141 results on '"Liisa, Viikari"'
Search Results
2. Impact of Xylan on Synergistic Effects of Xylanases and Cellulases in Enzymatic Hydrolysis of Lignocelluloses
- Author
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Junhua Zhang and Liisa Viikari
- Subjects
animal structures ,Xylan (coating) ,Bioengineering ,macromolecular substances ,Cellulase ,Lignin ,Zea mays ,Applied Microbiology and Biotechnology ,Biochemistry ,Fungal Proteins ,chemistry.chemical_compound ,Hydrolysis ,Enzymatic hydrolysis ,Food science ,Cellulose ,Molecular Biology ,chemistry.chemical_classification ,Endo-1,4-beta Xylanases ,biology ,Chemistry ,technology, industry, and agriculture ,food and beverages ,General Medicine ,carbohydrates (lipids) ,Corn stover ,Enzyme ,biology.protein ,Xylanase ,Xylans ,Biotechnology - Abstract
Supplementation of xylanase (XYL) has been found to synergistically improve the performance of cellulases (CEL) in the hydrolysis of lignocelluloses. However, the effect of xylan on the synergistic effects of XYL and CEL is still unclear. In this work, the effect of xylan on the synergy between CEL and XYL was investigated. Xylan content in corn stover was generally a good indicator of the degree of the synergism between CEL and XYL. Strongest synergism was observed in the hydrolysis of cellulose in corn stover with the highest xylan contents. A more evident synergistic effect of CEL in xylan hydrolysis was observed in the substrates with low original xylan content. It was also found that the ratio of cellulose to xylan in substrates correlated to the synergism between the two types of enzymes. The results indicated that supplementation of XYL with CEL was most effective in the hydrolysis of corn stover with the highest xylan content. For efficient enzymatic hydrolysis of lignocelluloses, both cellulases and xylanase were important because cellulose and xylan coved each other and these enzymes could improve their performance each other in the hydrolysis of cellulose and xylan in lignocelluloses.
- Published
- 2014
3. The role of carbohydrate binding module (CBM) at high substrate consistency: Comparison of Trichoderma reesei and Thermoascus aurantiacus Cel7A (CBHI) and Cel5A (EGII)
- Author
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Terhi Puranen, Anikó Várnai, Annukka Pakarinen, Tinaïg Le Costaouec, and Liisa Viikari
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0106 biological sciences ,Environmental Engineering ,Bioengineering ,Cellulase ,01 natural sciences ,Substrate Specificity ,03 medical and health sciences ,Hydrolysis ,chemistry.chemical_compound ,Bacterial Proteins ,010608 biotechnology ,Enzymatic hydrolysis ,Lignin ,Glycoside hydrolase ,Waste Management and Disposal ,Trichoderma reesei ,030304 developmental biology ,Trichoderma ,chemistry.chemical_classification ,0303 health sciences ,biology ,Renewable Energy, Sustainability and the Environment ,Chemistry ,food and beverages ,General Medicine ,biology.organism_classification ,Enzyme ,Biochemistry ,biology.protein ,Carbohydrate Metabolism ,Thermoascus ,Adsorption ,Carbohydrate-binding module - Abstract
The role of CBM in two fungal model cellulase systems, consisting of Cel7A and Cel5A, from Trichoderma reesei and Thermoascus aurantiacus , were compared in the hydrolysis of various substrates. For comparison, family-1 CBM’s were introduced to the T. aurantiacus and removed from the T. reesei enzymes. Especially at high dry matter consistencies of lignocellulosic substrates, pretreated wheat straw and spruce, the T. aurantiacus enzymes lacking CBM outperformed the enzymes carrying the CBM. In these conditions, the CBM-less enzymes from both organisms obviously recognized and bound to the substrate at higher probability than in dilute systems. Avoiding the unproductive binding to lignin caused by the CBMs obviously enhanced the hydrolytic performance. The lignin binding effect was, however, not entirely caused by the CBM, but also by the different structures and affinities of the core enzymes to lignin. Due to decreased binding, the CBM-less enzymes would allow reuse, potentially decreasing hydrolysis costs.
- Published
- 2013
4. Small-angle scattering study of structural changes in the microfibril network of nanocellulose during enzymatic hydrolysis
- Author
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Paavo A. Penttilä, Inkeri Kontro, Ville Liljeström, Peter Lindner, Liisa Viikari, Anikó Várnai, Ritva Serimaa, Matti Siika-aho, and Manuel Fernández
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Materials science ,Polymers and Plastics ,SANS ,Small-angle X-ray scattering ,enzymatic hydrolysis ,SAXS ,macromolecular substances ,Xylan ,cellulose ,Nanocellulose ,chemistry.chemical_compound ,Hydrolysis ,Chemical engineering ,chemistry ,hemicellulase ,Enzymatic hydrolysis ,Organic chemistry ,Hemicellulose ,Microfibril ,Cellulose ,bioethanol - Abstract
The hydrolysis of nanofibrillated cellulose (NFC), consisting of individual cellulose fibrils, was followed using small-angle scattering techniques in order to reveal changes in the substrate structure caused by cellulose degrading enzymes. In particular, the nanoscale structure of the network of cellulose fibrils was characterized with the combination of small-angle neutron scattering and small-angle x-ray scattering. In the nanocellulose with higher xylan content, the interfibrillar distance was shown to remain unchanged during enzymatic degradation, whereas the distance increased in the nanocellulose with lower xylan content. The limiting effect of xylan on the hydrolysis and a faster hydrolysis of the more thoroughly fibrillated segments of the NFC network could be observed. Despite the extensive fibrillation of the raw material, however, the hydrolysis was eventually limited by the aggregated and heterogeneous structure of the substrate.
- Published
- 2013
5. Xylan as limiting factor in enzymatic hydrolysis of nanocellulose
- Author
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Anikó Várnai, Jaakko Pere, Matti Siika-aho, Lennart Salmén, Ritva Serimaa, Paavo A. Penttilä, Tekla Tammelin, and Liisa Viikari
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0106 biological sciences ,animal structures ,Environmental Engineering ,Bioengineering ,macromolecular substances ,02 engineering and technology ,Cellulase ,engineering.material ,01 natural sciences ,Nanocellulose ,chemistry.chemical_compound ,Hydrolysis ,010608 biotechnology ,Enzymatic hydrolysis ,Organic chemistry ,Hemicellulose ,Particle Size ,Cellulose ,Waste Management and Disposal ,biology ,Renewable Energy, Sustainability and the Environment ,Pulp (paper) ,technology, industry, and agriculture ,food and beverages ,General Medicine ,021001 nanoscience & nanotechnology ,Enzyme Activation ,carbohydrates (lipids) ,chemistry ,Xylanase ,engineering ,biology.protein ,Nanoparticles ,Xylans ,0210 nano-technology ,Protein Binding - Abstract
The role of xylan as a limiting factor in the enzymatic hydrolysis of cellulose was studied by hydrolysing nanocellulose samples prepared by mechanical fibrillation of birch pulp with varying xylan content. Analyzing the nanocelluloses and their hydrolysis residues with dynamic FT-IR spectroscopy revealed that a certain fraction of xylan remained tightly attached to cellulose fibrils despite partial hydrolysis of xylan with xylanase prior to pulp fibrillation and that this fraction remained in the structure during the hydrolysis of nanocellulose with cellulase mixture as well. Thus, a loosely bound fraction of xylan was predicted to have been more likely removed by purified xylanase. The presence of loosely bound xylan seemed to limit the hydrolysis of crystalline cellulose, indicated by an increase in cellulose crystallinity and by preserved crystal width measured with wide-angle X-ray scattering. Removing loosely bound xylan led to a proportional hydrolysis of xylan and cellulose with the cellulase mixture.
