603 results on '"T, Sasaki"'
Search Results
2. Toward Development of Strong and Formable Magnesium Alloy Sheets with Bake-Hardenability
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Kazuhiro Hono, Mingzhe Bian, Z. H. Li, and T. T. Sasaki
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Materials science ,Magnesium ,Metallurgy ,Alloy ,0211 other engineering and technologies ,General Engineering ,chemistry.chemical_element ,02 engineering and technology ,engineering.material ,021001 nanoscience & nanotechnology ,Precipitation hardening ,chemistry ,Aluminium ,engineering ,Formability ,General Materials Science ,Magnesium alloy ,0210 nano-technology ,021102 mining & metallurgy ,Hardenability - Abstract
To enable broader applications of magnesium alloy sheets, one requirement is to achieve comparable strength-formability balance with that of aluminum-based alloys. Based on the review of recent studies on precipitation hardening of microalloyed magnesium alloys, we propose the usage of age-hardenable alloys to overcome the strength-formability trade-off in magnesium alloy sheets. Precipitation hardening has not been actively used in commercial wrought magnesium alloys because of their poor age-hardening responses. However, recent studies have shown appropriate selection of microalloying elements leads to a substantial enhancement of the kinetics of age-hardening. We found Mg-Ca-X (X = Al, Zn) dilute alloys show promising age-hardening characteristics for bake-hardenable alloy sheets that may be used as a substitute for 6xxx aluminum alloy sheet for weight reduction. Such alloys show excellent room temperature stretch formability, and substantial strengthening to ~240 MPa can be achieved by a short-term aging at low temperatures: 170°C for 20 min.
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- 2021
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3. The temporal effects of topical NF-κB inhibition, in the in vivo prevention of bile-related oncogenic mRNA and miRNA phenotypes in murine hypopharyngeal mucosa: a preclinical model
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Panagiotis G Doukas, David A. Kasle, Dimitra P. Vageli, Sotirios G. Doukas, and Clarence T. Sasaki
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0301 basic medicine ,Prostaglandin ,bile ,Bile reflux ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,In vivo ,BAY 11-7082 ,microRNA ,medicine ,NF-κB inhibition ,STAT3 ,biology ,laryngopharyngeal reflux ,medicine.disease ,In vitro ,WNT5A ,030104 developmental biology ,Oncology ,chemistry ,030220 oncology & carcinogenesis ,biology.protein ,Cancer research ,Tumor necrosis factor alpha ,hypopharyngeal cancer ,Research Paper - Abstract
Supraesophageal bile reflux at strongly acidic pH can cause hypopharyngeal squamous cell cancer, through activation of the oncogenic NF-κB-related pathway. We hypothesize that topical pre- or post-application of pharmacologic NF-κB inhibitor, BAY 11-7082 (0.25 μmol), on murine (C57BL/6J) HM (twice a day for 10 days) can effectively inhibit acidic bile (10 mmol/l; pH 3.0) induced oncogenic molecular events, similar to prior in vitro findings. We demonstrate that the administration of BAY 11-7082, either before or after acidic bile, eliminates NF-κB activation, prevents overexpression of Bcl2, Rela, Stat3, Egfr, Tnf, Wnt5a, and deregulations of miR-192, miR-504, linked to bile reflux-related hypopharyngeal cancer. Pre- but not post-application of NF-κB inhibitor, significantly blocks overexpression of Il6 and prostaglandin H synthases 2 (Ptgs2), and reverses miR-21, miR-155, miR-99a phenotypes, supporting its early bile-induced pro-inflammatory effect. We thus provide novel evidence that topical administration of a pharmacological NF-κB inhibitor, either before or after acidic bile exposure can successfully prevent its oncogenic mRNA and miRNA phenotypes in HM, supporting the observation that co-administration of NF-κB inhibitor may not be essential in preventing early bile-related oncogenic events and encouraging a capacity for further translational exploration.
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- 2020
4. The in vivo preventive and therapeutic properties of curcumin in bile reflux‐related oncogenesis of the hypopharynx
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Clarence T. Sasaki, Dimitra P. Vageli, Panagiotis G Doukas, and Sotirios G. Doukas
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Male ,0301 basic medicine ,Bcl2 ,Curcumin ,Carcinogenesis ,bile ,Pharmacology ,medicine.disease_cause ,Bile reflux ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,In vivo ,medicine ,Animals ,RNA, Messenger ,STAT3 ,Carcinogen ,Cell Proliferation ,Mucous Membrane ,Stat3 ,biology ,laryngopharyngeal reflux ,Egfr ,Bile Reflux ,NF‐κB ,NF-kappa B ,Hypopharyngeal cancer ,Original Articles ,Cell Biology ,medicine.disease ,In vitro ,Mice, Inbred C57BL ,Hypopharynx ,Ki-67 Antigen ,Phenotype ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,biology.protein ,Molecular Medicine ,Female ,Original Article ,hypopharyngeal cancer - Abstract
Bile at strongly acidic pH exerts a carcinogenic effect on the hypopharynx, based upon recent pre‐clinical studies that support its role as an independent risk factor. We recently demonstrated in vitro that curcumin can prevent oncogenic profile of bile in human hypopharyngeal cells, by inhibiting NF‐κB. We hypothesize that topically applied curcumin to the hypopharynx can similarly block early oncogenic molecular events of bile, by inhibiting NF‐κB and consequently altering the expression of genes with oncogenic function. Using Mus musculus (C57Bl/6J), we topically applied curcumin (250 μmol/L; three times per day; 10 days) to the hypopharynx, 15 minutes before, 15 minutes after or in combination with bile acids (pH 3.0). Immunohistochemical analysis and qPCR revealed that topically applied curcumin either before, after or in combination with acidic bile exposure significantly suppressed its induced NF‐κB activation in regenerating epithelial cells, and overexpression of Rela, Bcl2, Egfr, Stat3, Wnt5a, Tnf, Il6, Ptgs2. Akt1 was particularly inhibited by curcumin when applied simultaneously with bile. We provide novel evidence into the preventive and therapeutic properties of topically applied curcumin in acidic bile‐induced early oncogenic molecular events in hypopharyngeal mucosa, by inhibiting NF‐κB, and shaping future translational development of effective targeted therapies using topical non‐pharmacologic inhibitors of NF‐κB.
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- 2020
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5. SI-MOIRAI: a new method to identify and quantify the metabolic fate of nucleotides
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Eric P. Smith, Robert Bachoo, Atsuo T. Sasaki, Satoshi Kofuji, Akiyoshi Hirayama, Ryo Kamata, Yoshihisa Hirota, Natsuki Osaka, Tomoyoshi Soga, Yuki Fujii, Yoshiki Ikeda, Mika Sasaki, and Satsuki Ikeda
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Purine ,chemistry.chemical_classification ,RNA ,General Medicine ,Ribosomal RNA ,Biochemistry ,chemistry.chemical_compound ,chemistry ,Transfer RNA ,Pyrimidine metabolism ,Regular Paper ,Nucleotide ,Molecular Biology ,Flux (metabolism) ,DNA - Abstract
Since the discovery of nucleotides over 100 years ago, extensive studies have revealed the importance of nucleotides for homeostasis, health and disease. However, there remains no established method to investigate quantitatively and accurately intact nucleotide incorporation into RNA and DNA. Herein, we report a new method, Stable-Isotope Measure Of Influxed Ribonucleic Acid Index (SI-MOIRAI), for the identification and quantification of the metabolic fate of ribonucleotides and their precursors. SI-MOIRAI, named after Greek goddesses of fate, combines a stable isotope-labelling flux assay with mass spectrometry to enable quantification of the newly synthesized ribonucleotides into r/m/tRNA under a metabolic stationary state. Using glioblastoma (GBM) U87MG cells and a patient-derived xenograft (PDX) GBM mouse model, SI-MOIRAI analyses showed that newly synthesized GTP was particularly and disproportionally highly utilized for rRNA and tRNA synthesis but not for mRNA synthesis in GBM in vitro and in vivo. Furthermore, newly synthesized pyrimidine nucleotides exhibited a significantly lower utilization rate for RNA synthesis than newly synthesized purine nucleotides. The results reveal the existence of discrete pathways and compartmentalization of purine and pyrimidine metabolism designated for RNA synthesis, demonstrating the capacity of SI-MOIRAI to reveal previously unknown aspects of nucleotide biology.
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- 2021
6. Structure–Activity Relationship Study of Covalent Pan-phosphatidylinositol 5-Phosphate 4-Kinase Inhibitors
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Fleur M. Ferguson, Hyeseok Shim, Adam Yasgar, Min Shen, Matthew D. Hall, Sirano Dhe-Paganon, Nathanael S. Gray, Scott B. Ficarro, Jarrod A. Marto, Sindhu Carmen Sivakumaren, Joseph D. Card, Matthew B. Boxer, Theresa D. Manz, Anton Simeonov, Atsuo T. Sasaki, Hyuk-Soo Seo, Mindy I. Davis, Tinghu Zhang, and Lewis C. Cantley
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010405 organic chemistry ,Kinase ,Chemistry ,Drug discovery ,Organic Chemistry ,Context (language use) ,01 natural sciences ,Biochemistry ,Small molecule ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,chemistry.chemical_compound ,Covalent bond ,Drug Discovery ,Structure–activity relationship ,Phosphatidylinositol ,Phosphatidylinositol 5-phosphate - Abstract
[Image: see text] Phosphatidylinositol 5-phosphate 4-kinases (PI5P4Ks) are important molecular players in a variety of diseases, such as cancer. Currently available PI5P4K inhibitors are reversible small molecules, which may lack selectivity and sufficient cellular on-target activity. In this study, we present a new class of covalent pan-PI5P4K inhibitors with potent biochemical and cellular activity. Our designs are based on THZ-P1-2, a covalent PI5P4K inhibitor previously developed in our lab. Here, we report further structure-guided optimization and structure–activity relationship (SAR) study of this scaffold, resulting in compound 30, which retained biochemical and cellular potency, while demonstrating a significantly improved selectivity profile. Furthermore, we confirm that the inhibitors show efficient binding affinity in the context of HEK 293T cells using isothermal CETSA methods. Taken together, compound 30 represents a highly selective pan-PI5P4K covalent lead molecule.
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- 2019
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7. Dynamic compartmentalization of purine nucleotide metabolic enzymes at leading edge in highly motile renal cell carcinoma
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Atsuo T. Sasaki, Kara Wolfe, Satoshi Kofuji, Hirofumi Yoshino, Mika Sasaki, and Koichi Okumura
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0301 basic medicine ,Guanylate kinase ,Biophysics ,Mitochondrion ,Biochemistry ,Isozyme ,Article ,03 medical and health sciences ,IMP Dehydrogenase ,0302 clinical medicine ,Cell Line, Tumor ,GMP synthase ,Humans ,Carbon-Nitrogen Ligases ,Nucleotide ,Purine metabolism ,Carcinoma, Renal Cell ,Purine Nucleotides ,Molecular Biology ,chemistry.chemical_classification ,Cell Biology ,NM23 Nucleoside Diphosphate Kinases ,Kidney Neoplasms ,Cell biology ,030104 developmental biology ,chemistry ,Cytoplasm ,030220 oncology & carcinogenesis ,Guanylate Kinases ,Intracellular - Abstract
Compartmentalization is vital for biological systems at multiple levels, including biochemical reactions in metabolism. Organelle-based compartments such as mitochondria and peroxisomes sequester the responsible enzymes and increase the efficiency of metabolism while simultaneously protecting the cell from dangerous intermediates, such as radical oxygen species. Recent studies show intracellular nucleotides, such as ATP and GTP, are heterogeneously distributed in cells with high concentrations at the lamellipodial and filopodial projections, or leading edge. However, the intracellular distribution of purine nucleotide enzymes remains unclear. Here, we report the enhanced localization of GTP-biosynthetic enzymes, including inosine monophosphate dehydrogenase (IMPDH isotype 1 and 2), GMP synthase (GMPS), guanylate kinase (GUK1) and nucleoside diphosphate kinase-A (NDPK-A) at the leading edge in renal cell carcinoma cells. They show significant co-localization at the membrane subdomain, and their co-localization pattern at the membrane is distinct from that of the cell body. While other purine nucleotide biosynthetic enzymes also show significant localization at the leading edge, their co-localization pattern with IMPDH is divergent. In contrast, a key glycolytic enzyme, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), predominantly localized in the cytoplasm. Mechanistically, we found that plasma membrane localization of IMPDH isozymes requires active actin polymerization. Our results demonstrate the formation of a discrete metabolic compartment for localized purine biosynthesis at the leading edge, which may promote localized nucleotide metabolism for cell migration and metastasis in cancers.
