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Summer outbreaks of the dinoflagellate Alexandrium taylorii Balech are recurrent events in nearshore waters of Sicily (Italy)—a central region in the Mediterranean Sea—producing dense yellowish-green patches. Beyond the local phenomenon, the problem covers a broader geographic scale, involving also other European localities, mostly in Spain. Biological, environmental, and molecular data are reported here from a semi-closed bay of Sicily (Vulcano Island, Tyrrhenian Sea, 2000-2003), showing in summer the recurrence of high-biomass blooms and events of water discolouration. Without underestimating the setbacks to the tourism industry, the ecological impact of A. taylorii blooms may be important considering the high levels of biomass produced (West Bay, Vulcano: up to a magnitude order of 107 cells l−1, 50-180 µg-Chla l−1, June 2002 and 2003) and coincident conditions of oxygen supersaturation of the waters (130-170%). Trophic trends in the Tyrrhenian site indicate high amounts of nutrients linked to the increased anthropogenic activity in summer, although recently there has been an apparent shift of the marked eutrophic conditions towards a slighter eutrophy. Genetic data on isolates of A. taylorii from the Mediterranean Sea are also discussed. Molecular analyses implied the sequencing of target rDNA regions (5.8S rDNA and ITS regions) of several isolates from different Mediterranean localities, as well as the application of species-specific PCR assays for rapid species identification in preserved field samples. The confirmation of the specific identity provided new insights into the biogeography of this species and further evidence of the occurrence of A. taylorii in a number of Mediterranean localities, both in the western side (the Catalan coast of Spain) and the eastern area (Greece). Analyses of the molecular diversity of geographically distinct isolates of A. taylorii from Italy, Spain, and Greece based on the 5.8S rDNAITS region sequences showed a high level of similarity, indicating the existence of an unique Mediterranean population. [ABSTRACT FROM AUTHOR]

Since the discovery of the green alga Caulerpa taxifolia in Lake Macquarie (New South Wales, Australia) in 2001, the New South Wales Department of Primary Industries (Fisheries) has attempted various control methods, including covering the alga with granulated sea salt to induce osmotic shock and cell lysis. In Lake Macquarie, C. taxifolia often occurs in patches within beds of the native seagrass Zostera capricorni. Although the effects of the salt treatment on blades of Z. capricorni and infauna have been shown to be minimal, there have been no tests of any effects on other native biota, including seagrass epifauna. In this study, we tested the general hypothesis that the abundance and diversity of epifauna would be reduced by salting. We used a ‘Beyond BACI' experimental design whereby epifaunal invertebrates were sampled 3 months, 6 weeks and 6 days before and then again after salting. Epifaunal abundances at the putatively impacted (salted) location were compared to those at 4 control locations (where no salt was applied). Abundances of most organisms varied significantly among times and locations with no evidence of the consistent effect of salting on diversity or abundance of epifauna. The study represents an example of the use of large-scale managerial action as a scientific experiment. [ABSTRACT FROM AUTHOR]

In this work we have studied the assemblages from Quirra canyon (Sardinia). We analysed data from 25 trawl samples from the canyon, made at different times and depth. A total of 71 demersal species (38 teleosts, 5 cartilaginous fishes, 13 molluscs and 15 crustaceans) were examined. We found four groups using cluster analysis; each group is characterised by a certain depth or time. In particular we have shown that the time of the day appears to have a role in the movement of shrimps and other species. This phenomenon seems to be linked to trophic need and by the consequent different food availability into the Canyon. [ABSTRACT FROM AUTHOR]

In the Adriatic Sea, the correlation between mucilage phenomena and the presence of Gonyaulax fragilis (Schütt) Kofoid (Dinophyta) has been recently demonstrated. The application of PCR-based methods and the development of species-specific molecular probes might represent powerful technologies for rapid and specific monitoring of microalgal species in seawater samples. Here, we report sequencing of the small subunit (SSU) ribosomal RNA gene (18S rDNA) of G. fragilis and its comparative analysis within the Dinophyta. Total DNAs were extracted and amplified from cultured cells of G. fragilis, which were isolated from natural phytoplanktonic association in the northern Adriatic Sea. Total 18S rDNA gene was amplified using 16S1N and 16S2N primers and sequenced using ad hoc designed internal primers. The primers amplified a product of expected size (length 1700/1800 bp). The phylogenetic analysis carried out by comparing G. fragilis sequence to homologous sequences of Lingulodinium polyedrum (Stein) Dodge, Gonyaulax spinifera (Claparède et Lachmann) Diesing, Protoceratium reticulatum (Claparède et Lachmann) Bütschli revealed a great nucleotide divergence of G. fragilis SSU sequence. Therefore, the SSU sequence could be used as species-specific marker for the identification of this mucilage producer microalga. In addition, such sequence could be used as target to design oligonucleotide probes for the construction of DNA microchips as diagnostic tool for the routine monitoring of harmful algae in seawater. [ABSTRACT FROM AUTHOR]

This study was aimed at the acquisition of basic life-history information on Raja asterias through an objective approach in the assignment of maturity stage, using both histological techniques and a multivariate analysis aimed at macroscopic evaluations of the reproductive system. The samples examined were collected from landings of commercial trawl vessels from the port of Viareggio. From July 2001 to August 2002 a total of 351 specimens, 166 females and 155 males, were purchased. A description of the main stages of oogenesis and spermatogenesis is presented here. Moreover, on the basis of the maturity stage definition, maturity ogives were constructed. Length at 50% maturity was estimated to be 51.7 cm and 56.1 cm total length for males and females respectively. Finally an informal table for the maturity stage assignment, which can be useful for a quick and easier definition both on board and in the laboratory, is formulated. [ABSTRACT FROM AUTHOR]