- Published
- 2013
6. Synergy between cellulases and pectinases in the hydrolysis of hemp
- Author
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Annukka Pakarinen, Junhua Zhang, and Liisa Viikari
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0106 biological sciences ,Environmental Engineering ,food.ingredient ,Pectin ,Low dosage ,020209 energy ,Bioengineering ,02 engineering and technology ,Cellulase ,complex mixtures ,01 natural sciences ,Hydrolysis ,food ,010608 biotechnology ,Enzymatic hydrolysis ,0202 electrical engineering, electronic engineering, information engineering ,Cannabis chemistry ,Food science ,Pectinase ,Waste Management and Disposal ,Cannabis ,Endo-1,4-beta Xylanases ,biology ,Plant Extracts ,Renewable Energy, Sustainability and the Environment ,Chemistry ,food and beverages ,General Medicine ,humanities ,Enzyme Activation ,Steam ,Polygalacturonase ,Solubility ,Biochemistry ,Xylanase ,biology.protein ,Pectins - Abstract
The impact of pectinases in the hydrolysis of fresh, steam-exploded and ensiled hemp was investigated and the synergy between cellulases, pectinases and xylanase in the hydrolysis was evaluated. About half; 59.3% and 46.1% of pectin in the steam-exploded and ensiled hemp, respectively, could be removed by a low dosage of pectinases used. Pectinases were more efficient than xylanase in the hydrolysis of fresh and ensiled hemp whereas xylanase showed higher hydrolytic efficiency than the pectinase preparation used in the hydrolysis of steam-exploded hemp. Clear synergistic action between cellulases and xylanase could be observed in the hydrolysis of steam-exploded hemp. Supplementation of pectinase resulted in clear synergism with cellulases in the hydrolysis of all hemp substrates. Highest hydrolysis yield of steam-exploded hemp was obtained in the hydrolysis with cellulases and xylanase. In the hydrolysis of ensiled hemp, the synergistic action between cellulases and pectinases was more obvious for efficient hydrolysis.
- Published
- 2013
7. Reed canary grass as a feedstock for 2nd generation bioethanol production
- Author
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Niklas von Weymarn, Katri Pahkala, Anne Kallioinen, Jaana Uusitalo, Markku Kontturi, Liisa Viikari, and Matti Siika-aho
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Environmental Engineering ,Carbohydrates ,Bioengineering ,Cellulase ,Hydrolysis ,hemic and lymphatic diseases ,Enzymatic hydrolysis ,Ethanol fuel ,Phalaris ,Food science ,Waste Management and Disposal ,Canary grass ,Chromatography, High Pressure Liquid ,Trichoderma reesei ,Xylose ,Ethanol ,biology ,Renewable Energy, Sustainability and the Environment ,Beta-glucosidase ,Chemistry ,enzymatic hydrolysis ,food and beverages ,simultaneous saccharification and fermentation ,General Medicine ,pretreatment ,Straw ,biology.organism_classification ,Steam ,Glucose ,reed canary grass ,Agronomy ,Biofuels ,Barley straw ,Fermentation ,biology.protein - Abstract
The enzymatic hydrolysis and fermentation of reed canary grass, harvested in the spring or autumn, and barley straw were studied. Steam pretreated materials were efficiently hydrolysed by commercial enzymes with a dosage of 10–20 FPU/g d.m. Reed canary grass harvested in the spring was hydrolysed more efficiently than the autumn-harvested reed canary grass. Additional β-glucosidase improved the release of glucose and xylose during the hydrolysis reaction. The hydrolysis rate and level of reed canary grass with a commercial Trichoderma reesei cellulase could be improved by supplementation of purified enzymes. The addition of CBH II improved the hydrolysis level by 10% in 48 hours’ hydrolysis. Efficient mixing was shown to be important for hydrolysis already at 10% dry matter consistency. The highest ethanol concentration (20 g/l) and yield (82%) was obtained with reed canary grass at 10% d.m. consistency.
- Published
- 2012
8. Xylans inhibit enzymatic hydrolysis of lignocellulosic materials by cellulases
- Author
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Ming Tang, Junhua Zhang, and Liisa Viikari
- Subjects
0106 biological sciences ,animal structures ,Environmental Engineering ,020209 energy ,Bioengineering ,02 engineering and technology ,Cellobiose ,Cellulase ,Lignin ,01 natural sciences ,Nanocellulose ,Hydrolysis ,chemistry.chemical_compound ,010608 biotechnology ,Enzymatic hydrolysis ,0202 electrical engineering, electronic engineering, information engineering ,Cellulases ,Organic chemistry ,Cellulose ,Waste Management and Disposal ,Betula ,Triticum ,Trichoderma reesei ,Trichoderma ,biology ,Renewable Energy, Sustainability and the Environment ,technology, industry, and agriculture ,food and beverages ,General Medicine ,Chromatography, Ion Exchange ,biology.organism_classification ,Xylan ,carbohydrates (lipids) ,chemistry ,Biochemistry ,biology.protein ,Thermoascus ,Xylans - Abstract
Hemicelluloses have been found to be physical barriers in the hydrolysis of cellulose, and prevent the access of enzymes to cellulose surface. In addition, soluble hemicelluloses may strongly inhibit the cellulase activity. In this work, birchwood xylan clearly inhibited the enzymatic hydrolysis of wheat straw, Avicel and nanocellulose by cellulases. Hydrolysis efficiencies of cellobiohydrolase I (CBHI, from Thermoascus aurantiacus), cellobiohydrolase II (CBHII, from Trichoderma reesei) and endoglucanase II (from T. aurantiacus) were clearly inhibited by birchwood xylan, respectively. The strongest inhibitory effect of birchwood xylan was observed on the hydrolysis of Avicel by CBHI and CBHII, as a dramatically decreased formation of the main product, cellobiose. After additions of soluble and insoluble oat spelt xylan, cleaved cellobiose units by CBHI from cellulose chain decreased from 8 to 4 and 6, respectively. The results in this work demonstrated that xylans clearly inhibited the hydrolysis efficiencies of both endoglucanase and cellobiohydrolase.
- Published
- 2012
9. Enzymatic accessibility of fiber hemp is enhanced by enzymatic or chemical removal of pectin
- Author
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Liisa Viikari, T. Brock, Annukka Pakarinen, Pekka Maijala, and Junhua Zhang
- Subjects
0106 biological sciences ,Environmental Engineering ,food.ingredient ,Pectin ,020209 energy ,Biomass ,Bioengineering ,02 engineering and technology ,Raw material ,7. Clean energy ,01 natural sciences ,Hydrolysis ,food ,010608 biotechnology ,Enzymatic hydrolysis ,0202 electrical engineering, electronic engineering, information engineering ,Anaerobiosis ,Food science ,Pectinase ,Waste Management and Disposal ,Cannabis ,Steam explosion ,2. Zero hunger ,Renewable Energy, Sustainability and the Environment ,Chemistry ,food and beverages ,General Medicine ,Enzymes ,Biochemistry ,Stalk ,Microscopy, Electron, Scanning ,Pectins - Abstract
Pectinolytic enzymes, steam explosion and alkaline treatment were used to assess the role of pectin for the accessibility of hydrolytic enzymes in the enzymatic hydrolysis of biomass. Hemp (Cannabis sativa L.), a potential energy crop especially in boreal climate with a low need of fertilizers, was used in the study either as untreated or anaerobically preserved raw material. Addition of pectinases increased the hydrolysis yield by 26%, 54%, and 64% from the theoretical carbohydrates of untreated, acid, and alkali-preserved materials, respectively. Steam explosion and hot alkali treatment increased the conversion of the total carbohydrates by 78% and 60%, respectively, compared to the untreated hemp. Elevated separation of cells within the hemp stalk tissues and an increased surface area was revealed after hot alkali or pectinase treatments, contributing to the increased conversion to sugars by commercial enzymes.
