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This study aimed to experimentally examine how riverbed drying and different rates of water level reduction influenced the vertical movement of amphipods of various sizes into different subsurface sediment compositions. Using sediment columns (mesocosms) filled with different sized transparent substrates, we explored how varying speeds of drawdown affected vertical movement and stranding of individuals. We hypothesised that: (1) larger individuals would be less able to migrate within subsurface sediments compared to smaller ones; (2) smaller sediment particles would lead to more individuals becoming stranded and; (3) faster rates of water level drawdown would increase the likelihood of individuals becoming stranded above the waterline. Body size significantly influenced the final position of an individual, with smaller individuals accessing deeper sediments more readily. Larger amphipods were more likely to become stranded above the waterline. Amphipods migrated to greater depths during faster water level reduction rates with smaller individuals displaying greater overall movement. Sediment particle size did not influence the ability of amphipods to move vertically into subsurface sediments in response to water level reduction. The results indicate that subsurface sediments may serve as a refuge from surface drying but that both the size of individual invertebrates influences their ability to migrate vertically.

Fine sediment availability and channel hydraulics are two of the primary controls on the ingress of fine sediment into gravel river beds. A novel dataset consisting of fine sediment ingress measurements coupled with high-resolution turbidity and discharge time series, was analysed to investigate relations between ingress, discharge and turbidity. Discharge and turbidity demonstrated a weak association with each other, and their relations with fine sediment ingress were relatively weak. An alternative, but widely applied ‘redundancy’ approach was investigated that focused on key metrics, or facets, of the discharge and turbidity time series and their association with fine sediment ingress. Principal component analysis was used to distil the most important facets driving variation in the discharge and turbidity datasets and these were then used as independent variables in regression models with sediment ingress as the dependent variable. These models accounted for a larger amount of the statistical variation in sediment ingress over time than discharge and turbidity time series. Facets of the turbidity time series were found to be the most effective explanatory variables. The results suggest that this approach could be valuable and justify its application and testing across a range of river types in different hydrological and sedimentary settings. Application of this method could improve our generic understanding of what controls ingress at larger spatial and temporal scales and therefore complements process-based approaches, which is vital for the development of fine sediment management strategies.

Foraging by benthivorous fish can affect bed material mobility and sediment flux. This paper collates evidence of benthic feeding effects at local scales and evaluates the possibility that large numbers of foraging fish, each of which accomplishes a small amount of geomorphic work when feeding, may have a cumulative effect across river systems. A first synthesis of research from several disciplines provides a deeper understanding of how fish disturb and condition bed materials with implications for sediment mobility. To evaluate the spatial extent of benthic feeding and therefore the potential for it to have a large-scale effect, the distribution of benthivorous fish is established across a large river network. After quality control, the dataset yields a comprehensive set of fish community information based on over 61,000 individuals and 30 species at 176 sites. The factors that are likely to mediate foraging and its geomorphological effectiveness are considered. A novel scoring system that incorporates three key controls (fish feeding behaviour, fish abundance and fish body size) is then applied across the river network to provide the first prediction of where geomorphologically effective benthic feeding is feasible and its possible relative magnitude. Our results demonstrate that the potential for zoogeomorphic impacts is widespread but variable in space as a function of community composition and the abundance of key benthivores. A preliminary calibration against measured field impacts suggests that benthic feeding may cause measurable geomorphological disturbance at more than 90% of sites. Together, previous work and this unique analysis suggest that benthic feeding is sufficiently effective and extensive to warrant additional research. Investigating the role of benthivorous fish in fluvial geomorphology is important because it may yield results that challenge the assumption that biota are irrelevant sources of energy in geomorphological systems. Key research questions and a roadmap to facilitate progress are identified.

