1. A high-throughput mass spectrometry-based assay for large-scale profiling of circulating human apolipoproteins[S]
- Author
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Mikaël Croyal, Amada Torres, Catherine Jaunet, Gilles Lambert, Kévin Chemello, Michel Krempf, Kalyane Bach-Ngohou, Cédric Le May, Matthieu Pichelin, Audrey Aguesse, Edith Bigot-Corbel, Stéphanie Billon-Crossouard, Samy Hadjadj, Gilles Famchon, Aya Garfa, Valentin Blanchard, Bertrand Cariou, Damien Garçon, unité de recherche de l'institut du thorax UMR1087 UMR6291 (ITX), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), Université de Nantes (UN)-Université de Nantes (UN), ANR-16-RHUS-0007,ANR-16-RHUS-0007,CHOPIN(2016), Diabète athérothrombose et thérapies Réunion Océan Indien (DéTROI), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de La Réunion (UR), Centre hospitalier universitaire de Nantes (CHU Nantes), Physiopathologie des Adaptations Nutritionnelles (PhAN), Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), Université de Nantes (UN)-Université de Nantes (UN)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Mass Spectrometry Core Facility [Nantes] (CRNH-O ), Centre de Recherche en Nutrition Humaine Ouest [UNIV Nantes] (CRNHO), Université de Nantes (UN), The Enteric Nervous System in gut and brain disorders [U1235] (TENS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), and ANR-16-RHUS-0007,CHOPIN,CHOPIN(2016)
- Subjects
0301 basic medicine ,Apolipoprotein E ,assay development ,Apolipoprotein B ,Peptide ,serum lipid ,QD415-436 ,030204 cardiovascular system & hematology ,Mass spectrometry ,Proteomics ,Biochemistry ,Mass Spectrometry ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,proteomics ,[SDV.MHEP.CSC]Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular system ,Limit of Detection ,lipid metabolism ,medicine ,Methods ,[SDV.MHEP.PHY]Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO] ,Humans ,isotopic labeling ,ComputingMilieux_MISCELLANEOUS ,chemistry.chemical_classification ,lipoprotein metabolism ,Reproducibility ,Chromatography ,biology ,[SDV.MHEP.HEG]Life Sciences [q-bio]/Human health and pathology/Hépatology and Gastroenterology ,Cell Biology ,Repeatability ,plasma lipid ,[SDV.MHEP.EM]Life Sciences [q-bio]/Human health and pathology/Endocrinology and metabolism ,Trypsin ,metabolic disease ,030104 developmental biology ,Apolipoproteins ,chemistry ,biology.protein ,Blood Chemical Analysis ,medicine.drug ,Chromatography, Liquid - Abstract
International audience; Apolipoproteins govern lipoprotein metabolism and are promising biomarkers of metabolic and cardiovascular diseases. Unlike immunoassays, MS enables the quantification and phenotyping of multiple apolipoproteins. Hence, here, we aimed to develop a LC-MS/MS assay that can simultaneously quantitate 18 human apolipoproteins [A-I, A-II, A-IV, A-V, B48, B100, C-I, C-II, C-III, C-IV, D, E, F, H, J, L1, M, and (a)] and determined apoE, apoL1, and apo(a) phenotypes in human plasma and serum samples. The plasma and serum apolipoproteins were trypsin digested through an optimized procedure and peptides were extracted and analyzed by LC-MS/MS. The method was validated according to standard guidelines in samples spiked with known peptide amounts. The LC-MS/MS results were compared with those obtained with other techniques, and reproducibility, dilution effects, and stabilities were also assessed. Peptide markers were successfully selected for targeted apolipoprotein quantification and phenotyping. After optimization, the assay was validated for linearity, lower limits of quantification, accuracy (biases: -14.8% to 12.1%), intra-assay variability [coefficients of variation (CVs): 1.5-14.2%], and inter-assay repeatability (CVs: 4.1-14.3%). Bland-Altman plots indicated no major statistically significant differences between LC-MS/MS and other techniques. The LC-MS/MS results were reproducible over five repeated experiments (CVs: 1.8-13.7%), and we identified marked differences among the plasma and serum samples. The LC-MS/MS assay developed here is rapid, requires only small sampling volumes, and incurs reasonable costs, thus making it amenable for a wide range of studies of apolipoprotein metabolism. We also highlight how this assay can be implemented in laboratories.
- Published
- 2020
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