- Published
- 2012
10. Characterization of hemicellulases from thermophilic fungi
- Author
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Pekka Maijala, Nóra Szijártó, Naveen Kango, and Liisa Viikari
- Subjects
Dietary Fiber ,Hot Temperature ,food.ingredient ,Glycoside Hydrolases ,Pectin ,Cellulase ,Microbiology ,Mannans ,food ,Glycoside hydrolase ,Aspergillus terreus ,Molecular Biology ,Thermostability ,Bran ,biology ,Chemistry ,Thermophile ,Fungi ,Galactose ,food and beverages ,General Medicine ,biology.organism_classification ,Carbon ,Biochemistry ,biology.protein ,Xylanase ,Pectins - Abstract
The thermophilic fungi Thermomyces lanuginosus, Malbranchea cinnamomea, Myceliophthora fergusii and the thermotolerant Aspergillus terreus were cultivated on various carbon sources, and hemicellulolytic and cellulolytic enzyme profiles were evaluated. All fungi could grow on locust bean galactomannan (LBG), Solka floc, wheat bran and pectin, except T. lanuginosus, which failed to utilize LBG for growth. Different levels of cellulase and hemicellulase activities were produced by these fungal strains. Depending on the carbon source, variable ratios of thermostable hydrolytic enzymes were obtained, which may be useful in various applications. All strains were found to secrete xylanolytic and mannanolytic enzymes. Generally, LBG was the most efficient carbon source to induce mannanase activities, although T. lanuginosus was able to produce mannanase only on wheat bran as a carbon source. Xylanolytic activities were usually highest on wheat bran medium, but in contrast to other investigated fungi, xylanase production by M. fergusii was enhanced on pectin medium. Preliminary thermostability screening indicated that among the investigated species, thermotolerant glycosidases can be found. Some of the accessory activities, including the α-arabinosidase activity, were surprisingly high. The capability of the produced enzymes to improve the hydrolysis of lignocellulosic pretreated substrate was evaluated and revealed potential for these enzymes.
- Published
- 2012
11. Action of fungal laccases on lignin model compounds in organic solvents
- Author
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Paula Nousiainen, Maija-Liisa Mattinen, Jussi Kontro, Jussi Sipilä, Pekka Maijala, Janne Asikkala, and Liisa Viikari
- Subjects
0106 biological sciences ,lignan ,lignin ,Bioengineering ,Ether ,Trametes hirsuta ,01 natural sciences ,Biochemistry ,Redox ,solvent ,Catalysis ,laccase ,03 medical and health sciences ,chemistry.chemical_compound ,Chaetomium thermophilum ,010608 biotechnology ,Lignin ,Organic chemistry ,030304 developmental biology ,Laccase ,0303 health sciences ,biology ,Chemistry ,Process Chemistry and Technology ,stability ,biology.organism_classification ,Solvent ,reactivity ,Polymerization - Abstract
The stability and reactivity of five different thermostable fungal laccases from the species Trametes hirsuta, Melanocarpus albomyces, Thielavia arenaria (two laccases) and Chaetomium thermophilum were investigated in the presence of organic solvents. Oxidations of small organic phenolic compounds, matairesinol and 7-hydroxymatairesinol lignans, as well as synthetic lignin dehydrogenation polymer DHP in aqueous solutions of ethanol and propylene glycol solvents were investigated using analysis of oxidation rates, high performance liquid chromatography and size-exclusion chromatography. The laccases showed variability in their solvent tolerance. The redox potential of the laccases appeared not to be the main factor determining the efficiency of the polymerization reactions of complex phenolic model compounds in aqueous organic solutions. Nuclear magnetic resonance spectroscopic analysis of laccase treated DHP in 50% propylene glycol indicated that the formation of new biphenylic 5–5′ structures was favored in laccase-catalyzed radical coupling reactions over the other possible reactions through the phenolic groups forming new 5—O—4 ether bonds. The polymerization reactions took place even at high concentrations of solvents, which already inhibited the enzyme activity, encouraging enzymatic upgrading of lignin in organic solvents to be studied further. Thus, it was confirmed that thermostable laccases are potential enzymes for various industrial applications where organic solvents are required for the reaction systems.
- Published
- 2012
12. Synergistic action of xylanase and mannanase improves the total hydrolysis of softwood
- Author
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Jaakko Pere, Laura Huikko, Anikó Várnai, Liisa Viikari, and Matti Siika-aho
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0106 biological sciences ,Environmental Engineering ,Glucomannan ,Bioengineering ,Cellulase ,Polysaccharide ,01 natural sciences ,Lignin ,Mannans ,03 medical and health sciences ,chemistry.chemical_compound ,Hydrolysis ,lignocellulose ,Polysaccharides ,010608 biotechnology ,Enzymatic hydrolysis ,synergism ,Cellulases ,Hemicellulose ,Food science ,Waste Management and Disposal ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,xylanase ,biology ,Renewable Energy, Sustainability and the Environment ,General Medicine ,Xylan ,Wood ,Xylosidases ,chemistry ,Biochemistry ,biology.protein ,Xylanase ,Xylans ,mannanase - Abstract
The impact of xylan and glucomannan hydrolysis on cellulose hydrolysis was studied on five pretreated softwood substrates with different xylan and glucomannan contents, both varying from 0.2% to 6.9%, using mixtures of purified enzymes. The supplementation of pure cellulase mixture with non-specific endoglucanase TrCel7B and xylanase TrXyn11 enhanced the hydrolysis of all substrates, except the steam pretreated spruce, by more than 50%. The addition of endo-β-mannanase increased the overall hydrolysis yield by 20–25%, liberating significantly more glucose than theoretically present in glucomannan. When supplemented together, xylanolytic and mannanolytic enzymes acted synergistically with cellulases. Moreover, a linear correlation was observed between the hydrolysis of polysaccharides, irrespective of the composition, indicating that glucomannan and xylan form a complex network of polysaccharides around the cellulosic fibres extending throughout the lignocellulosic matrix. Both hemicellulolytic enzymes are crucial as accessory enzymes when designing efficient mixtures for the total hydrolysis of lignocellulosic substrates containing both hemicelluloses.
- Published
- 2011
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13. Adsorption of monocomponent enzymes in enzyme mixture analyzed quantitatively during hydrolysis of lignocellulose substrates
- Author
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Anikó Várnai, Kaisa Marjamaa, Liisa Viikari, and Matti Siika-aho
- Subjects
0106 biological sciences ,Environmental Engineering ,Purified enzymes ,Bioengineering ,Cellulase ,Lignin ,01 natural sciences ,Substrate Specificity ,03 medical and health sciences ,Hydrolysis ,010608 biotechnology ,Enzymatic hydrolysis ,Cellulases ,Organic chemistry ,Enzyme adsorption ,Waste Management and Disposal ,Trichoderma reesei ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Endo-1,4-beta Xylanases ,Chromatography ,biology ,Renewable Energy, Sustainability and the Environment ,beta-Glucosidase ,Aspergillus niger ,Substrate (chemistry) ,General Medicine ,biology.organism_classification ,Enzymes ,Enzyme ,chemistry ,Xylanase ,biology.protein ,Electrophoresis, Polyacrylamide Gel ,Adsorption ,Lignocellulose - Abstract
The adsorption of purified Trichoderma reesei cellulases (TrCel7A, TrCel6A and TrCel5A) and xylanase TrXyn11 and Aspergillus niger β-glucosidase AnCel3A was studied in enzyme mixture during hydrolysis of two pretreated lignocellulosic materials, steam pretreated and catalytically delignified spruce, along with microcrystalline cellulose (Avicel). The enzyme mixture was compiled to resemble the composition of commercial cellulase preparations. The hydrolysis was carried out at 35 °C to mimic the temperature of the simultaneous saccharification and fermentation (SSF). Enzyme adsorption was followed by analyzing the activity and the protein amount of the individual free enzymes in the hydrolysis supernatant. Most enzymes adsorbed quickly at early stages of the hydrolysis and remained bound throughout the hydrolysis, although the conversion reached was fairly high. Only with the catalytically oxidized spruce samples, the bound enzymes started to be released as the hydrolysis degree reached 80%. The results based on enzyme activities and protein assay were in good accordance.