On the North-Western Mediterranean coastline, the genus Cystoseira (Fucales) has a key role on upper infralittoral community structure. Cystoseira amentacea var. stricta and C. compressa are the most common superficial Cystoseira species. In this area, the coastline is subjected to a strong anthropogenic pressure which has caused severe Cystoseira population decreases. The present study consists in the development of a cheap and easy to use transplantation technique of C. amentacea var. stricta and C. compressa in order to either restore former natural populations or help their settlement on artificial substrates. The thalli were fixed with epoxy glue in holes made by a drill. The success of the technique was assessed by counting the number of remaining transplanted thalli after 3 weeks, 3 months and 6 months. Results were found encouraging with 75% of survival for both species after 6 months. Moreover fertile fronds were observed on the transplanted thalli showing the harmlessness of the technique. [ABSTRACT FROM AUTHOR]

The aim of the study was to evaluate the long-term development of a hard bottom benthic assemblage over a period of 20 years in an area off the mouth of a large river. The artificial reef of Fregene was selected because benthic assemblage data were available for the period 1981-1992. This artificial reef is located in the mid Tyrrhenian Sea, 5 nautical miles north of the two mouths of the Tevere River (Latium, Italy) and 1.5 nautical miles offshore from Fregene (Rome, Italy). The artificial reef was deployed in March 1981 for fisheries enhancement in 10-14 m of water on a sandy-silty seabed. The Tevere River carries suspended materials and a heavy load of organics since it transports Rome's effluent, resulting in the eutrophic state of area waters. Benthic sampling was conducted in 2001 by SCUBA diving; two standard surfaces of 400 cm2 were scraped from the vertical walls of the same uppermost block in four different periods. All organisms were identified and counted. The methodology used is the same as that adopted in the previous periods, so that the 2001 data could be compared with past collected data. The benthic assemblage was analysed by cluster analysis using the Bray-Curtis index and clustered using the group average clustering algorithm. The SIMPER procedure was used to identify those taxa that characterize each station group identified by cluster analysis. Changes in benthic assemblages and hydrological trends of the Tevere River were investigated using the cumulative sum series method. The 20-year development of the benthic community, starting from the new substratum, is composed of different phases characterised by different benthic assemblages. In particular five different phases were distinguished: 1. Pioneer species recruitment (May 1981-June 1981); 2. Mytilus galloprovincialis (mussel) dominance (August 1981-November 1983); 3. M. galloprovincialis regression (July 1984-October 1985); 4. M. galloprovincialis absence (91-92); 5. Bryozoans bioconstruction dominance (2001). The dynamic succession of the observed benthic assemblages exhibited a good relation with the Tevere River flow. The Tevere River flow, and the subsequent sedimentation process, seems to have strongly influenced the benthic assemblage succession of the Fregene artificial reef. [ABSTRACT FROM AUTHOR]

Artificial reefs have been deployed worldwide for the last three decades in response to problems concerning coastal resources, ecosystems and fisheries. In many countries they have became important elements of integrated fisheries management plans. In Portugal two artificial reef systems (ARSs) were deployed by the Portuguese Institute of Marine Research (IPIMAR) in 1990, in the southern coast (Algarve). They were located off Faro and Olhão, over different seabottom types and located at different distances from the coastline. To analyse the effect of ARSs deployment on local fish assemblages and to evaluate their effectiveness in terms of mean fishing yields and mean number of species caught, fishing surveys have been conducted over 14 years (256 net sets) using a gillnet to sample the ARS of Faro and Olhão and respective control sites. The fishing yields from the ARs continually exceeded those from the control sites, in both the mean number of species caught and the mean CPUE in weight (1.8-2.6 times); both were higher at Faro. Moreover, the comparison between fish assemblages from the ARS and respective control sites showed that the deployment of the man-made structures did not change the composition of the fish assemblages caught by the gill nets, or the equilibrium of the community, since the relative proportion of the different functional groups of fish remained stable. The ARSs are a useful management tool on the Algarve coast, enhancing and diversifying the catches, thus contributing to improved local artisanal fisheries, which play a major role in this region. [ABSTRACT FROM AUTHOR]

The red coral Corallium rubrum (L 1758) is a long-lived, slow-growing gorgonian, endemic to Mediterranean rocky bottoms. Because of its high economic value, red coral has long been harvested, and most populations have been depleted. In the present study, 54 marble tiles were placed in June 2003 within red coral populations over 3 different geographic areas (Calafuria-Livorno and Elba MPA in Italy and Medes Islets MPA, in Spain), on vertical cliffs between 25 and 35 m. In each area 2 different sites were randomly selected. Tiles were subsequently sampled photographically. Between July and August 2003 red coral recruits settled on tiles in all the geographic areas and sites, exhibiting wide variability in their density. On the basis of a 2-factors nested ANOVA a significant variability between different sites at a few hundred metres distance occurred, indicating high variations in the recruitment process within the same red coral population. Mortality, measured in June 2004, widely varied between different geographic areas. [ABSTRACT FROM AUTHOR]

