers for the serogroups O26, O103, O111, O145 and O157 by using ISO TS 13136 (2012). The screening returned 19 samples that were positive for stx and eae , and attempts of isolation of STEC were made from these samples. Presumptive STEC were obtained from three samples, and three isolates (one from each sample) were subjected to whole-genome-sequencing (WGS). The WGS revealed that one of the isolates did not carry the stx genes, while the other two were identified as stx 2i positive E. coli O9:H19 and stx 2g positive E. coli O96:H19. Neither of the two STEC isolates were positive for virulence markers such as eae and ehx. The results suggest that the occurrence of STEC in Norwegian bivalves is low. • First time in Norway that STEC has been detected in bivalves. • Bivalves could be a potential vehicle for transmission of STEC. • One strain harboured a newly described Shiga toxin variant; stx 2 i. • Hybrid STEC O96:H19 isolated from shellfish (stx 2g and ST-Ia) with newly identified MLST type. [ABSTRACT FROM AUTHOR]
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- 2019
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24. Haemolytic uraemic syndrome - a rare case report of bloody diarrhoea in adults.
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Radhakrishnan, Shiva Thambiah, Ruban, Aruchuna, Uthayakumar, Aarthy Kanmany, Cohen, Patrizia, Levy, Jeremy, and Teare, Julian
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APPENDICITIS , *DIARRHEA , *ACUTE kidney failure , *SYNDROMES , *HEMOLYTIC anemia , *ADULTS , *DIAGNOSIS of escherichia coli diseases , *TREATMENT of escherichia coli diseases , *HEMOLYTIC-uremic syndrome treatment , *HEMOLYTIC-uremic syndrome diagnosis , *COLONOSCOPY , *SEIZURES (Medicine) , *ESCHERICHIA coli , *ESCHERICHIA coli diseases , *FLUID therapy , *GASTROINTESTINAL hemorrhage , *HEMOLYTIC-uremic syndrome , *PLASMA exchange (Therapeutics) , *SPASMS , *TRACHEA intubation , *DISEASE complications - Abstract
Background: Haemolytic uraemic syndrome is a rarely seen in adults often leading to critical illness. This case highlights how difficult it can be to establish a diagnosis and treat when a patient presents with bloody diarrhoea.Case Presentation: A 17-year-old Iraqi man presented to the emergency department with abdominal pain and bloody diarrhoea. He was initially treated as acute appendicitis, undergoing an appendectomy but following a recurrence in his symptoms a colonoscopy was performed. A diagnosis of shiga toxin-producing Escherichia coli leading to HUS was suspected following histology obtained at colonoscopy and this was confirmed on antibody testing. Despite intravenous fluids and supportive therapy the patient's symptoms and condition deteriorated. He developed seizures and acute renal failure requiring intubation and plasma exchange in the intensive care setting. He eventually required treatment with ecluzimab therapy; a monoclonal antibody and subsequently made a full recovery.Conclusions: Haemolytic uraemic syndrome is a triad of progressive renal failure, thrombocytopenia and haemolytic anaemia which is a condition rarely seen in adults. It is usually associated with an E. coli infection and supportive therapy remains the mainstay of treatment. [ABSTRACT FROM AUTHOR]- Published
- 2019
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25. Enteropathogenic (EPEC) and Shigatoxigenic Escherichia coli (STEC) in broiler chickens and derived products at different retail stores
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Paula Maria Alejandra Lucchesi, Alberto E. Parma, Nora Lía Padola, Mónica Zulema Alonso, and Edgardo Rodríguez
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animal structures ,Biology ,medicine.disease_cause ,Microbiology ,fluids and secretions ,Otras Ciencias Veterinarias ,medicine ,Infant diarrhea ,Food science ,Escherichia coli ,Intimin ,EPEC ,SHIGA-TOXIN ,Ciencias Veterinarias ,Broiler ,Shiga toxin ,CHICKEN PRODUCTS ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,STEC ,PCR ,CIENCIAS AGRÍCOLAS ,biology.protein ,bacteria ,INTIMIN ,Food Science ,Biotechnology - Abstract