- Published
- 2011
14. Inhibition of enzymatic hydrolysis by residual lignins from softwood
- Author
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Kaisa Marjamaa, Angelos A. Lappas, Liisa Viikari, Jenni Rahikainen, Kristiina Kruus, Tarja Tamminen, and Saara Mikander
- Subjects
0106 biological sciences ,Softwood ,denaturation ,Trichoderma reesei ,Bioengineering ,Electrophoretic Mobility Shift Assay ,Cellulase ,macromolecular substances ,01 natural sciences ,Applied Microbiology and Biotechnology ,Lignin ,complex mixtures ,03 medical and health sciences ,Hydrolysis ,chemistry.chemical_compound ,lignocellulose ,Polysaccharides ,010608 biotechnology ,Enzymatic hydrolysis ,Organic chemistry ,Cellulases ,Enzyme Inhibitors ,030304 developmental biology ,Trichoderma ,0303 health sciences ,cellulase ,biology ,Beta-glucosidase ,fungi ,Temperature ,technology, industry, and agriculture ,food and beverages ,enzymatic hydrolysis ,biology.organism_classification ,Wood ,Enzyme binding ,chemistry ,biology.protein ,Electrophoresis, Polyacrylamide Gel ,softwood lignin ,Biotechnology ,cellulase adsorption - Abstract
Lignin‐derived inhibition is a major obstacle restricting the enzymatic hydrolysis of cell wall polysaccharides especially with softwood lignocellulosics. Enzyme adsorption on lignin is suggested to contribute to the inhibitory effect of lignin. The interaction of cellulases with softwood lignin was studied in the present work with commercial Trichoderma reesei cellulases (Celluclast) and lignin‐rich residues isolated from steam pretreated softwood (SPS) by enzymatic and acid hydrolysis. Both lignin preparations inhibited the hydrolysis of microcrystalline cellulose (Avicel) and adsorbed the major cellulases present in the commercial cellulase mixture. The adsorption phenomenon was studied at low temperature (4°C) and at the typical hydrolysis temperature (45°C) by following activities of free and lignin‐bound enzymes. Severe inactivation of the lignin‐bound enzymes was observed at 45°C, however at 4°C the enzymes retained well their activity. Furthermore, SDS–PAGE analysis of the lignin‐bound enzymes indicated that very strong interactions form between the residue and the enzymes at 45°C, because the enzymes were not released from the residue in the electrophoresis. These results suggest that heat‐induced denaturation may take place on the surface of softwood lignin at the hydrolysis temperature.
- Published
- 2011
15. Oxidation of lignans and lignin model compounds by laccase in aqueous solvent systems
- Author
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Stefan Willför, Annika Smeds, Liisa Viikari, Jussi Sipilä, Maija-Liisa Mattinen, Jussi Kontro, Pekka Maijala, Tarja Tamminen, and Paula Nousiainen
- Subjects
0106 biological sciences ,Size-exclusion chromatography ,lignin ,Bioengineering ,Alcohol ,01 natural sciences ,Biochemistry ,solvent ,Catalysis ,laccase ,chemistry.chemical_compound ,010608 biotechnology ,Acetone ,Lignin ,Organic chemistry ,Solubility ,Aqueous solution ,010405 organic chemistry ,Process Chemistry and Technology ,lignans ,0104 chemical sciences ,Solvent ,reactivity ,chemistry ,Polymerization ,dehydrogenation polymers ,Melanocarpus albomyces - Abstract
The stability and activity of the low redox potential Melanocarpus albomyces laccase (MaL) in various aqueous organic (acetone, ethanol, propylene glycol, diethylene glycol monomethyl ether) solvent systems was studied spectrophotometrically using 2,6-dimethoxyphenol (2,6-DMP) as substrate. In addition, reactivity of the enzyme with two lignans; matairesinol (MR) and 7-hydroxymatairesinol (HMR), was examined by oxygen consumption measurements in the most potential aqueous organic solvent systems. Polymerization of the lignans by MaL was verified by matrix assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) and size exclusion chromatography (SEC). Polymerization of the higher molecular weight lignin model compound, dehydrogenation polymers (DHPs), was studied by SEC. The solubilities of industrial softwood and hardwood kraft lignins were evaluated as parameters for investigation of enzymatic modification in aqueous organic solvent systems. The functioning of MaL in different aqueous organic media was excellent. Propylene glycol and diethylene glycol monomethyl ether were better solvents than ethanol or acetone in enzymatic oxidations. Even though they were the best solvents for enzyme oxidation, ethanol and propylene glycol were selected for further tests because of their different physicochemical properties. The results obtained in this study for the use of laccase-catalysed reactions in organic solvents to improve the efficiency of lignin oxidation may be exploited in several applications and areas in which the solubility of the reactants or products is a limiting factor.
- Published
- 2011
16. Restriction of the enzymatic hydrolysis of steam-pretreated spruce by lignin and hemicellulose
- Author
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Matti Siika-aho, Liisa Viikari, and Anikó Várnai
- Subjects
0106 biological sciences ,hydrolysis limitation ,020209 energy ,Bioengineering ,02 engineering and technology ,Cellulase ,01 natural sciences ,Applied Microbiology and Biotechnology ,Biochemistry ,chemistry.chemical_compound ,Hydrolysis ,lignocellulose ,010608 biotechnology ,Enzymatic hydrolysis ,0202 electrical engineering, electronic engineering, information engineering ,Lignin ,Organic chemistry ,Hemicellulose ,Cellulose ,Trichoderma reesei ,cellulase ,xylanase ,delignification ,biology ,enzymatic hydrolysis ,food and beverages ,biology.organism_classification ,cellulose ,chemistry ,biology.protein ,Xylanase ,spruce ,Biotechnology - Abstract
The presence of lignin is known to reduce the efficiency of the enzymatic hydrolysis of lignocellulosic raw materials. On the other hand, solubilization of hemicellulose, especially of xylan, is known to enhance the hydrolysis of cellulose. The enzymatic hydrolysis of spruce, recognized among the most challenging lignocellulosic substrates, was studied by commercial and purified enzymes from Trichoderma reesei. Previously, the enzymatic hydrolysis of steam pretreated spruce has been studied mainly by using commercial enzymes and no efforts have been taken to clarify the bottlenecks by using purified enzyme components.Steam-pretreated spruce was hydrolyzed with a mixture of Celluclast and Novozym 188 to obtain a hydrolysis residue, expectedly containing the most resistant components. The pretreated raw material and the hydrolysis residue were analyzed for the enrichment of structural bottlenecks during the hydrolysis. Lignin was removed from these two materials with chlorite delignification method in order to eliminate the limitations caused by lignin. Avicel was used for comparison as a known model substrate. Mixtures of purified enzymes were used to investigate the hydrolysis of the individual carbohydrates: cellulose, glucomannan and xylan in the substrates. The results reveal that factors limiting the hydrolysis are mainly due to the lignin, and to a minor extent by the lack of accessory enzymes. Removal of lignin doubled the hydrolysis degree of the raw material and the residue, and reached close to 100% of the theoretical within 2 days. The presence of xylan seems to limit the hydrolysability, especially of the delignified substrates. The hydrolysis results also revealed significant hemicellulose impurities in the commonly used cellulose model substrate, making it questionable to use Avicel as a model cellulose substrate for hydrolysis experiments.
- Published
- 2010
17. Characterisation of specific activities and hydrolytic properties of cell-wall-degrading enzymes produced by Trichoderma reesei Rut C30 on different carbon sources
- Author
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Kati Réczey, Matti Siika-aho, Dóra Dienes, Liisa Viikari, Zsuzsa Benko, and Bálint Sipos
- Subjects
Glycoside Hydrolases ,Bioengineering ,Cellulase ,Applied Microbiology and Biotechnology ,Biochemistry ,Accessory enzymes ,Fungal Proteins ,Industrial Microbiology ,Hydrolysis ,Cellulase fermentation ,Cell Wall ,Enzymatic hydrolysis ,Glucans ,Molecular Biology ,Trichoderma reesei ,Glucan ,Trichoderma ,chemistry.chemical_classification ,Endo-1,4-beta Xylanases ,biology ,beta-Glucosidase ,food and beverages ,General Medicine ,biology.organism_classification ,Wood ,Xylan ,Carbon ,Xylan Endo-1,3-beta-Xylosidase ,Corn stover ,chemistry ,Trichoderma reesei Rut C30 ,Fermentation ,biology.protein ,Xylanase ,Xylans ,Hemicellulases ,Biotechnology - Abstract
Conversion of lignocellulosic substrates is limited by several factors, in terms of both the enzymes and the substrates. Better understanding of the hydrolysis mechanisms and the factors determining their performance is crucial for commercial lignocelluloses-based processes. Enzymes produced on various carbon sources (Solka Floc 200, lactose and steam-pre-treated corn stover) by Trichoderma reesei Rut C30 were characterised by their enzyme profile and hydrolytic performance. The results showed that there was a clear correlation between the secreted amount of xylanase and mannanase enzymes and that their production was induced by the presence of xylan in the carbon source. Co-secretion of α-arabinosidase and α-galactosidase was also observed. Secretion of β-glucosidase was found to be clearly dependent on the composition of the carbon source, and in the case of lactose, 2-fold higher specific activity was observed compared to Solka Floc and steam-pre-treated corn stover. Hydrolysis experiments showed a clear connection between glucan and xylan conversion and highlighted the importance of β-glucosidase and xylanase activities. When hydrolysis was performed using additional purified β-glucosidase and xylanase, the addition of β-glucosidase was found to significantly improve both the xylan and glucan conversion.