From 1970 to the present 10 artificial reef sites have been developed in coastal waters of the Ligurian Sea, Italy. They range from Ventimiglia, in the west, to La Spezia, in the east, with the largest and best known reef complex being located in the Gulf of Genoa at Loano and consisting of 2,745 m3, about 5,200 t of material and covering a surface of 350 ha. Design and construction practices have advanced from an initial, unsuccessful effort that used automobile bodies (now banned) to current use of custom-designed concrete modules deployed systematically. Funding for reef construction has come since 1983. The earliest aim of reefs was as a physical barrier to protect habitats against illegal otter trawl fishing. Newer objectives include habitat restoration, enhancement of biodiversity and fishing catch, and research to test materials and designs for physical and ecological performance. Reefs also functions as environmental observation stations, with the invasive species Caulerpa taxifolia (Vahl) C. Agardh, being recorded on the reef at Alassio. For some Artificial Reefs (Ars), benthic organisms and fishes, settlement, biomass and development of community are recorded. In Loano AR, immersed in 1986, more than 150 algae species are recorded, more than 200 benthic animal species and 78 species (87 taxa) of fishes. Fifty-six species (61 taxa) of fishes are recorded by visual census, the others are caught only by trammel net and long line. Trammel catches at Loano are on average about 2.32 kg/100 m net. Comparisons among ARs reveal that age of the reef, location and presence of seagrass meadows are crucial for success. An indication of functional equivalence between ARs and natural rocky reefs is seen if both fish and sessile macrobenthos are compared. After 34 years of investigation a database comprising at least one hundred scientific articles based on research programs of up to 15 years, and other unpublished reports, provides information to guide future planning of reefs. On the basis of acquired experience, some management advice is suggested and the best design for the basic module in the Ligurian sea is described. The role of ARs, providing protection of coastal environment against the illegal otter trawling, nursery, microhabitat and food supply, while increasing biodiversity, biomass of benthos and fishes, and facilities for ecotourism, is outlined. [ABSTRACT FROM AUTHOR]

The artificial reef (AR) complex of the Algarve (Southern Portugal), deployed for the purpose of restoring and enhancing fisheries resources, is currently the largest structure of its kind in Europe, extending for over 43.5 km2. Such a structure can be expected to have had both positive and negative impacts. To evaluate the overall perception of the effects of deployment, a survey of stakeholders' opinions was undertaken based on a set of questions addressing various dimensions (environmental, social, and economic). The survey covered 44 key-stakeholder representatives distributed in six groups: commercial fishermen associations, anglers associations and clubs, diving schools and clubs, fisheries and environmental administrators, natural and social scientists, and local council representatives in the fisheries and/or environmental sectors. The opinions of stakeholders were measured using summated rating scales. The results obtained reflect the most important issues be impacted and the possibility of using them as indicators of relative success or failure. From a total of 12 factor-sets of impacts, the results showed that in general the environmentally related were the ones having had the most positive results. The overall perception of the environmental factor-sets specified as the ‘deployment area use' revealed that the artificial reefs were an incentive to users and that the structures were perceived as a satisfactory tool to support the fishery and its management. In both cases divers were the strongest supporters. A closer look at the results presented in the form of an AMOEBA plot showed that there were other factor-sets perceived as impacting positively in other dimensions. Such examples are the factor-sets ‘opinion' and ‘production and benefits' lying respectively in the social and economic dimensions. The latter factor-set was even the only one having the support of five out of six stakeholder-types. As expected, in general different stakeholder-types take somewhat different positions and attitudes towards AR impacts: usually scientists are the most optimistic, whereas fishermen take the most sceptic view. [ABSTRACT FROM AUTHOR]

This study was carried out on the "Faro/Ancão" artificial reef (AR), located off Faro, deployed in May 2003. We aimed to characterise early macrobenthic community colonisation of two concrete AR groups located at different depths (16 m and 20 m depth) and to test the effect of reef structure on these communities. The non-colonial organisms were counted; barnacles and colonial species were quantified using biomass. Multivariate analyses indicated that early macrobenthic communities (6 months of immersion) were affected by depth, and that barnacles and colonial species were also affected by reef structure. Univariate analyses showed that the biomass of barnacles and colonial species was significantly different among reefs and layers of modules. Both AR groups were characterised by the species Balanus amphitrite, Gregariella subclavata, Musculus cf. subpictus, Paleanotus cf. bellis and Syllidia armata. Jassa marmorata and Bugula neritina were characteristic species at 16 m depth, particularly on the AR Upper layer of modules, whereas Anomia ephippium was particularly common at 20 m, especially on the Lower layer of modules. [ABSTRACT FROM AUTHOR]

