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The synthesis of 6-chloro-3-chloromethyl-1,2,4-triazolo[4,3-b]pyridazine and its vicarious nucleophilic substitution products are described and characterized by spectroscopic methods and X-ray diffraction. The lipophilicities of the title compound, its acetate, and the derived 3-methyl tetrazolopyridazine have been measured and correlated with the chlorine substitution. The title compound co-crystallizes with acetic acid in the structure of the same symmetry and very similar layered arrangement as the crystals of its acetoxymethyl analog, despite the considerably different substituents and intermolecular contacts. The details of the intermolecular interactions are discussed. [ABSTRACT FROM AUTHOR]

Trimethyl(trifluoromethyl)silane, (CH3)3SiCF3, has been in situ pressure frozen in a diamond anvil cell and its structure determined at 0.90(5) GPa/296 K by single-crystal X-ray diffraction. The crystal is monoclinic, space group P21/m, with the molecules lying on crystallographic mirror planes. The CH3 and CF3 groups assume the fully staggered conformation. The 14-fold coordination scheme of the molecules is similar to those in (CH3)3SiCl polymorphs, but different from that in crystalline tetramethylsilane, (CH3)4Si (TMS). The longest Si—C bond length of 1.943(12) Å observed in the crystal structure has been documented. The shortest intermolecular contacts in the structure of pressure-frozen CF3Si(CH3)3 are observed between the hydrogen atoms, and those involving fluorine atoms are longer than sums of van der Waals’ radii. These structural features explain the facile cleavage of Si—CF3 bond for CF3 group transfer in organic reactions. [Copyright &y& Elsevier]

The structures of a series of the simplest aliphatic amines determined at high pressure by single crystal X-ray diffraction reveal systematic structure property relations involving intermolecular interactions and molecular symmetries. Five new polymorphs have been found: one of methylamine (phase II, space group Fdd2), two of dimethylamine (phase I, space group C2/c and phase II, P21/c), and two of trimethylamine (phase II, space group P21/n and phase III, P21/m). The methylamine and dimethylamine molecules are arranged according to the NH...N hydrogen bonds. The phase diagrams of methylamines have been outlined up to 6 GPa. [ABSTRACT FROM AUTHOR]

Abstract: The ionophoric antibiotic lasalocid acid has been converted to a novel 6-bromohexyl ester (LASBR) and its structure has been determined in the crystal by X-ray diffraction and in solution by NMR and FT-IR methods. In the crystal two symmetry-independent LASBR molecules are present. The structure of LASBR in solution is slightly different because the strongest intramolecular C(1)Hogen bond in the pseudo-aromatic ring becomes partially broken and a new hydrogen bond between O(4)H and carbonyl group C(13)ed. LASBR forms complexes with Li+, Na+ and K+ cations of exclusively 1:1 stoichiometry. The structures of complexes have been studied and visualized using semi-empirical calculation based on results of spectrometric and spectroscopic investigation. It is demonstrated that in contrast to lasalocid acid the novel ester forms preferential complexes with Li+ cation. [Copyright &y& Elsevier]

Abstract: 4-Nitrophenyl[bis(benzylthio)]methane was synthesized and used in structural study by X-ray diffraction combined with NMR and spectrophotometric method. In the crystal structure the molecule assumes the conformation where the acidic H-atom is difficult to access due to sterical hindrances of three surrounding phenyls. The acidic properties of 4-nitrophenyl[bis(benzylthio)]methane have been compared and discussed with the analogous disulfonyl carbon acid 4-nitrophenyl[bis(benzylsulfonyl)]methane. [Copyright &y& Elsevier]

Abstract: Intermolecular interactions in a synthesized C-acid, 4-nitrophenyl[bis(ethylsulfonyl)]methane have been analysed and its structure determined by X-ray diffraction. The molecular packing in the crystal is governed by CH…O. The dimensions of the hydrogen bonds and the shortest non-bonded distances are also determined. The possible implications in the formation of the hydrogen bonded complexes with the strong organic bases are also discussed. [Copyright &y& Elsevier]