- Published
- 2010
18. Hydrolysis of amorphous and crystalline cellulose by heterologously produced cellulases of Melanocarpus albomyces
- Author
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Jari Vehmaanperä, Matti Siika-aho, Kati Réczey, Marika Alapuranen, Nóra Szijártó, Liisa Viikari, and Maija Tenkanen
- Subjects
0106 biological sciences ,Bioengineering ,Cellulase ,01 natural sciences ,Applied Microbiology and Biotechnology ,law.invention ,Fungal Proteins ,03 medical and health sciences ,chemistry.chemical_compound ,Hydrolysis ,Ascomycota ,law ,010608 biotechnology ,Amorphous cellulose ,Cellulose ,Trichoderma reesei ,030304 developmental biology ,chemistry.chemical_classification ,cellulase ,0303 health sciences ,Chromatography ,biology ,Substrate (chemistry) ,General Medicine ,biology.organism_classification ,Recombinant Proteins ,crystalline cellulose ,Amorphous solid ,Kinetics ,Enzyme ,hydrolysis ,chemistry ,biology.protein ,Recombinant DNA ,Electrophoresis, Polyacrylamide Gel ,Crystallization ,Melanocarpus albomyces ,Biotechnology - Abstract
Three thermostable neutral cellulases from Melanocarpus albomyces, a 20-kDa endoglucanase (Cel45A), a 50-kDa endoglucanase (Cel7A), and a 50-kDa cellobiohydrolase (Cel7B) heterologously produced in a recombinant Trichoderma reesei were purified and studied in hydrolysis (50 °C, pH 6.0) of crystalline and amorphous cellulose. To improve their efficiency, M. albomyces cellulases naturally harboring no cellulose-binding module (CBM) were genetically modified to carry the CBM of T. reesei CBHI/Cel7A, and were studied under similar experimental conditions. Hydrolysis performance and product profiles were used to evaluate hydrolytic features of the investigated enzymes.Each cellulase proved to be active against the tested substrates; the cellobiohydrolase Cel7B had greater activity than the endoglucanases Cel45A and Cel7A against crystalline cellulose, whereas in the case of amorphous substrate the order was reversed. Evidence of synergism was observed when mixtures of the novel enzymes were applied in a constant total protein dosage. Presence of the CBM improved the hydrolytic potential of each enzyme in all experimental configurations; it had a greater effect on the endoglucanases Cel45A and Cel7A than the cellobiohydrolase Cel7B, especially against crystalline substrate. The novel cellobiohydrolase performed comparably to the major cellobiohydrolase of T. reesei (CBHI/Cel7A) under the applied experimental conditions.
- Published
- 2008
19. Development of a printable laccase-based biocathode for fuel cell applications
- Author
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Robert Roozeman, Xia-Chang Zhang, Matti Valkiainen, Jan-Erik Eriksson, Anu Koivula, Liisa Viikari, Harry Boer, Mikael Bergelin, and Maria Smolander
- Subjects
Enzyme electrode ,Bioengineering ,Trametes hirsuta ,Applied Microbiology and Biotechnology ,Biochemistry ,Redox ,law.invention ,law ,ink ,Organic chemistry ,carbon nanotube ,oxidoreductase ,Laccase ,biology ,Chemistry ,Open-circuit voltage ,biology.organism_classification ,Cathode ,Anode ,enzyme ,printing ,Chemical engineering ,biofuel cell ,Electrode ,mediator ,Biotechnology - Abstract
Laccases belong to the family of blue multicopper oxidases, which catalyze the four-electron reduction of dioxygen to water concomitantly through the oxidation of phenolic and other aromatic compounds. They are potential enzymes in many applications including biofuel cells to produce electricity through chemical reactions. We have tested here the incorporation of a high redox potential laccase from Trametes hirsuta in different types of conducting inks to produce dry printed enzyme electrode layers. ABTS was used as the redox mediator to shuttle the electrons between the surface of the cathodic electrode and the enzyme active sites. Our results demonstrate that the dry printed layers maintained their enzymatic activity even after several months. Furthermore, fuel cell prototypes could be constructed utilising an optimized printed laccase–ABTS layer as the cathode, and printed Zn layer as the anode. Under humidity controlled conditions, a cell voltage between 0.8 and 0.6 V could be maintained for several days under a 2.2 kΩ load. In addition, a corresponding stand-alone cell could be constructed where the cell voltage was maintained for 15 h under a load. These results offer a good starting point for further development of mass-producible, completely enzymatic printed biofuel cells.
- Published
- 2008
20. Evaluation of the role of xyloglucanase in the enzymatic hydrolysis of lignocellulosic substrates
- Author
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Kati Réczey, Zsuzsa Benko, Liisa Viikari, and Matti Siika-aho
- Subjects
biology ,Trichoderma reesei ,Xyloglucanase ,Bioengineering ,Enzymatic saccharification ,Cellulase ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Biochemistry ,Xyloglucan ,Cell wall ,chemistry.chemical_compound ,Hydrolysis ,chemistry ,Cellulosic ethanol ,Lignocellulases ,Enzymatic hydrolysis ,biology.protein ,Cellulases ,Cellulose ,Biotechnology - Abstract
Xyloglucan is one of the major components in the primary cell wall of higher plants. It is intimately associated with cellulose chains, forming the load-bearing network of the cell wall. Enzymatic degradation of the xyloglucan polymer by xyloglucanases could potentially improve the overall hydrolysis of lignocellulosic substrates by enabling cellulases to hydrolyze the cellulose polymer more efficiently due to the increased surface area. In order to evaluate the role of xyloglucan in the enzymatic hydrolysis of lignocelluloses, 11 different pretreated cellulosic substrates were hydrolyzed using different combinations of purified cellobiohydrolases I and II, endoglucanase II, xyloglucanases of Trichoderma reesei and Aspergillus β-glucosidase. Xyloglucanase activity improved the total hydrolysis of lignocellulosic substrates in general. These results indicate that this enzyme can be used to enhance total hydrolysis, especially in cases when pretreatment of the lignocellulosic substrate is not optimal.
