13 results on '"Wallis, GA"'
Search Results
2. Metaphyseal chondrodysplasia type Schmid mutations are predicted to occur in two distinct three-dimensional clusters within type X collagen NC1 domains that retain the ability to trimerize.
- Author
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Marks DS, Gregory CA, Wallis GA, Brass A, Kadler KE, and Boot-Handford RP
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Biopolymers, Collagen metabolism, DNA Primers, Humans, Models, Molecular, Molecular Sequence Data, Recombinant Proteins genetics, Recombinant Proteins metabolism, Sequence Homology, Amino Acid, Collagen genetics, Mutation, Osteochondrodysplasias genetics
- Abstract
Metaphyseal chondrodysplasia type Schmid (MCDS) is caused by mutations in COL10A1 that are clustered in the carboxyl-terminal non-collagenous (NC1) encoding domain. This domain is responsible for initiating trimerization of type X collagen during biosynthesis. We have built a molecular model of the NC1 domain trimer based on the crystal structure coordinates of the highly homologous trimeric domain of ACRP30 (adipocyte complement-related protein of 30 kDa or AdipoQ). Mapping of the MCDS mutations onto the structure reveals two specific clusters of residues as follows: one on the surface of the monomer which forms a tunnel through the center of the assembled trimer and the other on a patch exposed to solvent on the exterior surface of each monomeric unit within the assembled trimer. Biochemical studies on recombinant trimeric NC1 domain show that the trimer has an unusually high stability not exhibited by the closely related ACRP30. The high thermal stability of the trimeric NC1 domain, in comparison with ACRP30, appears to be the result of a number of factors including the 17% greater total buried solvent-accessible surface and the increased numbers of hydrophobic contacts formed upon trimerization. The 27 amino acid sequence present at the amino terminus of the NC1 domain, which has no counterpart in ACRP30, also contributes to the stability of the trimer. We have also shown that NC1 domains containing the MCDS mutations Y598D and S600P retain the ability to homotrimerize and heterotrimerize with wild type NC1 domain, although the trimeric complexes formed are less stable than those of the wild type molecule. These studies suggest strongly that the predominant mechanism causing MCDS involves a dominant interference of mutant chains on wild type chain assembly.
- Published
- 1999
- Full Text
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3. The bcl-2 knockout mouse exhibits marked changes in osteoblast phenotype and collagen deposition in bone as well as a mild growth plate phenotype.
- Author
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Boot-Handford RP, Michaelidis TM, Hillarby MC, Zambelli A, Denton J, Hoyland JA, Freemont AJ, Grant ME, and Wallis GA
- Subjects
- Animals, Bone and Bones metabolism, Dwarfism metabolism, Dwarfism pathology, Growth Plate pathology, Immunoenzyme Techniques, Mice, Mice, Knockout, Osteoblasts physiology, Phenotype, Bone and Bones pathology, Collagen metabolism, Dwarfism genetics, Genes, bcl-2, Osteoblasts pathology
- Abstract
Histological examination of long bones from 1-day-old bcl-2 knockout and age-matched control mice revealed no obvious differences in length of bone, growth plate architecture or stage of endochondral ossification. In 35-day-old bcl-2 knockout mice that are growth retarded or 'dwarfed'. the proliferative zone of the growth plate appeared slightly thinner and the secondary centres of ossification less well developed than their age-matched wild-type controls. The most marked histological effects of bcl-2 ablation were on osteoblasts and bone. 35-day-old knockout mouse bones exhibited far greater numbers of osteoblasts than controls and the osteoblasts had a cuboidal phenotype in comparison with the normal flattened cell appearance. In addition, the collagen deposited by the osteoblasts in the bcl-2 knockout mouse bone was disorganized in comparison with control tissue and had a pseudo-woven appearance. The results suggest an important role for Bcl-2 in controlling osteoblast phenotype and bone deposition in vivo.
- Published
- 1998
- Full Text
- View/download PDF
4. Sequence elements within intron 1 of the human collagen X gene do not contribute to the regulation of gene expression.
- Author
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Chambers D, Thomas JT, Boam D, Wallis GA, Grant ME, and Boot-Handford RP
- Subjects
- Chloramphenicol O-Acetyltransferase biosynthesis, Genetic Vectors, Humans, Introns, Mutagenesis, Site-Directed, Polymerase Chain Reaction, Recombinant Proteins biosynthesis, Collagen biosynthesis, Collagen genetics, Gene Expression Regulation, Promoter Regions, Genetic
- Published
- 1996
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- View/download PDF
5. Mutations within the gene encoding the alpha 1 (X) chain of type X collagen (COL10A1) cause metaphyseal chondrodysplasia type Schmid but not several other forms of metaphyseal chondrodysplasia.