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- 2019
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8. Biliary tumorigenic effect on hypopharyngeal cells is significantly enhanced by pH reduction
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Jacob I. Tower, Sotirios G. Doukas, Clarence T. Sasaki, Bruno Cardoso, and Dimitra P. Vageli
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0301 basic medicine ,Cancer Research ,medicine.disease_cause ,chemistry.chemical_compound ,0302 clinical medicine ,STAT3 ,Cells, Cultured ,Original Research ,Cancer Biology ,biology ,Bile acid ,Chemistry ,laryngopharyngeal reflux ,pH ,Deoxycholic acid ,NF-kappa B ,Hypopharyngeal cancer ,Hydrogen-Ion Concentration ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Gene Expression Regulation, Neoplastic ,Cell Transformation, Neoplastic ,Oncology ,Proto-Oncogene Proteins c-bcl-2 ,030220 oncology & carcinogenesis ,Gastroesophageal Reflux ,acid ,Signal Transduction ,STAT3 Transcription Factor ,medicine.drug_class ,Primary Cell Culture ,PH reduction ,Models, Biological ,lcsh:RC254-282 ,Bile Acids and Salts ,03 medical and health sciences ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Cell Proliferation ,bile acids ,Messenger RNA ,NF‐κB ,NF-κB ,medicine.disease ,Hypopharynx ,030104 developmental biology ,Cancer research ,biology.protein ,Carcinogenesis ,hypopharyngeal cancer - Abstract
Biliary reflux has been considered a potential risk factor in upper aerodigestive tract malignancies. It is not yet clearly known how pH affects the bile‐induced activation of NF‐κB and its related oncogenic pathway previously linked to hypopharyngeal carcinogenesis. In this study, repetitive applications of conjugated primary bile acids with unconjugated secondary bile acid, deoxycholic acid (DCA), on human hypopharyngeal primary cells reveal that strongly acidic pH (4.0) optimally enhances the tumorigenic effect of bile, by inducing activation of NF‐κB, STAT3 nuclear translocation, bcl‐2 overexpression and significant overexpression of the oncogenic mRNA phenotype, compared to weakly acidic pH (5.5) or neutral pH (7.0). As the pH becomes less acidic the partially activated primary bile acids and activated DCA begin to exert their influence; however, with significantly less intensity compared to bile acids at strongly acidic pH. Our findings suggest that biliary tumorigenic effect is strongly pH dependent. Controlling pH during reflux events may be therapeutically effective in reducing the potential risk of bile‐induced hypopharyngeal cancer.
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- 2019
9. IMP dehydrogenase-2 drives aberrant nucleolar activity and promotes tumorigenesis in glioblastoma
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Ingrid Grummt, Sergey Mareninov, Holger Bierhoff, Paul S. Mischel, Hiroko Shimada, Lionel M.L. Chow, Nazanin Majd, Makoto Suematsu, Greg Lucey, Alexander Otto Eberhardt, Maya Asano, Yuki Ban, Kaori Kofuji, Eric P. Smith, Eric C. Holland, Noriaki Minami, Ralph J. DeBerardinis, Daisuke Yamashita, Ichiro Nakano, Kazutaka Sumita, Yoshiki Ikeda, Hirofumi Yoshino, Yuki Sugiura, Robert Bachoo, Lisa Lange, Akshiv Malhotra, Mika Sasaki, Risa Kawaguchi, Yonehiro Kanemura, Akiyoshi Hirayama, Annmarie Ramkissoon, William H. Yong, Masaru Mori, Trisha Wise-Draper, Tomoyoshi Soga, Dimitrios Anastasiou, Jumpei Terakawa, Juri Kiyokawa, Tatsuya Ozawa, Hiroaki Wakimoto, Kara Wolfe, Atsuo T. Sasaki, Nobuyuki Onishi, Satoshi Kofuji, Satsuki Ikeda, Craig Horbinski, Takiko Daikoku, Koichi Okumura, Mikako Warren, Shin Morioka, Hideyuki Saya, Naoya Sakamoto, Shuji Kitahara, Oltea Sampetrean, Wataru Yasui, Tomoyuki Mashimo, and Victoria L. Flanary
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Carcinogenesis ,Nucleolus ,IMP Dehydrogenase 2 ,Biology ,medicine.disease_cause ,Article ,03 medical and health sciences ,IMP Dehydrogenase ,0302 clinical medicine ,Downregulation and upregulation ,Transcription (biology) ,Cell Line, Tumor ,medicine ,Humans ,education ,Cell Proliferation ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,education.field_of_study ,Cell growth ,Cell Biology ,Cell biology ,Cell Transformation, Neoplastic ,Enzyme ,chemistry ,RNA, Ribosomal ,030220 oncology & carcinogenesis ,Transfer RNA ,Glioblastoma ,Cell Nucleolus - Abstract
In many cancers, high proliferation rates correlate with elevation of rRNA and tRNA levels, and nucleolar hypertrophy. However, the underlying mechanisms linking increased nucleolar transcription and tumorigenesis are only minimally understood. Here we show that IMP dehydrogenase-2 (IMPDH2), the rate-limiting enzyme for de novo guanine nucleotide biosynthesis, is overexpressed in the highly lethal brain cancer glioblastoma. This leads to increased rRNA and tRNA synthesis, stabilization of the nucleolar GTP-binding protein nucleostemin, and enlarged, malformed nucleoli. Pharmacological or genetic inactivation of IMPDH2 in glioblastoma reverses these effects and inhibits cell proliferation, whereas untransformed glia cells are unaffected by similar IMPDH2 perturbations. Impairment of IMPDH2 activity triggers nucleolar stress and growth arrest of glioblastoma cells even in the absence of functional p53. Our results reveal that upregulation of IMPDH2 is a prerequisite for the occurance of aberrant nucleolar function and increased anabolic processes in glioblastoma, which constitutes a primary event in gliomagenesis.
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- 2019
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10. TGF-β-dependent reprogramming of amino acid metabolism induces epithelial–mesenchymal transition in non-small cell lung cancers
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Yasuhiko Nishioka, Seiji Yano, Tomoyoshi Soga, Yasuhiro Yamada, Maki Ohishi, Sho Tabata, Atsuo T. Sasaki, Hisatsugu Goto, Tadaaki Yamada, Fumie Nakasuka, Ayano Ueno, Akiyoshi Hirayama, Ko Umetsu, Takeharu Sakamoto, Masaru Tomita, Hiromichi Ebi, and Masahiro Sugimoto
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Cancer microenvironment ,0301 basic medicine ,Epithelial-Mesenchymal Transition ,Lung Neoplasms ,QH301-705.5 ,Procollagen-Proline Dioxygenase ,Medicine (miscellaneous) ,Article ,General Biochemistry, Genetics and Molecular Biology ,Metastasis ,Transcriptome ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Downregulation and upregulation ,Transforming Growth Factor beta ,Carcinoma, Non-Small-Cell Lung ,Cell Line, Tumor ,medicine ,Extracellular ,Animals ,Humans ,Metabolomics ,Epithelial–mesenchymal transition ,Biology (General) ,Amino Acids ,chemistry.chemical_classification ,Chemistry ,Gene Expression Profiling ,medicine.disease ,Cancer metabolism ,Cell biology ,Amino acid ,030104 developmental biology ,030220 oncology & carcinogenesis ,embryonic structures ,Female ,General Agricultural and Biological Sciences ,Non-small-cell lung cancer ,Reprogramming ,Intracellular - Abstract
Epithelial–mesenchymal transition (EMT)—a fundamental process in embryogenesis and wound healing—promotes tumor metastasis and resistance to chemotherapy. While studies have identified signaling components and transcriptional factors responsible in the TGF-β-dependent EMT, whether and how intracellular metabolism is integrated with EMT remains to be fully elucidated. Here, we showed that TGF-β induces reprogramming of intracellular amino acid metabolism, which is necessary to promote EMT in non-small cell lung cancer cells. Combined metabolome and transcriptome analysis identified prolyl 4-hydroxylase α3 (P4HA3), an enzyme implicated in cancer metabolism, to be upregulated during TGF-β stimulation. Further, knockdown of P4HA3 diminished TGF-β-dependent changes in amino acids, EMT, and tumor metastasis. Conversely, manipulation of extracellular amino acids induced EMT-like responses without TGF-β stimulation. These results suggest a previously unappreciated requirement for the reprogramming of amino acid metabolism via P4HA3 for TGF-β-dependent EMT and implicate a P4HA3 inhibitor as a potential therapeutic agent for cancer., Through metabolome and transcriptome analyses, Nakasuka et al find that TGF-β-induced epithelial–mesenchymal transition (EMT) in non-small cell lung cancer cells is associated with reprogramming of amino acid metabolism. They also identify P4HA3 as a key enzyme involved in these changes altogether providing insights into potential mechanisms of metastasis.
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- 2021
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11. Divergent Mechanisms Activating RAS and Small GTPases Through Post-translational Modification
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Natsuki Osaka, Yoshihisa Hirota, Doshun Ito, Yoshiki Ikeda, Ryo Kamata, Yuki Fujii, Venkat R. Chirasani, Sharon L. Campbell, Koh Takeuchi, Toshiya Senda, and Atsuo T. Sasaki
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0301 basic medicine ,GTP' ,G-domain ,Guanine ,QH301-705.5 ,cysteine oxydation ,GTPase ,Review ,lysine modification ,RAS superfamily GTPase ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,cancer ,Small GTPase ,Molecular Biosciences ,ubiquitylation (ubiquitination) ,Biology (General) ,Molecular Biology ,Guanine binding ,Effector ,Cell biology ,030104 developmental biology ,chemistry ,post-translational modification ,030220 oncology & carcinogenesis ,Guanine nucleotide exchange factor ,Ras superfamily ,RAS - Abstract
RAS is a founding member of the RAS superfamily of GTPases. These small 21 kDa proteins function as molecular switches to initialize signaling cascades involved in various cellular processes, including gene expression, cell growth, and differentiation. RAS is activated by GTP loading and deactivated upon GTP hydrolysis to GDP. Guanine nucleotide exchange factors (GEFs) and GTPase-activating proteins (GAPs) accelerate GTP loading and hydrolysis, respectively. These accessory proteins play a fundamental role in regulating activities of RAS superfamily small GTPase via a conserved guanine binding (G)-domain, which consists of five G motifs. The Switch regions lie within or proximal to the G2 and G3 motifs, and undergo dynamic conformational changes between the GDP-bound “OFF” state and GTP-bound “ON” state. They play an important role in the recognition of regulatory factors (GEFs and GAPs) and effectors. The G4 and G5 motifs are the focus of the present work and lie outside Switch regions. These motifs are responsible for the recognition of the guanine moiety in GTP and GDP, and contain residues that undergo post-translational modifications that underlie new mechanisms of RAS regulation. Post-translational modification within the G4 and G5 motifs activates RAS by populating the GTP-bound “ON” state, either through enhancement of intrinsic guanine nucleotide exchange or impairing GAP-mediated down-regulation. Here, we provide a comprehensive review of post-translational modifications in the RAS G4 and G5 motifs, and describe the role of these modifications in RAS activation as well as potential applications for cancer therapy.
