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This paper reports on a detailed study of the influence of salinity on the biological activity of 1-alkyl-3-methylimidazolium chlorides on two green algae Oocystis submarinaand Chlorella vulgaris, one diatom Cyclotella meneghinianaand one blue-green alga Geitlerinema amphibium. All these organisms inhabit the Baltic Sea, an environment naturally varying greatly in salinity. The toxicity effects of ILs towards cyanobacterial and algal organisms were tested in fresh water and in water of four different salinities—8, 16, 24 and 32 PSU—reflecting the whole range encountered in the Baltic Sea. Increasing the salinity was found to exert a significant influence on ionic liquid toxicity in all cases. The lower toxicity is probably due to the reduced permeability of ionic liquid cations through the algal cell walls. Higher chloride concentrations offer a good ion-pairing environment for imidazolium cations, which therefore compete with hydroxyl or silanol functional groups in cell-wall structures. The results of this work indicate that at higher salinities algal growth is inhibited to a significantly lesser extent. With the same IL concentration, the toxicity decreases by eight–ten times in the algae or about three times in the cyanobacterium in the 0–32 PSU salinity range. [ABSTRACT FROM AUTHOR]