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Ocean biological processes play an important role in the global carbon cycle via the production of organic matter and its subsequent export. Often, this flux is assumed to be in steady state; however, it is dependent on nutrients introduced to surface waters via multiple mechanisms, some of which are likely to exhibit both intra‐annual and interannual variability leading to comparable variability in ocean carbon uptake. Here we test this variability using surface (5 m) inorganic nutrient concentrations from voluntary observing ships and satellite‐derived estimates of chlorophyll and net primary production. At lower latitudes, the seasonality is small, and the monthly averages of nitrate:phosphate are lower than the canonical 16:1 Redfield ratio, implying nitrogen limitation, a situation confirmed via a series of nutrient limitation experiments conducted between Bermuda and Puerto Rico. The nutrient seasonal cycle is more pronounced at higher latitudes, with clear interannual variability. Over a large area of the midlatitude North Atlantic, the winters of 2009/2010 and 2010/2011 had nitrate values more than 1μmol L−1 higher than the 2002–2017 average, suggesting that during this period, the system may have shifted to phosphorus limitation. This nitrate increase meant that, in the region between 31° and 39° N, new production calculated from nitrate uptake was 20.5g C m−2 in 2010, more than four times higher than the median value of the whole observing period. Overall, we suggest that substantial variability in nutrient concentrations and biological carbon uptake occurs in the North Atlantic with interannual variability apparent over a number of different time scales.

Previous work has not led to a clear understanding of the causes of spatial pattern in global surface ocean dissolved inorganic carbon (DIC), which generally increases polewards. Here, we revisit this question by investigating the drivers of observed latitudinal gradients in surface salinity-normalized DIC (nDIC) using the Global Ocean Data Analysis Project version 2 (GLODAPv2) database. We used the database to test three different hypotheses for the driver producing the observed increase in surface nDIC from low to high latitudes. These are (1) sea surface temperature, through its effect on the CO2 system equilibrium constants, (2) salinity-related total alkalinity (TA), and (3) high-latitude upwelling of DIC- and TA-rich deep waters. We find that temperature and upwelling are the two major drivers. TA effects generally oppose the observed gradient, except where higher values are introduced in upwelled waters. Temperature-driven effects explain the majority of the surface nDIC latitudinal gradient (182 of the 223 µmol kg−1 increase from the tropics to the high-latitude Southern Ocean). Upwelling, which has not previously been considered as a major driver, additionally drives a substantial latitudinal gradient. Its immediate impact, prior to any induced air–sea CO2 exchange, is to raise Southern Ocean nDIC by 220 µmol kg−1 above the average low-latitude value. However, this immediate effect is transitory. The long-term impact of upwelling (brought about by increasing TA), which would persist even if gas exchange were to return the surface ocean to the same CO2 as without upwelling, is to increase nDIC by 74 µmol kg−1 above the low-latitude average.

Knowledge of the surface ocean dynamics and the underlying controlling mechanisms is critical to understand the natural variability of the ocean and to predict its future response to climate change. In this paper, we highlight the potential use of Volunteer Observing Ship (VOS), as carrier for automatic underway measuring system and as platform for sample collection, to enhance the observing capacity for the surface ocean. We review the concept, history, present status and future development of the VOS-based in situ surface ocean observation. The successes of various VOS projects demonstrate that, along with the rapid advancing sensor techniques, VOS is able to improve the temporal resolution and spatial coverage of the surface ocean observation in a highly cost-effective manner. A sustained and efficient marine monitoring system in the future should integrate the advantages of various observing platforms including VOS.

Shelf seas play an important role in the global carbon cycle, absorbing atmospheric carbon dioxide (CO2) and exporting carbon (C) to the open ocean and sediments. The magnitude of these processes is poorly constrained, because observations are typically interpolated over multiple years. Here, we used 298500 observations of CO2 fugacity (fCO2) from a single year (2015), to estimate the net influx of atmospheric CO2 as 26.2 ± 4.7 Tg C yr−1 over the open NW European shelf. CO2 influx from the atmosphere was dominated by influx during winter as a consequence of high winds, despite a smaller, thermally-driven, air-sea fCO2 gradient compared to the larger, biologically-driven summer gradient. In order to understand this climate regulation service, we constructed a carbon-budget supplemented by data from the literature, where the NW European shelf is treated as a box with carbon entering and leaving the box. This budget showed that net C-burial was a small sink of 1.3 ± 3.1 Tg C yr−1, while CO2 efflux from estuaries to the atmosphere, removed the majority of river C-inputs. In contrast, the input from the Baltic Sea likely contributes to net export via the continental shelf pump and advection (34.4 ± 6.0 Tg C yr−1).