1. Sedimentation and clogging (colmation) of interstitial pore spaces with fine sediment particles is widely considered to be one of the most significant threats to lotic ecosystem functioning. This paper presents the results of a running water mesocosm study examining the effect of benthic and hyporheic fine sediment loading and particle size on the vertical movement and distribution of the freshwater amphipod Gammarus pulex. 2. A gradient of fine sediment loading and different particle sizes were used to examine the ability of G. pulex from two body size classes to access and migrate vertically within subsurface sediments. 3. We tested three hypotheses: i) sediment loading would modify the distribution of G. pulex by limiting vertical movement; ii) the deposition of large particles and heterogenous sediments would limit the vertical movement of individuals more than homogeneous fine grained sediments; and iii) large bodied individuals would be prevented from migrating vertically with increasing sediment loading and particle size / heterogeneity. 4. Sediment loading, particle size and heterogeneity of deposited sediment had a significant effect on the vertical movement of individuals, with heterogeneous sand (0.125 - 4 mm) acting as the strongest barrier to the vertical movement of individuals through the infilling and clogging of interstitial spaces followed by coarse (1 - 4mm) and fine sand (0.125 - 4 mm). 5. Fine sediment loading and particle size acted as a filter on body size and limited the ability of large bodied individuals to migrate vertically to a greater extent than small bodied individuals. 6. This study demonstrates that the effects of fine sediment on habitat availability and faunal movement is dependent on both sedimentological characteristics and an individual’s body size. The results illustrate the importance of both abiotic and biotic factors when evaluating the ecological 66 effects of fine sediment deposition.

Habitats that mitigate the effects of a disturbance event (e.g. flood) are referred to as refugia. Their occurrence in heavily impacted river systems is often limited, and their restoration rarely pursued. This paper presents the results of a combined laboratory and numerical modeling study to assess flood refugia availability to mobile aquatic organisms in the context of river restoration and dynamic river widening. We used a calibrated 2D hydrodynamic model based on eight topographies obtained in laboratory experiments to assess refugia availability by analyzing the hydro-morphological conditions under varying sediment supply. Overall, sediment equilibrium sustains more complex hydro-morphological conditions with low bed shear stress zones being maintained during elevated discharges. Furthermore, our results suggest that the floodplain is an important potential refuge that becomes accessible for discharges with a return period of approximately one year. Conversely, sediment deficit results in a homogeneous flow field with steadily increasing hydraulic forces for high flows and impaired lateral connectivity except for very large flood events of a 30- to 100-year return period. Dynamic river widening implemented in a channel with sediment equilibrium conditions as opposed to a sediment deficit is thus more likely to provide flood refugia.

Artificial drainage ditches are common features in lowland agricultural catchments that support a wide range of ecosystem services at the landscape scale. Current paradigms in river management suggest activities that increase habitat heterogeneity and complexity resulting in more diverse floral and faunal assemblages; however, it is not known if the same principles apply to artificial drainage ditch systems. We examined the effects of four artificial substrates, representing increasing habitat complexity and heterogeneity (bricks, gravel, netting and vegetation), on macroinvertebrate community structure within artificial drainage ditches. Each substrate type supported a distinct macroinvertebrate community highlighting the importance of habitat heterogeneity in maintaining macroinvertebrate assemblages. Each substrate type also displayed differing degrees of community heterogeneity, with gravel communities being most variable and artificial vegetation being the least. In addition, several macroinvertebrate diversity metrics increased along the gradient of artificial substrate complexity, although these differences were not statistically significant. We conclude that habitat management practices that increase habitat complexity are likely to enhance macroinvertebrate community heterogeneity within artificial drainage channels regardless of previous management activities.

This study investigates the potential for physical damage caused by suspended fine sediment on gills of three macroinvertebrate species, Hydropsyche siltalai, Ephemera danica and Ecdyonurus venosus. Macroinvertebrate cadavers were exposed to three suspended sediment concentrations (control 3.5, low 83.7 and high 404.0 mg l−1) at two velocities (low 0.19 m s−1 and high 0.37 m s−1), for 6 h in a recirculating flume. Tracheal gill surfaces were subsequently examined for evidence of physical damage using scanning electron microscopy (SEM) images. Physical damage predominantly consisted of fine sediment coverage of gill surfaces, appearing as a deposited layer of sediment obscuring and potentially clogging the gill. For E. venosus, suspended sediment concentration influenced gill cover, but velocity had no significant effect. Coverage of H. siltalai gill surfaces increased significantly between low and high sediment concentrations but only at the higher flow velocity. Gill coverage of E. danica did not differ across any sediment concentration. The results were consistent with reported species sensitivities to fine sediment, despite the use of cadavers. However, we found limited evidence of physical abrasion as a direct physical effect of fine sediment under the experimental conditions used.