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- 2021
12. Pepsin Promotes Activation of Epidermal Growth Factor Receptor and Downstream Oncogenic Pathways, at Slightly Acidic and Neutral pH, in Exposed Hypopharyngeal Cells
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Dimitra P. Vageli, Benjamin L. Judson, Panagiotis G Doukas, and Clarence T. Sasaki
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0301 basic medicine ,NF-κB ,STAT3 ,0302 clinical medicine ,Pepsin ,Epidermal growth factor receptor ,Biology (General) ,Spectroscopy ,Cells, Cultured ,biology ,pH ,Chemistry ,laryngopharyngeal reflux ,NF-kappa B ,General Medicine ,Hydrogen-Ion Concentration ,Computer Science Applications ,ErbB Receptors ,Cell Transformation, Neoplastic ,Proto-Oncogene Proteins c-bcl-2 ,030220 oncology & carcinogenesis ,hypopharyngeal primary cells ,Signal Transduction ,STAT3 Transcription Factor ,QH301-705.5 ,Cell Survival ,EGFR ,Article ,Catalysis ,Inorganic Chemistry ,03 medical and health sciences ,Downregulation and upregulation ,Extracellular ,Humans ,Viability assay ,Physical and Theoretical Chemistry ,Molecular Biology ,QD1-999 ,PI3K/AKT/mTOR pathway ,pepsin ,Organic Chemistry ,non-acidic reflux ,Molecular biology ,In vitro ,Pepsin A ,Hypopharynx ,030104 developmental biology ,biology.protein ,head and neck cancer ,hypopharyngeal cancer - Abstract
Pepsin refluxate is considered a risk factor for laryngopharyngeal carcinogenesis. Non-acidic pepsin was previously linked to an inflammatory and tumorigenic effect on laryngopharyngeal cells in vitro. Yet there is no clear evidence of the pepsin-effect on a specific oncogenic pathway and the importance of pH in this process. We hypothesized that less acidic pepsin triggers the activation of a specific oncogenic factor and related-signalling pathway. To explore the pepsin-effect in vitro, we performed intermittent exposure of 15 min, once per day, for a 5-day period, of human hypopharyngeal primary cells (HCs) to pepsin (1 mg/mL), at a weakly acidic pH of 5.0, a slightly acidic pH of 6.0, and a neutral pH of 7.0. We have documented that the extracellular environment at pH 6.0, and particularly pH 7.0, vs. pH 5.0, promotes the pepsin-effect on HCs, causing increased internalized pepsin and cell viability, a pronounced activation of EGFR accompanied by NF-κB and STAT3 activation, and a significant upregulation of EGFR, AKT1, mTOR, IL1β, TNF-α, RELA(p65), BCL-2, IL6, and STAT3. We herein provide new evidence of the pepsin-effect on oncogenic EGFR activation and its related-signaling pathway at neutral and slightly acidic pH in HCs, opening a window to further explore the prevention and therapeutic approach of laryngopharyngeal reflux disease.
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- 2021
13. Activity-specificity trade-off gives PI5P4Kβ a nucleotide preference to function as a GTP-sensing kinase
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Hongyang Yu, So Nakagawa, Kaori Fukuzawa, Koh Takeuchi, Ayaka Harada, Miki Senda, Koji Okuwaki, Mika Sasaki, Yoshiki Ikeda, Yu Hua Lo, Atsuo T. Sasaki, Lisa Nagase, Misaki Imai, and Toshiya Senda
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chemistry.chemical_classification ,chemistry.chemical_compound ,Enzyme ,Functional evolution ,chemistry ,GTP' ,Kinase ,Xanthosine triphosphate ,Biophysics ,Nucleotide ,Phosphatidylinositol ,Inosine triphosphate - Abstract
SummaryMost kinases function with ATP. However, contrary to the prevailing dogma, phosphatidylinositol 5-phosphate 4-kinase β (PI5P4Kβ) utilizes GTP as a primary phosphate donor with a unique binding mode for GTP. Although PI5P4Kβ is evolved from a primordial ATP-utilizing enzyme, PI4P5K, how PI5P4Kβ evolutionarily acquired the GTP preference to function as a cellular GTP sensor remains unclear. In this study, we show that the short nucleotide base-recognition motif, TRNVF, is responsible for the GTP binding of PI5P4Kβ, and also confers onto PI5P4Kβ an unexpected specificity that extends to inosine triphosphate (ITP) and xanthosine triphosphate (XTP). A mutational study with GTP analogues suggests that the extended specificity is an obligatory consequence to the acquisition of GTP-dependent activity. However, as the cellular concentrations of ITP and XTP are typically negligible, PI5P4Kβ can still function as a GTP sensor, suggesting that the cellular physiological conditions leave room for the functional evolution of PI5P4Kβ.
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- 2020
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14. Ubiquinol-10 Intake Is Effective in Relieving Mild Fatigue in Healthy Individuals
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Kei Mizuno, Yasuyoshi Watanabe, Akihiro T. Sasaki, and Kyosuke Watanabe
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Adult ,Male ,0301 basic medicine ,Relaxation ,Ubiquinol ,Elementary cognitive task ,Ubiquinone ,Trail Making Test ,lcsh:TX341-641 ,Placebo ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Double-Blind Method ,motivation ,Surveys and Questionnaires ,Humans ,Medicine ,oxidative stress ,Nutritional Physiological Phenomena ,cognitive function ,Coenzyme Q10 ,Nutrition and Dietetics ,Autonomic nerve ,Relaxation (psychology) ,business.industry ,ubiquinol ,Middle Aged ,Healthy Volunteers ,030104 developmental biology ,chemistry ,Anesthesia ,Dietary Supplements ,Digit symbol substitution test ,autonomic nerve function ,Female ,fatigue ,business ,lcsh:Nutrition. Foods and food supply ,030217 neurology & neurosurgery ,Food Science - Abstract
Our double-blind, placebo-controlled study evaluated effects of ubiquinol, the reduced form of coenzyme Q10, on mild fatigue in healthy individuals experiencing fatigue in daily life that had continued for more than 1 and less than 6 months. The participants received 100-mg/day (Ubq100, age 44.0 ±, 9.8 years, 14 females and 6 males) or 150-mg/day ubiquinol (Ubq150, age 40.4 ±, 11.8 years, 14 females and 8 males) or placebo (Plc, age 41.3 ±, 13.4 years, 13 females and 7 males) daily for 12 weeks. Measurements of subjective and objective fatigue were conducted by using questionnaires-based fatigue scales/visual analogue scales and autonomic nerve function/biological oxidation index, respectively, prior to the first dosing and every 4 weeks thereafter. Serum ubiquinol level increased three- to four-fold after 4 weeks and remained significantly higher than that after Plc administration throughout the intake period. Although a higher blood level of ubiquinol was observed with Ubq150 than with Ubq100, the difference was not statistically significant. In both Ubq100 and Ubq150 groups, subjective levels of fatigue sensation and sleepiness after cognitive tasks, which consisted of the modified Advanced Trail Making Test, the modified Stroop Color-Word Test, and the Digit Symbol Substitution Test, improved significantly compared with those in the placebo group, suggesting an anti-fatigue effect. The Ubq150 group demonstrated significant improvement compared with the Plc group regarding subjective level of relaxation after task, sleepiness before and after task, motivation for task, and serum level of oxidative stress. Correlation analysis between blood level of ubiquinol and each evaluated effect suggested a positive relationship with relaxation after task, motivation for cognitive task, and parasympathetic activity. The results of the study suggest that ubiquinol intake relieves mild fatigue in healthy individuals.
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- 2020
15. GTP metabolic reprogramming by IMPDH2: unlocking cancer cells' fuelling mechanism
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Atsuo T. Sasaki and Satoshi Kofuji
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Inosine monophosphate ,Anabolism ,GTP' ,Guanosine triphosphate ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,IMP Dehydrogenase ,Biosynthesis ,Transcription (biology) ,Neoplasms ,JB Reviews ,Humans ,Molecular Biology ,030304 developmental biology ,Cell Proliferation ,chemistry.chemical_classification ,0303 health sciences ,General Medicine ,Cellular Reprogramming ,Cell biology ,Enzyme ,chemistry ,030220 oncology & carcinogenesis ,Cancer cell ,Guanosine Triphosphate - Abstract
Growing cells increase multiple biosynthetic processes in response to the high metabolic demands needed to sustain proliferation. The even higher metabolic requirements in the setting of cancer provoke proportionately greater biosynthesis. Underappreciated key aspects of this increased metabolic demand are guanine nucleotides and adaptive mechanisms to regulate their concentration. Using the malignant brain tumour, glioblastoma, as a model, we have demonstrated that one of the rate-limiting enzymes for guanosine triphosphate (GTP) synthesis, inosine monophosphate dehydrogenase-2 (IMPDH2), is increased and IMPDH2 expression is necessary for the activation of de novo GTP biosynthesis. Moreover, increased IMPDH2 enhances RNA polymerase I and III transcription directly linking GTP metabolism to both anabolic capacity as well as nucleolar enlargement historically observed as associated with cancer. In this review, we will review in detail the basis of these new discoveries and, more generally, summarize the current knowledge on the role of GTP metabolism in cancer.
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- 2020
16. Enzymatic digestibility and hydration properties of submicron-scale rice flour
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Hiroshi Okadome, Itaru Sotome, T. Sasaki, Md. Sharif Hossen, and Kazuko Nanayama
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Chemistry ,Food science ,Horticulture ,Rice flour ,Submicron scale - Published
- 2018
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17. In Vivo Short-Term Topical Application of BAY 11-7082 Prevents the Acidic Bile–Induced mRNA and miRNA Oncogenic Phenotypes in Exposed Murine Hypopharyngeal Mucosa
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Clarence T. Sasaki, Sotirios G. Doukas, and Dimitra P. Vageli
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0301 basic medicine ,Cancer Research ,biology ,Cell growth ,Chemistry ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,lcsh:RC254-282 ,Molecular biology ,In vitro ,Blot ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Real-time polymerase chain reaction ,Downregulation and upregulation ,In vivo ,030220 oncology & carcinogenesis ,microRNA ,biology.protein ,STAT3 - Abstract
PURPOSE: Bile-containing gastroesophageal reflux may promote cancer at extraesophageal sites. Acidic bile can accelerate NF-κB activation and molecular events, linked to premalignant changes in murine hypopharyngeal mucosa (HM). We hypothesize that short-term in vivo topical application of NF-κB inhibitor BAY 11-7082 can prevent acidic bile–induced early preneoplastic molecular events, suggesting its potential role in disease prevention. EXPERIMENTAL DESIGN: We topically exposed HM (C57Bl/6j wild-type) to a mixture of bile acids at pH 3.0 with and without BAY 11-7082 3 times/day for 7 days. We used immunofluorescence, Western blotting, immunohistochemistry, quantitative polymerase chain reaction, and polymerase chain reaction microarrays to identify NF-κB activation and its associated oncogenic mRNA and miRNA phenotypes, in murine hypopharyngeal cells in vitro and in murine HM in vivo. RESULTS: Short-term exposure of HM to acidic bile is a potent stimulus accelerating the expression of NF-κB signaling (70 out of 84 genes) and oncogenic molecules. Topical application of BAY 11-7082 sufficiently blocks the effect of acidic bile. BAY 11-7082 eliminates NF-κB activation in regenerating basal cells of acidic bile–treated HM and prevents overexpression of molecules central to head and neck cancer, including bcl-2, STAT3, EGFR, TNF-α, and WNT5A. NF-κB inhibitor reverses the upregulated “oncomirs” miR-155 and miR-192 and the downregulated “tumor suppressors” miR-451a and miR-375 phenotypes in HM affected by acidic bile. CONCLUSION: There is novel evidence that acidic bile–induced NF-κB–related oncogenic mRNA and miRNA phenotypes are generated after short-term 7-day mucosal exposure and that topical mucosal application of BAY 11-7082 can prevent the acidic bile–induced molecular alterations associated with unregulated cell growth and proliferation of hypopharyngeal cells.
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- 2018
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18. <scp>NF</scp> ‐κB inhibition reverses acidic bile‐induced miR‐21, miR‐155, miR‐192, miR‐34a, miR‐375 and miR‐451a deregulations in human hypopharyngeal cells
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Dimitra P. Vageli, Clarence T. Sasaki, and Sotirios G. Doukas
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miR‐34a ,0301 basic medicine ,Transcription, Genetic ,chemistry.chemical_compound ,0302 clinical medicine ,miR‐155 ,Mir-375 ,Neoplasms ,Sulfones ,miR‐192 ,Phosphorylation ,Luciferases ,Cells, Cultured ,Chemistry ,NF-kappa B ,BAY 11‐7082 ,Hypopharyngeal cancer ,Phenotype ,Gene Expression Regulation, Neoplastic ,Protein Transport ,030220 oncology & carcinogenesis ,Molecular Medicine ,Original Article ,Cell Survival ,Bile Acids and Salts ,miR-155 ,03 medical and health sciences ,miR‐375 ,Nitriles ,microRNA ,medicine ,Humans ,Gene ,miR‐21 ,Cell Nucleus ,bile acids ,miR‐451a ,NF‐κB ,NF-κB ,Original Articles ,Cell Biology ,medicine.disease ,In vitro ,Hypopharynx ,MicroRNAs ,030104 developmental biology ,Gene Expression Regulation ,Cancer research ,hypopharyngeal cancer - Abstract
We previously demonstrated that acidic bile activates NF‐κB, deregulating the expression of oncogenic miRNA markers, in pre‐malignant murine laryngopharyngeal mucosa. Here, we hypothesize that the in vitro exposure of human hypopharyngeal cells to acidic bile deregulates cancer‐related miRNA markers that can be reversed by BAY 11‐7082, a pharmacologic NF‐κB inhibitor. We repetitively exposed normal human hypopharyngeal primary cells and human hypopharyngeal keratinocytes to bile fluid (400 μmol/L), at pH 4.0 and 7.0, with/without BAY 11‐7082 (20 μmol/L). We centred our study on the transcriptional activation of oncogenic miR‐21, miR‐155, miR‐192, miR‐34a, miR‐375, miR‐451a and NF‐κB‐related genes, previously linked to acidic bile‐induced pre‐neoplastic events. Our novel findings in vitro are consistent with our hypothesis demonstrating that BAY 11‐7082 significantly reverses the acidic bile‐induced oncogenic miRNA phenotype, in normal hypopharyngeal cells. BAY 11‐7082 strongly inhibits the acidic bile‐induced up‐regulation of miR‐192 and down‐regulation of miR‐451a and significantly decreases the miR‐21/375 ratios, previously related to poor prognosis in hypopharyngeal cancer. This is the first in vitro report that NF‐κB inhibition reverses acidic bile‐induced miR‐21, miR‐155, miR‐192, miR‐34a, miR‐375 and miR‐451a deregulations in normal human hypopharyngeal cells, suggesting that acidic bile‐induced events are directly or indirectly dependent on NF‐κB signalling.