The magnitude of marine plankton net community production (NCP) is indicative of both the biologically driven exchange of carbon dioxide between the atmosphere and the surface ocean and the export of organic carbon from the surface ocean to the ocean interior. In this study the seasonal variability in the NCP of five biogeochemical regions in the North Atlantic was determined from measurements of surface water dissolved oxygen and dissolved inorganic carbon (DIC) sampled from a Volunteer Observing Ship (VOS). The magnitude of NCP derived from dissolved oxygen measurements (NCPinline image) was consistent with previous geochemical estimates of NCP in the North Atlantic, with an average annual NCPinline image of 9.5 ± 6.5 mmol O2 m−2 d−1. Annual NCPinline image did not vary significantly over 35° of latitude and was not significantly different from NCP derived from DIC measurements (NCPDIC). The relatively simple method described here is applicable to any VOS route on which surface water dissolved oxygen concentrations can be accurately measured, thus providing estimates of NCP at higher spatial and temporal resolution than currently achieved.

The North Atlantic is characterized by diatom-dominated spring blooms that results in significant transfer of carbon to higher trophic levels and the deep ocean. These blooms are terminated by limiting silicate concentrations in summer. Numerous regional studies have demonstrated phytoplankton community shifts to lightly-silicified diatoms and non-silicifying plankton at the onset of silicate limitation. However, to understand basin-scale patterns in ecosystem and climate dynamics, nutrient inventories must be examined over sufficient temporal and spatial scales. Here we show, from a new comprehensive compilation of data from the subpolar Atlantic Ocean, clear evidence of a marked pre-bloom silicate decline of 1.5-2 mu M throughout the winter mixed layer during the last 25 years. This silicate decrease is primarily attributed to natural multi-decadal variability through decreased winter convection depths since the mid-1990s, a weakening and retraction of the subpolar gyre and an associated increased influence of nutrient-poor water of subtropical origin. Reduced Arctic silicate import and the projected hemispheric-scale climate change-induced weakening of vertical mixing may have acted to amplify the recent decline. These marked fluctuations in pre-bloom silicate inventories will likely have important consequences for the spatial and temporal extent of diatom blooms, thus impacting ecosystem productivity and ocean-atmosphere climate dynamics., This work was initiated through the Nordic Council of Ministers project (AEG-11323). H.H. is supported by the European Union 7th Framework Programme (n. 308299 NACLIM www.naclim.eu), the EU Horizon 2020 Blue-Action project (BG-10-2016, www.blue-action.eu) and the Danish project NAACOS 10-093903/DSF. R.S. is supported by a Marie Curie Clarin Cofund Grant (ACB-1431). S.P. was funded by the Danish government through the research center 'Climate and oceanographic changes in the marine area between Greenland and Faroes - Influences on plankton and fish'. C.J. was funded under the European Union's Horizon 2020 research and innovation under grant agreement No. 678760 (ATLAS). This output reflects only the author's view and the European Union cannot be held responsible for any use that may be made of the information contained therein. Funding information on the model simulations and the observation programs is given in the Supplementary Information 1. The model simulations were supported by the co-operative project "RACE - Regional Atlantic Circulation and Global Change" funded by the German Federal Ministry for Education and Research (BMBF). We thank Solva Jacobsen for providing the Faroe Shelf silicate record.

A key challenge in oceanography is to capture and quantify processes that happen on short time scales, seasonal changes and inter-annual variations. To address this problem the P&O European Ferries Ltd. Ship MV Pride of Bilbao was fitted with a FerryBox from 2002 to 2010 and data returned to NOC in real time providing near continuous measurements between UK (Portsmouth) and Spain (Bilbao) of temperature, salinity, chlorophyll-fluorescence and oxygen. Additional monthly samples were collected on manned crossings. Over 6000 samples were analysed for nitrate (nitrate and nitrite) concentrations. The timing of nitrate concentration increases (with winter mixing) and decreases (with the spring bloom) are different on and off shelf and in autumn nitrate concentrations remain high on the shelf. Off shelf in the Bay of Biscay, the mixed layer depth assessed using Argo floats, was found to vary from 212 m in relatively mild winters (such as 2007/2008) to 476 m in cold winters (2009/2010). Years with deeper mixing were associated with an increase in nitrate concentrations in the surface waters (~3 µmol l-) and the increased vertical nutrient supply resulted in higher productivity the following spring. Bloom progression could be seen through the increase in oxygen anomaly and decrease in nitrate concentrations off shelf prior to changes further north on the shelf and phytoplankton growth was initiated as shoaling begins. The full dataset demonstrates that ships of opportunity, particularly ferries with consistently repeated routes, can deliver high quality in situ measurements over large time and space scales that currently cannot be delivered in any other way.