Sediment transport in mountain streams can be a major hazard to downstream infrastructure. Consequently, sediment traps are a common feature in many high gradient streams to retain large volumes of sediment and protect settlements from major sediment transport events. Despite the wide application of these instream structures, there is little knowledge regarding the environmental and ecological effects on streams. Here, we investigated the hydromorphological effects of sediment traps on instream habitats and associated macroinvertebrate communities in four impacted and three non-impacted streams in Switzerland. Sediment traps significantly disrupted the sediment regime homogenising grain size percentiles compared to the natural stepwise downstream fining in control streams. This disruption in the sediment regime resulted in finer grain size distributions upstream of the sediment trap, and reduced substrate diversity in the sediment retention basin and just downstream of the trap. The reductions in substrate diversity resulted in an altered macroinvertebrate community composition. Further, the disconnection in sediment transport led to a lack of longitudinal correlation in macroinvertebrate communities. Refugia provision downstream of the sediment trap, and resource availability within the retention basin, were diminished, potentially reducing resilience of macroinvertebrate assemblages to instream disturbances. The effects of sediment traps were most likely localised in three of the four streams with substrate diversity recovering to comparable control values within 8 wetted widths (ca. 50 m) downstream of the trap associated with natural longitudinal fining. In contrast, ecological and environmental effects propagated downstream in one impacted stream with no recovery being evident. Sediment retention basins in the impacted streams provided a local artificially unique habitat of dynamic-braided channels. Our results indicate that sediment traps can significantly disrupt the sediment regime with important consequences for instream ecology and environmental conditions, although these effects can be system specific. Further work is needed to fully understand the effects of sediment traps in mountain streams to assist resource managers in the mitigation and future construction of these structures.

Fine sediment storage within gravel beds is a key component of catchment sediment budgets and affects the health of benthic and hyporheic habitats. Here, we assess the performance of two substrate infiltration traps for the characterization of fine sediment (

Temporary streams constitute a significant proportion of rivers globally and are common in wet, cool, temperate regions. These heterogeneous ecosystems harbour high biodiversity associated with the dynamic turnover of taxa. Despite flow permanence being widely recognised as an important environmental control, few studies have characterised biotic responses to long‐term hydrological variability in temporary streams. We examined taxonomic and functional macroinvertebrate communities of perennial and nonperennial river reaches over a 26‐year period. Flow permanence resulted in spatial variation in taxonomic and functional macroinvertebrate communities. Nonperennial river reaches, which were characterised by dynamic habitat provision (lotic, lentic, and dry states) over the study period, supported more heterogeneous communities than perennial river reaches. Hydrological variables, in particular wetted width, water depth, and zero‐flow states, were instrumental in structuring taxonomic and functional communities, although the importance of substrate conditions increased in autumn. Hydrological conditions resulted in separation of perennial and nonperennial taxonomic communities regardless of season, whereas functional communities differed only in spring. Our results emphasise that understanding of community responses to hydrological variability is enhanced by analyses that concurrently explore taxonomic and functional responses to long‐term intraannual and interannual hydrological variability. Moreover, functional responses represent a robust method to test ecological responses to hydrological drivers. Further research that builds on our work is needed to inform the protection of both perennial and nonperennial streams as they adapt to ongoing environmental change.

The duration, intensity and frequency of hydrological droughts are predicted to increase significantly over the 21st century globally, threatening the long-term stability of lotic communities. In this paper we examine the recovery and recolonization of macroinvertebrate taxa in ephemeral and near perennial reaches of the River Lathkill (UK) after a supra-seasonal drought event. Following flow resumption, species accumulation (recolonization) occurred rapidly over a 4-month period, with a steady increase observed thereafter. Taxonomic richness was significantly higher in the section with near perennial flow after the first month of the study than the naturally ephemeral reach. Serial correlation was observed in the near perennial section but not in the upstream ephemeral reach. Serial correlation in the near perennial section may reflect: (1) the ongoing process of recovery or (2) the macroinvertebrate community following a new ecological trajectory. Our results suggest that supra-seasonal droughts may cause initial reductions in lotic diversity during stream desiccation events but may re-set ecological succession and/or temporarily provide new ecological niches, thereby supporting increased taxonomic diversity when the full range of hydrological conditions are considered. Quantifying the recovery of ecological communities following supra-seasonal drought can provide information to help develop ecologically effective conservation and management strategies.