- Author
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Wallis GA, Rash B, Sykes B, Bonaventure J, Maroteaux P, Zabel B, Wynne-Davies R, Grant ME, and Boot-Handford RP
- Subjects
- Adolescent, Child, Child, Preschool, Exons, Female, Humans, Infant, Introns, Male, Mutation, Osteochondrodysplasias physiopathology, Pedigree, Polymorphism, Genetic, Polymorphism, Single-Stranded Conformational, Promoter Regions, Genetic, Collagen genetics, Osteochondrodysplasias genetics
- Abstract
Type X collagen is a homotrimer of alpha 1 (X) chains encoded by the COL10A1 gene. It is synthesised specifically and transiently by hypertrophic chondrocytes at sites of endochondral ossification. Point mutations and deletions in the region of the COL10A1 gene encoding the alpha 1 (X) carboxyl-terminal (NC1) domain have previously been identified in subjects with metaphyseal chondrodysplasia type Schmid (MCDS). To determine whether mutations in other regions of the gene caused MCDS or comparable phenotypes, we used PCR followed by SSCP to analyse the coding and promoter regions of the COL10A1 gene, as well as the intron/exon boundaries of five further subjects with MCDS, one subject with atypical MCDS, and nine subjects with other forms of metaphyseal chondrodysplasia. Using this approach, three of the subjects with MCDS were found to be heterozygous for the deletions 1864delACTT, 1956delT, and 2029delAC in the region of COL10A1 encoding the NC1 domain. These deletions would lead to alterations in the reading frame, premature stop codons, and the translation of truncated protein products. A fourth subject with MCDS was found to be heterozygous for a single base pair transition, T1894C, that would lead to the substitution of the amino acid residue serine at position 600 by proline within the NC1 domain. We did not, however, detect mutations in the coding and non-coding regions of COL10A1 in one subject with MCDS, the subject with atypical MCDS, and in the nine subjects with other forms of metaphyseal chondrodysplasia. We propose that the nature and distribution of mutations within the NC1 domain of COL10A1 causing MCDS argues against the hypothesis that the phenotype arises simply through haploinsufficiency but that an, as yet, unexplained mutation mechanism underlies this phenotype.
- Published
- 1996
- Full Text
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6. Substitutions of aspartic acid for glycine-220 and of arginine for glycine-664 in the triple helix of the pro alpha 1(I) chain of type I procollagen produce lethal osteogenesis imperfecta and disrupt the ability of collagen fibrils to incorporate crystalline hydroxyapatite.
- Author
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Culbert AA, Lowe MP, Atkinson M, Byers PH, Wallis GA, and Kadler KE
- Subjects
- Adult, Arginine genetics, Aspartic Acid genetics, Bone and Bones chemistry, Bone and Bones embryology, Calcification, Physiologic physiology, Collagen chemistry, Collagen metabolism, Cyanogen Bromide metabolism, Cyanogen Bromide pharmacology, Electrophoresis, Polyacrylamide Gel, Female, Glycine genetics, Heterozygote, Humans, Macromolecular Substances, Peptide Mapping, Pregnancy, Procollagen chemistry, Procollagen metabolism, Protein Structure, Secondary, Collagen genetics, Durapatite metabolism, Mutation, Osteogenesis Imperfecta genetics, Osteogenesis Imperfecta metabolism, Procollagen genetics
- Abstract
We identified two infants with lethal (type II) osteogenesis imperfecta (OI) who were heterozygous for mutations in the COL1A1 gene that resulted in substitutions of aspartic acid for glycine at position 220 and arginine for glycine at position 664 in the product of one COL1A1 allele in each individual. In normal age- and site-matched bone, approximately 70% (by number) of the collagen fibrils were encrusted with plate-like crystallites of hydroxyapatite. In contrast, approximately 5% (by number) of the collagen fibrils in the probands' bone contained crystallites. In contrast with normal bone, the c-axes of hydroxyapatite crystallites were sometimes poorly aligned with the long axis of fibrils obtained from OI bone. Chemical analysis showed that the OI samples contained normal amounts of calcium. The probands' bone samples contained type I collagen, overmodified type I collagen and elevated levels of type III and V collagens. On the basis of biochemical and morphological data, the fibrils in the OI samples were co-polymers of normal and mutant collagen. The results are consistent with a model of fibril mineralization in which the presence of abnormal type I collagen prevents normal collagen in the same fibril from incorporating hydroxyapatite crystallites.