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- 2018
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19. Associations between the results of hepatotoxicity-related in vitro assays and rat repeated-dose liver toxicity of chemical compounds
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Ryota Shizu, Y. Kanno, T. Hosaka, T. Sasaki, and Kouichi Yoshinari
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Liver toxicity ,Chemistry ,In vitro toxicology ,General Medicine ,Pharmacology ,Toxicology - Published
- 2021
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20. Inhibition of NF-κB prevents the acidic bile-induced oncogenic mRNA phenotype, in human hypopharyngeal cells
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Dimitra P. Vageli, Sotirios G. Doukas, and Clarence T. Sasaki
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0301 basic medicine ,biology ,Chemistry ,medicine.disease_cause ,Phenotype ,Gene expression profiling ,WNT5A ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Oncology ,Cell culture ,030220 oncology & carcinogenesis ,biology.protein ,medicine ,Cancer research ,Signal transduction ,STAT3 ,Carcinogenesis ,Transcription factor - Abstract
Bile-containing gastro-duodenal reflux has been clinically considered an independent risk factor in hypopharyngeal carcinogenesis. We recently showed that the chronic effect of acidic bile, at pH 4.0, selectively induces NF-κB activation and accelerates the transcriptional levels of genes, linked to head and neck cancer, in normal hypopharyngeal epithelial cells. Here, we hypothesize that NF-κB inhibition is capable of preventing the acidic bile-induced and cancer-related mRNA phenotype, in treated normal human hypopharyngeal cells. In this setting we used BAY 11-7082, a specific and well documented pharmacologic inhibitor of NF-κB, and we observed that BAY 11-7082 effectively inhibits the acidic bile-induced gene expression profiling of the NF-κB signaling pathway (down-regulation of 72 out of 84 analyzed genes). NF-κB inhibition significantly prevents the acidic bile-induced transcriptional activation of NF-κB transcriptional factors, RELA (p65) and c-REL, as well as genes related to and commonly found in established HNSCC cell lines. These include anti-apoptotic bcl-2, oncogenic STAT3, EGFR, ∆Np63, TNF-α and WNT5A, as well as cytokines IL-1β and IL-6. Our findings are consistent with our hypothesis demonstrating that NF-κB inhibition effectively prevents the acidic bile-induced cancer-related mRNA phenotype in normal human hypopharyngeal epithelial cells supporting an understanding that NF-κB may be a critical link between acidic bile and early preneoplastic events in this setting.
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- 2017
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21. Prognostic significance of PD-L1 expression on circulating tumor cells in patients with head and neck squamous cell carcinoma
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Christos Perisanidis, Amanda Psyrri, Panagiota Economopoulou, Martine Mazel, Catherine Alix-Panabières, Evi Lianidou, Clarence T. Sasaki, Georgios Papaxoinis, Martha Zavridou, Margaritis Avgeris, Areti Strati, George Koutsodontis, Ioannis Kotsantis, Ilias Angelidis, and Centre Hospitalier Régional Universitaire [Montpellier] (CHRU Montpellier)
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Male ,PD-L1 ,0301 basic medicine ,Oncology ,medicine.medical_specialty ,[SDV]Life Sciences [q-bio] ,medicine.medical_treatment ,circulating tumor cells ,head and neck squamous cell carcinoma ,Polymerase Chain Reaction ,B7-H1 Antigen ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Circulating tumor cell ,Cancer immunotherapy ,Limit of Detection ,Internal medicine ,Humans ,Medicine ,Liquid biopsy ,Prospective cohort study ,Aged ,cancer immunotherapy ,liquid biopsy ,biology ,Squamous Cell Carcinoma of Head and Neck ,business.industry ,Reproducibility of Results ,Induction chemotherapy ,Epithelial cell adhesion molecule ,Hematology ,Middle Aged ,Neoplastic Cells, Circulating ,Prognosis ,medicine.disease ,Survival Analysis ,Head and neck squamous-cell carcinoma ,030104 developmental biology ,chemistry ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Carcinoma, Squamous Cell ,biology.protein ,Female ,business ,checkpoint inhibitors - Abstract
International audience; Background: Successful application of programmed death 1 (PD1) checkpoint inhibitors in the clinic may ultimately benefit from appropriate patient selection based upon predictive biomarkers. Molecular characterization of circulating tumor cells (CTC) is crucial for the investigation of molecular-targeted therapies while predictive biomarkers for response to PD1 checkpoint inhibitors are lacking. We sought to assess whether overexpression of PD-L1 in CTCs could be detected at baseline and at different timepoints during treatment in a prospective cohort of head and neck squamous cell carcinoma (HNSCC) patients and used to predict clinical outcome after treatment with curative intent. Patients and methods: We developed a highly sensitive, specific and robust RT-qPCR assay for PD-L1 mRNA expression in EpCAM(+) CTCs. In a prospective cohort of 113 locally advanced HNSCC patients treated with curative intent we evaluated PD-L1 expression in the EpCAM(+) CTC fraction at baseline, after 2 cycles of induction chemotherapy (week 6) and at the end of concurrent chemoradiotherapy (week 15). Results: PD-L1 overexpression was found in 24/94 (25.5%) patients at baseline, 8/34 (23.5%) after induction chemotherapy and 12/54 (22.2%) patients at the end of treatment. Patients with CTCs overexpressing PD-L1 at end of treatment had shorter progression-free survival (P = 0.001) and overall survival (P \textless 0.001). Multivariate analysis revealed that PD-L1 overexpression at end of treatment was independent prognostic factor for progression-free survival and overall survival. The absence of PD-L1 overexpression at the end of treatment was strongly associated with complete response with an odds ratio = 16.00 (95% CI = 2.76-92.72, P = 0.002). Conclusions: We demonstrate that detection of CTCs overexpressing PD-L1 is feasible and may provide important prognostic information in HNSCC. Our results suggest that adjuvant PD1 inhibitors deserve evaluation in HNSCC patients in whom PD-L1(+) CTCs are detected at the end of curative treatment.
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- 2017
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22. In-vitro evaluation of MPA-loaded electrospun coaxial fiber membranes for local treatment of glioblastoma tumor cells
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Andrew J. Steckl, Daewoo Han, Hirofumi Yoshino, Mika Sasaki, Atsuo T. Sasaki, and Satoshi Kofuji
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0301 basic medicine ,chemistry.chemical_classification ,Materials science ,Polyvinylpyrrolidone ,technology, industry, and agriculture ,Pharmaceutical Science ,Nanotechnology ,02 engineering and technology ,Polymer ,021001 nanoscience & nanotechnology ,Core (optical fiber) ,stomatognathic diseases ,03 medical and health sciences ,030104 developmental biology ,Membrane ,chemistry ,Nanofiber ,Drug delivery ,medicine ,Biophysics ,Fiber ,Coaxial ,0210 nano-technology ,medicine.drug - Abstract
Core-sheath fibers containing a drug for brain tumor are reported. Mycophenolic acid (MPA), a FDA-approved immunosuppressant, has been demonstrated to inhibit several types of tumor cells growth. However, the effective serum MPA concentration for anti-tumor declines quickly in-vivo due to degradation in the liver, which hampers the development of MPA-based anti-tumor therapy. To overcome this issue, we have formed MPA-containing electrospun fiber membranes as local drug delivery vehicle and characterized MPA release profiles based on fiber composition and geometry. Coaxial fibers with poly(e-caprolactone) (PCL)/MPA core and PCL sheath provided a more sustained release than homogenous fibers. In particular, thicker PCL sheath with 1:10 ratio of sheath thickness to fiber diameter provides gradual release in an initial period and higher MPA release after refreshing of media. The host polymer for MPA has a significant effect on the MPA release, with PCL/MPA single fiber providing more sustained release than coaxial fibers with polyvinylpyrrolidone (PVP)/MPA core and PCL sheath. In-vitro glioblastoma multiforme (GBM) tumor cell culture results show strong cell suppression effect by MPA-containing fiber membranes, with coaxial fiber membranes inhibiting GBM cell growth 3-5 × more than the single fiber membranes. This indicates that MPA-containing electrospun membranes have a promising potential for local treatment of GBM.
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- 2017
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23. 2D Oxide and Hydroxide Nanosheets: Synthesis, Layer-by-Layer Assembly and Function Design
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T. Sasaki, Y. Ebina, N. Sakai, R. Ma, and M. Osada
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chemistry.chemical_compound ,Materials science ,chemistry ,Chemical engineering ,Layer by layer ,Oxide ,Hydroxide ,Function (mathematics) - Published
- 2019
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24. Identification of lysine methylation in the core GTPase domain by GoMADScan
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Konstantin I. Popov, Guowei Yin, Kara Wolfe, Sharon L. Campbell, Sasson Haviv, Risa Kawaguchi, Atsuo T. Sasaki, Satoshi Kofuji, Shigeki Iwase, Emily Rose Kahoud, Brenda Temple, Hiroko Shimada, Hirofumi Yoshino, John M. Asara, Yoshiki Ikeda, Nazanin Majd, Mika Sasaki, Kaori Kofuji, Koichi Okumura, Akshiv Malhotra, and Jaskirat Randhawa
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Multidisciplinary ,Chemistry ,Lysine ,Science ,Correction ,Methylation ,GTPase ,Molecular Dynamics Simulation ,Domain (software engineering) ,Cell biology ,GTP Phosphohydrolases ,Protein Domains ,Data Mining ,Medicine ,Amino Acid Sequence ,Protein Processing, Post-Translational - Abstract
RAS is the founding member of a superfamily of GTPases and regulates signaling pathways involved in cellular growth control. While recent studies have shown that the activation state of RAS can be controlled by lysine ubiquitylation and acetylation, the existence of lysine methylation of the RAS superfamily GTPases remains unexplored. In contrast to acetylation, methylation does not alter the side chain charge and it has been challenging to deduce its impact on protein structure by conventional amino acid substitutions. Herein, we investigate lysine methylation on RAS and RAS-related GTPases. We developed GoMADScan (Go language-based Modification Associated Database Scanner), a new user-friendly application that scans and extracts posttranslationally modified peptides from databases. The GoMADScan search on PhosphoSitePlus databases identified methylation of conserved lysine residues in the core GTPase domain of RAS superfamily GTPases, including residues corresponding to RAS Lys-5, Lys-16, and Lys-117. To follow up on these observations, we immunoprecipitated endogenous RAS from HEK293T cells, conducted mass spectrometric analysis and found that RAS residues, Lys-5 and Lys-147, undergo dimethylation and monomethylation, respectively. Since mutations of Lys-5 have been found in cancers and RASopathies, we set up molecular dynamics (MD) simulations to assess the putative impact of Lys-5 dimethylation on RAS structure. Results from our MD analyses predict that dimethylation of Lys-5 does not significantly alter RAS conformation, suggesting that Lys-5 methylation may alter existing protein interactions or create a docking site to foster new interactions. Taken together, our findings uncover the existence of lysine methylation as a novel posttranslational modification associated with RAS and the RAS superfamily GTPases, and putative impact of Lys-5 dimethylation on RAS structure.