Derelict ships are commonly deployed as artificial reefs in the United States, mainly for recreational fishers and divers. Despite their popularity, few studies have rigorously examined fish assemblages on these structures and compared them to natural reefs. Six vessel-reefs off the coast of southeast Florida were censused quarterly (two ships per month) to characterize their associated fish assemblages. SCUBA divers used a nondestructive point-count method to visually assess the fish assemblages over 13- and 12-month intervals (March 2000 to March 2001 and March 2002 to February 2003). During the same intervals, fish assemblages at neighboring natural reefs were also censused. A total of 114,252 fishes of 177 species was counted on natural and vessel-reefs combined. Mean fish abundance and biomass were significantly greater on vessel-reefs in comparison to surrounding natural reef areas. Haemulidae was the most abundant family on vessel-reefs, where it represented 46% of total fish abundance. The most abundant family on natural reefs was Labridae, where it accounted for 24% of total fish abundance. Mean species richness was significantly greater on vessel-reefs than neighboring natural reefs and also differed among vessel-reefs. Both mean fish abundance and mean species richness were not significantly different between natural reefs neighboring vessel-reefs and natural reefs with no artificial structures nearby. This suggests the vessel-reefs are not, in general, attracting fish away from neighboring natural reefs in our area. Additionally, economically important fish species seem to prefer vessel-reefs, as there was a greater abundance of these species on vessel-reefs than surrounding natural reef areas. Fish assemblage structure on natural versus artificial reefs exhibited a low similarity (25.8%). Although no one species was responsible for more than 6% of the total dissimilarity, fish assemblage trophic structure differed strikingly between the two reef types. Planktivores dominated on vessel-reefs, accounting for 54% of the total abundance. Conversely, planktivores only made up 27% of total abundance on natural reefs. The results of this study indicate vessel-reef fish assemblages are unique and that these fishes may be utilizing food resources and habitat characteristics not accessible from or found at natural reefs in our area. Production may also be occurring at vessel-reefs as the attraction of fish species from nearby natural reefs seems to be minimal. [ABSTRACT FROM AUTHOR]

Artificial habitats in marine ecosystems are employed on a limited basis to restore degraded natural habitats and fisheries, and more extensively for a broader variety of purposes including biological conservation and enhancement as well as social and economic development. Included in the aims of human-made habitats classified as artificial reefs are: Aquaculture/marine ranching; promotion of biodiversity; mitigation of environmental damage; enhancement of recreational scuba diving; eco-tourism development; expansion of recreational fishing; artisanal and commercial fisheries production; protection of benthic habitats against illegal trawling; and research. Structures often are fabricated according to anticipated physical influences or life history requirements of individual species. For example, many of the world's largest reefs have been deployed as part of a national fisheries program in Japan, where large steel and concrete frameworks have been carefully designed to withstand strong ocean currents. In addition, the differing ecological needs of porgy and sea bass for shelter guided the design of the Box Reef in Korea as a device to enhance productivity of marine ranching. The effect of these and other structures on fisheries catch is positive. But caution must be exercised to avoid using reefs simply as fishing devices to heavily exploit species attracted to them. No worldwide database for artificial habitats exists. The challenge to any ecological restoration effort is to define the condition or possibly even the historic baseline to which the system will be restored; in other words, to answer the question: "Restoration to what?" Examples of aquatic ecosystem restoration from Hong Kong (fisheries), the Pacific Ocean (kelp beds), Chesapeake Bay (oysters) and the Atlantic Ocean (coral reefs) are discussed. The degree to which these four situations consider or can approach a baseline is indicated and compared (e.g., four plants per 100 m2 are proposed in one project). Measurement of performance is a key factor in restoration planning. These situations also are considered for the ecosystem and fishery contexts in which they are conducted. All use ecological data as a basis for physical design of restoration structures. The use of experimental, pilot and modeling practices is indicated. A context for the young field of marine restoration is provided by reviewing major factors in ecosystem degradation, such as high stress on 70% of commercially valuable fishes worldwide. Examples of habitat disruption include an extensive hypoxic/anoxic zone in the Gulf of Mexico and nutrient and contaminant burdens in the North Sea. Principles of ecological restoration are summarized, from planning through to evaluation. Alternate approaches to facilitate ecological recovery include land-use and ecosystem management and determining levels of human population, consumption and pollution. [ABSTRACT FROM AUTHOR]

The opening of the Suez Canal resulted in the introduction of Indo-Pacific organisms (Lessepsian) to the eastern Mediterranean. Available information on the Levantine ichthyofauna concerns mainly necto-benthic species, while pelagic ones remain mostly uncharacterized. This paper presents a preliminary assessment of biodiversity and its temporal changes on the Lebanese coast (eastern Mediterranean) using species composition and abundance of pelagic communities as indicators. For this purpose, a total of 11,192 fishes, representing 32 species and 19 families were collected with purse seines. Lessepsian species represented 40.9% of the species number in the purse-seine catches but only 0.48% in abundance of individuals and 1.57% in biomass. The families most represented in terms of abundance were the Clupeidae (49.28%), the Engraulidae (41.69%) and the Scombridae (7.01%); in terms of biomass these families represented 56.76, 22.04 and 9.72%, respectively. Abundance and biomass exhibited clear temporal fluctuations with Sardina pilchardus and Scomber japonicus dominating the catches between May and June, and then replaced by Sardinella aurita in July and Engraulis encrasicolus in August. The highest values of species richness (12 species) and diversity indices (H′ = 1.37; D = 0.71) were recorded in the last two weeks of June while the lowest values (5 species, H′ = 0.26; D = 0.11) were recorded in early August. While Lessepsian fishes represented a minor part in terms of landings, they contributed considerably to the diversity of pelagic fish assemblages in Lebanese waters. [ABSTRACT FROM AUTHOR]

In this paper, species diversity of demersal fish communities was analysed over an area covering about 45,000 km2 of the Italian side of the Strait of Sicily (central Mediterranean). Fish abundance data come from a 10-year series (1994-2003) of experimental bottom trawl surveys carried out within the framework of the international program MEDITS. A simple GIS-based method was proposed to identify areas supporting high or low values of diversity and evaluate their temporal stability. A well-defined spatio-temporal pattern in diversity emerged from the analysis, with some areas of great ecological relevance being identified. Importantly, the greatest diversity within the fish communities was consistently seen at the offshore bank on the western part of the south Sicilian shelf (Adventure Bank). The site also supports high total biomass of demersal resources and shows the presence of species of great concern to fisheries. Results suggest that Adventure Bank represents a priority site for investigating the possibility of innovative management of marine ecosystems and demersal fisheries in offshore zones. [ABSTRACT FROM AUTHOR]