Enteropathogenic (EPEC) and Shigatoxigenic Escherichia coli (STEC) are foodborne pathogens that cause potentially fatal infant diarrhea and hemolytic uremic syndrome, respectively. We investigated the presence of intimin and Shiga toxin encoding genes, as indicators of EPEC and STEC presence in cloacae and chicken products. The analyzed products were hamburgers, giblets and carcasses obtained from poultry and butcher shops. EPEC contamination predominated over STEC contamination in cloacae and chicken products, although some differences were detected when the kind of food or shop was taken into account. In particular, among chicken hamburgers we found a greater proportion of EPEC than STEC-positive samples at poultry shops, while in butcheries STEC was predominant. This finding could suggest cross contamination during handling at butcheries. The results indicate that it is necessary to improve hygienic measures both during slaughtering and manipulation of chicken products at retail stores, to provide a safe product to consumers. Fil: Alonso, Mónica Zulema. Universidad Nacional del Centro de la Provincia de Buenos Aires. Facultad de Ciencias Veterinarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Lucchesi, Paula Maria Alejandra. Universidad Nacional del Centro de la Provincia de Buenos Aires. Facultad de Ciencias Veterinarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Rodriguez, Edgardo Mario. Universidad Nacional del Centro de la Provincia de Buenos Aires. Facultad de Ciencias Veterinarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Parma, Alberto Ernesto. Universidad Nacional del Centro de la Provincia de Buenos Aires. Facultad de Ciencias Veterinarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Padola, Nora Lía. Universidad Nacional del Centro de la Provincia de Buenos Aires. Facultad de Ciencias Veterinarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
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- 2012
26. Presence of a human diarrheagenic escherichia coli clone in captivity kept psittacidaes
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Josias Rodrigues, Sílvia Maria de Almeida, Guilherme Augusto Marietto-Gonçalves, Universidade Estadual Paulista (Unesp), and Floravida Institute
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Shiga-toxin ,chloramphenicol ,psittacine ,antibiotic resistance ,diarrhea ,tspE4 C2 gene ,medicine.disease_cause ,Intergenic region ,Parrots ,antibiotic agent ,Bacteria (microorganisms) ,biology ,chuA gene ,Shiga toxin ,enteropathogenic Escherichia coli ,Enterobacteriaceae ,unclassified drug ,priority journal ,yjaA gene ,sulfamycin ,parrots ,genetic marker ,bacterial gene ,enrofloxacin ,Aves ,medicine.drug ,diarrheagenic Escherichia coli ,Diarrhea ,streptomycin ,Tetracycline ,Shiga toxin producing Escherichia coli ,enteroaggregative Escherichia coli ,bacterium culture ,gentamicin ,Article ,cloaca ,Microbiology ,animal tissue ,parakeets ,ciprofloxacin ,medicine ,Escherichia coli ,trimethoprim ,controlled study ,Enteropathogenic Escherichia coli ,Psittacidae ,tetracycline ,clone ,nonhuman ,General Immunology and Microbiology ,bacterium isolate ,Parakeets ,pathotype ,biology.organism_classification ,bacterial strain ,Virology ,Genetic marker ,Enteroaggregative Escherichia coli ,biology.protein - Abstract