- Published
- 2008
21. Cloning, expression, and characterization of novel thermostable family 7 cellobiohydrolases
- Author
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Anu Koivula, Marika Alapuranen, Jarno Kallio, Jari Vehmaanperä, Arja Lappalainen, Sanni Voutilainen, Liisa Viikari, Matti Siika-aho, Satu Hooman, Terhi Puranen, and Department of Food and Nutrition
- Subjects
Models, Molecular ,Cellobiose ,Hot Temperature ,Trichoderma reesei ,education ,Bioengineering ,Cellulase ,Chaetomium ,Applied Microbiology and Biotechnology ,03 medical and health sciences ,Hydrolysis ,chemistry.chemical_compound ,Chaetomium thermophilum ,cellobiohydrolase ,Enzyme Stability ,Cellulose 1,4-beta-Cellobiosidase ,Thermoascus aurantiacus ,Cloning, Molecular ,Enzyme Inhibitors ,Cellulose ,030304 developmental biology ,Trichoderma ,0303 health sciences ,Binding Sites ,biology ,030306 microbiology ,Thermophile ,Eurotiales ,biology.organism_classification ,Recombinant Proteins ,cellulose ,Protein Structure, Tertiary ,Acremonium ,Biochemistry ,chemistry ,biology.protein ,Acremonium thermophilum ,118 Biological sciences ,Biotechnology - Abstract
As part of the effort to find better cellulases for bioethanol production processes, we were looking for novel GH‐7 family cellobiohydrolases, which would be particularly active on insoluble polymeric substrates and participate in the rate‐limiting step in the hydrolysis of cellulose. The enzymatic properties were studied and are reported here for family 7 cellobiohydrolases from the thermophilic fungi Acremonium thermophilum, Thermoascus aurantiacus, and Chaetomium thermophilum. The Trichoderma reesei Cel7A enzyme was used as a reference in the experiments. As the native T. aurantiacus Cel7A has no carbohydrate‐binding module (CBM), recombinant proteins having the CBM from either the C. thermophilum Cel7A or the T. reesei Cel7A were also constructed. All these novel acidic cellobiohydrolases were more thermostable (by 4–10°C) and more active (two‐ to fourfold) in hydrolysis of microcrystalline cellulose (Avicel) at 45°C than T. reesei Cel7A. The C. thermophilum Cel7A showed the highest specific activity and temperature optimum when measured on soluble substrates. The most effective enzyme for Avicel hydrolysis at 70°C, however, was the 2‐module version of the T. aurantiacus Cel7A, which was also relatively weakly inhibited by cellobiose. These results are discussed from the structural point of view based on the three‐dimensional homology models of these enzymes.
- Published
- 2008
22. Laccase-catalysed functionalisation of TMP with tyramine
- Author
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Raimo Alén, Liisa Viikari, Johanna Buchert, Maija-Liisa Mattinen, Stina Grönqvist, and Kari Rantanen
- Subjects
Softwood ,Radical ,Laccases ,Trametes hirsuta ,Photochemistry ,Coupling reaction ,law.invention ,Biomaterials ,Surface modification ,law ,Functionalisation of fibres ,Organic chemistry ,ESCA (XPS) ,SDG 7 - Affordable and Clean Energy ,Fourier transform infrared spectroscopy ,Electron paramagnetic resonance ,Laccase ,biology ,Chemistry ,Lifetime of radicals ,Activation of fibres ,biology.organism_classification ,FTIR ,EPR - Abstract
Modified wood fibres open new perspectives to create value-added products based on renewable raw materials. An interesting option is the targeted modification of fibre surfaces by oxidative enzymes. This two-stage functionalisation method consists of enzymatic activation of fibre surfaces followed by addition of radicalised compounds reacting preferentially by radical coupling. In this work, the activation of bleached and unbleached softwood TMPs with laccase isolated from Trametes hirsuta was studied. The formation and stability of the radicals were studied by EPR spectroscopy. The reaction of the radicals with 3-hydroxytyramine hydrochloride and the type of chemical linkages were investigated. EPR, ESCA and FTIR spectroscopy were used for analysis. Bleached TMP was radicalised more efficiently than unbleached TMP. The radicals were unstable, as 90% of them were quenched within a few hours. Their lifetime was, however, found to be adequately long for performing coupling reactions. Bonding of new compounds to pulps via radical reactions thus seems to be possible.
- Published
- 2006
23. Characterization of cellulases and hemicellulases produced by Trichoderma reesei on various carbon sources
- Author
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Liisa Viikari, Zs. Szengyel, T. Juhász, Matti Siika-aho, and Kati Réczey
- Subjects
acetyl xylan esterase ,Trichoderma reesei ,Bioengineering ,Cellulase ,Applied Microbiology and Biotechnology ,Biochemistry ,Mannanase ,alpha-Glucosidase ,Hydrolysis ,corn stover ,Hemicellulase ,Food science ,Endoglucanase ,chemistry.chemical_classification ,biology ,Xylanase ,Substrate (chemistry) ,food and beverages ,alpha-Arabinosidase ,Hypocrea jecorina ,biology.organism_classification ,Enzyme assay ,alpha-Xylosidase ,Enzyme ,Corn stover ,chemistry ,alpha-Galactosidase ,biology.protein - Abstract
Cellulase and hemicellulase enzymes were produced by Trichoderma reesei RUT C30 on steam pretreated spruce, willow, corn stover and delignified lignocellulose (Solka Floc), as a reference. The enzymes produced were characterized by protein and various enzyme activity measurements. On steam pretreated corn stover higher cellulolytic enzyme activities were reached than on Solka Floc, while the activities obtained on steam pretreated spruce and willow were considerably lower. The produced and two commercial cellulases (Celluclast 1.5 L and Econase CE) were compared by determining specific activities. There were minor differences among the enzymes corresponding to their specific cellulase activities. In contrast, within hemicellulase and β-glucosidase activities, the differences were found to be more significant. It should be also noted that commercial cellulases had considerably higher specific acetyl xylan esterase activities than the produced enzymes. According to subsequent hydrolysis experiments, performed to characterize the produced enzyme complexes to evaluate their applicability for hydrolysis and enzyme production, it seems that the application of the enzyme that was produced on the same substrate as was used for hydrolysis can be advantageous in the case of some substrates. As a result, these experiments demonstrated that pretreated corn stover is a good substrate both for enzyme production and hydrolysis, since high cellulolytic activities could be reached using it as carbon source. Moreover, high sugar yields could be obtained in the hydrolysis by the enzyme produced on steam pretreated corn stover.
- Published
- 2005
24. Oxidation of milled wood lignin with laccase, tyrosinase and horseradish peroxidase
- Author
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Marja-Leena Niku-Paavola, Johanna Buchert, Carmen Canevali, Stina Grönqvist, Marco Orlandi, Liisa Viikari, Gronqvist, S, Viikari, L, Niku Paavola, M, Orlandi, M, Canevali, C, and Buchert, J
- Subjects
oxidation ,Radical ,Tyrosinase ,enzymes ,lignin ,Pulp ,tyrosinase ,Lignin ,Applied Microbiology and Biotechnology ,Horseradish peroxidase ,laccase ,Enzyme catalysis ,Gel permeation chromatography ,chemistry.chemical_compound ,milled wood lignin ,CHIM/06 - CHIMICA ORGANICA ,Organic chemistry ,Fiber ,Catalyzed Oxidation ,Horseradish Peroxidase ,Laccase ,biology ,horseradish peroxidase ,Monophenol Monooxygenase ,Reactivity ,food and beverages ,Model Compound ,Hydrogen Peroxide ,General Medicine ,Wood ,Oxygen ,Phanerochaete-Chrysosporium ,chemistry ,biology.protein ,Oxidase ,Oxidation-Reduction ,Biotechnology ,Peroxidase - Abstract
In this paper the oxidation of milled wood lignin (MWL), catalysed by three enzymes, i.e. laccase, tyrosinase and horseradish peroxidase (HRP) was studied. The oxidation was followed by measuring the consumption of O2 during laccase and tyrosinase treatment and of H2O2 during HRP treatment. Both laccase and HRP were found to oxidise lignin effectively, whereas the effect of tyrosinase was negligible. The changes in MWL molecular-weight distributions caused in the reactions were analysed by gel permeation chromatography. Both laccase and HRP treatments were found to polymerise MWL. Peroxidase treatment was found to decrease the amount of phenolic hydroxyls in MWL, whereas no such effect could be detected in the laccase-treated sample. Both laccase and HRP treatments were, however, found to increase the amount of conjugated structures in MWL. The formation of phenoxy radicals during the treatments was studied by electron paramagnetic resonance spectroscopy. Phenoxy radicals were detected in both laccase and HRP-treated samples. The amount of the formed phenoxy radicals was found to be essentially constant during the detected time (i.e. 20–120 min after the addition of enzyme).
