Search

The objective of this study was to characterize the effects of organic soil amendment (compost) on bacterial populations associated with petroleum hydrocarbon (PH) degradation and nitrous oxide (N2O) dynamics via pot experiments. Soil was artificially contaminated with diesel oil at total petroleum hydrocarbon (TPH) concentration of 30,000 mg·kg-soil-1 and compost was mixed with the contaminated soil at a 1:9 ratio (w/w). Maize seedlings were planted in each pot and a total of ten pots with two treatments (compost-amended and unamended) were prepared. The pot experiment was conducted for 85 days. The compost-amended soil had a significantly higher TPH removal efficiency (51.1%) than unamended soil (21.4%). Additionally, the relative abundance of the alkB gene, which is associated with PH degradation, was higher in the compost-amended soil than in the unamended soil. Similarly, cnorB and nosZ (which are associated with nitric oxide (NO) and N2O reduction, respectively) were also highly upregulated in the compost-amended soil. Moreover, the compost-amended soil exhibited higher richness and evenness indices, indicating that bacterial diversity was higher in the amended soil than in the unamended soil. Therefore, our findings may contribute to the development of strategies to enhance remediation efficiency and greenhouse gas mitigation during the rhizoremediation of diesel-contaminated soils.

Endoplasmic reticulum (ER) stress is a common stress factor during the aging process. Heat shock factor 1 (HSF1) plays a critical role in ER stress, however, its exact function in age-related hearing loss (ARHL) has not been fully elucidated. The purpose of the present study was to identify the role of HSF1 in ARHL. In this study, we demonstrated that the loss of inner and outer hair cells and their supporting cells was predominant in the high-frequency region (basal turn, 32 kHz) in ARHL cochleae. In the aging cochlea, levels of the ER stress marker proteins p-eIF2α and CHOP increased as HSF1 protein levels decreased. The levels of various heat shock proteins (HSPs) also decreased, including HSP70 and HSP40, which were markedly downregulated, and the expression levels of Bax and cleaved caspase-3 apoptosis-related proteins were increased. However, HSF1 overexpression showed significant hearing protection effects in the high-frequency region (basal turn, 32 kHz) by decreasing CHOP and cleaved caspase-3 and increasing the HSP40 and HSP70 proteins. These findings were confirmed by HSF1 functional studies using an auditory cell model. Therefore, we propose that HSF1 can function as a mediator to prevent ARHL by decreasing ER stress-dependent apoptosis in the aging cochlea.

The effects of operational parameters such as carbon source, C/N ratio, initial nitrate concentration, temperature, and pH value on heterotrophic denitrification and functional denitrifying genes w...

It is known that hyperlipidemia is a risk factor for sensorineural hearing loss. However, the biological mechanisms underlying hyperlipidemia and hearing impairment have not been completely elucidated in the cochlea. Based on our previous study of human subjects, elderly people taking drugs for hyperlipidemia showed better hearing than those not taking any medications. We hypothesized that drugs for hyperlipidemia, such as statins, may have the potential to prevent hearing impairment. The aim of this study was to investigate the correlation between hyperlipidemia and hearing impairment and the hearing preservation effect of atorvastatin using a hyperlipidemic mouse model with diet-induced obesity (DIO). Here, we demonstrate that DIO mice had a significant hearing impairment as well as increased levels of reactive oxygen species (ROS) and hair cell death due to reduced levels of pAKT and superoxide dismutase 2 (SOD2). However, these changes were significantly prevented by atorvastatin. In mechanistic studies, oxidative stress-induced intrinsic apoptosis was decreased by the high expression of nrf2 and antioxidant genes, which improved mitochondrial function and ROS via activation of the PI3K-AKT pathway by atorvastatin. Therefore, atorvastatin has the potential to prevent hearing impairment via redox balance in the presence of hyperlipidemia.