Submitted by Vitor Silverio Rodrigues (vitorsrodrigues@reitoria.unesp.br) on 2014-05-27T11:25:57Z No. of bitstreams: 0Bitstream added on 2014-05-27T14:36:19Z : No. of bitstreams: 1 2-s2.0-79961068787.pdf: 846743 bytes, checksum: 44ff5a4c4c6011063fd4120ed61ea6e2 (MD5) Made available in DSpace on 2014-05-27T11:25:57Z (GMT). No. of bitstreams: 0 Previous issue date: 2011-08-08 Bacterial cultures of cloaca swabs from 86 captivity kept psittacidaes revealed 17 Escherichia coli bearing birds sharing strains which, on the basis of enterobacterial repetitive intergenic consensus (ERIC) PCR analysis, proved to be genetically similar. Further, triplex PCR specific for the genetic markers chuA, yjaA, and TSPE4.C2 was used to assign the strains to the E. coli reference collection (EcoR) B2 group. One strain of each, from the enteropathogenic (EPEC), enteroaggregative (EAEC) and Shiga toxin (STEC) E. coli pathovars were found among these isolates. © Marietto-Gonçalves et al.; Licensee Bentham Open. Department of Microbiology and Immunology Institute of Bioscience of the São Paulo State University in Botucatu, ZIP 18618-970, Botucatu SP Floravida Institute, Botucatu SP Department of Microbiology and Immunology Institute of Bioscience of the São Paulo State University in Botucatu, ZIP 18618-970, Botucatu SP
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- 2011
27. Pathogenic potential and horizontal gene transfer in ovine gastrointestinal Escherichia coli
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Jannice Schau Slettemeås, H. Solheim, Camilla Sekse, Yngvild Wasteson, D. Döpfer, Lothar Beutin, Anne Margrete Urdahl, F.J. van der Wal, and A.G. de Boer
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Serotype ,Gene Transfer, Horizontal ,Genotype ,Virulence ,Minisatellite Repeats ,shiga-toxin ,Multiple Loci VNTR Analysis ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,Coliphages ,Microbiology ,variable-number ,strains ,chemistry.chemical_compound ,Shiga-like toxin ,CVI - Divisie Virologie ,medicine ,Escherichia coli ,Animals ,Humans ,toxin 2-encoding bacteriophage ,Serotyping ,intimin types ,Phylogeny ,vivo transduction ,Host Pathogen Interaction & Diagnostics ,Genetics ,Sheep ,biology ,Bacteriologie ,Genetic transfer ,virulence genes ,Bacteriology ,Shiga toxin ,General Medicine ,Bacteriology, Host Pathogen Interaction & Diagnostics ,bacterial infections and mycoses ,Host Pathogen Interactie & Diagnostiek ,Variable number tandem repeat ,serotypes ,chemistry ,cattle ,Bacteriologie, Host Pathogen Interactie & Diagnostiek ,biology.protein ,serogroup o157 ,CVI - Division Virology ,Biotechnology - Abstract
Aims: To demonstrate that a thorough characterization and virulotyping of Escherichia coli strains isolated from sheep over time leads to new insights into ovine E. coli potentially becoming human pathogens through horizontal gene transfer. Methods and Results: One hundred and fifty E. coli isolates from two sheep, sampled over 3 weeks, were characterized by serotyping, virulotyping, genotyping using multiple locus variable number tandem repeats analysis (MLVA) and susceptibility to phage infection in vitro. The 35 MLVA profiles and the serotype and virulotypes of the strains were closely associated. Many MLVA profiles differed in one locus independent of serotypes. Escherichia coli isolates of the same serotype or virulotype had identical or very similar MLVA profiles. No transductants that incorporated the bacteriophages were found in vivo, but six E. coli isolates were susceptible to the phage infection in vitro. Changes in MLVA profiles were seen after acquisition of Stx phages in vitro only. Conclusions: The sheep carried Stx phage susceptible E. coli that possessed virulence markers associated with human pathogenicity. Changes in bacterial genomes by phage transfer may complicate outbreak source investigations. Serotype has to be taken into account when evaluating strain relationships by MLVA. Significance and Impact of the Study: Sheep carry E. coli that encode for virulence markers and belong to serogroups known to be human pathogens. In addition, a selection of isolates was found to be susceptible to horizontal transfer of Shiga toxin genes by means of bacteriophages in vitro, and the transfer resulted in a discernible change of the MLVA patterns of E. coli.