Characterizing temporary river ecosystem responses to flow regimes is vital for conserving their biodiversity and the services they provide to society. However, freshwater biomonitoring tools rarely reflect community responses to hydrological variations or flow cessation events, and those available have not been widely tested within temporary rivers. This study examines two invertebrate biomonitoring tools characterizing community responses to different flow‐related properties: the “Drought Effect of Habitat Loss on Invertebrates” (DEHLI) and “Lotic‐invertebrate Index for Flow Evaluation” (LIFE), which, respectively reflect community responses to habitat and hydraulic properties associated with changing flow conditions. Sub‐seasonal (monthly) variations of LIFE and DEHLI were explored within two groundwater‐fed intermittent rivers, one dries sporadically (a flashy, karstic hydrology—River Lathkill) and the other dries seasonally (a highly buffered flow regime—South Winterbourne). Biomonitoring tools were highly sensitive to channel drying and also responded to reduced discharges in permanently flowing reaches. Biomonitoring tools captured ecological recovery patterns in the Lathkill following a supra‐seasonal drought. Some unexpected results were observed in the South Winterbourne where LIFE and DEHLI indicated relatively high‐flow conditions despite low discharges occurring during some summer months. This probably reflected macrophyte encroachment, which benefitted certain invertebrates (e.g., marginal‐dwelling taxa) and highlights the importance of considering instream habitat conditions when interpreting flow regime influences on biomonitoring tools. Although LIFE and DEHLI were positively correlated, the latter responded more clearly to drying events, highlighting that communities respond strongly to the disconnection of instream habitats as flows recede. The results highlighted short‐term ecological responses to hydrological variations and the value in adopting sub‐seasonal sampling strategies within temporary rivers. Findings from this study indicate the importance of establishing flow response guilds which group taxa that respond comparably to flow cessation events. Such information could be adopted within biomonitoring practices to better characterize temporary river ecosystem responses to hydrological variations.

Sediment transport is regarded as an abiotic process driven by geophysical energy, but zoogeomorphological activity indicates that biological energy can also fuel sediment movements. It is therefore prudent to measure the contribution that biota make to sediment transport, but comparisons of abiotic and biotic sediment flux are rare. For a stream in the UK, the contribution of crayfish bioturbation to suspended sediment flux was compared with the amount of sediment moved by hydraulic forcing. During baseflow periods, biotic fluxes can be isolated because nocturnal crayfish activity drives diel turbidity cycles, such that night-time increases above day-time lows are attributable to sediment suspension by crayfish. On average, crayfish bioturbation contributed at least 36% (430 kg) to monthly baseflow suspended sediment loads; this biotic surcharge added between 4.7 and 13.54 t (0.19 to 0.55 t km-2 yr-1) to the annual sediment yield. As anticipated, most sediment was moved by hydraulic forcing during floods and the biotic contribution from baseflow periods represented between 0.43 and 1.24% of the annual load. Crayfish activity is nonetheless an important impact during baseflow periods and the measured annual contribution may be a conservative estimate because of unusually prolonged flooding during the measurement period. In addition to direct sediment entrainment by bioturbation, crayfish burrowing supplies sediment to the channel for mobilization during floods so that the total biotic effect of crayfish is potentially greater than documented in this study. These results suggest that in rivers, during baseflow periods, bioturbation can entrain significant quantities of fine sediment into suspension with implications for the aquatic ecosystem and baseflow sediment fluxes. Energy from life rather than from elevation can make significant contributions to sediment fluxes.

The distribution of lotic fauna is widely acknowledged to be patchy reflecting the interaction between biotic and abiotic factors. In an in-situ field study, the distribution of benthic and hyporheic invertebrates in the heads (downwelling) and tails (upwelling) of riffles were examined during stable baseflow conditions. Riffle heads were found to contain a greater proportion of interstitial fine sediment than riffle tails. Significant differences in the composition of benthic communities were associated with the amount of fine sediment. Riffle tail habitats supported a greater abundance and diversity of invertebrates sensitive to fine sediment such as EPT taxa. Shredder feeding taxa were more abundant in riffle heads suggesting greater availability of organic matter. In contrast, no significant differences in the hyporheic community were recorded between riffle heads and tails. We hypothesise that clogging of hyporheic interstices with fine sediments may have resulted in the homogenization of the invertebrate community by limiting faunal movement into the hyporheic zone at both the riffle head and tail. The results suggest that vertical hydrological exchange significantly influences the distribution of fine sediment and macroinvertebrate communities at the riffle scale.