Effects of operational parameters (initial nitrite concentration, initial nitrate concentration, carbon source, and COD/N ratio) on denitrification performance was evaluated using a sequencing batch reactor (SBR) under intermittent aeration. Complete denitrification was observed without N

Meat-grilling restaurants are considered to be residential emission sources of air pollutants. To investigate the emission characteristics of particulate matter (PM), odors, and volatile organic compounds (VOCs) from the grilling of meat, a grilling apparatus equipped with butane gas burners was used to grill pork belly and marinated pork ribs in a laboratory setting. When grilling the pork belly, the emission factor for PM with a diameter of 2.5 μm or below (PM2.5) was 754 mg-PM·kg-meat−1, accounting for 99% of total suspended particles (TSPs), while that of the marinated pork ribs was 137 mg-PM·kg-meat−1 (96% of TSPs). Ammonia and acetaldehyde were the most common odors emitted during grilling at 43–88 mg·kg-meat−1 and 22–30 mg·kg-meat−1, respectively. Aldehydes were the most significant contributor to total odor intensity (36%–67%). Benzene, vinyl acetate, and hexene were the most abundant VOCs for the pork belly, while butane, vinyl acetate, and n-dodecane were the most abundant for the marinated ribs. Among the VOCs emitted from the pork grilling process, hexene, butane, and toluene were the dominant ozone precursors. The information obtained in this study is useful for furthering the understanding of the characteristics of air pollutants emitted from actual meat-grilling restaurants. Additionally, knowledge of the PM, odor, and VOC emission characteristics and their emission factors is useful for establishing management strategies for air pollutants from meat-grilling restaurants.

Two types of solid bacterial agents for the simultaneous removal of methane and odor were designed using humic soil (De-MO-1) and the mixture of humic soil and tobermolite (De-MO-2) as biocarriers. The bacterial consortium, having the removability of methane and dimethyl sulfide (DMS), was immobilized in the biocarriers, and then stored at room temperature for 375 days without additional treatment. Although the lag period, of which the incubation time required for removing methane and DMS, tended to increase over the storage period, the removability of methane and DMS was maintained during 375 days in both bacterial agents. Key bacteria associated with the removal of methane and odors (Streptomyces, Promicromonospora, Paracoccus, Lysobacter, Sphingopyxis and Methylosystis) could keep their abundance during the storage period. The richness and evenness values of the bacterial communities in De-MO-1 and De-MO-2 ranged 4.89 ∼ 6.50 and 0.89 ∼ 0.98, respectively, indicating that high bacterial diversity was maintained during the storage period. The results suggest that De-MO-1 and De-MO-2, designed for the simultaneous removal of methane and odors, had shelf stabilities over one year.

The mechanism by which 12-O-tetradecanoylphorbol-13-acetate (TPA) bypasses cellular senescence was investigated using human diploid fibroblast (HDF) cell replicative senescence as a model. Upon TPA treatment, protein kinase C (PKC) α and PKCβ1 exerted differential effects on the nuclear translocation of cytoplasmic pErk1/2, a protein which maintains senescence. PKCα accompanied pErk1/2 to the nucleus after freeing it from PEA-15pS(104) via PKCβ1 and then was rapidly ubiquitinated and degraded within the nucleus. Mitogen-activated protein kinase docking motif and kinase activity of PKCα were both required for pErk1/2 transport to the nucleus. Repetitive exposure of mouse skin to TPA downregulated PKCα expression and increased epidermal and hair follicle cell proliferation. Thus, PKCα downregulation is accompanied by in vivo cell proliferation, as evidenced in 7, 12-dimethylbenz(a)anthracene (DMBA)-TPA-mediated carcinogenesis. The ability of TPA to reverse senescence was further demonstrated in old HDF cells using RNA-sequencing analyses in which TPA-induced nuclear PKCα degradation freed nuclear pErk1/2 to induce cell proliferation and facilitated the recovery of mitochondrial energy metabolism. Our data indicate that TPA-induced senescence reversal and carcinogenesis promotion share the same molecular pathway. Loss of PKCα expression following TPA treatment reduces pErk1/2-activated SP1 biding to the p21(WAF1) gene promoter, thus preventing senescence onset and overcoming G1/S cell cycle arrest in senescent cells.