The relationships between the concentration of water nutrients and the biomass of benthic invertebrate feeding guilds were examined at 46 sites in the northern Baltic Sea during 1993-2003. We analysed whether and how degree of exposure, presence of fronts, salinity, hypoxia, nutrient concentrations, depth, sediment type and structure of invertebrate communities contributed to these relationships. In general macrozoobenthos did not respond to the changing nutrient concentrations in the areas that were regularly impacted by fronts (river estuaries, bank slopes, straits). Macrobenthic species diversity, depth, 11-year average of nutrient concentration and sediment type explained best how strong the nutrient-invertebrate relationships were. The deposit feeders, that inhabited more diverse communities, were less sensitive to the increased concentration of nutrients than those in less diverse communities. On the other hand, the sensitivity of suspension feeders to rising nutrient load increased with benthic diversity. The response of macrozoobenthos to nitrogen level decreased with increasing depth. Our data did not support the hypothesis that there was a significant difference in the occurrence of nutrient-invertebrate relationships between hypoxic and normoxic conditions. The probability of finding negative nutrient-invertebrate relationships increased with depth. The results pointed to nitrogen limitation in the coarse and fine sediments and phosphorus limitation in the mixed sediments. Increased nitrogen values strengthened the response of suspension feeders to the concentration of phosphorus. Increasing phosphorus level dampened the relationships between benthic functions and concentration of phosphorus. This study confirmed that depth and sediment type were the best regularly monitored abiotic variables that could be used to determine the type areas within the northern Baltic Sea in sensu the European Community Water Framework Directive. As the nutrient-invertebrate relationships were significantly modified by macrobenthic diversity, the environmental classification should incorporate specific biological measures such as benthic diversity in order to better describe the quality status of the water body. [ABSTRACT FROM AUTHOR]

Several species of bivalves coexist at the lower intertidal of large tidal flats located in the enclosed or inland coast of the northern area of the Nord-Patagonic archipelagos on the Chilean coast (ca. 40-42°S): Tagelus dombeii (Lamarck), Mulinia edulis (King & Broderip), Venus antiqua King & Broderip, Semele solida (Gray), Gari solida (Gray) and Diplodonta insconspicua Philippi. To explore possible spatial variation in the community structure of the macroinfauna inhabiting sediments with different assemblages of these bivalves, seasonal sampling was carried out during 2003-2004 at two tidal flats of that area. Higher species richness and specimen densities of the macroinfauna occurred in sediments with the higher densities of bivalves, especially in sediments where the deep burrower T. dombeii reaches its greatest abundances. Our results suggest that, apart from presence of bivalves, the burrowing depth of these organisms is also important in promoting the abundance of macroinfauna. Our results are in contrast with earlier conceptualizations for community organization of the soft bottom macroinfauna inhabiting intertidal flats, related to biological interactions occurring among different phyletic groups, such as that arguing that suspension feeding bivalves (such as T. dombeii and V. antiqua) will negatively affect the recruitment of species with planktonic larvae, by filtering them before they become established in the substrate. Thus, it is concluded that beneficial effects of bivalve bioturbation overcome that negative effects on the macroinfauna, although detrimental effects may well occur at bivalve densities higher than those studied here. [ABSTRACT FROM AUTHOR]

The sea urchin Paracentrotus lividus (Lamarck) (Echinodermata: Echinoidea) is an Atlanto-Mediterranean species abundant in the littoral zone, where it occurs in the sublittoral down to 20 m. The aim of our work is to investigate the genetic patterns of P. lividus along the South Tyrrhenian coasts. Five specimens were collected in six localities, from the Gulf of Naples and the Cilento coast. The nuclear rDNA ITS2 spacer and the two mitochondrial genes 16S and COI were used for the analysis. The three markers utilised did not show any structure among populations from the Gulf of Naples. All populations appear to be polyphyletic, with Cilento samples more differentiated from the others. This suggests the existence of phylogeographic structure at larger geographic scale. Absence of genetic structure has been interpreted taking into consideration theoretical dispersal of the planktotrophic larvae, which can survive for 4-8 weeks before settlement, marine current patterns and persistence of the species in the area. [ABSTRACT FROM AUTHOR]