- Published
- 2004
25. Laccase fromMelanocarpus albomycesbinds effectively to cellulose
- Author
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Kristiina Kruus, Liisa Viikari, Laura-Leena Kiiskinen, Markus Linder, and Hetti Palonen
- Subjects
Langmuir ,Biophysics ,Cellulase ,Trametes hirsuta ,Biochemistry ,Substrate Specificity ,Melanocarpus albomyces laccase ,Fungal Proteins ,chemistry.chemical_compound ,Adsorption ,Ascomycota ,Structural Biology ,Genetics ,Organic chemistry ,Cellulose ,Molecular Biology ,Laccase ,Bacterial microcrystalline cellulose ,biology ,Chemistry ,Cell Biology ,Cellulose binding ,biology.organism_classification ,Recombinant Proteins ,Microcrystalline cellulose ,Models, Chemical ,biology.protein ,Protein Binding - Abstract
This presentation demonstrates that a laccase from the thermophilic fungus Melanocarpus albomyces binds effectively to lignocellulose, Avicel and bacterial microcrystalline cellulose (BMCC). Binding to cellulose has previously been demonstrated for enzymes involved in the modification of lignocellulose, however, the adsorption of a laccase on pure cellulose has not been reported before. Binding on lignin was also studied but no adsorption on alkali lignin was observed. A binding isotherm was established with bacterial microcrystalline cellulose. The data points fitted the Langmuir type one-site binding model well, and the binding parameters for maximum binding capacity (Bmax) and relative partition coefficient (Kp) were calculated from the isotherm. The Bmax of 1.94 mol/g was relatively low, as compared to the values for various cellulases, whereas the Kp of 320 1/g, which describes the binding affinity, was clearly higher than the values reported for cellulases. The combination of high affinity and quite low capacity of binding suggests that M. albomyces laccase is able to bind very effectively to BMCC, but only on relatively few binding sites. Furthermore, the binding was shown to be reversible and not influenced by non-specific, protein or 0.1-0.5 M Na2SO4. The binding of T. hirsuta and Mauginiella sp. laccases was also studied. No adsorption was detected on BMCC or softwood, suggesting that adsorption onto cellulose is not a general feature among laccases.
- Published
- 2004
26. Enzymatically polymerized phenolic compounds as wood preservatives
- Author
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Marjaana Rättö, Anne-Christine Ritschkoff, and Liisa Viikari
- Subjects
chemistry.chemical_classification ,Laccase ,Preservative ,Softwood ,Chemistry ,Vanillin ,technology, industry, and agriculture ,enzymatic polymerization ,Biodegradation ,complex mixtures ,tannin ,laccase ,Biomaterials ,chemistry.chemical_compound ,Polymerization ,vanillin ,non-leachable ,Tannin ,Organic chemistry ,Food science ,Leaching (metallurgy) ,wood preservation - Abstract
Phenolic compounds were studied as natural preservatives against wood decaying fungi. Vanillin and tannin decreased the growth of the test organisms Coniophora puteana and Coriolus versicolor and decreased the weight losses caused by these organisms in wood blocks. Both compounds were, however, leached in standard washing tests, and higher weight losses were observed in leached samples. Enzymatic polymerization with laccase was used as a means of binding the phenolic preservatives into the wood. Using an optimized laccase dosage, wood impregnation with enzymatically polymerized vanillin reduced the weight loss by C. puteana from 25% to 5%.
- Published
- 2004
27. Regioselective deacetylation of cellulose acetates by acetyl xylan esterases of different CE-families
- Author
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Craig B. Faulds, Matti Siika-aho, Peter Biely, Maija Tenkanen, Bodo Saake, Liisa Viikari, Jürgen Puls, Clemens M. Altaner, and Jaime Eyzaguirre
- Subjects
Acetyl xylan esterase ,Magnetic Resonance Spectroscopy ,Stereochemistry ,Cellulose acetate ,Bioengineering ,01 natural sciences ,Applied Microbiology and Biotechnology ,Esterase ,CE families ,Substrate Specificity ,03 medical and health sciences ,chemistry.chemical_compound ,Cellulose ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,010405 organic chemistry ,Regioselectivity ,Acetylation ,General Medicine ,Carbohydrate ,Xylan ,0104 chemical sciences ,Enzyme ,chemistry ,Regioselective deacetylation ,Acetylesterase ,13C-NMR-spectroscopy ,Biotechnology - Abstract
Cellulose acetate (CA) was found to be a substrate of several acetyl xylan esterases (AXE). Eight AXE from different carbohydrate esterase (CE) families were tested on their activity against CA with a degree of substitution of 0.7 and 1.4. The classification of the AXEs into CE families according to their structure by hydrophobic cluster analysis followed clearly their activity against CA. Within the same CE family similar, and between the CE families different deacetylation behaviours could be observed. Furthermore, each esterase family showed a distinct regioselective mode of action. The CE 1 family enzymes regioselectively cleaved the substituents in C2- and C3-position, while CE 5 family enzymes only cleaved the acetyl groups in C2-position. CE 4 family enzymes seemed to interact only with the substituents in C3-position. Evidence was found that the deacetylation reaction of the CE 1 family enzymes proceeded faster in C2- than in C3-position of CA. The enzymes were able to cleave acetyl groups from fully substituted anhydroglucose units.
- Published
- 2003
28. Effects of bacterial treatments on wood extractives
- Author
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Liisa Viikari, Matti Siika-aho, Jonas Konn, Anne Kallioinen, Marjaana Rättö, and Anu Vaari
- Subjects
Paper ,Microbial metabolism ,Industrial Waste ,Bioengineering ,lipophilic wood extractives ,Applied Microbiology and Biotechnology ,Bioreactors ,Nutrient ,Species Specificity ,Pseudomonas ,Botany ,Wood degradation ,Plant metabolism ,Food science ,Picea ,Biopulping, lipophilic wood extractives ,Bacteria ,biology ,Plant Extracts ,Chemistry ,Water pollutants ,General Medicine ,Biodegradation ,biology.organism_classification ,Wood ,Pitch ,Biodegradation, Environmental ,Norway spruce ,Rahnella ,Biopulping ,Resins, Plant ,Water Pollutants, Chemical ,Biotechnology - Abstract
Bacterial strains were isolated from spruce wood chips and their ability to reduce the content of wood extractives was studied. Strains were screened by cultivation on liquid media containing wood extractives as the major nutrient. Some bacterial species could decrease remarkably the amount of extractives in the liquid media and reduced the amount of triglycerides, steryl esters and total extractives by 100, 20 and 39%, respectively. Spruce wood chips were treated in controlled conditions with selected bacteria to test their effects on the chips. All the bacteria grew well on wood chips. The effect of bacterial metabolism on wood extractives was significant. Bacterial treatments reduced the amount of lipophilic extractives by 16-38% in 1 week of treatment and up to 67% in 2 weeks. The most efficient strain removed 90, 66 and 50% of triglycerides, steryl esters and resin acids, respectively, in 2 weeks. These results indicate that bacteria may be promising agents for the removal of extractives for improved pulping and papermaking processes.
- Published
- 2003
29. Purification, characterization and sequence analysis of a laccase from the ascomycete Mauginiella sp
- Author
-
Liisa Viikari, Hetti Palonen, Kristiina Kruus, and Markku Saloheimo
- Subjects
Laccase ,chemistry.chemical_classification ,ABTS ,biology ,Molecular mass ,Sequence analysis ,Characterization ,Bioengineering ,Mauginiella sp ,Gene sequence ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Biochemistry ,Amino acid sequence ,chemistry.chemical_compound ,Enzyme ,Isoelectric point ,chemistry ,Guaiacol ,Purification ,Biotechnology ,Trametes versicolor - Abstract
A laccase from the ascomycete Mauginiella sp. was purified to electrophoretic homogeneity and biochemically characterized. The molecular mass of the laccase was 63 kDa as determined by mass spectrometry and it existed as six isoforms with isoelectric points in the range of 4.8–6.4. The laccase showed activity towards the typical substrates: 2,2′-azinobis-(3-ethylbenzothiazoline)-6-sulphonate (ABTS), guaiacol, dimethoxyphenol (2,6-DMP), and syringaldazine. The pH optima on guaiacol, 2,6-DMP and ABTS were 4, 3.5 and 2.4, respectively. The enzyme was strongly, 98%, inhibited by 1 mM NaN3 and 88% by 1 mM KCN. The laccase was stable at neutral pH, retaining 80% activity after 24 h at pH 6–8. The enzyme was sensitive to high temperatures: the half-life at 70 °C was only 3 min. A fragment of the laccase gene was isolated and its nucleotide sequence was determined. The laccase gene showed high identity to the laccase genes lcc1 and lcc2 of the basidiomycetes Trametes versicolor and Trametes villosa, respectively.