This study investigated the effects of proton exchange membranes (PEMs) on performance and microbial community of air-cathode microbial fuel cells (MFCs). Air-cathode MFCs with reactor volume of 1L were constructed in duplicate with or without PEM (designated as ACM-MFC and AC-MFC, respectively) and fed with a mixture of glucose and acetate (1:1, w:w). The maximum power density and coulombic efficiency did not differ between MFCs in the absence or presence of a PEM. However, PEM use adversely affected maximum voltage production and the rate of organic compound removal (p0.05). Quantitative droplet digital PCR indicated that AC-MFCs had a greater bacterial population than ACM-MFCs (p0.05). Likewise, ribosomal tag pyrosequencing revealed that the diversity index of bacterial communities was greater for AC-MFCs (p0.05). Network analysis revealed that the most abundant genus was Enterococcus, which comprised ≥62% of the community and was positively associated with PEM and negatively associated with the rate of chemical oxygen demand (COD) removal (Pearson correlation0.9 and p0.05). Geobacter, which is known as an exoelectrogen, was positively associated with maximum power density and negatively associated with PEM. Thus, these results suggest that the absence of PEM favored the growth of Geobacter, a key player for electricity generation in MFC systems. Taken together, these findings demonstrate that MFC systems without PEM are more efficient with respect to power production and COD removal as well as exoelectrogen growth.

Landfills are key anthropogenic emission sources for odors and methane. For simultaneous mitigation of odors and methane emitted from landfills, a pilot-scale biocover (soil:perlite:earthworm cast:compost, 6:2:1:1, v/v) was constructed at a sanitary landfill in South Korea, and the biocover performance and its bacterial community dynamics were monitored for 240 days. The removal efficiencies of odor and methane were evaluated to compare the odor dilution ratios or methane concentrations at the biocover surface and landfill soil cover surface where the biocover was not installed. The odor removal efficiency was maintained above 85% in all seasons. The odor dilution ratios ranged from 300 to 3000 at the biocover surface, but they were 6694-20,801 at the landfill soil cover surface. Additionally, the methane removal efficiency was influenced by the ambient temperature; the methane removal efficiency in winter was 35-43%, while the methane removability was enhanced to 85%, 86%, and 96% in spring, early summer, and late summer, respectively. The ratio of methanotrophs to total bacterial community increased with increasing ambient temperature from 5.4% (in winter) to 12.8-14.8% (in summer). In winter, non-methanotrophs, such as Acinetobacter (8.8%), Rhodanobacter (7.5%), Pedobacter (7.5%), and Arthrobacter (5.7%), were abundant. However, in late summer, Methylobacter (8.8%), Methylocaldum (3.4%), Mycobacterium (1.1%), and Desulviicoccus (0.9%) were the dominant bacteria. Methylobacter was the dominant methanotroph in all seasons. These seasonal characteristics of the on-site biocover performance and its bacterial community are useful for designing a full-scale biocover for the simultaneous mitigation of odors and methane at landfills.

Methane oxidation and the production potentials of ground soil (soil A) and garden soil (soil B, C, & D) in an urban school were evaluated, and the methanotrophic and methanogen communities in the soil samples were quantified using quantitative realtime PCR. The methanotrophic community in the raw soil A sample possessed a gene copy number/g dry weight soil, whereas those in the raw soils B~D samples were gene copy numbers/g dry weight soil. Serum bottles added with the soil samples were enriched with methane gas, and then evaluated for their methane oxidation potential. The soil A sample had a longer induction phase for methane oxidation than the other soils. However, soil A showed a similar methane oxidation potential with soils B~D after the induction phase. The methanotrophic community in the enriched soil A sample was increased by up to gene copy numbers/g dry weight soil, which had no significantly difference compared with those in soils B~D ( gene copy numbers/g dry weight soil). Methane production showed a similar tendency to methane oxidation. The methanogens community in raw soil A ( gene copy number/g dry weight soil) was much less than those in raw soils B~D ( gene copy numbers/g dry weight soil). However, after methane gas was produced by adding starch to the soils, soil samples A~D showed gene copy numbers/g dry weight soil in methanogens communities. The results indicate that methanotrophic and methanogenic bacteria have coexisted in this urban school's soils. Moreover, under appropriate conditions for methane oxidation and production, methanotrophic bacteria and methanogens are increased and they have the potential for methane oxidation and production.