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- 2010
28. Geno-phenotypic characterization of AEEC Escherichia coli isolated from children with infectious diarrhea in La Paz: Epidemiology and diagnostic implications
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Paola Ropmecin, Luis Miguel Guachalla, Samanta Sanchez, and Volga Iñiguez
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Shiga-toxin ,Bundlina ,Bundlina (BFP) ,Pediatrics, Perinatology and Child Health ,Intimina (EAE) ,Escherichia coli ,acute diarrhea ,Adherencia y esfacelación (EA) ,Attaching and effacing ,Intimin ,Toxina Shiga (STX) ,diarrea aguda - Abstract
En el presente estudio se realizó la caracterización de Escherichia coli Enteropatogénica (EPEC) y Escherichia coli Enterohemorrágica (EHEC), dos categorías patogénicas de E. coli, causantes de la lesión de adherencia y esfacelación (EAEE), en muestras de heces diarreicas de niños menores a 5 años. Método: El perfil patogénico de EAEE se realizó mediante el análisis por PCR, de los genes intimina (eae), bundlina (bfpA) y toxinas siga (stx1 y stx2). Estas pruebas, se complementaron con ensayos fenotípicos de la resistencia a antibióticos, fermentación de sorbitol y producción de ?-D-glucoronidasa. Resultados: La prevalencia de EAEE fue del 7% con preponderancia de las cepas EPEC (95%) sobre EHEC. Se encontró una mayor proporción (83%) de cepas EPEC atípicas que típicas. Un alto porcentaje de los aislados de EPEC es resistente a más de 5 antibióticos analizados. La frecuencia de multiresistencia a bloques de 5 y 2 antibióticos sugiere que la resistencia es transmisible por vía horizontal. La correlación entre la pertenencia a un serogrupo particular de EPEC y las características genotípicas, mostró heterogeneidad en el perfil de patogenicidad tanto entre un mismo como entre diferentes serogrupos, demostrando que el diagnóstico de DEC mediante serotipificación no es útil en nuestro medio. Los aislados de EHEC, se caracterizan por presentar una marcada susceptibilidad a los antibióticos. Se reporta la presencia de los serogrupos O157 y O6. Conclusiones: Este estudio, constituye el primer reporte en nuestro medio sobre la determinación y caracterización geno-fenotípica de EPEC y EHEC por métodos moleculares. En conjunto, los datos obtenidos tienen relevancia para el diagnóstico, tratamiento y estudio de la epidemiología de AEEC en las EDA en Bolivia Enteropathogenic (EPEC) and enterohemorrhagic (EHEC) Escherichia coli that produce attaching and effacing lesions were isolated and characterized from children under 5 years-old with diarrhea. Method: AEEC pathogenic profile was analyzed by PCR searching the presence of Intimin (eae), bundle-forming pilus (bfpa) and Shiga-toxin (stx 1 - stx2) genes. Phenotypic analysis for the presence of antibiotic multiple resistance, sorbitol fermentation and B-D glucorunidase was also performed. Results: AEEC prevalence was 7% and EPEC accounted for 95% of isolates (83% atypical). A high percentage of EPEC isolates are resistant to more than 5 antibiotics, suggesting resistance transmission by lateral transfer. The lack of correlations between EPEC serogroups and genotypic strain profile demonstrates that serological DEC diagnosis is not useful for local isolates. EHEC isolates were susceptible to most of the antibiotics tested. The isolation of 0157 and 06 serogroups is reported. Conclusions: First report of EPEC and EHEC molecular strain characterization. The results described are relevant for EAEE diagnosis, treatment and epidemiology of diarrhea in Bolivia
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- 2006
29. Untersuchungen zur Evolution von nicht-O157-STEC-Stämmen
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Eigenbrod, Karen Ylva Gertrud
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Phylogenie ,600 Technik, Medizin, angewandte Wissenschaften::630 Landwirtschaft::630 Landwirtschaft und verwandte Bereiche ,Evolution ,Virulenz ,Escherichia coli ,Shiga-Toxin - Abstract
