2,817 results on '"Photosynthetic bacteria"'
Search Results
2. Persistent luminescence phosphor as in-vivo light source for tumoral cyanobacterial photosynthetic oxygenation and photodynamic therapy
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Meiqi Chang, Li Ding, Caihong Dong, Hongguang Zhang, Jianlin Shi, Yu Chen, and Wei Feng
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Persistent luminescence ,QH301-705.5 ,medicine.medical_treatment ,Biomedical Engineering ,Photodynamic therapy ,Cyanobacteria ,Article ,Biomaterials ,chemistry.chemical_compound ,In vivo ,medicine ,Biology (General) ,Materials of engineering and construction. Mechanics of materials ,Tumor hypoxia ,Singlet oxygen ,Irradiation-free ,Tumor Oxygenation ,Verteporfin ,chemistry ,Oxygenation ,Biophysics ,TA401-492 ,Photosynthetic bacteria ,Biotechnology ,medicine.drug - Abstract
Tumor oxygenation level has been regarded as an attractive target to elevate the efficiency of photodynamic therapy (PDT). Cyanobacterial photosynthesis-mediated reversal of tumor hypoxia could enable an oxygen-boosted PDT, but is limited by scant penetration depth and efficiency of external light. Herein, aiming at the dual purposes of reducing biological toxicity induced by long-term light irradiation and alleviating hypoxia, we here introduce a novel-designed CaAl2O4:Eu,Nd blue persistent luminescence material (PLM) as the in vivo light source after pre-excited in vitro. The ingenious construction of blue-emitting PLM with “optical battery” characteristics activates cyanobacterial cells and verteporfin simultaneously, which performs the successive oxygen supply and singlet oxygen generation without the long-term external excitation, resulting in the modulated tumor hypoxic microenvironment and enhanced photodynamic tumor proliferation inhibition efficiency. Both in vitro cellular assessment and in vivo tumor evaluation results affirm the advantages of self-produced oxygen PDT system and evidence the notable antineoplastic outcome. This work develops an irradiation-free photosynthetic bacteria-based PDT platform for the optimization of both oxygen production capacity and light utilization efficiency in cancer treatment, which is expected to promote the clinical progress of microbial-based photonic therapy., Graphical abstract A distinct exogenous “irradiation-free” cyanobacteria-based PDT platform is rationally engineered for ameliorating the tumor hypoxic microenvironment and achieving the successive singlet oxygen (1O2) generation without the need of exogenous light excitation, which provides a specific paradigm of microbial-based nanotherapy with the assistance of rational design, engineering and integration of persistent luminescence phosphors as the desirable light irradiation source.Image 1, Highlights • Construction of CaAl2O4:Eu,Nd PLM to generate 1O2 without the aid of exogenous light excitation. • Cyanobacteria with light-triggered oxygenation effect were employed for the normalization of tumor microenvironment. • A distinct exogenous “irradiation-free” cyanobacteria-based PDT platform was rationally engineered.
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- 2022
3. Light-driven proton transport across liposomal membranes enabled by Janus metal-organic layers
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Zhiye Wang, Jieyu Zhu, Yuan Gao, Liulin Yang, Huihui Hu, Lingyun Cao, Cheng Wang, and Wenbin Lin
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Liposome ,ATP synthase ,biology ,Chemistry ,General Chemical Engineering ,Biochemistry (medical) ,General Chemistry ,Photochemistry ,Biochemistry ,Redox ,Membrane ,Proton transport ,Materials Chemistry ,biology.protein ,Environmental Chemistry ,Photosynthetic bacteria ,Lipid bilayer ,Electrochemical gradient - Abstract
Summary Photo-generation of a proton gradient over a lipid bilayer is of interest due to its essential role in photosynthetic bacteria. Membrane asymmetry is key to the proton gradient generation via directional proton transport. Here, we report a light-driven proton pump based on two-dimensional, porphyrin-based Janus metal-organic layers (Janus-MOLs). The Janus-MOL, functionalized with carboxyquinone on one side and Acitretin on the other via a microemulsion-based method, was attached to liposome surface. Upon photoexcitation, the porphyrins initiate electron and hole transfers to carboxyquinone and Acitretin, respectively, which undergo redox reactions with freely diffusing quinone (Q)/hydrosemiquinone (HQ·) in the lipid bilayer to produce a concentration gradient of quinone-based species. Owing to different pKa values of HQ+ and HQ·, these redox reactions trigger proton transport across the membrane to create a pH gradient, which drives ATP production by CFoF1-ATP synthase in a similar fashion as photosynthetic bacteria.
- Published
- 2022
4. Structure, Function and Reconstitution of Antenna Complexes from Green Photosynthetic Bacteria
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Blankenship, Robert
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- 2005
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5. Use of effective microorganisms to enhance cost-effective biogas purification at the household level
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Mbuligwe E. Stephen, Mgana M. Shaaban, and Selele Minza
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Biogas ,biology ,Chemistry ,Microorganism ,Composition (visual arts) ,General Medicine ,Photosynthetic bacteria ,Rhodopseudomonas palustris ,Digestion ,biology.organism_classification ,Pulp and paper industry - Abstract
This study investigated the use of effective microorganisms (EM) to enhance cost-effective biogas purification at household-level application. It involved experimental setups for biogas purification in two different runs: 4 L activated EM and 1 L dormant EM by bubbling biogas through EM purification units. Biogas composition was analyzed using an industry-standard biogas analyzer. The results indicated that EM has the potential for biogas purification through a biological process, to remove H2S and CO2 by involving photosynthetic bacteria (Rhodopseudomonas palustris) in the presence of light. The raw biogas average composition was 62.2% CH4, 37.4% CO2 and 1359.3 ppm H2S. The 4L activated EM batch solution purified the raw biogas to 80.2% CH4, 19.5% CO2 and 786.1 ppm H2S. The corresponding purification efficiencies are 60% for CO2 and 49% for H2S. Purified biogas could be used by the household to cook for 1.82 h (85%) while raw biogas could cover only 55%. The designed biogas purification system can cost only Tshs 91,010/= and purify about 15,000 L of biogas at EM cost of Tshs 9,100/month. Key words: Biogas composition, photosynthetic bacteria, anaerobic digestion, biochemical processes, Rhodopseudomonas palustris, biological desulphurization.
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- 2021
6. DMSO formula for chlorophyll determination in dinoflagellates (Chl a + c2)
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Vipawee Dummee, Raymond J. Ritchie, and Suhailar Sma-Air
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Cyanobacteria ,Aqueous solution ,biology ,Plant Science ,Aquatic Science ,biology.organism_classification ,Anoxygenic photosynthesis ,chemistry.chemical_compound ,chemistry ,Zooxanthellae ,Chlorophyll ,Acetone ,Bacteriochlorophyll ,Photosynthetic bacteria ,Nuclear chemistry - Abstract
Zooxanthellae of corals, soft corals, and molluscs are endosymbiont dinoflagellates. Free-living dinoflagellates are also common in aquatic environments. Although aqueous 90% acetone and 100% acetone are excellent spectroscopic solvents, they are frequently unsatisfactory for quantitative solvent extraction of chlorophylls. In other studies, our laboratory has shown that dimethyl sulfoxamine (DMSO) is an excellent extractant for chlorophylls and bacteriochlorophylls from cyanobacteria (Chl a), chlorophytes (Chl a + b), diatoms (Chl a + c1c2), Acaryochloris (Chl d + a), and anoxygenic photosynthetic bacteria (Rhodopseudomonas) and have published algorithms for DMSO solvent. However, most endosymbiont dinoflagellates contain Chl a + c2. The soft coral, Sarcophyton sp., grown in an aquaculture outdoor aquarium and field material was used as source material. Here, we present DMSO Chl a + c2 spectrophotometric algorithms, describe their development for Chl a + c2, and calibrate them against the standard 90% acetone algorithms. The DMSO algorithms correlate very well (r > 0.989) with Chl assays based on 90% acetone. The soft coral had a Chl c2/a ratio of ≈ 0.3 to 0.6 but the zooxanthellae that actually grew in culture had a Chl c2/a ratio of ≈ 0.18; however, this difference had no significant effect on the chlorophyll algorithms.
- Published
- 2021
7. Enhancing Hydrogen Productivity of Photosynthetic Bacteria from the Formulated Carbon Source by Mixing Xylose with Glucose
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Yixiao Ma, Shuaishuai Ma, Guihong Wang, Hao Huang, Chuan Zhang, and Zhaoran Li
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Xylose ,Hydrogen ,Biomass ,chemistry.chemical_element ,Bioengineering ,General Medicine ,Applied Microbiology and Biotechnology ,Biochemistry ,Rhodopseudomonas ,chemistry.chemical_compound ,Light intensity ,Glucose ,Chemical engineering ,chemistry ,Bioreactor ,Biohydrogen ,Photosynthetic bacteria ,Photosynthesis ,Molecular Biology ,Carbon ,Biotechnology - Abstract
To develop an efficient photofermentative process capable of higher rate biohydrogen production using carbon components of lignocellulosic hydrolysate, a desired carbon substrate by mixing xylose with glucose was formulated. Effects of crucial process parameters affecting cellular biochemical reaction of hydrogen by photosynthetic bacteria (PSB), i.e., variation in initial concentration of total carbon, glucose content in initial carbon substrate, and light intensity, were experimentally investigated using response surface methodology (RSM) with a Box-Behnken design (BBD). Hydrogen production rate (HPR) in the maximum value of 30.6 mL h−1 L−1 was attained under conditions of 39 mM initial concentration of total carbon, 59% (mol/mol) glucose content in initial carbon substrate, and 12.6 W m−2 light intensity at light wavelength of 590 nm. Synergic effects of metabolizing such a well-formulated carbon substrate for sustaining the active microbial synthesis to sufficiently accumulate biomass in bioreactor, as well as stimulating enzyme activity of nitrogenase for the higher rate biohydrogen production, were attributed to this carbon substrate that can enable PSB to maintain the relatively consistent microenvironment in suitable culture pH condition during the optimized photofermentative process.