- Published
- 1995
- Full Text
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7. Sequence comparison of three mammalian type-X collagen promoters and preliminary functional analysis of the human promoter.
- Author
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Thomas JT, Sweetman WA, Cresswell CJ, Wallis GA, Grant ME, and Boot-Handford RP
- Subjects
- Animals, Base Sequence, Cartilage metabolism, Cartilage pathology, Cattle genetics, Cells, Cultured, Collagen classification, Collagen metabolism, DNA, Complementary genetics, Epiphyses cytology, Exons genetics, Genes, Reporter, Growth Plate cytology, Humans, Hypertrophy, Mice genetics, Molecular Sequence Data, Sequence Alignment, Sequence Homology, Nucleic Acid, Species Specificity, Collagen genetics, Genes, Promoter Regions, Genetic
- Abstract
The mechanism(s) controlling the specific expression of the type-X collagen (COL10A1)-encoding gene in the growth plate of developing long bones is not known. In preparation for identifying and characterizing the 5'-regulatory sequences and transcription factors which control mammalian Col10a1 gene expression, we have isolated and sequenced the first exon and 5' flanking promoter regions of bovine Col10a1. Sequence comparisons, including those previously published for mouse Col10a1, highlighted a number of conserved domains within the promoter and upstream elements. Reporter cat gene (encoding chloramphenicol acetyltransferase, CAT) constructs containing 5'-regulatory sequences of human COL10a1 (hCOL10a1) were transfected into primary cultures of foetal bovine growth plate chondrocytes producing COL10A1 and non-producing epiphyseal cartilage chondrocytes. Constructs containing up to 900 bp of promoter sequence exhibited low levels of CAT production in expressing cells and non-expressing cells. Addition of a further 1.5 kb of upstream sequence resulted in a dramatic increase in CAT production in expressing cells only. The results demonstrate the presence of enhancer-like elements between 900 bp and 2.4 kb upstream of the transcription start point(s) of hCOL10a1, which is distinctly different from that reported for the chick.
- Published
- 1995
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8. Amino acid substitutions of conserved residues in the carboxyl-terminal domain of the alpha 1(X) chain of type X collagen occur in two unrelated families with metaphyseal chondrodysplasia type Schmid.
- Author
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Wallis GA, Rash B, Sweetman WA, Thomas JT, Super M, Evans G, Grant ME, and Boot-Handford RP
- Subjects
- Alleles, Amino Acid Sequence, Amino Acids genetics, Base Sequence, Child, Preschool, DNA, Female, Humans, Infant, Male, Molecular Sequence Data, Pedigree, Phenotype, Collagen genetics, Conserved Sequence, Mutation, Osteochondrodysplasias genetics
- Abstract
Type X collagen is a homotrimeric, short-chain, nonfibrillar extracellular-matrix component that is specifically and transiently synthesized by hypertrophic chondrocytes at the sites of endochondral ossification. The precise function of type X collagen is not known, but its specific pattern of expression suggests that mutations within the encoding gene (COL10A1) that alter the structure or synthesis of the protein may cause heritable forms of chondrodysplasia. We used the PCR and the SSCP techniques to analyze the coding and upstream promoter regions of the COL10A1 gene in a number of individuals with forms of chondrodysplasia. Using this approach, we identified two individuals with metaphyseal chondrodysplasia type Schmid (MCDS) with SSCP changes in the region of the gene encoding the carboxyl-terminal domain. Sequence analysis demonstrated that the individuals were heterozygous for two unique single-base-pair transitions that led to the substitution of the highly conserved amino acid residue tyrosine at position 598 by aspartic acid in one person and of leucine at position 614 by proline in the other. The substitution at residue 598 segregated with the phenotype in a family of eight (five affected and three unaffected) related persons. The substitution at residue 614 occurred in a sporadically affected individual but not in her unaffected mother and brother. Additional members of this family were not available for further study. These results suggest that certain amino acid substitutions within the carboxyl-terminal domain of the chains of the type X collagen molecule cause MCDS. These amino acid substitutions are likely to alter either chain recognition or assembly of the type X collagen molecule, thereby depleting the amount of normal type X collagen deposited in the extracellular matrix, with consequent aberrations in bone growth and development.
- Published
- 1994
9. Osteogenesis imperfecta type III: mutations in the type I collagen structural genes, COL1A1 and COL1A2, are not necessarily responsible.