Deckblatt Inhaltsverzeichnis Einführung 5 Elektrophorese und das Paradebeispiel der Klonalität 9 Gensequenzen 12 das Spezies-Problem 15 Eigene Arbeiten 17 Material 17 Bakterienstämme 17 Nährmedien 19 Oligonukleotide 20 vorgefertigte Reagenzien 24 Methoden 26 Isolierung von Nukleinsäuren 26 Konzentrationsbestimmung von Nukleinsäuren 28 Polymerase-Ketten-Reaktion (PCR) 30 Elektrophoretische Analyse von Nukleinsäuren 31 Hybridisierung 31 DNA-Sequenzanalyse 31 Computergestützte Datenanalyse - Datensatzanalyse 32 Eigene Ergebnisse 33 DNA-Sequenzanalyse 33 Sequenzlänge 33 Anzahl der Variationen bei den folgenden Stämmen 33 Housekeeping-Gene 34 PCR-Elektropherogramm (Beispielhaft für alle weiteren Gene) 35 Nachweis des cadB-Gens mittels Dot-Blot-Hybridisierung 36 Virulenzassoziierte Gene 37 Phylogenetische Analysen 44 Houskeeping-Gene 44 Virulenzassoziierte Gene 56 Diskussion 100 Zusammenfassung 114 Summary 116 Abbildungsverzeichnis 118 Tabellenverzeichnis 118 Nachweis der verwendeten Quellen 119 Danksagung 134, In der vorliegenden Arbeit wurden mittels Multilocus-Sequenz-Typisierung (MLST) die Verwandtschaftsverhältnisse von 25 bovinen Nicht-O157:H7 -Shigatoxin-bildenden Escherichia coli (STEC) -Stämmen bestimmt und mit einem O157:H7-Stamm sowie dem E. coli K12-Referenzstamm MG1655 verglichen. Für die phylogenetischen Untersuchungen wurden einerseits die vier Housekeeping-Gene cadB (442 bp), mdh (810 bp), putP (483 bp) und trpC (420 bp) partiell sequenzanalysiert. Weiterhin wurden Gene des über horizontalen Gentransfer erworbenen Locus of Enterocyte Effacement (LEE) analysiert, und zwar die hochvariablen Virulenzgene eae (895 bp) und espB (374 bp). Anhand der Daten wurden Kladogramme erstellt, deren Vertrauenswürdigkeit durch eine kombinierte Analyse in einem Maximum-Parsimonie-Baum (MPT) visualisiert wurde. Ziel der Untersuchungen war es, die mögliche Entwicklungsgeschichte dieser LEE- positiven bovinen STEC-Stämme nachzuzeichnen. Die Analyse der Housekeeping-Gene erbrachte das Vorhandensein von möglicherweise sechs verschiedenen Clustern. Eine endgültige Clusterbestimmung hätte die Sequenzanalyse weiterer Housekeeping-Gene sowie einen größeren Datensatz erfordert. Bezüglich der Virulenzgene stimmten die phylogenetischen Daten der espB und eae-Gene weitestgehend überein, was als Hinweis auf deren Co-Evolution gewertet wird. Weiterhin zeigte sich eine absolute Assoziation zwischen den 8 verschiedenen nachgewiesenen Intimintypen und der phylogenetischen Verwandtschaft der Stämme. Demnach kann das Intimin als phylogenetischer Marker gewertet werden. Die aus der Analyse der Housekeeping-Gene getroffene phylogenetische Entwicklung der Stämme wurde weiterhin in Einklang gebracht mit den Daten der LEE-assoziierten Gene, um einen möglichen Zeitpunkt der Übertragung des LEE abschätzen zu können. Aufgrund der geringen Zahl untersuchter Gene konnte keine endgültige Hypothese erstellt werden, allerdings sprechen die Daten eher dafür, dass der LEE mehrfach und unabhängig voneinander in verschiedene E. coli-Phylotypen inserierte. Nach Integration des LEE in das jeweilige E. coli- Chromosom fand dann die jeweilige Weiterentwicklung des LEE statt, die anhand der Gene eae und espB analysiert wurde. Die unterschiedlichen Entwicklungen finden in den deutlichen Sequenzgrößen- und Sequenzfolgen-Unterschieden einen klaren Ausdruck. Sie enthüllten Clusterbildungen bei den Housekeeping-Genen, die durch unterschiedliche Mutationen über die Zeit entstanden sein müssen. Daraus wird der Schluss gezogen, dass es sich um wenigstens fünf, mutmaßlich jedoch sogar sechs, verschiedene Cluster handelt, die nur zum Teil die Einteilung durch Whittam (Whittam, 1998) und Reid (Reid et al., 1999; Reid et al., 2000), über die MLEE (Selander and Lewin, 1980; Selander et al., 1986) bestätigen. Diese Cluster spiegeln sich auch in denen der Virulenzgene wieder, so dass davon ausgegangen werden kann, dass es sich jeweils um eine unabhängige Aufnahme eines LEE, aber unterschiedliche Weiterentwicklung seit diesem Zeitpunkt handelt. Die deutlichsten Veränderungen, die sich am zeta- Cluster zeigten, könnten auf einem relativ höheren Selektionsdruck beruhen, oder aber auch einfach dadurch zustande gekommen sein, dass sie eine längere Zeit der Entwicklung hatten, also schlichtweg älter sind. Diese Hypothesen müssen in umfangreicheren