- Published
- 2021
8. CHLOROPHIL ACTIVITY TEST OF SOME TYPES OF VEGETABLES AS AN ANTIBACTERY FOR Escherichia coli AND Staphylococcus aureus
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Munira Munira, Muhammad Nasir, and Novi Yanti
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Antioxidant ,biology ,Chemistry ,medicine.medical_treatment ,food and beverages ,biology.organism_classification ,medicine.disease_cause ,chemistry.chemical_compound ,Horticulture ,Pigment ,Algae ,Staphylococcus aureus ,Chlorophyll ,visual_art ,medicine ,visual_art.visual_art_medium ,Spinach ,Photosynthetic bacteria ,Escherichia coli - Abstract
Background: Chlorophyll is a green color pigment in plants, algae and photosynthetic bacteria. The chlorophyll contained in the leaves has a function as an antioxidant, anti-inflammatory, and antibacterial. This study aims to determine the ability of chlorophyll from several types of vegetables to inhibit Escherichia coli and Staphylococcus aureus and determine the differences in the diameter of the inhibition zone between them. Methods: This study was a laboratory experimental study using a completely randomized design (CRD) divided into 4 treatments, namely aquadest (P0), cassava leaf chlorophyll (P1), kale leaf chlorophyll (P2), and spinach leaf chlorophyll (P3). 6 repetitions each. Microbiological tests were carried out using the well diffusion method. Results: Anova test showed that the chlorophyll extracts of cassava, kale and spinach were very influential (P = 0.000) in inhibiting the growth of Escherichia coli and Staphylococcus aureus. Duncan's further test showed that the largest average inhibition zone diameter for Escherichia coli was formed by cassava leaf chlorophyll (17.66 mm) and was significantly different from kale leaf chlorophyll (7 mm) and spinach leaves (6.16 mm). Similar to Staphylococcus aureus, the largest average inhibition zone diameter was also formed by cassava leaf chlorophyll, which was 18.16 mm and significantly different from kale leaf chlorophyll (6.75 mm) and spinach leaves (6.08 mm). Conclusion: The chlorophyll extract of cassava leaves, kale and spinach can inhibit the growth of Escherichia coli and Staphylococcus aureus with the largest inhibition zone diameter formed by the chlorophyll extract of cassava leaves.
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- 2021
9. Martin David Kamen (1913–2002): discoverer of carbon 14, and of new cytochromes in photosynthetic bacteria
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Govindjee Govindjee and Robert E. Blankenship
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Chemistry ,Plant physiology ,Cell Biology ,Plant Science ,General Medicine ,Metabolism ,Photosynthesis ,Biochemistry ,Anoxygenic photosynthesis ,Botany ,Nitrogen fixation ,Carbon-14 ,Photosynthetic bacteria ,Physical chemist - Abstract
Martin Kamen was a giant of twentieth century science. Trained as a physical chemist, he was the co-discoverer of radioactive Carbon 14, which has transformed many areas of science as a tracer and as a way to date artifacts. He later switched to the study of metabolism and biochemistry and made important contributions to the understanding of nitrogen fixation and photosynthesis. Finally, he studied cytochromes, primarily from anoxygenic photosynthetic bacteria.
- Published
- 2021
10. Single-Stage Operation of Hybrid Dark-Photo Fermentation to Enhance Biohydrogen Production through Regulation of System Redox Condition: Evaluation with Real-Field Wastewater
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Rashmi Chandra, G. N. Nikhil, and S. Venkata Mohan
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biohydrogen ,photosynthetic bacteria ,real-field wastewater ,dark-photo fermentation ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Harnessing hydrogen competently through wastewater treatment using a particular class of biocatalyst is indeed a challenging issue. Therefore, biohydrogen potential of real-field wastewater was evaluated by hybrid fermentative process in a single-stage process. The cumulative hydrogen production (CHP) was observed to be higher with distillery wastewater (271 mL) than with dairy wastewater (248 mL). Besides H2 production, the hybrid process was found to be effective in wastewater treatment. The chemical oxygen demand (COD) removal efficiency was found higher in distillery wastewater (56%) than in dairy wastewater (45%). Co-culturing photo-bacterial flora assisted in removal of volatile fatty acids (VFA) wherein 63% in distillery wastewater and 68% in case of dairy wastewater. Voltammograms illustrated dominant reduction current and low cathodic Tafel slopes supported H2 production. Overall, the augmented dark-photo fermentation system (ADPFS) showed better performance than the control dark fermentation system (DFS). This kind of holistic approach is explicitly viable for practical scale-up operation.
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- 2015
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11. Effect of light wavelength on hot spring microbial mat biodiversity.
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Nishida, Akifumi, Thiel, Vera, Nakagawa, Mayuko, Ayukawa, Shotaro, and Yamamura, Masayuki
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PHYSIOLOGICAL effects of light , *MICROBIAL mats , *HOT springs , *MICROBIAL diversity , *MICROBIAL communities , *PHOTOSYNTHETIC bacteria - Abstract
Hot spring associated phototrophic microbial mats are purely microbial communities, in which phototrophic bacteria function as primary producers and thus shape the community. The microbial mats at Nakabusa hot springs in Japan harbor diverse photosynthetic bacteria, mainly Thermosynechococcus, Chloroflexus, and Roseiflexus, which use light of different wavelength for energy conversion. The aim of this study was to investigate the effect of the phototrophs on biodiversity and community composition in hot spring microbial mats. For this, we specifically activated the different phototrophs by irradiating the mats with different wavelengths in situ. We used 625, 730, and 890 nm wavelength LEDs alone or in combination and confirmed the hypothesized increase in relative abundance of different phototrophs by 16S rRNA gene sequencing. In addition to the increase of the targeted phototrophs, we studied the effect of the different treatments on chemotrophic members. The specific activation of Thermosynechococcus led to increased abundance of several other bacteria, whereas wavelengths specific to Chloroflexus and Roseiflexus induced a decrease in >50% of the community members as compared to the dark conditions. This suggests that the growth of Thermosynechococcus at the surface layer benefits many community members, whereas less benefit is obtained from an increase in filamentous anoxygenic phototrophs Chloroflexus and Roseiflexus. The increases in relative abundance of chemotrophs under different light conditions suggest a relationship between the two groups. Aerobic chemoheterotrophs such as Thermus sp. and Meiothermus sp. are thought to benefit from aerobic conditions and organic carbon in the form of photosynthates by Thermosynechococcus, while the oxidation of sulfide and production of elemental sulfur by filamentous anoxygenic phototrophs benefit the sulfur-disproportionating Caldimicrobium thiodismutans. In this study, we used an experimental approach under controlled environmental conditions for the analysis of natural microbial communities, which proved to be a powerful tool to study interspecies relationships in the microbiome. [ABSTRACT FROM AUTHOR]
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- 2018
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12. Dynamic cellular complexity of anoxygenic phototrophic sulfur bacteria in the chemocline of meromictic Lake Cadagno.
- Author
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Danza, Francesco, Storelli, Nicola, Roman, Samuele, Lüdin, Samuel, and Tonolla, Mauro
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PHOTOSYNTHETIC bacteria , *BACTERIA phylogeny , *SULFUR bacteria , *BIOFLUORESCENCE , *FLOW cytometry , *FRESHWATER ecology - Abstract
The meromictic Lake Cadagno is characterized by a compact chemocline with high concentrations of anoxygenic phototrophic purple sulfur bacteria (PSB) and green sulfur bacteria (GSB). The co-occurrence of phylogenetically distant bacterial groups such as PSB and GSB in the same ecological niche, makes the chemocline of Lake Cadagno an ideal system for studying the conditions and consequences of coexistence of photosynthetic bacteria populations. In this study, we applied flow cytometry (FCM) as a fast tool to identify metabolic changes due to the production and consumption of inclusion bodies such as sulfur globules (SGBs), and follow population dynamics of closely related anoxygenic photosynthetic sulfur bacteria in their natural environment. Large-celled PSB Chromatium okenii and GSB Chlorobium populations were reliably separated and identified due to differences in auto-fluorescence and cell size. Moreover, we showed that these dominant taxa share the same ecological niche over seasonal periods. Taking advantage of FCM detection of dynamic cellular complexity variation during phases of photosynthetic activity, we identified an unexpected alternation in PSB versus GSB metabolic activity, indicating dynamic interspecific interactions between these two populations. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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13. Influence of monoterpenoids on the growth of freshwater cyanobacteria
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Lucyna Balcerzak, Stanisław Lochyński, and Jacek Lipok
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0106 biological sciences ,Cyanobacteria ,Bloomformation ,Microorganism ,Cyanobacterial consortium ,Antarctic Regions ,Fresh Water ,010501 environmental sciences ,01 natural sciences ,Applied Microbiology and Biotechnology ,chemistry.chemical_compound ,Environmental Biotechnology ,Phytoplankton ,Botany ,0105 earth and related environmental sciences ,biology ,010604 marine biology & hydrobiology ,Inhibition of growth ,General Medicine ,Metabolism ,Monoterpenoid ,Eutrophication ,biology.organism_classification ,Eugenol ,Eucalyptol ,chemistry ,Carbon dioxide ,Monoterpenes ,Photosynthetic bacteria ,Bloom formation ,Biotechnology - Abstract
Abstract Cyanobacteria are characterized by a very high tolerance to environmental factors. They are found in salt water, fresh water, thermal springs, and Antarctic waters. The wide spectrum of habitats suitable for those microorganisms is related to their particularly effective metabolism; resistance to extreme environmental conditions; and the need for only limited environmental resources such as water, carbon dioxide, simple inorganic salts, and light. These metabolic characteristics have led to cyanobacterial blooms and the production of cyanotoxins, justifying research into effective ways to counteract the excessive proliferation of these microorganisms. A new and interesting idea for the immediate reduction of cyanobacterial abundance is to use natural substances with broad-spectrum biological activity to restore phytoplankton diversity. This study describes the effects of selected monoterpenoid derivatives on the development of cyanobacterial cultures. In the course of the study, some compounds ((±)-citronellal, (+)-α-pinene) showed the ability to inhibit the colonization of the tested photosynthetic bacteria, while others (eugenol, eucalyptol) stimulated the growth of these microorganisms. By analyzing the results of these experiments, information was obtained on the mutual relations of cyanobacteria and the tested monoterpenes, which are present in the aquatic environment. Key points • Monoterpenoids significantly inhibit the growth of single cyanobacterial strains. • Monoterpenoids can inhibit the growth of cyanobacterial consortia. • Natural substances can control the growth of freshwater cyanobacteria.
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- 2021
14. Diurnal changes in bacterial communities in oxic surface and hypoxic middle seawater layers of the Changjiang River Estuary
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Jianxin Wang, Yan Huang, Habib U. Rehman Jakhrani, Yingping Fan, and Lei Yuan
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Cyanobacteria ,geography ,geography.geographical_feature_category ,Phototroph ,biology ,Ecology ,Chemistry ,Bacteroidetes ,Hypoxia (environmental) ,Estuary ,Aquatic Science ,Oceanography ,biology.organism_classification ,Synechococcus ,Photosynthetic bacteria ,Relative species abundance - Abstract
The Changjiang River Estuary (CRE) in the East China Sea suffers from seasonal hypoxia in summer. The vertical distributions and seasonal changes of microbial communities in the CRE were well documented. However, little is known about the diurnal changes of bacterial communities in the hypoxic zone of the CRE. Here, 16S rRNA gene analysis was used to explore the changes of bacterial communities in the oxic surface and hypoxic middle seawater layers during 24 h in the CRE. Significant differences between the hypoxic and oxic layers were observed: the phyla Cyanobacteria, Bacteroidetes and Acidimicrobiia were enriched in the oxic layer, whereas the phylum SAR406 and the class Deltaproteobacteria were more abundant in the hypoxic layer. In addition, some subtle diurnal variations of the bacterial relative abundance were found in both two layers. The relative abundance of Synechococcus increased at night, and this change was more obvious in the hypoxic layer. The similar trend was also found in some phototrophic and several heterotrophic bacteria, such as Rhodobacteraceae, OM60 and Flavobacteriaceae. Their relative abundances peaked at 16:00 in the oxic layer, while the relative abundances peaked at around 7:00 and decreased until 13:00 in the hypoxic layer. Together, the results of the present study suggest that some photosynthetic bacteria and several heterotrophic bacteria have similar diurnal variations implying the light and physicochemical heterogeneity in the course of a day are important for bacterial diurnal changes in the CRE.