- Author
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Wallis GA, Sykes B, Byers PH, Mathew CG, Viljoen D, and Beighton P
- Subjects
- Africa, Southern, Child, Female, Genes, Genes, Recessive, Genetic Linkage, Haplotypes, Humans, Male, Pedigree, Polymorphism, Restriction Fragment Length, Black People genetics, Collagen genetics, Osteogenesis Imperfecta genetics
- Abstract
Most forms of osteogenesis imperfecta are caused by dominant mutations in either of the two genes, COL1A1 and COL1A2, that encode the pro alpha 1(I) and pro alpha 2(I) chains of type I collagen, respectively. However, a severe, autosomal recessive form of OI type III with a comparatively high frequency has been recognised in the black populations of southern Africa. We preformed linkage analyses in eight OI type III families using RFLPs associated with the COL1A1 and COL1A2 loci to determine whether mutations in the genes for type I collagen were responsible for this form of OI. Recombination between the OI phenotype and polymorphic markers at both loci was shown in three of the eight families investigated. The combined lod scores for the eight families were -10.6 for COL1A1 and -11.2 for COL1A2. Further, we examined the type I procollagen produced by skin fibroblast cultures derived from 15 affected and 12 unaffected subjects from the above eight families plus one further family. We found no evidence for defects in the synthesis, structure, secretion, or post-translational modification of the chains of type I procollagen produced by any of the family members. These results suggest that mutations within or near the type I collagen structural genes are not responsible for this form of OI.
- Published
- 1993
- Full Text
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10. SSCP and segregation analysis of the human type X collagen gene (COL10A1) in heritable forms of chondrodysplasia.
- Author
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Sweetman WA, Rash B, Sykes B, Beighton P, Hecht JT, Zabel B, Thomas JT, Boot-Handford R, Grant ME, and Wallis GA
- Subjects
- Base Sequence, DNA genetics, DNA isolation & purification, DNA Restriction Enzymes, Female, Genetic Variation, Humans, Male, Molecular Sequence Data, Oligodeoxyribonucleotides, Pedigree, Polymerase Chain Reaction methods, Polymorphism, Genetic, Restriction Mapping, Collagen genetics, Mutation, Osteochondrodysplasias genetics
- Abstract
Type X collagen is a homotrimeric, short chain, nonfibrillar collagen that is expressed exclusively by hypertrophic chondrocytes at the sites of endochondral ossification. The distribution and pattern of expression of the type X collagen gene (COL10A1) suggests that mutations altering the structure and synthesis of the protein may be responsible for causing heritable forms of chondrodysplasia. We investigated whether mutations within the human COL10A1 gene were responsible for causing the disorders achondroplasia, hypochondroplasia, pseudoachondroplasia, and thanatophoric dysplasia, by analyzing the coding regions of the gene by using PCR and the single-stranded conformational polymorphism technique. By this approach, seven sequence changes were identified within and flanking the coding regions of the gene of the affected persons. We demonstrated that six of these sequence changes were not responsible for causing these forms of chondrodysplasia but were polymorphic in nature. The sequence changes were used to demonstrate discordant segregation between the COL10A1 locus and achondroplasia and pseudoachondroplasia, in nuclear families. This lack of segregation suggests that mutations within or near the COL10A1 locus are not responsible for these disorders. The seventh sequence change resulted in a valine-to-methionine substitution in the carboxyl-terminal domain of the molecule and was identified in only two hypochondroplasic individuals from a single family. Segregation analysis in this family was inconclusive, and the significance of this substitution remains uncertain.
- Published
- 1992
11. Ehlers Danlos syndrome type VIIB. Incomplete cleavage of abnormal type I procollagen by N-proteinase in vitro results in the formation of copolymers of collagen and partially cleaved pNcollagen that are near circular in cross-section.