Phytoplankton succession and sinking rates were studied from January to December 2003 at a coastal station in the Gulf of Trieste (northern Adriatic Sea), 200 m offshore, in a relatively undisturbed area. A conical sediment trap, moored at 15 m depth (water depth 17 m), was used. The hypothesis if the presence of benthic and epiphytic diatoms can lead to an overestimation of the vertical fluxes was tested. To evaluate primary and secondary sedimentation contributions, planktonic, benthic and epiphytic diatoms were distinguished. Benthic species abundance varied throughout the year and it was related to resuspension that strongly influenced sinking rates. All over the year, diatoms were the prevailing class in the trap material accounting for 75.32% of the settled cells, while flagellates represented 24.11%. Dinophyceae and resting cells constituted minor components, accounting for 0.43% and 0.14%, respectively. The gross sedimentation rates ranged from 0.006 × 108 cell m−2 d−1 in the second week of May to 6.30 × 108 cell m−2 d−1 in the third week of January with a mean annual value of 1.09 ± 1.43 × 108 cell m−2 d−1. To the primary sedimentation rate Pseudo-nitzschia seriata of the group "Nitzschia seriata complex" contributed for 49.77% followed by Chaetoceros spp. (23.88%). The major contributor to the secondary sedimentation rate was the diatom Paralia sulcata, accounting for 24.76%. Epiphytic diatoms contributed for 11.19% and 12.27% on annual average gross abundance and biomass, respectively, reaching even 72.04% of gross abundance and 56.06% of gross biomass in the second week of August. The correlation between temperature and the logarithm of the epiphytic biomass was statistically significant, with r = 0.66 and P < 0.001. Both in the cluster analysis and in the PCA four main groups were formed, where benthic and epiphytic species were separately gathered. Planktonic, benthic and epiphytic forms accounted for 50.78%, 36.95% and 12.27%, respectively, calculated on the annual average biomass. Therefore, vertical fluxes can be overestimated of 50% or more if benthic and epiphytic species are not rejected. [ABSTRACT FROM AUTHOR]

Recently a new index has been proposed for the evaluation of biodiversity: taxonomic distinctness. One of the positive features of this index is that it is neither sampling-effort nor sample-size dependent. Until now, its application has been limited to the assessment of zoobenthos and fish biodiversity. The main objective of this paper was to test the applicability of this index to the macroalgal flora of the Gulf of Trieste (Northern Adriatic Sea). For this purpose the flora recently censused in this area was compared with a checklist of the entire region compiled from the literature. Two indices were mainly used for this study: average taxonomic distinctness based on presence/absence data (AvTD), and variation in taxonomic distinctness (VarTD). Their relationship with species richness was also assessed. The distinctness was compared with statistically significant limits estimated using randomisation tests made on the local master species list. On the same data set multivariate analysis based on a taxonomic similarity index was performed, and a 2nd stage MDS was used to compare results at four taxonomic levels. The results confirmed that statistical over-threshold situations can be highlighted only by one index (AvTD or VarTD) or only by their relationship (AvTD vs VarTD) and not necessarily at the same time by both indices and their relationship. While the average distinctness (AvTD) did not show values significantly different from the expected ones, the variation (VarTD) in one site showed values significantly exceeding confidence limits. This situation has already been described for zoobenthic communities and explained as a consequence of a decrease in habitat diversity. In this case it might be the result of the reduced presence of hard substrata suitable for macroalgal colonisation. The joint analysis of both parameters (AvTD vs VarTD) revealed one site exceeding the 95% confidence limit, which was not identified by analysing only one parameter at a time. This significant over-threshold pattern in the relationship of the distinctness indices could be explained by a relative increase of Rhodophyceae, attributable to the intensive grazing of the sea urchins at this site. The analysis of taxonomic distinctness indices at each site compared with the 95% probability funnels or ellipses derived from the regional species pool gave results consistent with the ones obtained using multivariate analysis. The results of this study suggest that the method may have more general validity. [ABSTRACT FROM AUTHOR]

Monitoring the extension of seagrass meadows over time is of primary importance for the surveillance of marine coastal biodiversity. Here, we analyse the evolution of the meadow of Cymodocea nodosa in the Gulf of Tigullio, a coastal tract of naturalistic interest but subjected to high anthropogenic pressure. Historical maps at a scale 1:25,000 of C. nodosa meadow drawn in 1986, 1991 and 2001 were processed with GIS (Geographical Information System), using overlay vector methods. Diachronic analyses allowed the measurements of temporal changes, in term of percentage gain or loss of meadow extension, through concordance and discordance maps. A general increase in the extension of the meadow from 1986 to 1991 was evidenced, but the disparity of mapping methods (SCUBA diving in 1986, Side Scan Sonar in 1991) in the two surveys imposes caution when interpreting this result. On the other hand, the comparison of 1991 and 2001 maps, both derived from Side Scan Sonar surveys, showed a regression of the meadow of about 60% in the northern area, and modifications in the upper and lower limits of the meadow due to the impact of coastal works. C. nodosa meadow showed the only enlargement in front of the mouth of the Entella River, due to the increase in nutrient contents for rainfall in the period 1988-1994. The overall analysis evidenced a net decrease in seagrass meadow extension, an early warning of risk for marine coastal biodiversity in the Gulf of Tigullio. [ABSTRACT FROM AUTHOR]

The Black Sea ecosystem and diversity underwent dramatic adverse changes during the 1960s and, especially, 1970s and 1980s of the last century. Anthropogenically-induced eutrophication increased through greater biogenic flow, dumping and pollutant discharge, in turn causing red tides, fish kills and oxygen depletion over the northwestern shelf. Anthropogenic pressures, associated with the economic situation of the Black Sea countries, has decreased during the last decade, allowing some improvement in the state and biodiversity of the ecosystem. The abundances of several native species have increased. However, mediterranization—the invasion by species from the adjacent basin and beyond—has continued. The conclusion is grounded, that biodiversity is not only inter- and intra-species diversity but also spatial-temporal variability, abundance and productivity dynamics, differences of the metabolic strategies providing sustainable existence in the changing environment. Biodiversity at the intraspecies level expresses itself in spatial and temporal variations of the Black Sea biota. It has been shown, that preservation of the Black Sea ecosystem's biodiversity must be based on the measures which should be undertaken in national and social spheres, and be directed to the recreation, stabilization and conservation of this unique sea basin. Measures must be implemented nationally to conserve, stabilize or recreate the ecosystem biodiversity of this unique sea basin. [ABSTRACT FROM AUTHOR]