We present over 900 carbonate system observations collected over four years (2007–2010) in the Western English Channel (WEC). We determined CO2 partial pressure (pCO2), Total Alkalinity (TA) and Dissolved Inorganic Carbon (DIC) along a series of 40 km transects, including two oceanographic stations (L4 and E1) within a sustained coastal observatory. Our data follow a seasonal pattern of CO2 undersaturation from January to August, followed by supersaturation in September–October and a return to near-equilibrium thereafter. This pattern is explained by the interplay of thermal and biological sinks in winter and spring–summer, respectively, followed by the breakdown of stratification and mixing with deeper, high-CO2 water in autumn. The drawdown of DIC and inorganic N between March and June with a C:N ratio of 8.7–9.5 was consistent with carbon over-consumption during phytoplankton growth. Monthly mean surface pCO2 was strongly correlated with depth integrated chlorophyll a highlighting the importance of subsurface chlorophyll a maxima in controlling C-fluxes in shelf seas. Mixing of seawater with riverine freshwater in near-shore samples caused a reduction in TA and the saturation state of calcite minerals, particularly in winter. Our data show that the L4 and E1 oceanographic stations were small, net sinks for atmospheric CO2 over an annual cycle (−0.52±0.66 mol C m−2 y−1 and −0.62±0.49 mol C m−2 y−1, respectively).

Hartman, S. E., Lampitt, R. S., Larkin, K. E., Pagnani, M., Campbell, J., Gkritzalis, T., Jiang, Z.-P., Pebody, C. A., Ruhl, H. A., Gooday, A. J., Bett, B. J., Billett, D. S. M., Provost, P., McLachlan, R., Turton, J. D., and Lankester, S. 2012. The Porcupine Abyssal Plain fixed-point sustained observatory (PAP-SO): variations and trends from the Northeast Atlantic fixed-point time-series. – ICES Journal of Marine Science, 69: 776–783. The Porcupine Abyssal Plain sustained observatory (PAP-SO) in the Northeast Atlantic (49°N 16.5°W; 4800 m) is the longest running open-ocean multidisciplinary observatory in the oceans around Europe. The site has produced high-resolution datasets integrating environmental and ecologically relevant variables from the surface to the seabed for >20 years. Since 2002, a full-depth mooring has been in place with autonomous sensors measuring temperature, salinity, chlorophyll-a fluorescence, nitrate, and pCO2. These complement ongoing mesopelagic and seabed observations on downward particle flux and benthic ecosystem structure and function. With national and European funding, the observatory infrastructure has been advanced steadily, with the latest development in 2010 involving collaboration between the UK's Meteorological Office and Natural Environment Research Council. This resulted in the first simultaneous atmospheric and ocean datasets at the site. All PAP-SO datasets are open access in near real time through websites and as quality-controlled datasets for a range of remote users using ftp sites and uploaded daily to MyOcean and the global telecommunications system for use in modelling activities. The combined datasets capture short-term variation (daily–seasonal), longer term trends (climate-driven), and episodic events (e.g. spring-bloom events), and the data contribute to the Europe-wide move towards good environmental status of our seas, driven by the EU's Marine Strategy Framework Directive (http://ec.europa.eu/environment/water/marine).