- Published
- 2021
15. Screening and Characterization of Anoxigenic Photosynthetic Bacteria as Producer of Caroteniod Pigments From Palm Liquid Sewages
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Fitratul Aini, Ummi Mardhiah Batubara, and Manta Mentari Manurung
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Pigment ,Chemistry ,visual_art ,visual_art.visual_art_medium ,Photosynthetic bacteria ,Food science ,Palm - Abstract
Palm liquid sewage is organic waste that contains complex compounds such as water, oil, and organic solids. The organic content of palm liquid sewages is an indication of the abundance of microorganisms. This study aims to obtain anoxygenic photosynthetic bacteria (BFA) that produce carotenoid pigments from palm liquid sewages. Therefore, We isolated and screened of BFA from three palm liquid sewage disposal sites in Jambi Province. This research was conducted by an experimental method using a modified mineral medium. BFA isolates that growth and produced carotenoid pigments are visible because of the distribution of reddish-yellow pigments on the culture media. Screening results obtained 11 isolates of BFA sequentially Bg1K201, Bg1K202, Bg2k201, Bg3k201, Mr1k201, Mr1k202, Sl1k201, Sl1k202, Sl2k201, Sl2k202 and Sl3k202. The results of morphological and physiological characterization based on the Bergeys Manual of Determinative Bacteriology show that there are two types of BFA genera that have carotenoid pigments, respectively, the genus Rhodobacter (Bg1k201, Bg1k202, Bg3k201, Sl1k201, Sl1k202, and Sl1k202, and Sl2k202, and Sl1k202, and Sl2k202, and Sl1k202 and Sl2k202, and Sl2k202, and Sl2k202. Sl2k202, and) the genus Rhodopseudomonas (Bg2k201, Mr1k201 and Mr1k202)
- Published
- 2021
16. Excitation Energy Transfer from Bacteriochlorophyll b in the B800 Site to B850 Bacteriochlorophyll a in Light-Harvesting Complex 2
- Author
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Yoshitaka Saga, Tsubasa Hidaka, Michie Imanishi, Yuto Masaoka, Yukihiro Kimura, Madoka Yamashita, and Yutaka Nagasawa
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010304 chemical physics ,Energy transfer ,Orbital overlap ,010402 general chemistry ,Photochemistry ,Photosynthesis ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Light-harvesting complex ,chemistry.chemical_compound ,chemistry ,Absorption band ,0103 physical sciences ,Materials Chemistry ,Bacteriochlorophyll ,Photosynthetic bacteria ,Physical and Theoretical Chemistry ,Excitation - Abstract
Control of the spectral overlap between energy donors and acceptors provides insight into excitation energy transfer (EET) mechanisms in photosynthetic light-harvesting proteins. Substitution of energy-donating B800 bacteriochlorophyll (BChl) a with other pigments in the light-harvesting complex 2 (LH2) of purple photosynthetic bacteria has been extensively performed; however, most studies on the B800 substitution have focused on the decrease in the spectral overlap integral with energy-accepting B850 BChl a by reconstitution of chlorophylls into the B800 site. Here, we reconstitute BChl b into the B800 site of the LH2 protein from Rhodoblastus acidophilus to increase the spectral overlap with B850 BChl a. BChl b in the B800 site had essentially the same hydrogen-bonding pattern as B800 BChl a, whereas it showed a red-shifted Qy absorption band at 831 nm. The EET rate from BChl b to B850 BChl a in the reconstituted LH2 was similar to that of native LH2 despite the red shift of the Qy band of the energy donor. These results demonstrate the importance of the contribution of the density of excitation states of the B850 circular assembly, which incorporates higher lying optically forbidden states, to intracomplex EET in LH2.
- Published
- 2021
17. Enhancement of biodiesel-promising microalgae Chlorella pyrenoidosa growth using stimulants in municipal sewage
- Author
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Qing Wang, Wenbiao Jin, Xu Zhou, Shu-Hong Gao, Yidi Chen, and Cong Zhang
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Biodiesel ,Lipid accumulation ,biology ,Renewable Energy, Sustainability and the Environment ,Chemistry ,020209 energy ,Biomass ,Municipal sewage ,02 engineering and technology ,010501 environmental sciences ,Photosynthesis ,biology.organism_classification ,01 natural sciences ,Dry weight ,0202 electrical engineering, electronic engineering, information engineering ,Chlorella pyrenoidosa ,Food science ,Photosynthetic bacteria ,0105 earth and related environmental sciences - Abstract
Cultivation of high-lipid microalgae using municipal sewage can both treat polluted water and gain biodiesel. Rapid cultivation of microalgae is crucial for the entire process. In this study, four stimulants (phytohormone 2,4-d; Fe3+; photosynthetic bacteria—Rhodopseudomonas palustris; CO2) were firstly chosen to investigate their effects on microalgae Chlorella pyrenoidosa cultivation in municipal sewage. Meanwhile, orthogonal experiments were designed to compare the enhancing effects on the growth of microalgae C. pyrenoidosa and lipid accumulation by different combinations of stimulants, which were also conducted for outdoor culture. The optimum stimulant combination was 1.0 mg/L 2,4-d; 10−7 mol/L Fe3+; 4.5 mL (109 cells/mL) photosynthetic bacteria; and 8% CO2. Among the four kinds of stimulants, phytohormone 2,4-d and photosynthetic bacteria played more important roles on the microalgae growth and lipid accumulation. The optimum combination of stimulants could also promote the microalgae biomass and lipid yield during outdoor cultivation. The maximum OD681 of microalgae was 37.9% higher than that of the control group without addition of stimulants. The obtained microalgae dry weight and lipid production were 0.3 and 0.13 g /L, which were 80.0% and 85.7% higher than that of the control group, respectively. The promotion of microalgae photosynthetic rate was the main reason for the stimulant-enhanced microalgae cultivation. This study exerts positive effects on the development of microalgae biodiesel.
- Published
- 2021
18. Enhancing hydrogen production by photobiocatalysis through Rhodopseudomonas palustris coupled with conjugated polymers
- Author
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Hao Geng, Chengfen Xing, Dong Gao, and Zijuan Wang
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biology ,Renewable Energy, Sustainability and the Environment ,Electron donor ,02 engineering and technology ,General Chemistry ,Conjugated system ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,biology.organism_classification ,01 natural sciences ,0104 chemical sciences ,Catalysis ,chemistry.chemical_compound ,Electron transfer ,chemistry ,Polythiophene ,General Materials Science ,Photosynthetic bacteria ,Rhodopseudomonas palustris ,0210 nano-technology ,Hydrogen production - Abstract
Utilizing solar energy for hydrogen production by combining light-activated materials and biocatalysts has become a promising alternative to fossil fuels. Herein, a feasible and simple bio-hybrid complex based on water-soluble oligofluorene (OF), polythiophene (PTP) and Rhodopseudomonas palustris (R. palustris), one kind of photosynthetic bacteria, was constructed for enhancing photocatalytic hydrogen production. Under the irradiation of visible light, there was fluorescence resonance energy transfer (FRET) between OF and PTP, which amplified photoelectron signals and transferred electrons via PTP to methyl viologen (MV2+), an electron mediator that established electron transfer pathways between organic materials and R. palustris. Hydrogen production involving R. palustris was catalyzed by nitrogenase. It is noteworthy that MV2+ was reduced to MV+˙ and transferred electrons to nitrogenase in R. palustris, converting protons and electrons to molecular hydrogen. Besides, triethanolamine (TEOA) was added as an electron donor to provide electrons to PTP. The proposed OF/PTP/MV2+/TEOA/R. palustris system provided a feasible strategy for photocatalytic hydrogen production with low-cost and easily implemented techniques.
- Published
- 2021
19. Isolation and Characterization of Anoxygenic Photosynthetic Bacteria for Reducing Ammonia and Probiotics Candidate
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Achmad Arifiyanto, Sumardi, Desfika Ardia Putr, Bambang Irawan, Tugiyono, and Rochmah Agustrina
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Ammonia ,chemistry.chemical_compound ,Multidisciplinary ,chemistry ,Biochemistry ,Photosynthetic bacteria ,Isolation (microbiology) ,Anoxygenic photosynthesis - Published
- 2020
20. In Vitro Hydrolysis of Zinc Chlorophyllide a Homologues by a BciC Enzyme
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Hitoshi Tamiaki, Mitsuaki Hirose, and Jiro Harada
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chemistry.chemical_classification ,0303 health sciences ,Decarboxylation ,Stereochemistry ,Carboxylic acid ,030302 biochemistry & molecular biology ,Chlorosome ,Biochemistry ,Enzyme catalysis ,03 medical and health sciences ,Hydrolysis ,Enzyme ,chemistry ,Enzymatic hydrolysis ,Photosynthetic bacteria - Abstract
Chlorosomes in green photosynthetic bacteria are the largest and most efficient light-harvesting antenna systems of all phototrophs. The core part of chlorosomes consists of bacteriochlorophyll c, d, or e molecules. In their biosynthetic pathway, a BciC enzyme catalyzes the removal of the C132-methoxycarbonyl group of chlorophyllide a. In this study, the in vitro enzymatic reactions of chlorophyllide a analogues, C132-methylene- and ethylene-inserted zinc complexes, were examined using a BciC protein from Chlorobaculum tepidum. As the products, their hydrolyzed free carboxylic acids were observed without the corresponding demethoxycarbonylated compounds. The results showed that the in vivo demethoxycarbonylation of chlorophyllide a by an action of the BciC enzyme would occur via two steps: (1) an enzymatic hydrolysis of a methyl ester at the C132-position, followed by (2) a spontaneous (nonenzymatic) decarboxylation in the resulting carboxylic acid.