Present-day Mediterranean marine biodiversity is undergoing rapid alteration. Because of the increased occurrence of warm-water biota, it has been said that the Mediterranean is under a process of ‘tropicalization'. This paper analyses the main patterns of the Mediterranean Sea tropicalization and considers briefly its extent and consequences. As happened during previous interglacial phases of the Quaternary, Atlantic water, entering via the Straits of Gibraltar, carries into the Mediterranean species that are prevalently of (sub)tropical affinity. On the other side of the basin, Red Sea species penetrate through the Suez Canal, a phenomenon called lessepsian migration from the name of F. de Lesseps, the French engineer who promoted the cutting of the Canal. Also the many exotic species introduced by humans voluntarily or involuntarily are nearly always typical of warm waters. Climate change combines with Atlantic influx, lessepsian migration and the introduction of exotic species by humans to the establishment of tropical marine biota in the Mediterranean Sea. Present-day warming ultimately favours the spread of warm-water species through direct and indirect effects, and especially by changing water circulation. It is impossible at present to foresee to what extent the exuberance of warm-water species will affect the trophic web and the functioning of marine ecosystems in the Mediterranean Sea of tomorrow. While Mediterranean Sea communities are modifying their pattern of species composition, they do not seem to be acquiring a more marked tropical physiognomy: Mediterranean coastal marine ecosystems are still dominated by fron-dose algae (even if the species that are gaining ascendancy are of tropical origin) and not by corals as is normal in tropical seas. [ABSTRACT FROM AUTHOR]

Global average surface temperatures are expected to rise by about 1.4-5.8°C from the present until the year 2100. This temperature increase will affect all ecosystems on earth. For shallow lakes-which can be either in a clear water or a turbid state-this climate change will expectedly negatively affect water transparency though the prediction is far from conclusive and experimental investigations elucidating the potential climatic effects on shallow lakes are still rare. The aim of this study was to further shape and sharpens hypotheses on the impact of climate change on shallow lakes by applying an existing and well-calibrated ecosystem model, PCLake. We focused on asymptotic model behaviour for a range of temperature and loading scenarios in a factorial design. We conclude that climate change will likely lead to decreased critical nutrient loadings. Combined with an expected increase in the external nutrient loading, this will increase the probability of a shift from a clear to a turbid state. As the model predicts a higher summer chlorophyll-a concentration, a stronger dominance of cyanobacteria during summer and a reduced Zooplankton abundance due to climate change, the turbid state itself is likely to become even more severe. [ABSTRACT FROM AUTHOR]

Shallow lakes have become the archetypical example of ecosystems with alternative stable states. However, since the early conception of that theory, the image of ecosystem stability has been elaborated for shallow lakes far beyond the simple original model. After discussing how spatial heterogeneity and fluctuation of environmental conditions may affect the stability of lakes, we review work demonstrating that the critical nutrient level for lakes to become turbid is higher for smaller lakes, and seems likely to be affected by climatic change too. We then show how the image of just two contrasting states has been elaborated. Different groups of primary producers may dominate shallow lakes, and such states dominated by a particular group may often represent alternative stable states. In tropical lakes, or small stagnant temperate waters, freefloating plants may represent an alternative stable state. Temperate shallow lakes may be dominated alternatively by charophytes, submerged angiosperms, green algae or cyanobacteria. The change of the lake communities along a gradient of eutrophication may therefore be seen as a continuum in which gradual species replacements are interrupted at critical points by more dramatic shifts to a contrasting alternative regime dominated by different species. The originally identified shift between a clear and a turbid state remains one of the more dramatic examples, but is surely not the only discontinuity that can be observed in the response of these ecosystems to environmental change. [ABSTRACT FROM AUTHOR]

We analysed lake smelt (Osmerus eperlanus eperlanus m. spirinchus Pallas.) population dynamics in relation to water level and temperature in Lake Peipsi, Estonia/Russia, using commercial fishery statistics from 1931 to 2004 (excluding 1940-1945). Over this period, smelt provided the greatest catch of commercial fish although its stock and catches have gradually decreased. At times, catches of smelt were quite variable with a cyclic character. Disappearance of smelt from catches in years 1973-1975 was the result of summer fish kill. Regression analysis revealed a significant negative effect of high temperature on the abundance of smelt stock, while the effect of water level was not significant. Our results suggest that critical factors for the smelt population are the absolute value of water temperature in the hottest period (≥20°C) of summer and the duration of this period. These weather parameters have increased in synchrony with smelt decline during the last 7 decades. There appeared to be a significant negative effect of hot summers on the abundance of smelt operating with a lag of one and 2 years, which can be explained by the short life cycle (mainly 1-2 years) of this species. [ABSTRACT FROM AUTHOR]