A critical factor controlling changes in the acidity of coastal waters is the alkalinity of the water. Concentrations of alkalinity are determined by supply from rivers and by in situ processes such as biological production and denitrification. A 2-year study based on 15 cruises in Liverpool Bay followed the seasonal cycles of changing concentrations of total alkalinity (TA) and total dissolved inorganic carbon (DIC) in relation to changes caused by the annual cycle of biological production during the mixing of river water into the Bay. Consistent annual cycles in concentrations of nutrients, TA and DIC were observed in both years. At a salinity of 31.5, the locus of primary production during the spring bloom, concentrations of NO x decreased by 25 ± 4 μmol kg−1 and DIC by 106 ± 16 μmol kg−1. Observed changes in TA were consistent with the uptake of protons during primary biological production. Concentrations of TA increased by 33 ± 8 μmol kg−1 (2009) and 33 ± 15 μmol kg−1 (2010). The impact of changes in organic matter on the measured TA appears likely to be small in this area. Thomas et al. (2009) suggested that denitrification may enhance the CO2 uptake of the North Sea by 25%, in contrast we find that although denitrification is a significant process in itself, it does not increase concentrations of TA relative to those of DIC and so does not increase buffer capacity and potential uptake of CO2 into shelf seawaters. For Liverpool Bay historical data suggest that higher concentrations of TA during periods of low flow are likely to contribute in part to the observed change in TA between winter and summer but the appropriate pattern cannot be identified in recent low-frequency river data. On a wider scale, data for the rivers Mersey, Rhine, Elbe and Weser show that patterns of seasonal change in concentrations of TA in river inputs differ between river systems.

This paper presents data for the temporal and spatial distribution of nutrients in Liverpool Bay between 2003 and 2009 and an analysis of inputs of nutrients from the major rivers. The spatial distribution of winter nutrient concentrations are controlled by the region of freshwater influence (ROFI) in Liverpool Bay through the mixing of riverine freshwater and Irish Sea water, with strong linear relationships between nutrient concentration and salinity between December and February. The location of highest spring and summer phytoplankton biomass reflects the nutrient distributions as controlled by the ROFI. Analysis of 7 years of data showed that the seasonal cycle of winter maximum nutrient concentrations in February and drawdown in April/May is a recurrent feature of this location, with the timing of the drawdown varying by several weeks between years. A comparison of observed nutrient concentrations in Liverpool Bay with those predicted from inputs from rivers has been presented. Nutrient concentrations in the rivers flowing into Liverpool Bay were highly variable and there was reasonable agreement between predicted freshwater nutrient concentrations using data from this study and riverine nutrient concentrations weighted on the basis of river flow, although the exact nature of mixing between the rivers could not be determined. Predicted Irish Sea nutrient concentrations in the winter were lower than those reported for the input waters of the North Atlantic, supporting findings from previous work that nitrogen is lost through denitrification in the Irish Sea.

At 3000 m depth the downward flux of particulate matter shows substantial seasonal and interannual variation. Complete annual records for eight of the past 14 years have been examined in the light of mixing depths derived from the OCCAM general circulation model and euphotic zone chlorophyll concentration and productivity, which were derived from the SeaWiFS satellite colour sensor. The annual flux was particularly high in 2001 due to a late summer deposition exceeding previous records several fold and this year was also characterised by very early shoaling of the mixing depth in spring and a very high surface spring chlorophyll concentration. Other years that were somewhat unusual in having either high or low flux at depth were not in general associated with unusual patterns of mixing or productivity. The percentage of the annual organic carbon primary production which reaches 3000 m varies from 0.6 to 1.2% except in 2001 when it reached 3.4%. A mechanistic relationship between upper-ocean processes and deep-ocean particle flux remains elusive and various explanations are suggested for this which need now to be addressed. In the spring, the timing of first shoaling of mixing, enhancement of productivity and increased particle flux at depth have all advanced during the 14 years of study by about 2 days per year, suggesting a similar trend as has been observed for surface phytoplankton, mesozooplankton, fish and seabirds probably caused by wide-scale environmental changes.

We present a 3-year multidisciplinary biogeochemical data set taken in situ at the Porcupine Abyssal Plain (PAP) time-series observatory in the Northeast Atlantic (49°N, 16.5°W; water depth not, vert, similar4850 m) for the period 2003 to 2005. The high-resolution year-round autonomous measurements include temperature, salinity, chlorophyll-a (derived from in situ chlorophyll-fluorescence) and inorganic nitrate, all at a nominal depth of 30 m on an Eulerian observatory mooring. This study compares these in situ time-series data with satellite chlorophyll-a data, regional data from a ship of opportunity, mixed-layer depth measurements from profiling Argo floats and lateral advection estimates from altimetry. This combined and substantial data set is used to analyse seasonal and inter-annual variability in hydrography and nitrate concentrations in relation to convective mixing and lateral advection. The PAP observatory site is in the inter-gyre region of the North Atlantic where convective mixing ranges from 25 m in the summer to over 400 m in winter when nutrients are supplied to the surface. Small inter-annual changes in the winter mixed layer can result in large changes in nitrate supply and productivity. However the decrease in maximum winter nitrate over the three-year period, from 10 to 7 mmol m?3, cannot be fully explained by convective mixing. Trajectories leading to the PAP site, computed from altimetry-derived geostrophic velocities, confirm that lateral advection cannot be ignored at this site and may be an important process along with convective mixing. Over the three years, there is an associated decrease in new production calculated from nitrate assimilation from 85.4 to 40.3±4.3 gCm?2 a?1. This confirms year-to-year variability in primary production seen in model estimates for the region. The continuous in situ dataset also shows inter-annual variation in the timing of the spring bloom due to variations in heat flux; the 2005 bloom occurred earlier than in 2004.

