Search

Deep learning (DL) in magnetic resonance imaging (MRI) shows excellent performance in image reconstruction from undersampled k-space data. Artifact-free and high-quality MRI reconstruction is essential for ensuring accurate diagnosis, supporting clinical decision-making, enhancing patient safety, facilitating efficient workflows, and contributing to the validity of research studies and clinical trials. Recently, deep learning has demonstrated several advantages over conventional MRI reconstruction methods. Conventional methods rely on manual feature engineering to capture complex patterns and are usually computationally demanding due to their iterative nature. Conversely, DL methods use neural networks with hundreds of thousands of parameters and automatically learn relevant features and representations directly from the data. Nevertheless, there are some limitations to DL-based techniques concerning MRI reconstruction tasks, such as the need for large, labeled datasets, the possibility of overfitting, and the complexity of model training. Researchers are striving to develop DL models that are more efficient, adaptable, and capable of providing valuable information for medical practitioners. We provide a comprehensive overview of the current developments and clinical uses by focusing on state-of-the-art DL architectures and tools used in MRI reconstruction. This study has three objectives. Our main objective is to describe how various DL designs have changed over time and talk about cutting-edge tactics, including their advantages and disadvantages. Hence, data pre- and post-processing approaches are assessed using publicly available MRI datasets and source codes. Secondly, this work aims to provide an extensive overview of the ongoing research on transformers and deep convolutional neural networks for rapid MRI reconstruction. Thirdly, we discuss several network training strategies, like supervised, unsupervised, transfer learning, and federated learning for rapid and efficient MRI reconstruction. Consequently, this article provides significant resources for future improvement of MRI data pre-processing and fast image reconstruction.

We present a deep learning-based method that corrects motion artifacts and thus accelerates data acquisition and reconstruction of magnetic resonance images. The novel model, the Motion Artifact Correction by Swin Network (MACS-Net), uses a Swin transformer layer as the fundamental block and the Unet architecture as the neural network backbone. We employ a hierarchical transformer with shifted windows to extract multiscale contextual features during encoding. A new dual upsampling technique is employed to enhance the spatial resolutions of feature maps in the Swin transformer-based decoder layer. A raw magnetic resonance imaging dataset is used for network training and testing; the data contain various motion artifacts with ground truth images of the same subjects. The results were compared to six state-of-the-art MRI image motion correction methods using two types of motions. When motions were brief (within 5 s), the method reduced the average normalized root mean square error (NRMSE) from 45.25% to 17.51%, increased the mean structural similarity index measure (SSIM) from 79.43% to 91.72%, and increased the peak signal-to-noise ratio (PSNR) from 18.24 to 26.57 dB. Similarly, when motions were extended from 5 to 10 s, our approach decreased the average NRMSE from 60.30% to 21.04%, improved the mean SSIM from 33.86% to 90.33%, and increased the PSNR from 15.64 to 24.99 dB. The anatomical structures of the corrected images and the motion-free brain data were similar. [ABSTRACT FROM AUTHOR]

This article describes a novel approach for enhancing the three-dimensional (3D) point cloud reconstruction for light field microscopy (LFM) using U-net architecture-based fully convolutional neural network (CNN). Since the directional view of the LFM is limited, noise and artifacts make it difficult to reconstruct the exact shape of 3D point clouds. The existing methods suffer from these problems due to the self-occlusion of the model. This manuscript proposes a deep fusion learning (DL) method that combines a 3D CNN with a U-Net-based model as a feature extractor. The sub-aperture images obtained from the light field microscopy are aligned to form a light field data cube for preprocessing. A multi-stream 3D CNNs and U-net architecture are applied to obtain the depth feature fromthe directional sub-aperture LF data cube. For the enhancement of the depthmap, dual iteration-based weighted median filtering (WMF) is used to reduce surface noise and enhance the accuracy of the reconstruction. Generating a 3D point cloud involves combining two key elements: the enhanced depth map and the central view of the light field image. The proposed method is validated using synthesized Heidelberg Collaboratory for Image Processing (HCI) and real-world LFM datasets. The results are compared with different state-of-the-art methods. The structural similarity index (SSIM) gain for boxes, cotton, pillow, and pens are 0.9760, 0.9806, 0.9940, and 0.9907, respectively. Moreover, the discrete entropy (DE) value for LFM depth maps exhibited better performance than other existing methods. [ABSTRACT FROM AUTHOR]