There is increasing concern about the effect of climate change on aquatic systems. We examined changes in macroinvertebrate communities caused by increased temperature (3°C above ambient during summer only and continuous 3°C above ambient all year round), influences of fish (Gasterosteus aculeatus L.) and addition of nutrients (nitrogen and phosphorus) in 48 large-scale (3000 1) tanks over a 2 year period. While numbers of Isopoda, Chaoborus, Corixidae, Ephemeroptera, Notonectidae and Odonata were reduced by the presence of fish, nutrient addition caused isopods, corixids, mayflies and odonates to increase in abundance. Impacts of temperature increase were surprisingly low, with only gastropods increasing in heated tanks, suggesting that, overall abundances of most macroinvertebrate taxa will not be severely affected by the predicted temperature rise. To determine if taxa were sampled representatively during the experiment, net sweep samples taken towards the end of the experiment were compared with final macroinvertebrate abundances when the complete contents of each tank were harvested. We found that net sweeping is an appropriate semi-quantitative method for most taxa in mesocosm tanks. However, mites, coleopteran adults and larvae, dipterans and Chaoborus were not adequately sampled. This might explain why we could not detect any treatment effects of temperature, fish or nutrients on mites, coleopterans and dipterans and calls for different sampling techniques for these taxa, especially in ponds with vegetation stands. [ABSTRACT FROM AUTHOR]

External phosphorus load to a wetland with two shallow lakes in the Botshol Nature Reserve, The Netherlands, was reduced, resulting in a rapid reduction of phytoplankton biomass and turbidity, and after 4 years, explosive growth of Characeae. The clear water state was unstable, however, and the ecosystem then alternated between clear, high-vegetation and turbid, lowvegetation states. A model of water quality processes was used in conjunction with a 14-year nutrient budget for Botshol to determine if fluctuations in precipitation and nutrient load caused the ecosystem instability. The results indicate that, during wet winters when groundwater level rose above surface water level, phosphorus from runoff was stored in the lake bottom and banks. Stored phosphorus was released the following spring and summer under anaerobic sediment conditions, resulting in increased phytoplankton density and light attenuation in the water column. During years with high net precipitation, flow from land to surface water also transported humic acids, further increasing light attenuation. In years with dry winters, the phosphorus and humic acid loads to surface water were reduced, and growth of submerged macrophytes was enhanced by clear water. Thus, the temporal pattern of precipitation and flow from land to water gave a coherent, quantitative explanation of the observed dynamics in phosphorus, phytoplankton, turbidity, and Characeae. Global warming has caused winters in The Netherlands to become warmer and wetter during the last 50 years, increasing flow from land to water of humic acids and phosphorus and, ultimately, enhancing instability of Characeae populations. In the first half of the 20th century interannual variation in precipitation was not sufficient to cause large changes in internal P flux in Botshol, and submerged macrophyte populations were stable. [ABSTRACT FROM AUTHOR]

Climate change is likely to have farreaching effects on biotic interactions in aquatic ecosystems. We investigated the effect of different spring warming scenarios on the succession of three algal groups (cyanobacteria, diatoms and green algae) in 10-1 microcosms. We fitted these microcosm data to a simple mechanistic model to estimate the effect of different climate warming scenarios on the population dynamics of these algal functional groups. Experimental and model results indicate that the different algal functional groups respond differently to climate warming under phosphorus-limited conditions. Whereas the successional sequence, from diatoms to green algae to cyanobacteria, was not affected by the different climate warming scenarios, cyanobacteria showed a stronger response to the different climate warming scenarios than diatoms or green algae. Both the growth rates and peak abundances of cyanobacteria were significantly higher in the average and warm spring scenarios than in the cold spring scenario. Our findings illustrate that integration of models and microcosm experiments are a useful approach in predicting the impacts of rising temperatures on the dynamics of phytoplankton communities. [ABSTRACT FROM AUTHOR]

The submerged macrophyte vegetation of lakes created after enclosing former estuaries, situated in the central and southwestern part of the Netherlands, has been monitored annually from 1992 onwards. Between 1992 and 2004, pronounced changes in overall cover and species composition of the submerged vegetation have occurred, resulting from changes of water quality and morphology in the lakes. In most cases vegetation cover and species diversity increased or remained stable, with the exception of two lakes in the southwest part of the country. Abundance and species composition were assessed according to the requirements of the EU Water Framework Directive, using the assessment procedure proposed to assess macrophytes in natural water bodies in the Netherlands. The assessment procedure included calculation of the ‘ecological quality ratio' (EQR) for each of eleven water bodies in each of 13 years, based on transect monitoring data. The EQR indicating Good Ecological Status for Macrophytes was achieved in only three of the lakes. The consequences of hydromorphological modifications, and measures necessary to achieve the desired condition are discussed. Nutrient concentrations should be reduced further, while additional management measures are necessary to improve conditions for macrophytes. [ABSTRACT FROM AUTHOR]

The European Water Framework Directive offers an unprecedented opportunity for improvement of ecological quality of both freshwater and marine systems. It has implications for every aspect of how catchments are used by human societies and could potentially mean a step change in how waters and catchments are managed. It must be implemented, however, by official bodies, which seem likely to apply ecologically outdated approaches, used in the past simply to manage water quality, to tackle the very different problem of improving ecological quality. Ecological quality can be characterised by parsimony of available nutrients, characteristic physical and biological structure, strong connectivity among systems and mechanisms of resilience to cope with normal, natural change. The implications of these are that high quality systems in a given location do not have unique lists of species and single formulae for how the biodiversity is constituted. They have considerable inherent variability whilst preserving their fundamental functional characteristics. This appears not to have been recognised by official bodies that seek simple taxonomic indices as measures of quality. To some extent this is a function of the way the Directive has been written, but a slavish adherence to this approach may undermine the spirit of the Directive and result in a failure to bring about the fundamental reform that is needed. [ABSTRACT FROM AUTHOR]