Unusually high chlorophyll values (~ 14 mg chl m-3 at 5 m depth), recorded on a ship of opportunity (SOO) in July 2010, indicated the occurrence of a potential Harmful Algal Bloom (HAB) in the Western approaches of the English Channel. This bloom, located at 49.7°N, 3.2°W was observed via complementary datasets. These included data from samples collected for microscopic phytoplankton identification, information from satellite maps to follow geographical bloom development and in situ data to identify hydrographic factors related to bloom initiation. The relationships between chlorophyll-fluorescence, temperature, salinity and wind speed were examined. The intense summer bloom predominantly consisted of the dinoflagellate Karenia mikimotoi and followed an increase in sea surface temperature (to 18.5 °C). A mid-channel bloom of this magnitude along the SOO route was last seen in 2003. In both years the peak biomass was associated with Karenia mikimotoi blooms, which occurred at the same location and coincided with the least saline, warmest water and lowest wind speeds. This study demonstrates that ships of opportunity are a useful tool to identify and track HAB events through continuous in situ measurements and for the frequent sampling opportunities that they provide.

A 2-year record of mixed layer measurements of CO2 partial pressure (pCO2), nitrate, and other physical, chemical, and biological parameters at a time series site in the northeast Atlantic Ocean (49N/16.5W) is presented. The data show average undersaturation of surface waters with respect to atmospheric CO2 levels by about 40 ± 15 matm, which gives rise to a perennial CO2 sink of 3.2 ± 1.3 mol m2 a1. The seasonal pCO2 cycle is characterized by a summer minimum (winter maximum), which is due to the dominance of biological forcing over physical forcing. Our data document a rapid transition from deep mixing to shallow summer stratification. At the onset of shallow stratification, up to one third of the mixed layer net community production during the productive season had already been accomplished. The combination of high prestratification productivity and rapid onset of tratification appears to have caused the observed particle flux peak early in the season. Mixed layer deepening during fall and winter reventilated CO2 from subsurface respiration of newly exported organic matter, thereby negating more than one third of the carbon drawdown by net community production in the mixed layer. Chemical signatures of both net community production and respiration are indicative of carbon overconsumption, the effects of which may be restricted, though, to the upper ocean. A comparison of the estimated net community production with satellite-based estimates of net primary production shows fundamental discrepancies in the timing of ocean productivity.

In 2002 a robust minimum maintenance system to measure temperature, conductivity, and chlorophyll fluorescence was installed on a ferry running twice weekly between Portsmouth, UK and Bilbao, Spain. Logged data are transferred from the engine room to an Orbcom satellite communicator on the bridge. On shore data enters an SQL database with access from a public web page. Data from the Iberian margin is linked to monthly surveys by IEO. Target work includes:the structure, transport of and seasonal devel- opment of water masses, and scaling of patchiness of plankton blooms in regions with different hydrographic characteristics.

Two autonomous systems were used to record plankton blooms with reduced aliasing of timing and peak biomass in two different hypernutrified systems—a “FerryBox” and a “SmartBuoy”. Temperature, salinity, fluorescence, turbidity and position were measured on the ferry, plus nutrients on the SmartBuoys. A significant spring bloom occurred at both sites in 2001. This is a typical pattern of bloom development for the two sites and can be related to environmental conditions (nutrients, light and net heat flux). Chloro- phyll levels, however, remained low at both sites in 2002. This atypical year challenges our understanding of these systems as tidal and weather conditions were similar to 2001. The low values may be due to a combination of storm events at the end of 2001 and low winter nutrient values in 2002.