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- 2019
25. Weakly Acidic Bile Is a Risk Factor for Hypopharyngeal Carcinogenesis Evidenced by DNA Damage, Antiapoptotic Function, and Premalignant Dysplastic Lesions In Vivo
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Panagiotis G Doukas, Sotirios G. Doukas, Dimitra P. Vageli, and Clarence T. Sasaki
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0301 basic medicine ,Cancer Research ,DNA damage ,medicine.drug_class ,bile ,medicine.disease_cause ,lcsh:RC254-282 ,Article ,NF-κB ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,In vivo ,medicine ,Receptor ,Carcinogen ,Bile acid ,laryngopharyngeal reflux ,Deoxycholic acid ,Hypopharyngeal cancer ,weakly acidic reflux ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,in vivo ,030104 developmental biology ,Oncology ,chemistry ,030220 oncology & carcinogenesis ,Cancer research ,head and neck cancer ,Carcinogenesis ,hypopharyngeal cancer - Abstract
Background: There is recent in vivo discovery documenting the carcinogenic effect of bile at strongly acidic pH 3.0 in hypopharynx, while in vitro data demonstrate that weakly acidic bile (pH 5.5) has a similar oncogenic effect. Because esophageal refluxate often occurs at pH >, 4.0, here we aim to determine whether weakly acidic bile is also carcinogenic in vivo. Methods: Using 32 wild-type mice C57B16J, we performed topical application of conjugated primary bile acids with or without unconjugated secondary bile acid, deoxycholic acid (DCA), at pH 5.5 and controls, to hypopharyngeal mucosa (HM) twice per day, for 15 weeks. Results: Chronic exposure of HM to weakly acidic bile, promotes premalignant lesions with microinvasion, preceded by significant DNA/RNA oxidative damage, γH2AX (double strand breaks), NF-κB and p53 expression, overexpression of Bcl-2, and elevated Tnf and Il6 mRNAs, compared to controls. Weakly acidic bile, without DCA, upregulates the “oncomirs”, miR-21 and miR-155. The presence of DCA promotes Egfr, Wnt5a, and Rela overexpression, and a significant downregulation of “tumor suppressor” miR-451a. Conclusion: Weakly acidic pH increases the risk of bile-related hypopharyngeal neoplasia. The oncogenic properties of biliary esophageal reflux on the epithelium of the upper aerodigestive tract may not be fully modified when antacid therapy is applied. We believe that due to bile content, alternative therapeutic strategies using specific inhibitors of relevant molecular pathways or receptors may be considered in patients with refractory GERD.
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- 2021
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26. Targeting cancer metabolism by simultaneously disrupting parallel nutrient access pathways
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Bruce J. Tromberg, Seong M. Kim, Robert Edwards, Stephen Hanessian, Ryan J. McMonigle, Garret Guenther, Aimee L. Edinger, Tricia T. Nguyen, Eric O. Potma, Brendan T. Finicle, Yanling Zhang, Bin Chen, Tiffany M. Nguyen, Jue Hou, Atsuo T. Sasaki, Archna Ravi, Satoshi Kofuji, Mari Kono, Lois S. Weisman, Alison N. McCracken, Saurabh G. Roy, Manuel U. Ramirez, Timothy Wiher, and Elizabeth Selwan
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0301 basic medicine ,Autophagosome ,media_common.quotation_subject ,Biological Transport, Active ,Enzyme Activators ,Mice ,Phosphatidylinositol 3-Kinases ,03 medical and health sciences ,PIKFYVE ,Phosphatidylinositol Phosphates ,Cell Line, Tumor ,Neoplasms ,Medicine and Health Sciences ,Animals ,Humans ,Protein Phosphatase 2 ,Macropinosome ,Internalization ,media_common ,Mice, Knockout ,2. Zero hunger ,Sphingolipids ,Kinase ,Chemistry ,Autophagy ,General Medicine ,Protein phosphatase 2 ,Neoplasm Proteins ,Cell biology ,030104 developmental biology ,Biochemistry ,Cancer cell ,Drug Screening Assays, Antitumor ,Research Article - Abstract
Oncogenic mutations drive anabolic metabolism, creating a dependency on nutrient influx through transporters, receptors, and macropinocytosis. While sphingolipids suppress tumor growth by downregulating nutrient transporters, macropinocytosis and autophagy still provide cancer cells with fuel. Therapeutics that simultaneously disrupt these parallel nutrient access pathways have potential as powerful starvation agents. Here, we describe a water-soluble, orally bioavailable synthetic sphingolipid, SH-BC-893, that triggers nutrient transporter internalization and also blocks lysosome-dependent nutrient generation pathways. SH-BC-893 activated protein phosphatase 2A (PP2A), leading to mislocalization of the lipid kinase PIKfyve. The concomitant mislocalization of the PIKfyve product PI(3,5)P2 triggered cytosolic vacuolation and blocked lysosomal fusion reactions essential for LDL, autophagosome, and macropinosome degradation. By simultaneously limiting access to both extracellular and intracellular nutrients, SH-BC-893 selectively killed cells expressing an activated form of the anabolic oncogene Ras in vitro and in vivo. However, slower-growing, autochthonous PTEN-deficient prostate tumors that did not exhibit a classic Warburg phenotype were equally sensitive. Remarkably, normal proliferative tissues were unaffected by doses of SH-BC-893 that profoundly inhibited tumor growth. These studies demonstrate that simultaneously blocking parallel nutrient access pathways with sphingolipid-based drugs is broadly effective and cancer selective, suggesting a potential strategy for overcoming the resistance conferred by tumor heterogeneity.
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- 2016
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27. Clinical efficacy and safety of topiroxostat in Japanese male hyperuricemic patients with or without gout: an exploratory, phase 2a, multicentre, randomized, double‐blind, placebo‐controlled study
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Tatsuo Hosoya, T Sasaki, R. Sakamoto, T Ohashi, and H. Hashimoto
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Adult ,Male ,Xanthine Oxidase ,medicine.medical_specialty ,Gout ,Pyridines ,030232 urology & nephrology ,Placebo-controlled study ,Hyperuricemia ,030204 cardiovascular system & hematology ,Placebo ,Gout Suppressants ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Double-Blind Method ,Japan ,Internal medicine ,Nitriles ,medicine ,Humans ,Pharmacology (medical) ,Adverse effect ,Pharmacology ,Dose-Response Relationship, Drug ,business.industry ,Middle Aged ,medicine.disease ,Confidence interval ,Uric Acid ,Surgery ,Topiroxostat ,Treatment Outcome ,chemistry ,Uric acid ,business ,Follow-Up Studies - Abstract
Summary What is known and objective In Japan, although topiroxostat, a selective xanthine oxidoreductase inhibitor, has been used for the treatment of patients with hyperuricemia including gout, no published randomized controlled studies evaluating the dose-dependent relationship with respect to the serum urate-lowering efficacy have been reported. The aim of this study was to evaluate the dose-dependent relationship with serum urate-lowering efficacy and safety of topiroxostat in Japanese hyperuricemic patients including gout. Methods We conducted an exploratory, phase 2a, multicentre, randomized, double-blind, 8-week, placebo-controlled study in Japanese hyperuricemic patients with or without gout. The study arms were placebo and topiroxostat 40, 60, 80 or 120 mg/day. The primary efficacy endpoint was the per cent change in serum urate level from baseline to the final visit. Results and discussion One hundred and eighty-seven eligible patients were randomized and 186 received at least one dose of the study drug. The study results demonstrated a dose-dependent serum urate reduction effect ranging from 40 to 120 mg/day (P < 0·001, Jonckheere–Terpstra test). The mean per cent change in serum urate level from baseline at the final visit was −30·8% in the 120-mg group and 1·6% with placebo, with a between-group difference of −32·4% ([95% confidence interval, −38·9% to −25·9%]; P < 0·001). Incidences of overall adverse events (AEs) in the topiroxostat groups were comparable to those in the placebo group; however, the incidence of AEs in the 120-mg group was statistically lower than that in the placebo group. The incidences of gouty arthritis were not statistically but numerically higher in the topiroxostat 80- and 120-mg groups. What is new and conclusions A dose-dependent serum urate-lowering efficacy of topiroxostat was observed in Japanese hyperuricemic male patients with or without gout. Further clinical studies aimed at evaluating the long-term safety and clinical efficacy are warranted.
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- 2016
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28. The role of bile reflux and its related NF-κB activated pathway in progression of hypopharyngeal squamous cell cancer
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Clarence T. Sasaki, Dimitra P. Vageli, Michael Hajek, and Sotirios G. Doukas
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Cancer Research ,medicine.disease_cause ,Bile reflux ,03 medical and health sciences ,Laryngopharyngeal reflux ,chemistry.chemical_compound ,0302 clinical medicine ,Cell Line, Tumor ,medicine ,Humans ,Neoplasms, Squamous Cell ,030223 otorhinolaryngology ,STAT3 ,Hypopharyngeal Neoplasms ,biology ,business.industry ,Bile Reflux ,NF-kappa B ,Hypopharyngeal cancer ,NF-κB ,Prognosis ,medicine.disease ,Blot ,Oncology ,chemistry ,Cell culture ,030220 oncology & carcinogenesis ,Disease Progression ,biology.protein ,Cancer research ,Oral Surgery ,Carcinogenesis ,business - Abstract
Background Prognosis for hypopharyngeal cancer is usually poor, and recurrence is common. Identifying new factors or related mechanisms that promote its progression may have clinical implications. Although, recent studies support bile reflux in hypopharyngeal carcinogenesis, it remains to be explored how bile and its related NF-κB activated pathway may further affects its progression in already established hypopharyngeal cancer. Methods Hypopharyngeal squamous cell carcinoma (HSCC) cell lines, FaDu and UMSCC11A, both negative for HPV, were repetitively exposed to bile acids (400 μM) at variable pH points (4.0, 5.5 and 7.0). Immunofluorescence, western blotting, luciferase assay, and qPCR were used to detect NF-κB activation, bcl-2 overexpression and gene expression. Results Bile at strongly acidic pH (4.0) potentiated the activation of NF-κB and its related mRNA phenotype in HSCC cells. IL-6, TNF-α, and BCL2 were found among the highest overexpressed genes as was previously found in HSCCs excised from patients with documented biliary reflux. An enhanced transcriptional activity of EGFR, RELA, STAT3, and WNT5Α and higher survival rates were observed in HSCC cells exposed to acidic bile compared to those exposed to bile at weakly acidic or neutral pH. Conclusion Our novel findings support the observation that bile reflux has the potential for actively influencing the progression of hypopharyngeal cancer, mediated by NF-κB. In patients with hypopharyngeal cancer and known gastroesophageal reflux disease, antacid therapy may exert a role in furthering control of disease recurrence and progression.
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- 2020
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29. Curcumin prevents the bile reflux-induced NF-κB-related mRNA oncogenic phenotype, in human hypopharyngeal cells
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Clarence T. Sasaki, Todd Spock, Dimitra P. Vageli, and Sotirios G. Doukas
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0301 basic medicine ,gastroesophageal reflux ,Bile reflux ,chemistry.chemical_compound ,0302 clinical medicine ,STAT3 ,biology ,medicine.diagnostic_test ,NF-kappa B ,Hydrogen-Ion Concentration ,Hedgehog signaling pathway ,ErbB Receptors ,Phenotype ,Proto-Oncogene Proteins c-bcl-2 ,030220 oncology & carcinogenesis ,Molecular Medicine ,Original Article ,Signal Transduction ,STAT3 Transcription Factor ,Curcumin ,Primary Cell Culture ,bile ,Wnt-5a Protein ,Bile Acids and Salts ,03 medical and health sciences ,Western blot ,In vivo ,medicine ,Anticarcinogenic Agents ,Humans ,Luciferase ,RNA, Messenger ,Interleukin-6 ,Tumor Necrosis Factor-alpha ,NF‐κB ,Transcription Factor RelA ,NF-κB ,Epithelial Cells ,Cell Biology ,Original Articles ,medicine.disease ,Proto-Oncogene Proteins c-rel ,Hypopharynx ,030104 developmental biology ,chemistry ,Gene Expression Regulation ,Cancer research ,biology.protein ,head and neck cancer - Abstract
The presence of bile is not an uncommon finding in acidic oesophageal and extra‐oesophageal refluxate, possibly affecting the hypopharyngeal mucosa and leading to neoplastic events. We recently demonstrated that acidic bile (pH ≤ 4.0) can induce NF‐κB activation and oncogenic mRNA phenotype in normal hypopharyngeal cells and generate premalignant changes in treated hypopharyngeal mucosa. We hypothesize that curcumin, a dietary inhibitor of NF‐κB, may effectively inhibit the acidic bile‐induced cancer‐related mRNA phenotype, in treated human hypopharyngeal primary cells (HHPC), supporting its potential preventive use in vivo. Luciferase assay, immunofluorescence, Western blot, qPCR and PCR microarray analysis were used to explore the effect of curcumin in HHPC exposed to bile (400 μmol/L) at acidic and neutral pH. Curcumin successfully inhibited the acidic bile‐induced NF‐κB signalling pathway (25% of analysed genes), and overexpression of NF‐κB transcriptional factors, c‐REL, RELA(p65), anti‐apoptotic bcl‐2, oncogenic TNF‐α, EGFR, STAT3, WNT5A, ΔNp63 and cancer‐related IL‐6. Curcumin effectively reduced bile‐induced bcl‐2 overexpression at both acidic and neutral pH. Our novel findings suggest that, similar to pharmacologic NF‐κB inhibitor, BAY 11‐7082, curcumin can suppress acidic bile‐induced oncogenic mRNA phenotype in hypopharyngeal cells, encouraging its future in vivo pre‐clinical and clinical explorations in prevention of bile reflux‐related pre‐neoplastic events mediated by NF‐κB.