- Author
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Watson RB, Wallis GA, Holmes DF, Viljoen D, Byers PH, and Kadler KE
- Subjects
- Amino Acid Sequence, Base Sequence, Cells, Cultured, Child, Collagen genetics, DNA genetics, Ehlers-Danlos Syndrome genetics, Humans, Hydrolysis, Microscopy, Electron, Molecular Sequence Data, Mutation, RNA, Messenger genetics, Collagen metabolism, Ehlers-Danlos Syndrome metabolism, Endopeptidases metabolism, Procollagen metabolism
- Abstract
We have shown that a child with Ehlers Danlos syndrome (EDS) type VII has a G to A transition at the first nucleotide of intron 6 in one of her COL1A2 alleles. Half of the cDNA clones prepared from the proband's pro alpha 2(I) mRNA lacked exon 6. The type I procollagen secreted by the proband's dermal fibroblasts in culture was purified, and collagen fibrils were generated in vitro by cleavage of the procollagen with the procollagen N- and C-proteinases. Incubation of the procollagen with N-proteinase resulted in a 1:1 mixture of pCcollagen and uncleaved procollagen. Incubation of this mixture with C-proteinase generated collagen and abnormal pNcollagen (pNcollagen-ex6) that readily copolymerized into fibrils. By electron microscopy these fibrils resembled the hieroglyphic fibrils seen in the N-proteinase-deficient skin of dermatosparactic animals and humans and were distinct from the near circular cross-section fibrils seen in the tissues of individuals with EDS type VII. Further incubation of the hieroglyphic fibrils with N-proteinase resulted in partial cleavage of the pNcollagen-ex6 in which the abnormal pN alpha 2(I) chains remained intact. These fibrils were not hieroglyphic but were near circular in cross-section. Fibrils formed from collagen and pNcollagen-ex6 that had been partially cleaved with elevated amounts of N-proteinase prior to fibril formation were also near circular in cross-section. The results are consistent with a model of collagen fibril formation in which the intact N-propeptides are located exclusively at the surface of the hieroglyphic fibrils. Partial cleavage of the pNcollagen-ex6 by N-proteinase allows the N-propeptides to be incorporated within the body of the fibrils. The model provides an explanation for the morphology and molecular composition of collagen fibrils in the tissues of patients with EDS type VII.
- Published
- 1992
12. Osteogenesis imperfecta due to recurrent point mutations at CpG dinucleotides in the COL1A1 gene of type I collagen.
- Author
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Pruchno CJ, Cohn DH, Wallis GA, Willing MC, Starman BJ, Zhang XM, and Byers PH
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- Adult, Amino Acid Sequence, Base Sequence, Female, Genes, Dominant, Genes, Lethal, Heterozygote, Humans, Infant, Newborn, Male, Molecular Sequence Data, Collagen genetics, DNA genetics, Dinucleoside Phosphates genetics, Mutation, Osteogenesis Imperfecta genetics
- Abstract
Most individuals with osteogenesis imperfecta (OI) are heterozygous for dominant mutations in one of the genes that encode the chains of type I collagen. Each of the more than 30 mutations characterized to date has been unique to the affected member(s) of the family. We have determined that two individuals with a progressive deforming variety of OI, OI type III, have the same new dominant mutation [alpha 1(I)gly154 to arg] and that two unrelated infants with perinatal lethal OI, OI type II, share a second new dominant mutation [alpha 1(I)gly1003 to ser]. These mutations occurred at CpG dinucleotides, in a manner consistent with deamination of a methylated cytosine residue, and raise the possibility that CpG dinucleotides are common sites of recurrent mutations in collagen genes. Further, these findings confirm that the OI type-III phenotype, previously thought to be inherited in an autosomal recessive manner, can result from new dominant mutations in the COL1A1 gene of type-I collagen.
- Published
- 1991
- Full Text
- View/download PDF
13. Substitution of arginine for glycine at position 847 in the triple-helical domain of the alpha 1 (I) chain of type I collagen produces lethal osteogenesis imperfecta. Molecules that contain one or two abnormal chains differ in stability and secretion.
- Author
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Wallis GA, Starman BJ, Schwartz MF, and Byers PH
- Subjects
- Amino Acid Sequence, Arginine, Base Sequence, Cloning, Molecular, Collagen metabolism, Cyanogen Bromide, DNA genetics, Glycine, Hot Temperature, Humans, Molecular Sequence Data, Mutation, Oligonucleotides, Peptide Mapping, Protein Conformation, Protein Denaturation, Collagen genetics, Osteogenesis Imperfecta genetics
- Abstract
Dermal fibroblasts from a fetus with perinatal lethal OI synthesized normal and abnormal type I procollagen molecules. The abnormal molecules contained one or two pro alpha 1 (I) chains in which glycine at position 847 in the triple helical region was substituted by arginine as the result of a de novo G-to-A transition in the first base of the glycine codon. The substitution resulted in increased posttranslational modification amino-terminal of the mutation site of all chains in molecules that contained one or more abnormal chains. Secretion of the overmodified molecules was impaired, and intracellular retention of molecules which contained two abnormal chains was greater than that of molecules which contained one abnormal chain. The thermal stability of molecules that contained two abnormal chains was markedly lower than that of molecules containing one abnormal chain. After cleavage of molecules with vertebrate collagenase, the thermal stability of the overmodified A fragments was greater than that of the normal molecules. Our findings indicate that the cell distinguishes three classes of molecules and suggest that these molecules differ depending on the number of abnormal chains in the trimer.
- Published
- 1990
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