We propose a dual-domain deep learning technique for accelerating compressed sensing magnetic resonance image reconstruction. An advanced convolutional neural network with residual connectivity and an attention mechanism was developed for frequency and image domains. First, the sensor domain subnetwork estimates the unmeasured frequencies of k-space to reduce aliasing artifacts. Second, the image domain subnetwork performs a pixel-wise operation to remove blur and noisy artifacts. The skip connections efficiently concatenate the feature maps to alleviate the vanishing gradient problem. An attention gate in each decoder layer enhances network generalizability and speeds up image reconstruction by eliminating irrelevant activations. The proposed technique reconstructs real-valued clinical images from sparsely sampled k-spaces that are identical to the reference images. The performance of this novel approach was compared with state-of-the-art direct mapping, single-domain, and multi-domain methods. With acceleration factors (AFs) of 4 and 5, our method improved the mean peak signal-to-noise ratio (PSNR) to 8.67 and 9.23, respectively, compared with the single-domain Unet model; similarly, our approach increased the average PSNR to 3.72 and 4.61, respectively, compared with the multi-domain W-net. Remarkably, using an AF of 6, it enhanced the PSNR by 9.87 ± 1.55 and 6.60 ± 0.38 compared with Unet and W-net, respectively. [ABSTRACT FROM AUTHOR]

Simple Summary: Skin cancer is a life-threatening condition. It is difficult to diagnose in its early stages; therefore, we proposed an easy-to-use telemedicine device to tackle skin cancer without expert intervention. The deep learning model automatically detects skin cancer patches on lesions with a credit-card-sized device named Raspberry Pi and a small camera. This paper also presents a digital hair removal algorithm to enhance the quality of medical images for better analysis by medical experts and AI methods. Our method does not need an expert operator; even ordinary people can use it with the instruction manual. It will be useful for developing countries or remote places when there is a scarcity of oncologists. Cancer remains a deadly disease. We developed a lightweight, accurate, general-purpose deep learning algorithm for skin cancer classification. Squeeze-MNet combines a Squeeze algorithm for digital hair removal during preprocessing and a MobileNet deep learning model with predefined weights. The Squeeze algorithm extracts important image features from the image, and the black-hat filter operation removes noise. The MobileNet model (with a dense neural network) was developed using the International Skin Imaging Collaboration (ISIC) dataset to fine-tune the model. The proposed model is lightweight; the prototype was tested on a Raspberry Pi 4 Internet of Things device with a Neo pixel 8-bit LED ring; a medical doctor validated the device. The average precision (AP) for benign and malignant diagnoses was 99.76% and 98.02%, respectively. Using our approach, the required dataset size decreased by 66%. The hair removal algorithm increased the accuracy of skin cancer detection to 99.36% with the ISIC dataset. The area under the receiver operating curve was 98.9%. [ABSTRACT FROM AUTHOR]

This paper employs a unique sensor fusion (SF) approach to detect a COVID-19 suspect and the enhanced MobileNetV2 model is used for face mask detection on an Internet-of-Things (IoT) platform. The SF algorithm avoids incorrect predictions of the suspect. Health data are continuously monitored and recorded on the ThingSpeak cloud server. When a COVID-19 suspect is detected, an emergency email is sent to healthcare personnel with the GPS position of the suspect. A lightweight and fast deep learning model is used to recognize appropriate mask positioning; this restricts virus transmission. When tested with the real-world masked face dataset (RMFD) dataset, the enhanced MobileNetV2 neural network is optimal for Raspberry Pi. Our IoT device and deep learning model are 98.50% (compared to commercial devices) and 99.26% accurate, respectively, and the time required for face mask evaluation is 31.1 milliseconds. The proposed device is useful for remote monitoring of covid patients. Thus, the method will find medical application in the detection of COVID-19-positive patients. The device is also wearable. [ABSTRACT FROM AUTHOR]