- Published
- 2020
21. Self-Propelled and Near-Infrared-Phototaxic Photosynthetic Bacteria as Photothermal Agents for Hypoxia-Targeted Cancer Therapy
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Xinyue Dai, Ke Cheng, Xing-Jie Liang, Huifang Liu, Shutao Guo, Xiaohan Zhou, Hang Li, Shiqi Hu, Zhenhua Li, Pengli Zheng, Jinchao Zhang, Xinjian Yang, Miao Fan, Yinghua Zhang, Na Yu, and Yi Jin
- Subjects
Chemistry ,medicine.medical_treatment ,General Engineering ,General Physics and Astronomy ,Chemotaxis ,Hyperthermia, Induced ,Phototherapy ,Photothermal therapy ,Radiation therapy ,Extracellular matrix ,Drug Delivery Systems ,Immune system ,Neoplasms ,Cancer cell ,medicine ,Cancer research ,Humans ,General Materials Science ,Photosynthetic bacteria ,Hypoxia ,Cytotoxicity - Abstract
Hypoxia can increase the resistance of tumor cells to radiotherapy and chemotherapy. However, the dense extracellular matrix, high interstitial fluid pressure, and irregular blood supply often serve as physical barriers to inhibit penetration of drugs or nanodrugs across tumor blood microvessels into hypoxic regions. Therefore, it is of great significance and highly desirable to improve the efficiency of hypoxia-targeted therapy. In this work, living photosynthetic bacteria (PSB) are utilized as hypoxia-targeted carriers for hypoxic tumor therapy due to their near-infrared (NIR) chemotaxis and their physiological characteristics as facultative aerobes. More interestingly, we discovered that PSB can serve as a kind of photothermal agent to generate heat through nonradiative relaxation pathways due to their strong photoabsorption in the NIR region. Therefore, PSB integrate the properties of hypoxia targeting and photothermal therapeutic agents in an "all-in-one" manner, and no postmodification is needed to achieve hypoxia-targeted cancer therapy. Moreover, as natural bacteria, noncytotoxic PSB were found to enhance immune response that induced the infiltration of cytotoxicity T lymphocyte. Our results indicate PSB specifically accumulate in hypoxic tumor regions, and they show a high efficiency in the elimination of cancer cells. This proof of concept may provide a smart therapeutic system in the field of hypoxia-targeted photothermal therapeutic platforms.
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- 2020
22. Metabolic Engineering and Synthetic Biology of Cyanobacteria for Carbon Capture and Utilization
- Author
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Aran Incharoensakdi, Jong-il Choi, Han Min Woo, and Napisa Pattharaprachayakul
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0106 biological sciences ,Cyanobacteria ,0303 health sciences ,biology ,Chemistry ,Biomedical Engineering ,Bioengineering ,biology.organism_classification ,01 natural sciences ,Applied Microbiology and Biotechnology ,Metabolic engineering ,Terpene ,03 medical and health sciences ,Synthetic biology ,010608 biotechnology ,Yield (chemistry) ,Biochemical engineering ,Photosynthetic bacteria ,Industrial and production engineering ,030304 developmental biology ,Biotechnology - Abstract
Cyanobacteria are photosynthetic bacteria that can directly convert CO2 into several bio-products for industrial use, such as alcohols and diols, terpenes, acids, and sugars. However, some of these compounds are either produced in low amounts or are absent in cyanobacteria, and thus strain development is required to achieve optimal production of these bio-products for industrial applications. Metabolic engineering has been applied to modify cyanobacteria for enhanced production of value-added compounds. In this review, we have elucidated metabolic engineering of various pathways with the yield and productivity of the desired products. We have also described recent overall strategies in advanced metabolic engineering.
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- 2020
23. Biosynthesis of the Calorie-Free Sweetener Precursor ent-Kaurenoic Acid from CO2 Using Engineered Cyanobacteria
- Author
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Han Min Woo and Sung Cheon Ko
- Subjects
biology ,Biomedical Engineering ,Cytochrome P450 ,Steviol ,General Medicine ,biology.organism_classification ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Metabolic engineering ,chemistry.chemical_compound ,Biochemistry ,chemistry ,Biosynthesis ,otorhinolaryngologic diseases ,biology.protein ,Fermentation ,Photosynthetic bacteria ,Stevioside ,Bacteria - Abstract
To supply the sustainable calorie-free sweetener stevioside, synthetic photosynthetic bacteria were developed to produce ent-kaurenoic acid as a precursor of stevioside directly from CO2. By the use of a combinatorial and modular approach for gene expression, including a cytochrome P450 and the corresponding reductase, engineered Synechoccous elongatus PCC 7942 as a model cyanobacterium enabled the biosynthesis of ent-kaurenoic acid at 2.9 ± 0.01 mg L-1 from CO2. We found that the order of genes for expression was critical, producing ent-kaurenoic acid by balancing gene expressions and accumulation of the toxic intermediate in a cell. The engineered bacteria allowed the complete biosynthesis of ent-kaurenoic acid, and it will be used for stevioside biosynthesis from CO2 as a controlled fermentation.
- Published
- 2020
24. Real-Time Path Integral Simulation of Exciton-Vibration Dynamics in Light-Harvesting Bacteriochlorophyll Aggregates
- Author
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Nancy Makri and Sohang Kundu
- Subjects
Models, Molecular ,Time Factors ,Light ,Exciton ,Light-Harvesting Protein Complexes ,010402 general chemistry ,Vibration ,01 natural sciences ,Protein Aggregates ,chemistry.chemical_compound ,0103 physical sciences ,Computer Simulation ,General Materials Science ,Photosynthesis ,Physics::Chemical Physics ,Physical and Theoretical Chemistry ,Bacteriochlorophylls ,Quantum ,Physics ,Physics::Biological Physics ,010304 chemical physics ,0104 chemical sciences ,Energy Transfer ,chemistry ,Chemical physics ,Intramolecular force ,Path integral formulation ,Bacteriochlorophyll ,Photosynthetic bacteria ,Excitation ,Coherence (physics) - Abstract
The mechanism of excitation energy transfer in photoexcited bacteriochlorophyll (BChl) aggregates poses intriguing questions, which have important implications for the observed efficiency of photosynthesis. We investigate this process through fully quantum mechanical calculations of exciton-vibration dynamics in chains and rings of BChl a molecules, with parameters characterizing the B850 ring of the LH2 complex of photosynthetic bacteria. The calculations are performed using the modular path integral methodology, which allows the exact treatment of 50 intramolecular vibrations on each pigment using parameters obtained from spectroscopic Huang-Rhys factors with computational effort that scales linearly with aggregate length. Our results indicate that the interplay between electronic and vibrational time scales leads to the rapid suppression but not the overdamping of electronic coherence, which facilitates the spreading of excitation energy throughout the aggregate.
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- 2020
25. Enhancing the Light Coverage of Photosynthetic Bacteria to Augment Photosynthesis by Conjugated Polymer Nanoparticles
- Author
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Dong Gao, Zijuan Wang, Yong Zhan, and Chengfen Xing
- Subjects
chemistry.chemical_classification ,biology ,Chemistry ,viruses ,Biochemistry (medical) ,Biomedical Engineering ,Nanoparticle ,Peptide ,General Chemistry ,Polymer ,engineering.material ,Conjugated system ,Photosynthesis ,biology.organism_classification ,Biomaterials ,Coating ,Chemical engineering ,engineering ,Photosynthetic bacteria ,Rhodopseudomonas palustris - Abstract
By coating photosynthetic bacteria of Rhodopseudomonas palustris with conjugated polymers nanoparticles modified with positively charged peptide TAT (CPNs-TAT), a bio-optical hybrid composite of R....
- Published
- 2022
26. Synthesis of UDP-apiose in Bacteria: The marine phototroph Geminicoccus roseus and the plant pathogen Xanthomonas pisi.
- Author
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Smith, James Amor and Bar-Peled, Maor
- Subjects
- *
PSEUDOMONADACEAE , *BACTERIOPHAGES , *PHYTOPATHOGENIC microorganisms , *RHAMNOGALACTURONANS , *PHOTOSYNTHETIC bacteria , *XANTHOMONAS - Abstract
The branched-chain sugar apiose was widely assumed to be synthesized only by plant species. In plants, apiose-containing polysaccharides are found in vascularized plant cell walls as the pectic polymers rhamnogalacturonan II and apiogalacturonan. Apiosylated secondary metabolites are also common in many plant species including ancestral avascular bryophytes and green algae. Apiosyl-residues have not been documented in bacteria. In a screen for new bacterial glycan structures, we detected small amounts of apiose in methanolic extracts of the aerobic phototroph Geminicoccus roseus and the pathogenic soil-dwelling bacteria Xanthomonas pisi. Apiose was also present in the cell pellet of X. pisi. Examination of these bacterial genomes uncovered genes with relatively low protein homology to plant UDP-apiose/UDP-xylose synthase (UAS). Phylogenetic analysis revealed that these bacterial UAS-like homologs belong in a clade distinct to UAS and separated from other nucleotide sugar biosynthetic enzymes. Recombinant expression of three bacterial UAS-like proteins demonstrates that they actively convert UDP-glucuronic acid to UDP-apiose and UDP-xylose. Both UDP-apiose and UDP-xylose were detectable in cell cultures of G. roseus and X. pisi. We could not, however, definitively identify the apiosides made by these bacteria, but the detection of apiosides coupled with the in vivo transcription of bUAS and production of UDP-apiose clearly demonstrate that these microbes have evolved the ability to incorporate apiose into glycans during their lifecycles. While this is the first report to describe enzymes for the formation of activated apiose in bacteria, the advantage of synthesizing apiose-containing glycans in bacteria remains unknown. The characteristics of bUAS and its products are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
27. Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 Å resolution.
- Author
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Ohno, Hiraku, Takeda, Kazuki, Niwa, Satomi, Tsujinaka, Tomotaka, Hanazono, Yuya, Hirano, Yu, and Miki, Kunio
- Subjects
- *
PHOTOSYNTHETIC bacteria , *IRON-sulfur proteins , *CRYSTALLOGRAPHY , *CHARGE exchange , *ANISOTROPY - Abstract
High-potential iron-sulfur protein (HiPIP) is a soluble electron carrier protein of photosynthetic bacteria with an Fe4S4 cluster. Although structural changes accompanying the electron transfer are important for understanding of the functional mechanism, the changes have not been clarified in sufficient detail. We previously reported the high-resolution crystal structures of HiPIP from a thermophilic purple bacterium Thermochromatium tepidum in the reduced state. In order to perform a detailed comparison between the structures in different redox states, the oxidized structure should also be revealed at high resolution. Therefore, in the present study we performed a crystallographic analysis of oxidized HiPIP and a structural comparison with the reduced form at a high resolution of 0.8 Å. The comparison highlighted small but significant contraction in the iron-sulfur cluster. The changes in Fe-S bond lengths were similar to that predicted by theoretical calculation, although some discrepancies were also found. Almost distances between the sulfur atoms of the iron-sulfur cluster and the protein environment are elongated upon the oxidation. Positional changes of hydrogen atoms in the protein environment, such as on the amide-hydrogen of Cys75 in the proximity of the iron-sulfur cluster, were also observed in the accurate analyses. None of the water molecules exhibited significant changes in position or anisotropy of atomic displacement parameter between the two states, while the orientations of some water molecules were different. [ABSTRACT FROM AUTHOR]
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- 2017
- Full Text
- View/download PDF
28. Simultaneous photocatalytic and microbial degradation of dye-containing wastewater by a novel g-C3N4-P25/photosynthetic bacteria composite.
