1. Transcriptomic Analysis Identifies A Tolerogenic Dendritic Cell Signature.
- Author
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Robertson H, Li J, Kim HJ, Rhodes JW, Harman AN, Patrick E, and Rogers NM
- Subjects
- Databases, Genetic, Dendritic Cells drug effects, Dendritic Cells metabolism, Humans, Lipopolysaccharides pharmacology, Phenotype, Predictive Value of Tests, Reproducibility of Results, Dendritic Cells immunology, Gene Expression Profiling, Immune Tolerance genetics, Transcriptome
- Abstract
Dendritic cells (DC) are central to regulating innate and adaptive immune responses. Strategies that modify DC function provide new therapeutic opportunities in autoimmune diseases and transplantation. Current pharmacological approaches can alter DC phenotype to induce tolerogenic DC (tolDC), a maturation-resistant DC subset capable of directing a regulatory immune response that are being explored in current clinical trials. The classical phenotypic characterization of tolDC is limited to cell-surface marker expression and anti-inflammatory cytokine production, although these are not specific. TolDC may be better defined using gene signatures, but there is no consensus definition regarding genotypic markers. We address this shortcoming by analyzing available transcriptomic data to yield an independent set of differentially expressed genes that characterize human tolDC. We validate this transcriptomic signature and also explore gene differences according to the method of tolDC generation. As well as establishing a novel characterization of tolDC, we interrogated its translational utility in vivo , demonstrating this geneset was enriched in the liver, a known tolerogenic organ. Our gene signature will potentially provide greater understanding regarding transcriptional regulators of tolerance and allow researchers to standardize identification of tolDC used for cellular therapy in clinical trials., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Robertson, Li, Kim, Rhodes, Harman, Patrick and Rogers.)
- Published
- 2021
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