Deposition of fine sediment that fills interstitial spaces in streambed substrates is widely acknowledged to have significant negative effects on macroinvertebrate communities, but the temporal consistency of clogging effects is less well known. In this study the effects of experimentally enhanced fine sediment content on aquatic invertebrates were examined over 126 days in two lowland UK streams. Taxonomic approaches indicated significant differences in macroinvertebrate community structure associated with sediment treatment (clean or sedimented substrates), although the effects were variable on some occasions. The degree of separation between clean and sedimented communities was strong within seven of the nine sampling periods with significant differences in community composition being evident. EPT taxa and taxon characterised as sensitive to fine sediment demonstrated strong responses to enhanced fine sediment loading. Faunal traits also detected the effects of enhanced fine sediment loading but the results were not as consistent or marked. More widely, the study highlights the temporal dynamics of sedimentation effects upon macroinvertebrate communities and the need to consider faunal life histories when examining the effects of fine sediment loading pressures on lotic ecosystems.

Copyright © 2017 John Wiley & Sons, Ltd. Excess fine sediment is a global cause of lotic ecosystem degradation. Despite historic interest in identifying sediment sources and quantifying instream dynamics, tackling fine sediment problems remains a key challenge for river managers and a continued focus of international research. Accordingly, a national meeting of the British Hydrological Society brought together those working on fine sediment issues at the interface of hydrology, geomorphology, and ecology. The resulting collection of papers illustrates the range of research being undertaken in this interdisciplinary research arena, by academic researchers, environmental regulators, landowners, and consultants. More specifically, the contributions highlight key methodological advancements in the identification of fine sediment sources, discuss the complexities surrounding the accurate quantification of riverbed fine sediment content, demonstrate the potential utility of faunal traits as a biological monitoring tool, and recognize the need for improved mechanistic understanding of the functional responses of riverine organisms to excess fine sediment. Understanding and mitigating the effects of fine sediment pressures remains an important and multifaceted problem that requires interdisciplinary collaborative research to deliver novel and robust management tools and sustainable solutions.

Sedimentation and clogging of benthic and hyporheic zone substrata is increasingly being recognised as one of the greatest threats to the ecological integrity of riverine ecosystems globally. This ex situ study examined the influence of sedimentation (surface and subsurface) and pattern of hydrological exchange on the vertical distribution of the freshwater shrimp Gammarus pulex within the experimental substrata of running water mesocosms. Six sediment treatments representing a continuum from a clean gravel substratum to heavy sediment loading of both surface (benthic) and subsurface (hyporheic) substrata were used to examine the distribution of G. pulex in relation to the direction of hydrological exchange (downwelling, upwelling and no exchange). The distribution of G. pulex between the sediment layers was dependent on the pattern of hydrological exchange, sediment treatment and the interaction between these two factors. Sedimentation of the surface layer under no-exchange conditions resulted in a lower proportion of G. pulex being recorded in the benthic sediments, whilst there were no significant differences under downwelling and upwelling flow conditions. Sedimentation of multiple layers of the column (benthic and subsurface) reduced the ability of individuals to utilise the subsurface layers of the substratum (i.e. the hyporheic zone) under no-exchange and upwelling conditions. However, with downwelling conditions, the abundance of G. pulex declined with depth regardless of the fine sediment distribution or volume. This study demonstrates that faunal movement, and use of benthic and hyporheic substrata, may be influenced by sedimentation and modified by the pattern of vertical hydrological exchange. Severe sedimentation (colmation) has the potential to prevent benthic fauna from accessing the hyporheic zone and its resources which may ultimately lead to a reduction in stream diversity and metabolism, thereby limiting overall productivity and lotic ecosystem resilience.

Fine sediment deposition and infiltration into the bed of lotic ecosystems, such as sedimentation, siltation and colmation, has been widely recognised as one of the most important causes of degradation within lotic ecosystems. The impact of increased fine sediment loading as a result of agricultural practices, urban development and channel management activities for flood defence purposes, have been widely acknowledged but poorly quantified. This chapter quantifies the influence of increasing sediment input that is sediment loading on the benthic invertebrate community inhabiting an artificial channel with an impervious concrete bed. This approach provided highly controlled conditions but also reflected channel and habitat characteristics typical of many highly modified and managed urban streams. Significant advances have been made recently in the development of biomonitoring tools which quantify fine sediment impacts on instream communities and which facilitate identification of vulnerable locations within river channels.