- Author
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Zhang, Xinying, Wu, Yan, Xiao, Gao, Tang, Zhenping, Wang, Meiyin, Liu, Fuchang, and Zhu, Xuefeng
- Subjects
- *
PHOTOCATALYSIS , *BIODEGRADATION , *WASTEWATER treatment , *PHOTOSYNTHETIC bacteria , *CALCIUM alginate - Abstract
Azo dyes are very resistant to light-induced fading and biodegradation. Existing advanced oxidative pre-treatment methods based on the generation of non-selective radicals cannot efficiently remove these dyes from wastewater streams, and post-treatment oxidative dye removal is problematic because it may leave many byproducts with unknown toxicity profiles in the outgoing water, or cause expensive complete mineralization. These problems could potentially be overcome by combining photocatalysis and biodegradation. A novel visible-light-responsive hybrid dye removal agent featuring both photocatalysts (g-C3N4-P25) and photosynthetic bacteria encapsulated in calcium alginate beads was prepared by self-assembly. This system achieved a removal efficiency of 94% for the dye reactive brilliant red X-3b and also reduced the COD of synthetic wastewater samples by 84.7%, successfully decolorized synthetic dye-contaminated wastewater and reduced its COD, demonstrating the advantages of combining photocatalysis and biocatalysis for wastewater purification. The composite apparently degrades X-3b by initially converting the dye into aniline and phenol derivatives whose aryl moieties are then attacked by free radicals to form alkyl derivatives, preventing the accumulation of aromatic hydrocarbons that might suppress microbial activity. These alkyl intermediates are finally degraded by the photosynthetic bacteria. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
29. Using integrating sphere spectrophotometry in unicellular algal research
- Author
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Raymond J. Ritchie and Suhailar Sma-Air
- Subjects
0106 biological sciences ,Chlorophyll a ,biology ,Chemistry ,010604 marine biology & hydrobiology ,Plant Science ,Photosynthetic pigment ,Aquatic Science ,biology.organism_classification ,Synechococcus ,Photochemistry ,Photosynthesis ,01 natural sciences ,Anoxygenic photosynthesis ,chemistry.chemical_compound ,Chlorella ,Photosynthetic bacteria ,Bacteriochlorophyll ,010606 plant biology & botany - Abstract
Scanning spectrophotometers equipped with integrating spheres were once highly specialized spectrophotometric equipment but are now more readily available commercially. They are particularly useful for objectively assessing the spectral absorption and reflectance of algal cell suspensions. Ordinary dual-beam spectrometers do not give valid measurements of the spectral properties of cells due to light scattering. Spectra of unicellular algae using integrating sphere spectroscopy can measure the absorbance (Abs), transmissions (%T) and reflectance (%R) and hence the actual absorptance (%Abt) of turbid cell suspensions and hence the in vivo pigment absorption properties of photosynthetic organisms. These results were compared with those obtained using conventional dual-beam spectrophotometry scans on turbid cell suspensions and the in solvent spectra of photosynthetic pigments. The common unicellular green alga, Chlorella sp., is used as an example of an oxygenic photo-organism with chlorophyll a as the primary photosynthetic pigment and comparisons made to other unicellular algae such as a cyanobacterium (Synechococcus), Acaryochloris and a diatom (Chaetoceros). Photosynthetic bacteria, such as Rhodopseudomonas palustris, are photosynthetic but do not produce oxygen, and their photosynthesis is usually based on bacteriochlorophyll a. Comparisons are made of integrating sphere vs. dual-beam transmission spectroscopy of BChl a and BChl b organisms in solvent and in vivo of anoxygenic photosynthetic bacteria (Afifella & Thermochromatium [BChl a], Blastochloris [BChl b]) and with oxygenic organisms.
- Published
- 2020
30. Metabolomics analysis of carotenoid production from Proteiniphilum acetatigenes PSB-W based on LC-MS
- Author
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Xiaoli Gao, Yan Wang, and Qingping Hu
- Subjects
0106 biological sciences ,0301 basic medicine ,chemistry.chemical_classification ,biology ,Chemistry ,Metabolite ,030106 microbiology ,food and beverages ,Plant Science ,biology.organism_classification ,01 natural sciences ,Microbiology ,03 medical and health sciences ,Light intensity ,chemistry.chemical_compound ,Infectious Diseases ,Metabolomics ,Biochemistry ,010608 biotechnology ,Fermentation ,Photosynthetic bacteria ,KEGG ,Carotenoid ,Bacteria - Abstract
Metabolomics based on LC-MS was used for the analysis of the fermentation of Proteiniphilum acetatigenes PSB-W treated by different culture time and different light intensity. 26 putative metabolites were detected in samples treated by different culture time. Most of the components were produced in the metabolic activity in order to participate in the whole life process of bacteria. Compared with samples treated with light intensity, a total of 37 metabolites were detected and analyzed. Only 10 compounds were detected in 1000 Lux group, which is significantly less than 1500 Lux group. The metabolite data of light groups were passed through principal component analysis (PCA) and differential metabolites were screened for each comparison group by using the Volcano Plot model. The differential metabolites were annotated by the Kyoto Encyclopedia of Genes and Genomes (KEGG) database and 7 differential metabolites related to the carotenoid synthesis enrichment pathway were screened. The results showed that carotenoids synthesis may occur during the stationary phase of bacterial growth. The precursor of carotenoid synthesis of photosynthetic bacteria is isopentenyl diphosphate (IPP) synthesized by acetyl coenzyme A under the catalysis of HMG CoA reductase. It is preliminarily clarified that it is the accumulation mechanism of bacterial carotenoid biosynthesis and provides a new clue for the comprehensive study of the synthesis and regulation mechanism of carotenoids. Key words: Carotenoids, metabolomics analysis, Proteiniphilum acetatigenes PSB-W.
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- 2020
31. Ferro-chelatase enzyme activity of blue green algae from Yeşilırmak
- Author
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Önder Idil, Vahit Konar, Emine Çelikoğlu, and Umut Çelikoğlu
- Subjects
chemistry.chemical_classification ,biology ,Basic Sciences ,Chemistry ,Stereochemistry ,Temel Bilimler ,Ferrochelatase ,Blue green algae,Ferro-chelatase,Tetra pyrrole,Yeşilırmak ,Enzyme assay ,Cofactor ,chemistry.chemical_compound ,Enzyme ,Chlorophyll ,biology.protein ,General Earth and Planetary Sciences ,Photosynthetic bacteria ,Heme ,General Environmental Science ,Pyrrole - Abstract
Blue green algae are microscopic photosynthetic bacteria, naturally in ponds, rivers, lakes and streams. Tetra pyrroles can be classified based on the presence, position and substituents of a chelated metal in the pyrrole ring. Heme and chlorophyll, which are the most common tetra pyrolle in nature, are synthesized by blue green algae. Heme is an essential cofactor for virtually all forms of life and the last step of heme biosynthesis is catalyzed by ferrochelatase enzyme. In this study, blue green algae, photosynthetic bacteria, isolated from Yeşilırmak were used. Eight morphologically different isolates were obtained. The highest specific activity belongs to isolate 8 as 0.217 Umg-1.
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- 2020
32. Heterologous Expression of the Barley (Hordeum vulgare L.) Xantha-f, -g and -h Genes that Encode Magnesium Chelatase Subunits
- Author
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Helmy M. Youssef, David Stuart, Mats Hansson, and Rabab Mahdi
- Subjects
0106 biological sciences ,Enzyme complex ,Mg-chelatase ,Lyases ,Bioengineering ,01 natural sciences ,Biochemistry ,Article ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Barley ,Magnesium chelatase ,Xantha ,030304 developmental biology ,Plant Proteins ,0303 health sciences ,Protoporphyrin IX ,Chemistry ,Organic Chemistry ,food and beverages ,Hordeum ,Protoporphyrin ,Recombinant Proteins ,Magnesium chelatase activity ,Chloroplast ,Hordeum vulgare ,Heterologous expression ,Photosynthetic bacteria ,Chlorophyll biosynthesis ,010606 plant biology & botany - Abstract
Biosynthesis of chlorophyll involves several enzymatic reactions of which many are shared with the heme biosynthesis pathway. Magnesium chelatase is the first specific enzyme in the chlorophyll pathway. It catalyzes the formation of Mg-protoporphyrin IX from the insertion of Mg2+ into protoporphyrin IX. The enzyme consists of three subunits encoded by three genes. The three genes are named Xantha-h, Xantha-g and Xantha-f in barley (Hordeum vulgare L.). The products of the genes have a molecular weight of 38, 78 and 148 kDa, respectively, as mature proteins in the chloroplast. Most studies on magnesium chelatase enzymes have been performed using recombinant proteins of Rhodobacter capsulatus, Synechocystis sp. PCC6803 and Thermosynechococcus elongatus, which are photosynthetic bacteria. In the present study we established a recombinant expression system for barley magnesium chelatase with the long-term goal to obtain structural information of this enigmatic enzyme complex from a higher plant. The genes Xantha-h, -g and -f were cloned in plasmid pET15b, which allowed the production of the three subunits as His-tagged proteins in Escherichia coli BL21(DE3)pLysS. The purified subunits stimulated magnesium chelatase activity of barley plastid extracts and produced activity in assays with only recombinant proteins. In preparation for future structural analyses of the barley magnesium chelatase, stability tests were performed on the subunits and activity assays were screened to find an optimal buffer system and pH.
- Published
- 2020
33. Measuring photosynthesis of both oxygenic and anoxygenic photosynthetic organisms using pulse amplitude modulation (PAM) fluorometry in wastewater ponds
- Author
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John W. Runcie, P. Chandaravithoon, and Raymond J. Ritchie
- Subjects
0106 biological sciences ,010604 marine biology & hydrobiology ,DCMU ,Plant Science ,Aquatic Science ,Photosynthesis ,Photochemistry ,01 natural sciences ,Anoxygenic photosynthesis ,Fluorescence spectroscopy ,chemistry.chemical_compound ,chemistry ,Fluorometer ,Chlorophyll ,Photosynthetic bacteria ,Bacteriochlorophyll ,010606 plant biology & botany - Abstract
Oxygenic photosynthesis can be measured easily using O2 or CO2 gas exchange, oxygen electrodes, Winkler titration, 14CO2-fixation and by PAM (pulse amplitude modulation) fluorometry. PAM estimates the photosynthetic electron transport rate (ETR) by measuring the variable fluorescence of chlorophyll (Chl) a (> 695 nm) induced by absorption of blue or red light. Anoxygenic photosynthetic bacteria (APB) do not use water as an electron source and are typically photoheterotrophic rather than photoautotrophic and so 14CO2 fixation is a misleading estimate of photosynthetic electron transport in APB photosynthesis. In vivo bacteriochlorophyll a (BChl a) absorbs blue light similar to Chl a but its characteristic longer-wavelength absorption is in the infrared and fluorescence is at > 800 nm. Blue light-induced PAM fluorescence can be used to measure the ETR in purple non-sulphur anoxygenic photobacteria and purple sulphur photobacteria because their RC-2 type BChl a complexes fluoresce similarly to PSII but at longer wavelengths than Chl a. Conventional PAM fluorometers using blue light cannot readily distinguish between oxygenic and RC-2 type anoxygenic photosynthesis because they use a simple > 700 nm highpass filter in front of the detector diode. We modified one fluorometer to use a 695–750-nm bandpass filter to measure Chl a fluorescence from PS-II, representing oxygenic photosynthesis. Similarly, we modified another fluorometer to use a highpass filter (> 830 nm) to measure BChl a fluorescence, representing anoxygenic photosynthesis. However, the fluorescence bands of Chl a and BChl a were found to be too wide to unambiguously distinguish between oxygenic and anoxygenic photosynthesis purely by fluorometry. Treatment with the specific PS-II inhibitor DCMU (Diuron) did enable discrimination of the two types of photosynthesis in a mixture of oxygenic and anoxygenic organisms. Ecological niches made up of both oxygenic and anoxygenic organisms such as microbial mats and hypereutrophic environments such as sewage ponds, wastewater ponds and prawn farm ponds are much more common than often realized. Anoxygenic photosynthesis in such systems is significant yet largely unquantified.