The structures of 1,3-bis(3-hydroxymethylpyridinium)propane dibromide ( 1 ), 1,3-bis(3-hydroxymethylpyridinium)propane tetrabromozincate ( 2 ) and 1,3-bis(3-hydroxymethylpyridinium)propane tetrabromocuprate ( 3 ) have been studied by X-ray diffraction, DFT, FTIR, NMR and UV–vis methods. The crystal structures of three analogous compounds are significantly different: 1 is orthorhombic, space group Fdd 2, Z = 8, 2 is triclinic, space group P 1 ¯ , Z = 2 and 3 is monoclinic, space group C 2 /c , Z = 8. The bispyridinium dication in 1 lies on the special position on the 2-fold axis. Each 3-hydroxymethyl group forms an OH⋯Br hydrogen bond, and the dications combine into three-dimensional networks through numerous CH⋯Br bonds. The IR spectra of the dibromide of 1,3-bis(3-hydroxymethylpyridinium)propane ( 1 ) and its tetrabromometallates ( 2 and 3 ) were compared and their interpretation was confirmed by calculated spectra. UV–vis spectra for tetrabromocuprate salt ( 3 ) showed significant differences between solid-phase and water solution. [ABSTRACT FROM AUTHOR]

The 1:2 complex ( 1 ) of dimethylphenyl betaine (DMPB) with two molecules of 2,6-dichloro-4-nitro-phenol (DCNP) was prepared and characterized by X-ray diffraction, B3LYP/6-311++G(d,p) and B3LYP-D3/6-311++G(d,p)calculations, FTIR and NMR spectroscopies. The crystal is monoclinic, space group P 2 1 / c with Z = 4. The protons at the oxygen atoms of phenols are bonded to each oxygen atoms of the DMPB carboxylate group by two nonequivalent H-bonds with the O H⋯O distances of 2.473(5) and 2.688(4) Å. Both H-bonds in the optimized structures 2 (in vacuum), 3 (in DMSO solution) and dispersion-correlated functional (D3) 4 (in vacuum) are comparable and are slightly shorter than O(6) H(O6)⋯O(2) in the crystal. The FTIR spectrum of 1 shows a broad absorption in the 3400–2000 cm −1 region corresponding to a longer hydrogen bond and a broad absorption in the 1800–500 cm −1 region caused by the shorter H-bond. The relations between the experimental 13 C and 1 H chemical shifts ( δ exp ) of the investigated compound 1 in DMSO solution and GIAO/B3LYP/6-311++G(d,p) magnetic isotropic shielding constants ( σ calc ) obtained by using the screening solvation model (COSMO) for 3 are linear and reproduce well the experimental chemical shifts described by the equation: δ exp = a + b σ calc . [ABSTRACT FROM AUTHOR]

Abstract: The crystal structure of the 1:1 complex of lasalocid acid with 1,5,7-triazabicyclo[4.4.0]dec-5-ene (TBD) has been studied by X-ray diffraction, FT-IR spectroscopy and 1H NMR. The crystal space group is P212121 with a =11.401(2)Å, b =13.393(3)Å, c =30.063(6)Å and Z =4. In the crystal of the complex a cooperative system involving inter and intramolecular hydrogen bonds is formed. The protonated TBD and two ends of the lasalocid acid anion are hydrogen bonded. These NH⋯O hydrogen bonds are, with a length of 2.907(9) and 2.930(8)Å, relatively long. In the crystal structure the oxygen atoms of the carboxylate group are involved in three intramolecular hydrogen bonds of different length: O(4)O(1) of 2.848(7)Å, O(8)O(1) of 2.938(6)Å and O(3) O(2) of 2.460(8)Å. In chloroform and acetonitrile solutions the crystal structure of the 1:1 complex is only partially preserved, and additionally a new structure, in which the ketone carbonyl group is hydrogen bonded, is formed. The structures have been modeled using the semiempirical PM5 method. [Copyright &y& Elsevier]