An integrated process involving conventional anaerobic digestion and microbial fuel cells (MFCs) has attracted attention recently to produce sustainable energy and to treat wastewater efficiently. To evaluate the possibility of CH4-producing process (BioCH4)-MFC or H2-producing process (BioH2)-MFC integrating systems, the MFC performances were investigated using rejected wastewater from a BioCH4 reactor (RWCH4) or BioH2 reactor (RWH2) treating molasses wastewater. When RWCH4 or RWH2 was fed into a single-chamber MFC reactor (designated as AC-MFCCH4 and AC-MFCH2, respectively) at different hydraulic retention times (HRT) of 1-7 d, both MFC systems showed maximum electricity production efficiencies at a HRT of 3 d. In the AC-MFCCH4 reactor, the average current density and average power density were 60.5 mA·m(-2) and 8.8 mW·m(-2), respectively. The AC-MFCH2 reactor generated an average current density of 71.4 mA·m(-2) and an average power density of 12.0 mW·m(-2). The COD removal rates were 45.7% in the AC-MFCCH4 reactor and 90.3% in the AC-MFCH2 reactor. There were no significant differences of the eubacterial community structures between the MFC systems, where Proteobacteria was remarkably dominant in both MFC systems. However, the archaeal community structures were significantly different where Methanothrix (89.3%) was remarkably dominant in the AC-MFCCH4 system, while Methanothrix (52.5%) and Methanosarcina (33.5%) were abundant in the AC-MFCH2 system. These findings demonstrate that the utilization of MFCs after the BioCH4 or BioH2 process is advantageous for energy recovery as well as COD removal from molasses wastewater.

The efficient AgOTf-catalyzed isomerization reactions of various alkynyl oxiranes and alkynyl allyl alcohols were carried out at room temperature with moderate to good yields. This is an economical and mild method for the construction of O-heterocyclic compounds.

A novel dissimilatory iron-reducing bacteria, Klebsiella sp. IR21, was isolated from the anode biofilm of an MFC reactor. Klebsiella sp. IR21 reduced 27.8 % of ferric iron to ferrous iron demonstrating that Klebsiella sp. IR21 has electron transfer ability. Additionally, Klebsiella sp. IR21 generated electricity forming a biofilm on the anode surface. When a pure culture of Klebsiella sp. IR21 was supplied into a single chamber, air-cathode MFC fed with a mixture of glucose and acetate (500 mg L(-1) COD), 40-60 mV of voltage (17-26 mA m(-2) of current density) was produced. Klebsiella sp. IR21 was also utilized as a biocatalyst to improve the electrical performance of a conventional MFC reactor. A single chamber, air-cathode MFC was fed with reject wastewater (10,000 mg L(-1) COD) from a H2 fermentation reactor. The average voltage, current density, and power density were 142.9 ± 25.74 mV, 60.5 ± 11.61 mA m(-2), and 8.9 ± 3.65 mW m(-2), respectively, in the MFC without inoculation of Klebsiella sp. IR21. However, these electrical performances of the MFC were significantly increased to 204.7 ± 40.24 mV, 87.5 ± 17.20 mA m(-2), and 18.6 ± 7.23 mW m(-2), respectively, with inoculation of Klebsiella sp. IR21. The results indicate that Klebsiella sp. IR21 can be utilized as a biocatalyst for enhancement of electrical performance in MFC systems.