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- 2020
34. Acetyl-CoA-derived biofuel and biochemical production in cyanobacteria: a mini review
- Author
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Yun-Nam Choi, Jong Moon Park, Jeong Wook Lee, and Jeong Woo Kim
- Subjects
0106 biological sciences ,Cyanobacteria ,Carbon dioxide in Earth's atmosphere ,biology ,010604 marine biology & hydrobiology ,fungi ,Carbon fixation ,Acetyl-CoA ,food and beverages ,chemistry.chemical_element ,Plant Science ,Aquatic Science ,biology.organism_classification ,01 natural sciences ,chemistry.chemical_compound ,chemistry ,Biofuel ,Environmental chemistry ,Carbon dioxide ,Environmental science ,Photosynthetic bacteria ,Carbon ,010606 plant biology & botany - Abstract
Cyanobacteria, as photosynthetic bacteria, can generate energy and carbon sources directly from sunlight and atmospheric carbon dioxide. With the aid of genetic engineering, heterologous enzymes and/or pathways have been introduced into cyanobacteria, enabling the production of various biofuels and biochemicals. By utilizing cyanobacteria as production hosts, biofuels and biochemicals can be produced directly from carbon dioxide, and ultimately carbon dioxide fixation by cyanobacteria can help reduce atmospheric carbon dioxide concentration, alleviating global warming and air pollution. In this review, we introduce various biofuels and biochemicals produced, particularly from acetyl-CoA by cyanobacteria, and summarize research strategies that have been made to improve their production. This review will provide comprehensive information and valuable insights into strategies for enhancing cyanobacterial biofuels/chemicals production.
- Published
- 2020
35. A comparative look at structural variation among RC–LH1 ‘Core’ complexes present in anoxygenic phototrophic bacteria
- Author
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Richard J. Cogdell, Alastair T. Gardiner, and Tu C. Nguyen-Phan
- Subjects
Models, Molecular ,Protein Conformation ,Stereochemistry ,Photosynthetic Reaction Center Complex Proteins ,Light-Harvesting Protein Complexes ,Reaction centres ,Rhodobacter sphaeroides ,Review ,Plant Science ,medicine.disease_cause ,Chromatiaceae ,Biochemistry ,Structure-Activity Relationship ,Anoxygenic phototrophs ,Bacterial Proteins ,Benzoquinones ,medicine ,Roseiflexus castenholzii ,Photosynthesis ,Structures ,Phototroph ,biology ,Chemistry ,Blastochloris viridis ,Genetic Variation ,Cell Biology ,General Medicine ,biology.organism_classification ,Anoxygenic photosynthesis ,Light harvesting ,Rhodopseudomonas ,Chloroflexi (class) ,Energy Transfer ,RC–LH1 ,Purple photosynthetic bacteria ,Photosynthetic bacteria ,Rhodopseudomonas palustris - Abstract
All purple photosynthetic bacteria contain RC–LH1 ‘Core’ complexes. The structure of this complex from Rhodobacter sphaeroides, Rhodopseudomonas palustris and Thermochromatium tepidum has been solved using X-ray crystallography. Recently, the application of single particle cryo-EM has revolutionised structural biology and the structure of the RC–LH1 ‘Core’ complex from Blastochloris viridis has been solved using this technique, as well as the complex from the non-purple Chloroflexi species, Roseiflexus castenholzii. It is apparent that these structures are variations on a theme, although with a greater degree of structural diversity within them than previously thought. Furthermore, it has recently been discovered that the only phototrophic representative from the phylum Gemmatimonadetes, Gemmatimonas phototrophica, also contains a RC–LH1 ‘Core’ complex. At present only a low-resolution EM-projection map exists but this shows that the Gemmatimonas phototrophica complex contains a double LH1 ring. This short review compares these different structures and looks at the functional significance of these variations from two main standpoints: energy transfer and quinone exchange.
- Published
- 2020
36. 1H, 13C and 15N assignment of the paramagnetic high potential iron–sulfur protein (HiPIP) PioC from Rhodopseudomonas palustris TIE-1
- Author
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Inês B. Trindade, Francesca Cantini, Ricardo O. Louro, Mario Piccioli, Michele Invernici, and Instituto de Tecnologia Química e Biológica António Xavier (ITQB)
- Subjects
0303 health sciences ,biology ,Chemistry ,Fast nuclear relaxation ,Resonance ,010402 general chemistry ,biology.organism_classification ,01 natural sciences ,Biochemistry ,Article ,0104 chemical sciences ,High potential iron–sulfur proteins ,High potential iron-sulfur protein ,Paramagnetic NMR ,03 medical and health sciences ,Paramagnetism ,Electron transfer ,Crystallography ,Structural Biology ,Metalloproteins ,Triple-resonance nuclear magnetic resonance spectroscopy ,Side chain ,Photosynthetic bacteria ,Rhodopseudomonas palustris ,030304 developmental biology - Abstract
High potential iron–sulfur proteins (HiPIPs) are a class of small proteins (50–100 aa residues), containing a 4Fe–4S iron–sulfur cluster. The 4Fe–4S cluster shuttles between the oxidation states [Fe4S4]3+/2+, with a positive redox potential in the range (500–50 mV) throughout the different known HiPIPs. Both oxidation states are paramagnetic at room temperature. HiPIPs are electron transfer proteins, isolated from photosynthetic bacteria and usually provide electrons to the photosynthetic reaction-center. PioC, the HIPIP isolated from Rhodopseudomonas palustris TIE-1, is the smallest among all known HiPIPs. Despite their small dimensions, an extensive NMR assignment is only available for two of them, because paramagnetism prevents the straightforward assignment of all resonances. We report here the complete NMR assignment of 1H, 13C and 15N signals for the reduced [Fe4S4]2+ state of the protein. A set of double and triple resonance experiments performed with standardized parameters/datasets provided the assignment of about 72% of the residues. The almost complete resonance assignment (99.5% of backbone and ca. 90% of side chain resonances) was achieved by combining the above information with those obtained using a second set of NMR experiments, in which acquisition and processing parameters, as well as pulse sequences design, were optimized to account for the peculiar features of this paramagnetic protein.
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- 2020
37. Energizing the plasmalemma of marine photosynthetic organisms: the role of primary active transport
- Author
-
John A. Raven and John Beardall
- Subjects
0106 biological sciences ,Exergonic reaction ,Cyanobacteria ,0303 health sciences ,biology ,Chemistry ,Aquatic Science ,biology.organism_classification ,Photosynthesis ,Acetabularia ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Algae ,Active transport ,Biophysics ,Bacteriochlorophyll ,Photosynthetic bacteria ,030304 developmental biology ,010606 plant biology & botany - Abstract
Generation of ion electrochemical potential differences by primary active transport can involve energy inputs from light, from exergonic redox reactions and from exergonic ATP hydrolysis. These electrochemical potential differences are important for homoeostasis, for signalling, and for energizing nutrient influx. The three main ions involved are H+, Na+(efflux) and Cl−(influx). In prokaryotes, fluxes of all three of these ions are energized by ion-pumping rhodopsins, with one archaeal rhodopsin pumping H+intothe cells; among eukaryotes there is also an H+influx rhodopsin inAcetabulariaand (probably) H+efflux in diatoms. Bacteriochlorophyll-based photoreactions export H+from the cytosol in some anoxygenic photosynthetic bacteria, but chlorophyll-based photoreactions in marine cyanobacteria do not lead to export of H+. Exergonic redox reactions export H+and Na+in photosynthetic bacteria, and possibly H+in eukaryotic algae. P-type H+- and/or Na+-ATPases occur in almost all of the photosynthetic marine organisms examined. P-type H+-efflux ATPases occur in charophycean marine algae and flowering plants whereas P-type Na+-ATPases predominate in other marine green algae and non-green algae, possibly with H+-ATPases in some cases. An F-type Cl−-ATPase is known to occur inAcetabularia. Some assignments, on the basis of genomic evidence, of P-type ATPases to H+or Na+as the pumped ion are inconclusive.
- Published
- 2020
38. Effects of Extracted from Photosynthetic Bacteria on the Growth and Quality of Lettuce(Lactuca sativa L.) in a LED-Plant Factory
- Author
-
Ju-Yong Park, Wee Ji-Hyang, Leehyein, Kim sang yong, Min Jiho, and Kim Yang-Hoon
- Subjects
Rhodobacter ,biology ,Plant factory ,food and beverages ,Lactuca ,biology.organism_classification ,chemistry.chemical_compound ,Horticulture ,chemistry ,Dry weight ,Chlorogenic acid ,Carbon dioxide ,Transplanting ,Photosynthetic bacteria - Abstract
Photosynthetic bacteria, Rhodobacter spharoides, can grow using carbon dioxide as a carbon source and produce physiologically active compounds. This study was carried out to investigate the impact of R. sphaeroides extract on the growth and quality of lettuce(Lactuca sativa L.) in the LED-plant factory. The concentrations of R. sphaeroides extracts(0, 4, 8 and 12 mg/L) were supplemented in medium on one day and 14 days after transplanting, respectively. The growth of lettuce as affected by extract amount was evaluated at 14, 28 and 35 days after transplanting and the contents of minerals and chlorogenic acid were analyzed at 35 days after transplanting. As a result, higher growth was obtained in the treatment with R. sphaeroides extract than the control. The extract of R. sphaeroides showed the best growth at 4 mg/L concentration(leaf width- 120%, leaf length- 109%, number of leaves- 113%, total leaf area- 144%, fresh weight- top: 153%, root: 142%, dry weight- top: 137%, root: 120%) and the highest effect at the early stage of growth on 14 days after transplanting(leaf width- 115%, leaf length- 123%, number of leaves- 124%, total leaf area- 158%, fresh weight- top: 139%, root: 120%, dry weight- top: 130%, root: 139%). In addition, the extract of 4 mg/L concentration improved the content of minerals and chlorogenic acid contained in lettuce. Therefore, R. sphaeroides extract suggested the possibility of producing high-value crops through promotion of growth and quality improvement of lettuce.