- Published
- 2018
30. SAT-269 URINE ESTIMATED AMMONIUM-TO-CREATININE RATIO IN PATIENTS WITH CHRONIC KIDNEY DISEASE
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Go Kanzaki, T. Sasaki, Yusuke Okabayashi, N. Matsumoto, Nobuo Tsuboi, Kentaro Koike, S. Hatanaka, Kotaro Haruhara, and Takashi Yokoo
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Creatinine ,medicine.medical_specialty ,business.industry ,Urology ,Urine ,medicine.disease ,chemistry.chemical_compound ,chemistry ,Nephrology ,Medicine ,Ammonium ,In patient ,business ,Kidney disease - Published
- 2019
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31. Low Temperature Processed Atomically Thin Perovskite Oxide as Electron Transporting Layer in Perovskite Solar Cells
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S.-S. Li, Y.-H. Tsai, T. Sasaki, K. Tsukagoshi, M. Osada, and C.-W. Chen
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chemistry.chemical_compound ,Electron transporting layer ,Materials science ,Chemical engineering ,chemistry ,Oxide ,Perovskite (structure) - Published
- 2017
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32. Anti-Tumor Potential of IMP Dehydrogenase Inhibitors: A Century-Long Story
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Nazanin Majd, Punita Grover, Hongyang Yu, Kara Wolfe, Toshiya Senda, Atsuo T. Sasaki, Satoshi Kofuji, Arun Sendilnathan, Rand Naffouje, Eric P. Smith, and Koh Takeuchi
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0301 basic medicine ,Purine ,Cancer Research ,GTP' ,Review ,medicine.disease_cause ,lcsh:RC254-282 ,IMPDH ,03 medical and health sciences ,chemistry.chemical_compound ,purine synthesis ,0302 clinical medicine ,IMP dehydrogenase ,medicine ,Nucleotide ,anti-tumor ,Purine metabolism ,IMPDH inhibitors ,chemistry.chemical_classification ,Cell growth ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,3. Good health ,030104 developmental biology ,Enzyme ,Oncology ,chemistry ,030220 oncology & carcinogenesis ,Cancer research ,Carcinogenesis ,mycophenolic acid ,GTP - Abstract
The purine nucleotides ATP and GTP are essential precursors to DNA and RNA synthesis and fundamental for energy metabolism. Although de novo purine nucleotide biosynthesis is increased in highly proliferating cells, such as malignant tumors, it is not clear if this is merely a secondary manifestation of increased cell proliferation. Suggestive of a direct causative effect includes evidence that, in some cancer types, the rate-limiting enzyme in de novo GTP biosynthesis, inosine monophosphate dehydrogenase (IMPDH), is upregulated and that the IMPDH inhibitor, mycophenolic acid (MPA), possesses anti-tumor activity. However, historically, enthusiasm for employing IMPDH inhibitors in cancer treatment has been mitigated by their adverse effects at high treatment doses and variable response. Recent advances in our understanding of the mechanistic role of IMPDH in tumorigenesis and cancer progression, as well as the development of IMPDH inhibitors with selective actions on GTP synthesis, have prompted a reappraisal of targeting this enzyme for anti-cancer treatment. In this review, we summarize the history of IMPDH inhibitors, the development of new inhibitors as anti-cancer drugs, and future directions and strategies to overcome existing challenges.
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- 2019
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33. Identification of lysine methylation in the core GTPase domain by GoMADScan
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Akshiv Malhotra, Guowei Yin, Emily Rose Kahoud, Jaskirat Randhawa, Konstantin I. Popov, Shigeki Iwase, Kara Wolfe, Nazanin Majd, Risa Kawaguchi, Yoshiki Ikeda, Hirofumi Yoshino, Hiroko Shimada, Kaori Kofuji, Sharon L. Campbell, Sasson Haviv, Mika Sasaki, John M. Asara, Atsuo T. Sasaki, Koichi Okumura, Satoshi Kofuji, and Brenda Temple
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0301 basic medicine ,Hydrolases ,Lysine ,GTPase ,Molecular Dynamics ,Biochemistry ,Database and Informatics Methods ,Computational Chemistry ,0302 clinical medicine ,Protein structure ,Ubiquitin ,Biochemical Simulations ,Amino Acids ,Post-Translational Modification ,Database Searching ,Multidisciplinary ,biology ,Organic Compounds ,Nucleotides ,Chemistry ,Chemical Reactions ,Acetylation ,Methylation ,Enzymes ,Cell biology ,030220 oncology & carcinogenesis ,Physical Sciences ,Medicine ,Basic Amino Acids ,Research Article ,Guanine ,Science ,Protein domain ,Research and Analysis Methods ,03 medical and health sciences ,Organic Chemistry ,Chemical Compounds ,Biology and Life Sciences ,Proteins ,Computational Biology ,Guanosine Triphosphatase ,030104 developmental biology ,Enzymology ,biology.protein ,Ras superfamily - Abstract
RAS is the founding member of a superfamily of GTPases and regulates signaling pathways involved in cellular growth control. While recent studies have shown that the activation state of RAS can be controlled by lysine ubiquitylation and acetylation, the existence of lysine methylation of the RAS superfamily GTPases remains unexplored. In contrast to acetylation, methylation does not alter the side chain charge and it has been challenging to deduce its impact on protein structure by conventional amino acid substitutions. Herein, we investigate lysine methylation on RAS and RAS-related GTPases. We developed GoMADScan (Go language-based Modification Associated Database Scanner), a new user-friendly application that scans and extracts posttranslationally modified peptides from databases. The GoMADScan search on PhosphoSitePlus databases identified methylation of conserved lysine residues in the core GTPase domain of RAS superfamily GTPases, including residues corresponding to RAS Lys-5, Lys-16, and Lys-117. To follow up on these observations, we immunoprecipitated endogenous RAS from HEK293T cells, conducted mass spectrometric analysis and found that RAS residues, Lys-5 and Lys-147, undergo dimethylation and monomethylation, respectively. Since mutations of Lys-5 have been found in cancers and RASopathies, we set up molecular dynamics (MD) simulations to assess the putative impact of Lys-5 dimethylation on RAS structure. Results from our MD analyses predict that dimethylation of Lys-5 does not significantly alter RAS conformation, suggesting that Lys-5 methylation may alter existing protein interactions or create a docking site to foster new interactions. Taken together, our findings uncover the existence of lysine methylation as a novel posttranslational modification associated with RAS and the RAS superfamily GTPases, and putative impact of Lys-5 dimethylation on RAS structure.
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- 2019
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34. The In Vitro Effect of Acidic-Pepsin on Nuclear Factor KappaB Activation and Its Related Oncogenic Effect on Normal Human Hypopharyngeal Cells
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Clarence T. Sasaki, Julia Toman, and Dimitra P. Vageli
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Keratinocytes ,0301 basic medicine ,Esophageal Neoplasms ,Hydrolases ,Carcinogenesis ,lcsh:Medicine ,medicine.disease_cause ,Biochemistry ,Epithelium ,Spectrum Analysis Techniques ,0302 clinical medicine ,Pepsins ,Pepsin ,Animal Cells ,Medicine and Health Sciences ,Electrochemistry ,Bile ,Phosphorylation ,STAT3 ,lcsh:Science ,Cellular localization ,Fluorescence-Activated Cell Sorting ,Multidisciplinary ,biology ,Chemistry ,Hydrogen-Ion Concentration ,Flow Cytometry ,Enzymes ,Blot ,Phenotype ,Oncology ,Spectrophotometry ,030220 oncology & carcinogenesis ,Physical Sciences ,Tumor necrosis factor alpha ,Cytophotometry ,Cellular Types ,Anatomy ,Oxidoreductases ,Luciferase ,Research Article ,Signal Transduction ,Cell Survival ,Specimen Preservation ,DNA transcription ,Research and Analysis Methods ,03 medical and health sciences ,Primary Cells ,Genetics ,medicine ,Humans ,Cell Proliferation ,Inflammation ,Tumor Necrosis Factor-alpha ,Cell growth ,Pepsin Treatment ,Carcinoma ,lcsh:R ,Transcription Factor RelA ,Biology and Life Sciences ,Proteins ,Epithelial Cells ,Cell Biology ,Molecular biology ,Pepsin A ,In vitro ,Post-Fixation ,Hypopharynx ,Biological Tissue ,Electrochemical Cells ,030104 developmental biology ,Microscopy, Fluorescence ,Specimen Preparation and Treatment ,Immunology ,Enzymology ,biology.protein ,lcsh:Q ,Gene expression ,Precancerous Conditions - Abstract
Background Extra-esophageal carcinogenesis has been widely discussed in relation to the chronic effects of laryngopharyngeal reflux and most prominently with pepsin historically central to this discussion. With refluxate known to include gastric (pepsin) and duodenal (bile) fluids, we recently demonstrated the mechanistic role of NF-κB in mediating the preneoplastic effects of acidic-bile. However, the role of pepsin in promoting hypopharyngeal premalignant events remains historically unclear. Here, we investigate the in vitro effect of acidic-pepsin on the NF-κB oncogenic pathway to better define its potential role in hypopharyngeal neoplasia. Methods Human hypopharyngeal primary cells (HHPC) and keratinocytes (HHK) were repetitively exposed to physiologic pepsin concentrations (0.1 mg/ml) at pH 4.0, 5.0 and 7.0. Cellular localization of phospho-NF-κB and bcl-2 was determined using immunofluorescence and western blotting. NF-κB transcriptional activity was tested by luc reporter and qPCR. Analysis of DNA content of pepsin treated HHK and HHPC was performed using Fluorescence-activated-cell sorting assay. To explore a possible dose related effect, pepsin concentration was reduced from 0.1 to 0.05 and 0.01 mg/ml. Results At physiologic concentration, acidic-pepsin (0.1 mg/ml at pH 4.0) is lethal to most normal hypopharyngeal cells. However, in surviving cells, no NF-κB transcriptional activity is noted. Acidic-pepsin fails to activate the NF-κB or bcl-2, TNF-α, EGFR, STAT3, and wnt5α but increases the Tp53 mRNAs, in both HHPC and HHK. Weakly acidic-pepsin (pH 5.0) and neutral-pepsin (pH 7.0) induce mild activation of NF-κB with increase in TNF-α mRNAs, without oncogenic transcriptional activity. Lower concentrations of pepsin at varying pH do not produce NF-κB activity or transcriptional activation of the analyzed genes. Conclusion Our findings in vitro do not support the role of acidic-pepsin in NF-κB related hypopharyngeal carcinogenesis.
- Published
- 2016
35. Method for Assaying the Lipid Kinase Phosphatidylinositol-5-phosphate 4-kinase α in Quantitative High-Throughput Screening (qHTS) Bioluminescent Format
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Mindy I. Davis, Anton Simeonov, and Atsuo T. Sasaki
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0301 basic medicine ,High-throughput screening ,Biology ,Phosphatidylinositols ,Article ,Substrate Specificity ,03 medical and health sciences ,chemistry.chemical_compound ,Adenosine Triphosphate ,High-Throughput Screening Assays ,Humans ,Luciferase ,Phosphatidylinositol ,Phosphorylation ,Phosphatidylinositol 5-phosphate ,Kinase ,Cell biology ,Phosphotransferases (Alcohol Group Acceptor) ,030104 developmental biology ,chemistry ,Biochemistry ,Luminescent Measurements ,lipids (amino acids, peptides, and proteins) ,Adenosine triphosphate - Abstract
Lipid kinases are important regulators of a variety of cellular processes and their dysregulation causes diseases such as cancer and metabolic diseases. Distinct lipid kinases regulate the seven different phosphorylated forms of phosphatidylinositol (PtdIns). Some lipid kinases utilize long-chain lipid substrates that have limited solubility in aqueous solutions, which can lead to difficulties in developing a robust and miniaturizable biochemical assay. The ability to prepare the lipid substrate and develop assays to identify modulators of lipid kinases is important and is the focus of this methods chapter. Herein, we describe a method to prepare a DMSO-based lipid mixture that enables the 1536-well screening of the lipid kinase phosphatidylinositol-5-phosphate 4-kinase α (PI5P4Kα) utilizing the D-myo-di16-PtIns(5)P substrate in quantitative high-throughput screening (qHTS) format using the ADP-Glo™ technology to couple the production of ADP to a bioluminescent readout.