A novel iron-reducing yeast, Candida sp. IR11, was isolated from an anodic biofilm in a MFC reactor fed glucose as a feedstock. 200–250 mV of voltage was produced in the air–cathode MFC inoculated with a pure culture of the strain IR11 where glucose was supplied as a feedstock. When the strain IR11 was inoculated into a conventional MFC treating rejected wastewater from an upflow anaerobic sludge blanket, maximum power density and coulombic efficiency were enhanced from 15.2 ± 0.36 to 20.6 ± 1.52 mW m −2 and from 14.4 ± 0.45% to 21.9 ± 0.71%, respectively. In addition, the inoculation with IR11 improved COD removal from 79.1 ± 1.53% to 91.3 ± 5.29%. The quantitative PCR results showed that the strain IR11 successfully attached the anodic biofilm of the MFC reactors. These results indicate that Candida sp. IR11 is a promising biocatalyst for the enhancement of MFC performance.

The central role of cyclin-dependent kinases (CDKs) in cell cycle regulation makes them a promising target for studying inhibitory molecules that can modify the degree of cell proliferation. The discovery of specific inhibitors of CDKs such as polyhydroxylated flavones has opened the way to investigation and design of antimitotic compounds. Among the polyhydroxylated flavones, flavopiridol (1, Figure 1) has completed phase I clinical trial where it showed antitumor effect in patients with refractory neoplasms. This encouraging result, which is consistent with the ability of 1 to inhibit proliferation of cancer cells in vitro makes polyhydroxylated flavone an interesting target for further analogue synthesis. In continuation of our studies aimed toward the development of more potent and more selective anticancer agents, we designed flavone derivatives for further biological evaluation. The flavone naringenin is widely spread in nature and easily extracted from a lot of different plants. Their protective effect against lipid peroxidation of membranes, involved in several physiological and pathological disorders, as aging, inflammation, atherosclerosis, ischemia, toxicity of oxygen and chemical substances has been largely reported. Thus, interesting biological activity as well as structural similarity with flavopiridol makes naringenin one of the most interesting candidates for designing novel CDK2 inhibitors. However, derivatives of naringenin have not been studied extensively presumably due to the synthetic difficulties. Particularly, naringenin is awkward to make derivatives due to its low solubility in water as well as in organic solvents. In view of designing naringenin derivatives, the 7-O position of naringenin (2, Figure 1) is particularly attractive because it is well known that electrophiles react with hydroxyl group preferentially at the 7-position. Also, comparison of the biological activity of 7-O-substitued naringenin with that of flavopiridol would provide interesting insights into designing novel flavonoid CDK2 inhibitors due to their subtle distinction in three dimensional structures. On the other hand, as a limiting factor of the use of flavonoids is their low water solubility, another aim of this study was to increase the solubility and dissolution rate of naringenin by conjugate formation with polar substituents. Thus, we set out to prepare various naringenin-amino acid conjugates (2, Figure 1) because amino acids substituted at the 7-O position would serve as an excellent model for our purpose: formation of the amino acid conjugate would benefit naringenin from the various substituent effect as well as increased solubility. Herein we report our efforts to synthesize the title compounds. Recently, two classes of naringenin derivatives, naringenin 7-O-oleic ester and naringenin 7-O-cetyl ether, were prepared for biological evaluation of their anti-atherogenic activity by using the mixed anhydride strategy. However, in our case, due to the epimerization problem at the amino acid αcarbon under the reaction conditions, we decided to use rather mild coupling conditions which was successfully exploited for the preparation of the amino acid esters of 5,7dihydroxy-3-phenoxychromones (3, Figure 2). Thus, a mixture of naringenin (4), N-Boc-L-alanine, and DMAP in anhydrous THF or DMF was treated with EDCI (Scheme 1) and the reaction was monitored by TLC. However, the reaction did not proceed at all presumably due to the solubility problem of the naringenin. After extensive survey of the appropriate solvent system for the coupling reaction, methylene chloride (CH2Cl2) was found to be the solvent of choice: initial slurry of naringenin and NBoc-L-alanine in anhydrous CH2Cl2 became a clear solution as the reaction proceeds, and the reaction was complete in 2

Various alkynyl oxiranes as well as alcohols (IV) and (VI) are suitable precursors of the desired oxazine skeleton.