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- 2020
39. Time-dependent enhancement of fluorescence from Rhodobacter capsulatus SB1003 and its critical dependence on concentration temperature and static magnetic field
- Author
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Anirban Bose, Sanhita Ray, Somen Nandi, Anjan Kr. Dasgupta, Sufi O Raja, Kankan Bhattacharyya, and Rajdeep Chowdhury
- Subjects
0301 basic medicine ,Time Factors ,Photon ,Biophysics ,Context (language use) ,01 natural sciences ,Fluorescence ,Rhodobacter capsulatus ,03 medical and health sciences ,0103 physical sciences ,Singlet state ,Molecular Biology ,Original Paper ,Rhodobacter ,010304 chemical physics ,biology ,Pigmentation ,Chemistry ,Temperature ,Cell Biology ,Magnetostatics ,biology.organism_classification ,Atomic and Molecular Physics, and Optics ,Magnetic Fields ,030104 developmental biology ,Intersystem crossing ,Chemical physics ,Photosynthetic bacteria - Abstract
Continuous exposure of 395 nm light increases the fluorescence emission intensity of photosynthetic purple non-sulphur bacteria, Rhodobacter capsulatus (SB1003). We show that such an increase in fluorescence emission of extracellular pigment complexes (PC) from these photosynthetic bacteria depends on the concentration of the pigment and temperature and can also be modulated by the static magnetic field. The time-dependent enhanced emission disappears either at or below 300 K or below a threshold sample concentration (0.1 mg/ml). The enhanced emission reappears at this condition (T 0). At PC concentration higher than a threshold, k becomes negative if the temperature is lowered. But, surprisingly, at low temperature, a static magnetic field reverts the k value to positive. We explain the logical nature of k-switching and photo-dynamics of the aforesaid microbial fluorescence emission by aggregation of protoporphyrin rings present in the PC. While the simultaneous presence of decay in fluorescence and susceptibility to static magnetic field suggests the dominance of triplet states at low temperatures, the process is reversed by SMF-induced removal of spin degeneracy. At higher temperatures, the optical excitability and lack of magnetic response suggest the dominance of singlet states. We propose that the restructuring of the singlet-triplet distribution by intersystem crossing may be the basis of this logical behaviour. In context with microbial function, time-dependent enhancement of fluorescence also implies relay of red photons to the neighbouring microbes not directly exposed to the incident radiation, thus serving as an indirect photosynthetic regulator. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10867-020-09545-6) contains supplementary material, which is available to authorized users.
- Published
- 2020
40. Bioeffect of static magnetic field on photosynthetic bacteria: Evaluation of bioresources production and wastewater treatment efficiency
- Author
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Han Ting, Guangming Zhang, Xinyu Lin, Haifeng Lu, Xiaodan Wang, Mou He, Hu Shunfan, and Shichao He
- Subjects
Biomass ,02 engineering and technology ,Wastewater ,010501 environmental sciences ,01 natural sciences ,Water Purification ,chemistry.chemical_compound ,020401 chemical engineering ,Environmental Chemistry ,Food science ,Photosynthesis ,0204 chemical engineering ,Waste Management and Disposal ,Carotenoid ,0105 earth and related environmental sciences ,Water Science and Technology ,chemistry.chemical_classification ,Bacteria ,ATP synthase ,biology ,Chemistry ,Ecological Modeling ,NADH dehydrogenase ,Pollution ,Citric acid cycle ,Magnetic Fields ,biology.protein ,Photosynthetic bacteria ,Bacteriochlorophyll - Abstract
Photosynthetic bacteria (PSB) technology is a promising method for biomass, protein, pigments, and other value-added substances generation from wastewater. However, the above bioresources production efficiency is relatively low. In this work, a static magnetic field (SMF) was used to promote bioresources production. Results showed that SMF had positive effects on value-added substances production. With 0.35 Tesla (T) SMF, the PSB biomass, protein, carotenoids, and bacteriochlorophyll concentration were promoted by 31.1%, 22.6%, 56.7%, and 73.1% compared with the control group, respectively. Biomass yield finally reached 0.58 g biomass/g COD removal, which was promoted by 37.1%. The doubling time was shortened by 37.9% in 0.35 T group, showing that SMF can promote cell growth. With 0.35 T SMF, the intracellular NADH dehydrogenase and ATP synthase activities concentration increased by 23.4% and 29.1%, respectively, thus increased the ATP content by 38.0%. Succinic dehydrogenase activity concentration greatly increased by 609.0% at 48 hr, which potentially accelerated the tricarboxylic acid cycle and COD degradation as well as enhanced biomass production. PRACTITIONER POINTS: SMF promoted PSB bioresource production during wastewater treatment processing. Biomass, protein, carotenoids, and Bchl concentration were promoted by 31.1%, 22.6%, 56.7%, and 73.1%, respectively. PSB yield of 0.35 T group was promoted by 37.1% compared with the control group. SDH concentration of 0.35 T was promoted by 609.0% compared with the control group. Increased NADH and ATP synthase activity concentration by SMF enhanced energy metabolism.
- Published
- 2020
41. Bio-hydrogen Production From Vinasse By Using Agent Fermentation Of Photosynthetic Bacteria Rhodobium marinum
- Author
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Khaswar Syamsu, Dwi Susilaningsih, and Nusaibah Nusaibah
- Subjects
lcsh:GE1-350 ,Hydrogen ,Vinasse ,chemistry.chemical_element ,Substrate (chemistry) ,Hydrogen production rate ,chemistry ,lcsh:QH540-549.5 ,Fermentation ,Food science ,Photosynthetic bacteria ,lcsh:Ecology ,lcsh:Environmental sciences ,Rhodobium marinum ,Hydrogen production - Abstract
The aim of this research was to find out the effect of substrate concentrations (COD) of vinasse and the length of fermentation time to bio-hydrogen gas production using agent fermentation of photosynthetic bacteria, Rhodobium marinum. The production of bio-hydrogen was examined by varying COD of vinasse (10,000; 20,000; 30,000; 40,000; 50,000 mg COD/L) at certain fermentation time in the third, sixth and ninth day. The highest Hydrogen gas was obtained at ninth day of fermentation (82.66±18.6 mL). The highest Hydrogen Production Rate (HPR) and COD removal rate were obtained at concentration 50,000 mg COD/L, namely 109.98 mL H2/L/d and 1437.66 mg COD/L/d, respectively. Thus it can be concluded, the concentration of substrates (COD) from vinasse and the length of fermentation time have an effect on production of bio-hydrogen gas using Rhodobium marinum
- Published
- 2020
42. Carotenoids are Probably Involved in Singlet Oxygen Generation in the Membranes of Purple Photosynthetic Bacteria under Light Irradiation
- Author
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Andrey A. Moskalenko, M. A. Bolshakov, A. A. Ashikhmin, and Z. K. Makhneva
- Subjects
chemistry.chemical_classification ,0303 health sciences ,030306 microbiology ,Singlet oxygen ,Photochemistry ,Applied Microbiology and Biotechnology ,Microbiology ,Fluorescence ,03 medical and health sciences ,chemistry.chemical_compound ,Pigment ,Membrane ,chemistry ,visual_art ,visual_art.visual_art_medium ,Photosynthetic bacteria ,Bacteriochlorophyll ,Carotenoid ,Neurosporene ,030304 developmental biology - Abstract
The possibility of singlet oxygen generation in five species of photosynthetic bacteria under irradiation with light was studied using the Singlet Oxygen Sensor Green (SOSG) dye that, when singlet oxygen is bound, is transformed into a fluorescent endoperoxide form. Irradiation was carried out using light of different spectral composition: red (absorption of bacteriochlorophyll, BChl) and white (absorption of BChl and carotenoids). No singlet oxygen generation was detected under red light irradiation, which indicated that BChl was not involved in this process. Under white light, as the irradiation time increased, an increase in SOSG fluorescence was recorded in the membranes of four bacterial species: Allochromatium vinosum MSU, Rhodobacter sphaeroides G1C, Rba. blasticus K-1 and Rhodopseudomonas faecalis. In Rba. sphaeroides, no increase in SOSG fluorescence was observed. It is assumed that in the white light this process occurs due to the pigments that absorb in the blue-green region of the spectrum, i.e. carotenoids with 8‒11 conjugated double bonds (neurosporene, spheroidene, lycopene, and rhodopin). Similar to Trolox, SOSG may slow down the bleaching process of BChl850 in the membranes of Alc. vinosum strain MSU and may therefore effectively perform the role of a singlet oxygen trap.
- Published
- 2020
43. BciC‐Catalyzed C13 2 ‐Demethoxycarbonylation of Metal Pheophorbide a Alkyl Esters
- Author
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Mitsuaki Hirose, Misato Teramura, Hitoshi Tamiaki, and Jiro Harada
- Subjects
chemistry.chemical_classification ,010405 organic chemistry ,Organic Chemistry ,Chlorosome ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,0104 chemical sciences ,Enzyme catalysis ,chemistry.chemical_compound ,chemistry ,Pheophorbide A ,Propionate ,Molecular Medicine ,Photosynthetic bacteria ,Bacteriochlorophyll ,Molecular Biology ,Magnesium ion ,Alkyl - Abstract
Bacteriochlorophyll c molecules self-aggregate to form large oligomers in the core part of chlorosomes, which are the main light-harvesting antenna systems of green photosynthetic bacteria. In the biosynthetic pathway of bacteriochlorophyll c, a BciC enzyme catalyzes the removal of the C132 -methoxycarbonyl group of chlorophyllide a, which possesses a free propionate residue at the C17-position and a magnesium ion as the central metal. The in vitro C132 -demethoxycarbonylations of chlorophyll a derivatives with various alkyl propionate residues and central metals were examined by using the BciC enzyme derived from one green sulfur bacteria species, Chlorobaculum tepidum. The BciC enzymatic reactions of zinc pheophorbide a alkyl esters were gradually suppressed with an increase of the alkyl chain length in the C17-propionate residue (from methyl to pentyl esters) and finally the hexyl ester became inactive for the BciC reaction. Although not only the zinc but also nickel and copper complexes were demethoxycarbonylated by the BciC enzyme, the reactions were largely dependent on the coordination ability of the central metals: Zn>Ni>Cu. The above substrate specificity indicates that the BciC enzyme would not bind directly to the carboxy group of chlorophyllide a, but would bind to its central magnesium to form the stereospecific complex of BciC with chlorophyllide a, giving pyrochlorophyllide a, which lacks the (132 R)-methoxycarbonyl group.