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- 2016
36. The Brain Mechanisms Underlying the Perception of Pungent Taste of Capsaicin and the Subsequent Autonomic Responses
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Shinpei eKawakami, Hajime eSato, Akihiro T Sasaki, Hiroki C Tanabe, Yumiko eYoshida, Mitsuru eSaito, Hiroki eToyoda, Norihiro eSadato, and Youngnam eKang
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0301 basic medicine ,medicine.medical_specialty ,Taste ,Stimulation ,Insular cortex ,capsaicin ,lcsh:RC321-571 ,03 medical and health sciences ,Behavioral Neuroscience ,chemistry.chemical_compound ,0302 clinical medicine ,Gyrus ,Internal medicine ,mental disorders ,medicine ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Biological Psychiatry ,Original Research ,fMRI ,taste recognition ,Psychiatry and Mental health ,030104 developmental biology ,Neuropsychology and Physiological Psychology ,medicine.anatomical_structure ,Endocrinology ,Neurology ,chemistry ,Hypothalamus ,Capsaicin ,insular cortex ,Reflex ,autonomic function ,Psychology ,Neuroscience ,Insula ,030217 neurology & neurosurgery ,psychological phenomena and processes - Abstract
In a human fMRI study, it has been demonstrated that tasting and ingesting capsaicin activate the ventral part of the middle and posterior short gyri (M/PSG) of the insula which is known as the primary gustatory area, suggesting that capsaicin is recognized as a taste. Tasting and digesting spicy foods containing capsaicin induce various physiological responses such as perspiration from face, salivation and facilitation of cardiovascular activity, which are thought to be caused through viscero-visceral autonomic reflexes. However, this does not necessarily exclude the possibility of the involvement of higher-order sensory-motor integration between the M/PSG and anterior short gyrus (ASG) known as the autonomic region of the insula. To reveal a possible functional coordination between the M/PSG and ASG, we here addressed whether capsaicin increases neural activity in the ASG as well as the M/PSG using fMRI and a custom-made taste delivery system. Twenty subjects participated in this study, and three tastant solutions: capsaicin, NaCl and artificial saliva (AS) were used. Group analyses with the regions activated by capsaicin revealed significant activations in the bilateral ASG and M/PSG. The fMRI blood oxygenation level-dependent (BOLD) signals in response to capsaicin stimulation were significantly higher in ASG than in M/PSG regardless of the side. Concomitantly, capsaicin increased the fingertip temperature significantly. Although there was no significant correlation between the fingertip temperatures and BOLD signals in the ASG or M/PSG when the contrast [Capsaicin–AS] or [Capsaicin–NaCl] was computed, a significant correlation was found in the bilateral ASG when the contrast [2×Capsaicin–NaCl–AS] was computed. In contrast, there was a significant correlation in the hypothalamus regardless of the contrasts. Furthermore, there was a significant correlation between M/PSG and ASG. These results indicate that capsaicin increases neural activity in the ASG as well as the M/PSG, suggesting that the neural coordination between the two cortical areas may be involved in autonomic responses to tasting spicy foods as reflected in fingertip temperature increases.
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- 2016
37. Twelve oxo-eicosatetraenoic acid induces fetal membrane release after delivery in cows
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T. Tanigawa, Y. Takayama, S. Kawamoto, M. Murai, T. Sasaki, M. Itoh, Y. Ueda, K. Takahashi, Y. Matsui, M. Hayashi, K. Kai, M. Sutoh, Hiroya Kadokawa, Y. Sakurai, M. Nakamura, and H. Kamada
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medicine.medical_specialty ,Eicosatetraenoic acid ,Cell ,Extraembryonic Membranes ,Prostaglandin ,Arachidonic Acids ,Biology ,Arachidonate 12-Lipoxygenase ,Dexamethasone ,chemistry.chemical_compound ,Pregnancy ,Fetal membrane ,Internal medicine ,medicine ,Animals ,Fibroblast ,Cells, Cultured ,Fetus ,Obstetrics and Gynecology ,medicine.anatomical_structure ,Endocrinology ,Reproductive Medicine ,chemistry ,Cell culture ,Prostaglandins ,Cattle ,Female ,Arachidonic acid ,Placenta, Retained ,Developmental Biology - Abstract
Fetal fibroblast cell culture from cotyledons of bovine placenta and animal experiments close to term were used to elucidate afterbirth release and factors missing in the signal transduction mechanism for retained fetal membranes (RFM) after delivery. In cell culture the addition of arachidonic acid (Ara) to the medium caused rapid release to free floating cell in the culture dish, accompanied by matrix metalloproteinase (MMP) activation, being consistent with previous in vivo observations, where a relation between MMP and fetal membrane release had been shown. Ara-induced cell floating was not inhibited by the addition of cyclooxygenase (COX) inhibitor, and not induced by the addition of PGF2α or PGE2 to replace Ara, while 12-lipoxygenase (12-LOX) metabolite of Ara, 12-oxo-eicosatetraenoic acid (12-oxoETE), strongly induced cell floating. In the animal experiments, 12-oxoETE injection to delivery-induced cows (n = 6) using prostaglandin (PG) and dexamethazone resulted in rapid release of fetal membranes. In cows with natural calf delivery, a 12-oxoETE peak (11.7-16.8 ng/ml) was observed in maternal blood plasma prior to release of fetal membranes. This investigation thus gives new indications for that the mediator for fetal membrane release is 12-oxoETE and not PG.
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- 2012
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38. 3DAP/TEM Study of Precipitation Hardened Magnesium Alloys
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K. Hono, T. Ohkubo, and T T Sasaki
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010302 applied physics ,Materials science ,Precipitation hardening ,chemistry ,Magnesium ,0103 physical sciences ,Metallurgy ,chemistry.chemical_element ,02 engineering and technology ,021001 nanoscience & nanotechnology ,0210 nano-technology ,01 natural sciences ,Instrumentation - Published
- 2017
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39. Inhibition of Pyruvate Kinase M2 by Reactive Oxygen Species Contributes to Cellular Antioxidant Responses
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Dimitrios Anastasiou, Min Shen, Jian-kang Jiang, Atsuo T. Sasaki, Craig J. Thomas, Gary Bellinger, Lewis C. Cantley, Jason W. Locasale, John M. Asara, Douglas S. Auld, Matthew B. Boxer, Matthew G. Vander Heiden, George Poulogiannis, Massachusetts Institute of Technology. Department of Biology, Koch Institute for Integrative Cancer Research at MIT, Vander Heiden, Matthew G., and Bellinger, Gary
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Cell Survival ,Pyruvate Kinase ,Transplantation, Heterologous ,Enzyme Activators ,Mice, Nude ,PKM2 ,Pentose phosphate pathway ,Biology ,medicine.disease_cause ,Antioxidants ,Cell Line ,Pentose Phosphate Pathway ,Mice ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Glycolysis ,Cysteine ,Diamide ,chemistry.chemical_classification ,Reactive oxygen species ,Multidisciplinary ,Neoplasms, Experimental ,Glutathione ,Acetylcysteine ,Oxidative Stress ,Protein Subunits ,Glucose ,Amino Acid Substitution ,chemistry ,Biochemistry ,Cancer cell ,Mutant Proteins ,Reactive Oxygen Species ,Oxidation-Reduction ,Neoplasm Transplantation ,Pyruvate kinase ,Oxidative stress ,Intracellular - Abstract
Control of intracellular reactive oxygen species (ROS) concentrations is critical for cancer cell survival. We show that, in human lung cancer cells, acute increases in intracellular concentrations of ROS caused inhibition of the glycolytic enzyme pyruvate kinase M2 (PKM2) through oxidation of Cys[superscript 358]. This inhibition of PKM2 is required to divert glucose flux into the pentose phosphate pathway and thereby generate sufficient reducing potential for detoxification of ROS. Lung cancer cells in which endogenous PKM2 was replaced with the Cys[superscript 358] to Ser[superscript 358] oxidation-resistant mutant exhibited increased sensitivity to oxidative stress and impaired tumor formation in a xenograft model. Besides promoting metabolic changes required for proliferation, the regulatory properties of PKM2 may confer an additional advantage to cancer cells by allowing them to withstand oxidative stress., National Institutes of Health (U.S.) (R03MH085679), National Institutes of Health (U.S.) (1P30CA147882), Burroughs Wellcome Fund, Damon Runyon Cancer Research Foundation, Smith Family Foundation, Starr Cancer Consortium
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- 2011
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40. Mechanism of Contact Resistance Reduction in Nickel Silicide Films by Pt Incorporation
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Takeshi Sonehara, Akira Hokazono, Hiroshi Uchida, Yoshiaki Toyoshima, Satoshi Inaba, Mitsuhiro Tomita, H. Akutsu, Shigeru Kawanaka, and T. Sasaki
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Materials science ,Dopant ,Metallurgy ,Contact resistance ,Doping ,chemistry.chemical_element ,Atom probe ,Electronic, Optical and Magnetic Materials ,law.invention ,chemistry.chemical_compound ,Chemical engineering ,chemistry ,law ,Silicide ,Grain boundary ,Electrical and Electronic Engineering ,Platinum ,Sheet resistance - Abstract
Platinum (Pt) incorporation into nickel silicide (NiSi) films improves silicide characteristics such as lower contact resistance RC at silicide/Si interface and higher thermal stability. The impact of Pt incorporation is widely accepted and recognized in research field; however, the role of Pt in NiSi films has not been fully clarified so far. In this paper, the spatial distributions of Pt and dopants (i.e., arsenic and boron) in silicide films are studied at an atomic level analysis using local electrode atom probe. In particular, Pt and dopant distributions were investigated in detail both at silicide/Si interface and at silicide-grain boundary. Silicide-grain size was also analyzed at various Pt concentrations in silicide films, and the relationship between the Pt concentration and physical properties of Ni1-xPtxSi films is pointed out. Finally, for further CMOS device scaling, the benefit of higher concentration of Pt incorporation into Ni1-xPtxSi films is described.
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- 2011
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41. A Fluorescent Reporter of AMPK Activity and Cellular Energy Stress
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Chia-Hsien Hsu, Lewis C. Cantley, Peiling Tsou, Atsuo T. Sasaki, and Bin Zheng
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Physiology ,Molecular Sequence Data ,chemistry.chemical_element ,Calcium-Calmodulin-Dependent Protein Kinase Kinase ,Calcium ,AMP-Activated Protein Kinases ,Protein Serine-Threonine Kinases ,7. Clean energy ,Article ,03 medical and health sciences ,0302 clinical medicine ,AMP-Activated Protein Kinase Kinases ,Cell Line, Tumor ,Fluorescence Resonance Energy Transfer ,Humans ,Amino Acid Sequence ,Phosphorylation ,Protein kinase A ,Molecular Biology ,030304 developmental biology ,Calcium metabolism ,0303 health sciences ,Kinase ,AMPK ,Cell Biology ,Microfluidic Analytical Techniques ,Cytosol ,Förster resonance energy transfer ,chemistry ,Biophysics ,Energy Metabolism ,030217 neurology & neurosurgery - Abstract
SummaryAMP-activated protein kinase (AMPK) is activated when the AMP/ATP ratio in cells is elevated due to energy stress. Here, we describe a biosensor, AMPKAR, that exhibits enhanced fluorescence resonance energy transfer (FRET) in response to phosphorylation by AMPK, allowing spatiotemporal monitoring of AMPK activity in single cells. We show that this reporter responds to a variety of stimuli that are known to induce energy stress and that the response is dependent on AMPK α1 and α2 and on the upstream kinase LKB1. Interestingly, we found that AMPK activation is confined to the cytosol in response to energy stress but can be observed in both the cytosol and nucleus in response to calcium elevation. Finally, using this probe with U2OS cells in a microfluidic device, we observed a very high cell-to-cell variability in the amplitude and time course of AMPK activation and recovery in response to pulses of glucose deprivation.