zukünftigen Untersuchungen belegt bzw. widerlegt werden. Zur Darstellung einer Zeitskala fehlen geeignete sog. "Outgroups", so dass die Trennungszeiten der einzelnen Klone nicht geschätzt werden können. Somit ist auch keine Aussage darüber möglich, welcher Klon sich von welchem Ursprungsklon zu welchem Zeitpunkt getrennt hat. Die Analysen deuten jedoch darauf hin, dass der LEE mehrfach und zu unterschiedlichen Zeiten von den einzelnen Klonen aufgenommen worden ist., This thesis describes the determination of the relationships between of 25 bovine non-O157:H7 Shiga toxin-producing Escherichia coli (STEC) strains by multilocus sequence typing (MLST) and compared with an O157:H7 strain and the E. coli K12 reference strain MG1655. For the phyologenetic analyses the four housekeeping genes cadB (442 bp), mdh (810 bp), putP (483 bp) and trpC (420 bp) were subjected to partial sequence analysis. Genes of the locus of enterocyte effacement (LEE) acquired by horizontal gene transfer, i.e. the highly variable virulence genes eae (895 bp) and espB (275 bp) were also analysed. Cladograms were established on the basis of the data obtained. The reliability of the cladograms was visualised by means of a combined analysis in a maximum parsimony tree (MPT). The aim of the investigations was to trace the possible developmental history of these LEE-positive bovine STEC strains. The analysis of the housekeeping genes revealed the presence of possibly six different clusters. Sequence analysis of further housekeeping genes and a larger amount of data would have been necessary to arrive a final determination of the clusters. As regards the virulence genes, the phylogenetic data on the espB were more or less the same as those of the eae gene, which can be taken as an indication of their co-evolution. There was also an absolute association between the 8 different types of intimin identified and the phylogenetic relationships between the strains. Intimin can thus be considered to be a phylogenetic marker. The phylogenetic development of the strains as established by the analysis of the housekeeping genes was also compared with the data on the LEE-associated genes, in order to be able to estimate the time at which the LEE may have been transferred. Owing to the small number of genes investingated it was not possible to arrive at a final hypothesis, however, from the data it would appear that the LEEs were inserted several times in different E. coli phylotypes, independently of each other. The further development of the respective LEEs took place following integration of the LEE in the respective E. coli chromosomes and they were then analysed separately for the genes eae and espB. The differences between their developments are clearly reflected in the pronounced differences in sequence size and sequence order. Thus, they revealed the formation of clusters of the housekeeping genes which must have developed as a result of different mutations over time. This led to the conclusion that there are at least five, probably even six different clusters which only partly confirm the serotypes established by Wittam (Whittam, 1998) and Reid (Reid et al., 1999; Reid et al., 2000) the aid of MLEE (Selander and Lewin, 1980; Selander et al., 1986). These clusters are also reflected in the virulence genes and it can thus be assumed that each strain inserts an LEE independently of the others, but that its development takes a different course from this time onwards. The most pronounced changes revealed in the zeta cluster may have been attributable to a relatively higher selection pressure or have come about purely because they needed longer to develop, i.e. were simply older. More comprehensive research is needed to confirm or reject these hypotheses. The "outgroups" that would be required to represent a time scale do not exist and it was thus not possible to estimate the separation times of the individual clones. It is therefore also not possible to establish which clone separated from which progenitor clone at which point in time. However, the results of the analyses indicate that the LEE was inserted by the individual clones at several different times.