- Published
- 2020
44. Beneficial effect of Rhodopseudomonas palustris on in vitro rumen digestion and fermentation
- Author
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Wei-Kang Wang, Yang Wang, Yong-Yan Chen, Hong-Jian Yang, Xuemeng Si, Zhen-Wei Zhang, Z. J. Cao, and Shuangtao Li
- Subjects
Microbiology (medical) ,chemistry.chemical_classification ,biology ,040301 veterinary sciences ,Chemistry ,0402 animal and dairy science ,food and beverages ,04 agricultural and veterinary sciences ,biology.organism_classification ,040201 dairy & animal science ,Microbiology ,0403 veterinary science ,Rumen ,Animal science ,Propionate ,Dry matter ,Fermentation ,Photosynthetic bacteria ,Rhodopseudomonas palustris ,Digestion ,Incubation - Abstract
As a member of photosynthetic bacteria, Rhodopseudomonas palustris, which has extraordinary metabolic versatility, has been applied as one of potential probiotics in feed industry. To explore whether R. palustris can increase rumen microbial viability and thus improve microbial fermentation, a 2×5 factorial experiment was conducted to evaluate the effect of R. palustris at dose rates of 0, 1.3, 2.6, 3.9, 5.2×106 cfu/ml on ruminal fermentation of two representative total mixed rations (HY, a ration for high-yield (>32 kg/d) lactating cows; LY, a ration for low-yield (48) and total volatile fatty acids (VFA, P48 (P2 proportion in headspace of fermentation system was linearly reduced by 46.1% in LY and 32.9% in HY group, respectively (P
- Published
- 2020
45. Photoactivated Supramolecular Assembly Using 'Caged Chlorophylls' for the Generation of Nanotubular Self-Aggregates Having Controllable Lengths
- Author
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Shogo Matsubara and Hitoshi Tamiaki
- Subjects
Chemistry ,technology, industry, and agriculture ,Supramolecular chemistry ,Chlorosome ,macromolecular substances ,Photochemistry ,Supramolecular assembly ,chemistry.chemical_compound ,Monomer ,Polymerization ,Molecule ,General Materials Science ,Photosynthetic bacteria ,Self-assembly - Abstract
Living supramolecular polymerization is a breakthrough system to control the size of supramolecular aggregates. Multidimensional (2D or 3D) self-aggregates of chiral and unsymmetric molecules are observed in nature. For instance, a chlorosome, which is the main light-harvesting antenna in green photosynthetic bacteria, possesses tubular structures of chlorophyll pigments with J-type slipped cofacial and circular arrangements. Here, we report size-controllable construction of chlorosome-like aggregates by photoactivated supramolecular assembly of “caged chlorophyll”. The caged chlorophylls, which were nonassembling (inert) species, were illuminated with UV-light to give the active species one by one, and then the resulting active monomers spontaneously assembled to construct tubular self-aggregates. The length of such chlorosome-like aggregate tubes was dependent on the UV-irradiation duration and intensity of UV-light. The photoactivated supramolecular assembly system would be useful for application of (o...
- Published
- 2020
46. Biochemical indicators of green photosynthetic bacteria Chlorobium limicola response to Cu(2+) action
- Author
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A. A. Halushka, Feed Additives, Lviv, Ukraine, T. B. Sehin, Y. H. Zaritska, O. D. Maslovska, and S. O. Hnatush
- Subjects
inorganic chemicals ,lcsh:Biochemistry ,Biochemistry ,Chlorobium limicola ,Chemistry ,membrane fluidity ,lcsh:QD415-436 ,Photosynthetic bacteria ,adaptation ,antioxidant protection ,cu cations ,green bacteria - Abstract
Photolithotrophic sulfur bacteria are involved in biota functioning and have a biotechnological potential for bioremediation of contaminated environment, but the mechanisms of xenobiotics, in particular of heavy metal ions damaging action and the pathways of photolithotrophic bacteria adaptation under these conditions have not been established. In this work, the biochemical indicators of green photosynthetic bacteria Chlorobium limicola response to Cu ions were studied. C. limicola cells were incubated during one hour in buffer containing copper (II) sulfate in 0.05–0.5 mM concentrations and grown for 8 days in GSB medium. The content of Cu2+ in cells was estimated by atomic absorption spectroscopy. The activity of enzymes of antioxidant defense, photosynthetic pigments and glutathione content, indexes of lipids unsaturation and membrane viscosity as markers of membrane fluidity were estimated. It was shown that the response of green photosynthetic bacteria C. limicola to Cu2+ action varied depending on cations concentration. Under the influence of metal salt at 0.05 mM concentration, the activity of antioxidant enzymes, GSH/GSSG ratio, the content of photosynthetic pigments and membrane fluidity indexes were higher as compared with control. Under the increase of copper (II) sulfate concentration to 0.25 mM, the activity of antioxidant enzymes was lower compared to the response of the cells under the influence of 0.05 mM copper (II) and the GSSG content was increased. Under the influence of 0.5 mM copper (II) the indexes of membrane fluidity did not differ from the control, but superoxide dismutase and peroxidase activity inhibition and the further decrease of GSH/GSSG ratio were observed followed by the highest Cu2+ cations accumulation in cells and significant decrease of bacteria biomass growth.
- Published
- 2020
47. Artificial photosynthetic assemblies constructed by the self-assembly of synthetic building blocks for enhanced photocatalytic hydrogen evolution
- Author
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Feng Wang, Hongfang Liu, Wu Xia, Ying-Yi Ren, Jun-Chao Hu, Li Huang, Jing Liu, Xuejian Xing, Jin Wu, and Minhuan Lan
- Subjects
chemistry.chemical_classification ,Aqueous solution ,Materials science ,Renewable Energy, Sustainability and the Environment ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,Polymer ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Redox ,0104 chemical sciences ,Catalysis ,chemistry ,Chemical engineering ,mental disorders ,Photocatalysis ,General Materials Science ,Photosynthetic bacteria ,0210 nano-technology ,Cobalt ,psychological phenomena and processes ,Hydrogen production - Abstract
An artificial photosynthetic assembly (APA) of a hollow-rod structure was successfully constructed by using synthetic building blocks to mimic the structure and function of natural photosynthetic bacteria. The APA was formed by the incorporation of carbon nanoparticles as light harvesters into an enzyme-like polymer, PEI-Co, containing cobalt complexes as redox catalytic centres. The APA features a bacteria-like shape of ca. 2–3 μm length rods and a hollow structure positioning photosynthetic components at the surface. The APA integrates key components, the light harvester, redox catalyst, and proton relay group, of photosynthetic systems in assemblies formed from a polymeric framework. The APA system in aqueous solution converts protons to H2 under visible light irradiation with obvious advantages. It exhibits a 50-fold improvement in hydrogen production activity and has a broader pH response of photocatalytic H2 production compared with a non-assembled system.
- Published
- 2020
48. Enhancement of pH values stability and photo-fermentation biohydrogen production by phosphate buffer
- Author
-
Kaixin Wang, Guo Siyi, Chaoyang Lu, Yanyan Jing, Zhiping Zhang, Jian Wang, and Quanguo Zhang
- Subjects
020209 energy ,Kinetics ,Biomass ,Bioengineering ,02 engineering and technology ,Applied Microbiology and Biotechnology ,Phosphates ,chemistry.chemical_compound ,0202 electrical engineering, electronic engineering, information engineering ,Biohydrogen ,Photosynthesis ,biohydrogen production ,Hydrogen production ,phosphate ,chemistry.chemical_classification ,Bacteria ,Chemistry ,photosynthetic bacteria ,General Medicine ,Hydrogen-Ion Concentration ,021001 nanoscience & nanotechnology ,Phosphate ,Reducing sugar ,Fermentation ,Special focus on ABDU-2019 ,Photosynthetic bacteria ,buffer ,initial ph ,0210 nano-technology ,TP248.13-248.65 ,Nuclear chemistry ,Biotechnology - Abstract
The main aim of this study was to investigate the effects of the initial pH values of the buffer on photo-fermentation biohydrogen production. Hydrogen production and the kinetics of it under different initial pH values were analyzed. Effects of initial pH values on reducing sugar consumption, hydrogen production rate, and byproduct production were evaluated at initial pH values of 5–7. The results showed that initial pH values of phosphate buffer had a significant effect on biohydrogen production via photo-fermentation. With the initial pH value of phosphate buffer at 6.0, the cumulative hydrogen production reached its maximum, 569.6 mL. The maximum hydrogen production rate was 23.96 mL/h at the initial pH value of 6.5. With the initial pH values at 5.0 and 7.5, the maximum hydrogen production rates were becoming lower, only 5.59 mL/h and 5.42 mL/h, respectively. And with the increase in pH values, the peak period of hydrogen production was gradually delayed, indicating that the alkaline environment had a negative effect on the ability of photosynthetic bacteria. This study revealed the influence of phosphate buffer initial pH values on the biohydrogen production via photo-fermentation and aimed to provide a scientific reference for further improving the theory and technology for biohydrogen production from biomass., Graphical Abstract
- Published
- 2020
49. Confined encapsulation of living cells in self-assembled fiber macrospheres with micro/nanoporous polymer shells for the transformation of contaminants to green energy
- Author
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Lei Qin, Guoliang Zhang, Yinghua Lu, Liang Shen, Chang Li, Xiong Li, Xu Zhang, Qin Meng, and Chong Shen
- Subjects
chemistry.chemical_classification ,Materials science ,Renewable Energy, Sustainability and the Environment ,Nanoporous ,Environmental pollution ,Nanotechnology ,02 engineering and technology ,General Chemistry ,Polymer ,engineering.material ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Encapsulation (networking) ,chemistry ,Coating ,engineering ,General Materials Science ,Photosynthetic bacteria ,0210 nano-technology ,Cell encapsulation ,Reusability - Abstract
The encapsulation of living cells in the transformation of contaminants into green energy has great potential for solving energy and environmental pollution problems. However, some unresolved challenges related to the maintenance of the capsules' mechanical stability, biomass harvesting without leaking and necessary high activities hinder its practicability. Here, we develop a novel “interior division-external capsulation” dual-immobilization method to anchor photosynthetic bacteria into self-assembled fiber macrospheres and coating with polymer layers by phase inversion. The functional sites (C–N, C–OH and N–H) of the modified macrospheres cause more cells to adhere in the cage and its large void volume provides sufficient space for cell harvesting. Micro/nanoporous polymer shells can not only facilitate the rapid diffusion of substrates into the cavity, but also effectively reduce cell leakage. This strategy provides a facile method to significantly enhance the chemical/physical stability of the host and quickly achieve much higher activity of the encapsulated cells in the degradation of organics and H2 production as compared to free cells. Importantly, the core–shell confined encapsulation concept enables the cells to have considerable salt tolerance as high as 80 g L−1 and wide pH stability. The long-term reusability of the self-assembled macrospheres provides extensive application prospects for cell encapsulation as a clean and sustainable alternative in broader fields.
- Published
- 2020
50. Effects of Light on Saccharide Wastewater Treatment and Resource Recovery by Proteiniphilum acetatigenes PSB-W
- Author
-
Xiaoli Gao and Qingping Hu
- Subjects
Pollutant ,Light intensity ,Wastewater ,Chemistry ,Light Cycle ,Chemical oxygen demand ,Biomass ,Sewage treatment ,Photosynthetic bacteria ,Pulp and paper industry - Abstract
Photosynthetic bacteria (PSB) wastewater treatment is a new method with great resource recovery potential. In order to improve the biomass and valuable resources of bacteria in the wastewater treatment of photosynthetic bacteria, the effects of different light conditions on the efficiency of Proteiniphilum acetatigenes PSB-W in the treatment of sugar wastewater and the production of bacteria and carotenoids in the wastewater were analyzed from three aspects of light source, light intensity and light period. Under the principle of priority of pollutant removal efficiency, the red LED light was selected with the light intensity of 4000 Lux, 16L (light):8D (dark) for light cycle, and the best efficiency of wastewater removal and bacterial yield were obtained when the culture time was 3d, Chemical oxygen demand (COD) removal rate was 80.9%, bacterial OD600 was 0.907 ± 0.023, carotenoid yield was 7.83 ± 0.27 mg/L, respectively. These results show that PSB-W strains can provide more biomass and valuable substances in suitable environment. It provides a theoretical basis for the realization of wastewater recycling.
- Published
- 2020
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