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- 2011
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42. Population pharmacokinetic analysis of meropenem in Japanese adult patients
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Takahiro Muro, N. Hosaka, T. Sasaki, Y. Umeda, Shun Higuchi, H. Yamamoto, Shinsuke Takemoto, Yoshiharu Karube, and Hidetoshi Kamimura
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Pharmacology ,Creatinine ,education.field_of_study ,medicine.medical_specialty ,business.industry ,Coefficient of variation ,Population ,Urology ,Renal function ,Meropenem ,Surgery ,NONMEM ,chemistry.chemical_compound ,chemistry ,Pharmacokinetics ,medicine ,Pharmacology (medical) ,education ,business ,medicine.drug ,Antibacterial agent - Abstract
Summary What is known and Objective: Meropenem is frequently employed as an empirical treatment for serious infections, but there has been no report on its population pharmacokinetic parameters for Japanese patients. Our aim is to undertake a population pharmacokinetic analysis of meropenem using non-linear mixed effects model (NONMEM). Methods: Data from 68 patients were analysed via NONMEM with the first-order method. The participants’ covariates, including gender, age, actual body weight, serum creatinine, serum albumin, serum total protein and creatinine clearance, were analyzed by the forward inclusion and backward elimination method to identify their potential influence on meropenem pharmacokinetics. The adequacy of the constructed model was assessed by goodness-of-fit plots and the precision of the parameter estimated at each step of the model development. To assess the robustness of the estimated parameter, bootstrap analysis was performed. Results and Discussion: The data were best described by a one-compartment model. The serum creatinine values modified by the below normal limit in our hospital (mSCR) were an influential covariate for clearance (CL): CL (L/h) = 11·1 × (mSCR/0·7)−1. The volume of distribution was estimated as 33·6 L. The coefficient of variation of the inter-individual variability of CL and the residual variability were 52·1% and 0·827% μg/mL, respectively. A comparison of the population pharmacokinetic parameters of meropenem in the final model estimated in NONMEM with original data, and 1000 bootstrap samples shows that both sets of estimates were comparable, thereby indicating the robustness of the proposed model. What is new and Conclusion: A population pharmacokinetic model that satisfactorily described the disposition and variability of meropenem in our Japanese population is described. NONMEM analysis showed that the clearance of meropenem depended on modified serum creatinine. The results of this study should help Japanese patients on meropenem by improving the prediction accuracy of dosing using the Bayesian method.
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- 2011
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43. Nucleation and growth of α-Ti on TiB precipitates in Ti–15Mo–2.6Nb–3Al–0.2Si–0.12B
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G. B. Thompson, K. Torres, Jaimie Tiley, Balakrishna Cherukuri, B. Fu, T. T. Sasaki, and Raghavan Srinivasan
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Materials science ,Silicon ,Precipitation (chemistry) ,Alloy ,Metallurgy ,Nucleation ,chemistry.chemical_element ,Atom probe ,engineering.material ,Condensed Matter Physics ,Microstructure ,law.invention ,chemistry ,Chemical engineering ,law ,Transmission electron microscopy ,Phase (matter) ,engineering - Abstract
The microstructure was investigated of a β-stabilized Ti–15Mo–2.6Nb–3Al–0.2Si–0.12B alloy at two different aging temperatures, 540°C/8 h and 660°C/8 h. In particular, the heterogeneous nucleation of α-Ti from TiB particles was studied at these aging temperatures. At the lower aging temperature, α-Ti precipitated as needle-like shapes on the TiB phase. In contrast, the higher aged sample exhibited globular α-Ti morphology around the TiB phase. This difference was rationalized in terms of the coarsening behavior of α-Ti around the TiB phase. Various orientation relationships were observed between these two samples. This difference is because of the precipitation of α-Ti on two different TiB planes. In addition, atom probe analysis confirmed the segregation of alpha and beta stabilizing elements to the respective phases. At the lower aging temperature, it was noted that silicon enriched the α-Ti/β-Ti interface when the α-Ti/β-Ti/TiB were all in contact. Upon α-Ti coarsening, silicon enrichment was observed a...
- Published
- 2011
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44. Structure-based integrated approach for analysis of the GTP metabolism
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Atsuo T. Sasaki, Koh Takeuchi, and Toshiya Senda
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Inorganic Chemistry ,GTP metabolism ,Structural Biology ,Chemistry ,Structure based ,General Materials Science ,Computational biology ,Physical and Theoretical Chemistry ,Integrated approach ,Condensed Matter Physics ,Biochemistry - Published
- 2018
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45. Growth of GaN crystals by Na flux LPE method
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Naoya Miyoshi, Fumio Kawamura, T. Sasaki, Mamoru Imade, Masashi Yoshimura, Yasuo Kitaoka, and Yusuke Mori
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Flux method ,Materials science ,Fabrication ,business.industry ,Doping ,Nucleation ,Physics::Optics ,Flux ,Mineralogy ,Gallium nitride ,Surfaces and Interfaces ,Substrate (electronics) ,Condensed Matter Physics ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Crystal ,Condensed Matter::Materials Science ,chemistry.chemical_compound ,chemistry ,Materials Chemistry ,Optoelectronics ,Electrical and Electronic Engineering ,business - Abstract
High-quality and low-cost bulk crystals are needed in the field of group III nitride semiconductors in order to develop optical and electrical devices. Controlling the nucleation phenomenon and solution condition during growth is important for growth of bulk GaN crystal by the Na flux method. The carbon doping into the solution and the forced induction of solution flow are effective to control them. We also present some attempts for improving the quality of seed substrate for fabrication of boule-sized bulk GaN crystals.
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- 2010
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46. R-2HG Exhibits Anti-tumor Activity by Targeting FTO/m6A/MYC/CEBPA Signaling
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Mark Wunderlich, Dongling Zou, Huilin Huang, David R. Plas, Jun Qi, Jennifer R. Skibbe, Kangkang Yu, Minjie Wei, Jie Jin, Rui Su, Xi Qin, Hengyou Weng, Mengxia Yu, James E. Bradner, Ying Qing, James C. Mulloy, Yungui Wang, Jianjun Chen, Atsuo T. Sasaki, Bin Zhang, Tong Wu, Xiaolan Deng, Guido Marcucci, Chao Hu, Chenying Li, Qing Dai, Sigrid Nachtergaele, Kyle Ferchen, Lei Dong, Xi Jiang, Chuan He, and Xiaocheng Weng
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0301 basic medicine ,Cell growth ,Mutant ,Biology ,medicine.disease ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,chemistry.chemical_compound ,Leukemia ,030104 developmental biology ,Isocitrate dehydrogenase ,chemistry ,Apoptosis ,CEBPA ,Cancer cell ,medicine ,Cancer research ,N6-Methyladenosine - Abstract
Summary R-2-hydroxyglutarate (R-2HG), produced at high levels by mutant isocitrate dehydrogenase 1/2 (IDH1/2) enzymes, was reported as an oncometabolite. We show here that R-2HG also exerts a broad anti-leukemic activity in vitro and in vivo by inhibiting leukemia cell proliferation/viability and by promoting cell-cycle arrest and apoptosis. Mechanistically, R-2HG inhibits fat mass and obesity-associated protein (FTO) activity, thereby increasing global N 6 -methyladenosine (m 6 A) RNA modification in R-2HG-sensitive leukemia cells, which in turn decreases the stability of MYC/CEBPA transcripts, leading to the suppression of relevant pathways. Ectopically expressed mutant IDH1 and S-2HG recapitulate the effects of R-2HG. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. Collectively, while R-2HG accumulated in IDH1/2 mutant cancers contributes to cancer initiation, our work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO -high cancer cells via targeting FTO/m 6 A/MYC/CEBPA signaling.
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- 2018
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47. Multi-Wavelength Raman and HRTEM Study of Ni/Si Interface after NiSi Formation at Low Temperatures using Various Heating Methods
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Woo Sik Yoo, Toshiyuki Isshiki, Masahiro Yoshimoto, Hiroshi Harima, Hiroaki Minami, and T. Sasaki
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Materials science ,Annealing (metallurgy) ,Analytical chemistry ,Metal ,symbols.namesake ,chemistry.chemical_compound ,chemistry ,Transmission electron microscopy ,visual_art ,Silicide ,symbols ,visual_art.visual_art_medium ,Wafer ,High-resolution transmission electron microscopy ,Raman spectroscopy ,Raman scattering - Abstract
Low-temperature formation processes of Ni silicide were studied by Raman scattering and cross-sectional transmission electron microscopy (TEM) using Si wafer samples deposited with thin Ni layers. Comparisons were made between two annealing methods; lamp based rapid thermal process (lamp RTP) and a hot wall chamber RTP system. The TEM and Raman observations showed good agreement on the Ni silicidation scheme at the Ni/Si interface. It is shown that Raman scattering spectroscopy is a convenient, non-contact and non-destructive characterization tool to probe and investigate the Ni-silicide formation process in the top nm-order surface of metal/Si contact.
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- 2008
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48. Investigations on Scattering Centers in CsB3O5 Crystals
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T. Sasaki, D. Rajesh, Ramasamy Jayavel, H. Shimatani, M. Yoshimura, and Yusuke Mori
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Quenching ,Scattering ,business.industry ,Physics::Optics ,chemistry.chemical_element ,General Chemistry ,Condensed Matter Physics ,Nonlinear optical crystal ,Molecular physics ,Crystal ,Optics ,chemistry ,Caesium ,General Materials Science ,business ,Solid solution - Abstract
Cesium triborate (CsB3O5: CBO) crystal is an important nonlinear optical crystal for UV light generation. Although the crystals contain scattering centers, postgrowth quenching of the crystals is successful in reducing the scattering centers. After in-depth experimental analysis of the quenching process we propose the existence of retrograde solid solution region at high temperatures in CBO. Based on the retrograde solid solution curve we are able to reduce the scattering centers in CBO crystals by the vapor transport equilibration process. By our hypothesis we are able to explain the experimental results and mechanism of formation of scattering centers in CBO crystals.
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- 2008
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49. New developments in crystal growth from solutions: Oxides, proteins, and nitrides
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T. Sasaki, Fumio Kawamura, Yasuo Kitaoka, Masashi Yoshimura, and Yusuke Mori
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Chemistry ,Nucleation ,Crystal growth ,Gallium nitride ,Nitride ,Condensed Matter Physics ,Epitaxy ,Inorganic Chemistry ,Crystal ,Crystallography ,chemistry.chemical_compound ,Chemical engineering ,Materials Chemistry ,Protein crystallization ,Macromolecule - Abstract
Controlling the nucleation and growth processes is important for growing large, high-quality crystals of oxides, proteins, and nitrides from a solution. We must understand how the solution conditions should be controlled, and determine a universal principle that is applicable to the growth of various high-quality crystals. In this report, we will present the effects of solution stirring and nucleation control on the solution growth of CsLiB 6 O 10 (CLBO), proteins, and GaN crystals with respect to the following issues: (1) effect of solution stirring on the growth of high-quality CLBO crystals, (2) high-quality protein crystal growth by means of forced nucleation induced by laser irradiation and the solution-stirring method, and (3) high-quality 2-in GaN crystal by Na flux liquid-phase epitaxy method.
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- 2008
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50. Global analysis of GaN growth using a solution technique
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D. Kashiwagi, T. Sasaki, Ryohei Gejo, Yoshihiro Kangawa, Lijun Liu, Fumio Kawamura, Koichi Kakimoto, and Yusuke Mori
- Subjects
Convection ,Natural convection ,Chemistry ,Mineralogy ,Crucible ,Gallium nitride ,Condensed Matter Physics ,Inorganic Chemistry ,Crystal ,chemistry.chemical_compound ,Mass transfer ,Materials Chemistry ,Radiative transfer ,Composite material ,Muffle furnace - Abstract
The solution growth technique is one of the key methods for fabricating gallium nitride (GaN) wafers with small dislocation density. Since the growth rate of GaN using the solution technique is small, the key issue of the technique is to enhance the growth rate of the crystal. We studied how nitrogen is transferred from the surface of the flux to the interface between the top of the flux and the crystal in a muffle furnace using a global model that includes radiative, convective and conductive heat and mass transfer, including nitrogen transfer. The average growth rate of GaN increased when the temperature difference between the furnace wall and a crucible wall became large. This phenomenon is based on mixing of the flux due to natural convection.
- Published
- 2008
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