- Published
- 2006
- Full Text
- View/download PDF
30. Prevalence estimation and risk factors for Escherichia coli O157 on Dutch dairy farms
- Author
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A.W. van de Giessen, M Bouwknegt, Klaas Frankena, J.M. Schouten, Elisabeth A.M. Graat, and M.C.M. de Jong
- Subjects
DNA, Bacterial ,ID - Infectieziekten ,Veterinary medicine ,Pooled Sample ,Cross-sectional study ,animal diseases ,Kwantitatieve Veterinaire Epidemiologie ,Cattle Diseases ,netherlands ,shiga-toxin ,Biology ,Logistic regression ,medicine.disease_cause ,Escherichia coli O157 ,manure slurry ,survival ,Feces ,Animal science ,Food Animals ,Risk Factors ,Surveys and Questionnaires ,medicine ,Prevalence ,Animals ,Escherichia coli ,Escherichia coli Infections ,Dairy herds ,transmission ,Sampling (statistics) ,Quantitative Veterinary Epidemiology ,infection ,Dairying ,Cross-Sectional Studies ,cattle ,Herd ,WIAS ,Animal Science and Zoology ,Female ,herd - Abstract
To estimate the prevalence of Escherichia coli O157 on Dutch dairy herds, faecal samples were collected once from 678 randomly selected dairy farms in the period October 1996-December 2000. Samples were cultured for E. coli O157. Thirty-eight isolates were tested for virulence genes (eae, VT1 and VT2). A questionnaire about farm characteristics was taken from the farm manager, resulting in variables that could be analysed to identify and quantify factors associated with presence of E. coli O157. In total, 49 of the 678 herds (7.2%) showed at least one positive pooled sample. E. coli O157 was not isolated from herds sampled in December-April in consecutive years (except for one isolate found in March, 2000). VT- and eae-genes were found in 37 and 38 isolates, respectively. Logistic regression was performed on variables obtained from the questionnaire, comparing E. coli O157-positive herds to negative herds. To account for season, a sine function was included in the logistic regression as an offset variable. In the final model, the presence of at least one pig at the farm (OR = 3.4), purchase of animals within the last 2 years before sampling (OR = 1.9), supply of maize (OR = 0.29) to the cows, and sampling a herd in the year 1999 or 2000 (compared to sampling in 1998; OR = 2.1 and 2.9, respectively) had associations with the presence of E. coli O157.
- Published
- 2004
31. Escherichia coli O157 prevalence in Dutch poultry, pig finishing and veal herds and risk factors in Dutch veal herds
- Author
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M.C.M. de Jong, Klaas Frankena, Elisabeth A.M. Graat, J.M. Schouten, and A.W. van de Giessen
- Subjects
ID - Infectieziekten ,Veterinary medicine ,Time Factors ,Cross-sectional study ,Swine ,animal diseases ,Kwantitatieve Veterinaire Epidemiologie ,Cattle Diseases ,shiga-toxin ,Biology ,Logistic regression ,medicine.disease_cause ,Escherichia coli O157 ,Poultry ,Animal science ,Food Animals ,Risk Factors ,medicine ,Prevalence ,Animals ,Escherichia coli ,Escherichia coli Infections ,Poultry Diseases ,Netherlands ,Swine Diseases ,outbreak ,Campylobacter ,Broiler ,association ,Outbreak ,Quantitative Veterinary Epidemiology ,dairy farms ,colonization ,infection ,cattle ,Herd ,WIAS ,hemolytic uremic syndrome ,Animal Science and Zoology ,Cattle ,Flock - Abstract
In the period October 1996 through December 2000, a total of 7163 pooled faecal samples of laying hen and broiler flocks, finishing-pig herds and veal herds were examined for the presence of Salmonella spp., Campylobacter spp. and verocytotoxin-producing Escherichia coli O157 as part of a national monitoring programme in The Netherlands. Isolates were tested for eae and VT genes. Risk factors for Dutch veal herds were quantified. For all herd/flock types, faecal samples were cultured for E. coli O157. Of broiler flocks, laying flocks and finishing pig herds, respectively, 1.7%, 0.5% and 0.4% were E. coli O157 positive. In total, 42 of the 454 veal herds (9.3%) showed at least one positive pooled sample. E. coli O157-positive herds were compared (with logistic regression) to negative herds, regarding variables obtained from the questionnaire taken from the farm manager. To account for season, a sine function was included in the logistic regression as offset variable. In the final model, 'pink-veal production' (compared to white-veal production), 'group housing of the sampled herd' (compared to individual housing), 'more than one stable present' (compared to one stable present), 'hygienic measures regarding visitors' (compared to no hygienic measures), 'interval arrival-sampling of a herd of >20 weeks' (compared to < or =10 weeks), and 'presence of other farms within 1 km' (compared to no presence of farms
- Published
- 2003
32. Prevalence of Shiga-toxigenic Escherichia coli in House Flies (Diptera: Muscidae) in an Urban Environment
- Author
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Pohlenz, Tyler D., Zavadilova, Klara, Ghosh, Anuradha, and Zurek, Ludek
- Published
- 2017
- Full Text
- View/download PDF
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