- Published
- 2003
30. Competitive inhibition of cellobiohydrolase I by manno-oligosaccharides
- Author
-
Xiaoyan Ge, Liisa Viikari, Donglin Xin, Junhua Zhang, and Zongping Sun
- Subjects
0106 biological sciences ,animal structures ,Mannose ,Oligosaccharides ,chemical and pharmacologic phenomena ,Bioengineering ,Cellulase ,01 natural sciences ,Applied Microbiology and Biotechnology ,Biochemistry ,Binding, Competitive ,Mannans ,03 medical and health sciences ,chemistry.chemical_compound ,Hydrolysis ,Structure-Activity Relationship ,Bacterial Proteins ,010608 biotechnology ,Enzymatic hydrolysis ,Mannobiose ,Cellulose 1,4-beta-Cellobiosidase ,Cellulose ,Trichoderma reesei ,030304 developmental biology ,Mannan ,0303 health sciences ,biology ,bacterial infections and mycoses ,biology.organism_classification ,carbohydrates (lipids) ,chemistry ,biology.protein ,Thermoascus ,Trisaccharides ,Biotechnology - Abstract
In the hydrolysis of softwood, significant amounts of manno-oligosaccharides (MOS) are released from mannan, the major hemicelluloses in softwood. However, the impact of MOS on the performance of cellulases is not yet clear. In this work, the effect of mannan and MOS in cellulose hydrolysis by cellulases, especially cellobiohydrolase I (CBHI) from Thermoascus aurantiacus (Ta Cel7A), was studied. The glucose yield of Avicel decreased with an increasing amount of added mannan. Commercial cellulases contained mannan hydrolysing enzymes, and β-glucosidase played an important role in mannan hydrolysis. Addition of 10 mg/ml mannan reduced the glucose yield of Avicel (at 20 g/l) from 40.1 to 24.3%. No inhibition of β-glucosidase by mannan was observed. The negative effects of mannan and MOS on the hydrolytic action of cellulases indicated that the inhibitory effect was at least partly attributed to the inhibition of Ta Cel7A (CBHI), but not on β-glucosidase. Kinetic experiments showed that MOS were competitive inhibitors of the CBHI from T. aurantiacus , and mannobiose had a stronger inhibitory effect on CBHI than mannotriose or mannotetraose. For efficient hydrolysis of softwood, it was necessary to add supplementary enzymes to hydrolyze both mannan and MOS to less inhibitory product, mannose.
- Published
- 2014
31. Cellulases without carbohydrate-binding modules in high consistency ethanol production process
- Author
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Terhi Puranen, Demi T. Djajadi, Anikó Várnai, Liisa Viikari, Annukka Pakarinen, Mai Østergaard Haven, and Department of Food and Nutrition
- Subjects
CBM ,DOMAINS ,ADSORPTION ,education ,INHIBITION ,Cellulase ,Management, Monitoring, Policy and Law ,Applied Microbiology and Biotechnology ,chemistry.chemical_compound ,Hydrolysis ,Recyclability ,SOLIDS ENZYMATIC-HYDROLYSIS ,Cellulases ,CELLOBIOHYDROLASE-I ,Ethanol fuel ,CRYSTALLINE CELLULOSE ,TEMPERATURE ,Trichoderma reesei ,High consistency ,219 Environmental biotechnology ,chemistry.chemical_classification ,Ethanol ,biology ,Renewable Energy, Sustainability and the Environment ,Chemistry ,Research ,Substrate (chemistry) ,LIMITED PROTEOLYSIS ,biology.organism_classification ,Complementation ,TRICHODERMA-REESEI ,General Energy ,Enzyme ,Biochemistry ,Cellobiohydrolases ,biology.protein ,1182 Biochemistry, cell and molecular biology ,Carbohydrate-binding modules ,Lignocellulose ,Biotechnology - Abstract
Background Enzymes still comprise a major part of ethanol production costs from lignocellulose raw materials. Irreversible binding of enzymes to the residual substrate prevents their reuse and no efficient methods for recycling of enzymes have so far been presented. Cellulases without a carbohydrate-binding module (CBM) have been found to act efficiently at high substrate consistencies and to remain non-bound after the hydrolysis. Results High hydrolysis yields could be obtained with thermostable enzymes of Thermoascus aurantiacus containing only two main cellulases: cellobiohydrolase I (CBH I), Cel7A and endoglucanase II (EG II), Cel5A. The yields were decreased by only about 10% when using these cellulases without CBM. A major part of enzymes lacking CBM was non-bound during the most active stage of hydrolysis and in spite of this, produced high sugar yields. Complementation of the two cellulases lacking CBM with CBH II (CtCel6A) improved the hydrolysis. Cellulases without CBM were more sensitive during exposure to high ethanol concentration than the enzymes containing CBM. Enzymes lacking CBM could be efficiently reused leading to a sugar yield of 90% of that with fresh enzymes. The applicability of cellulases without CBM was confirmed under industrial ethanol production conditions at high (25% dry matter (DM)) consistency. Conclusions The results clearly show that cellulases without CBM can be successfully used in the hydrolysis of lignocellulose at high consistency, and that this approach could provide new means for better recyclability of enzymes. This paper provides new insight into the efficient action of CBM-lacking cellulases. The relationship of binding and action of cellulases without CBM at high DM consistency should, however, be studied in more detail.
- Published
- 2014
32. Mechanisms of laccase-mediator treatments improving the enzymatic hydrolysis of pre-treated spruce
- Author
-
Ulla Moilanen, Martina Andberg, Anikó Várnai, Liisa Viikari, and Miriam Kellock
- Subjects
lignin ,Cellulase ,Management, Monitoring, Policy and Law ,01 natural sciences ,Applied Microbiology and Biotechnology ,laccase ,03 medical and health sciences ,Hydrolysis ,chemistry.chemical_compound ,Enzymatic hydrolysis ,Organic chemistry ,Lignin ,Cellulose ,030304 developmental biology ,Laccase ,0303 health sciences ,ABTS ,biology ,010405 organic chemistry ,Renewable Energy, Sustainability and the Environment ,enzymatic hydrolysis ,cellulose oxidation ,0104 chemical sciences ,Enzyme binding ,General Energy ,chemistry ,Biochemistry ,biology.protein ,mediator ,Research Article ,Biotechnology ,spruce - Abstract
Background The recalcitrance of softwood to enzymatic hydrolysis is one of the major bottlenecks hindering its profitable use as a raw material for platform sugars. In softwood, the guaiacyl-type lignin is especially problematic, since it is known to bind hydrolytic enzymes non-specifically, rendering them inactive towards cellulose. One approach to improve hydrolysis yields is the modification of lignin and of cellulose structures by laccase-mediator treatments (LMTs). Results LMTs were studied to improve the hydrolysis of steam pre-treated spruce (SPS). Three mediators with three distinct reaction mechanisms (ABTS, HBT, and TEMPO) and one natural mediator (AS, that is, acetosyringone) were tested. Of the studied LMTs, laccase-ABTS treatment improved the degree of hydrolysis by 54%, while acetosyringone and TEMPO increased the hydrolysis yield by 49% and 36%, respectively. On the other hand, laccase-HBT treatment improved the degree of hydrolysis only by 22%, which was in the same order of magnitude as the increase induced by laccase treatment without added mediators (19%). The improvements were due to lignin modification that led to reduced adsorption of endoglucanase Cel5A and cellobiohydrolase Cel7A on lignin. TEMPO was the only mediator that modified cellulose structure by oxidizing hydroxyls at the C6 position to carbonyls and partially further to carboxyls. Oxidation of the reducing end C1 carbonyls was also observed. In contrast to lignin modification, oxidation of cellulose impaired enzymatic hydrolysis. Conclusions LMTs, in general, improved the enzymatic hydrolysis of SPS. The mechanism of the improvement was shown to be based on reduced adsorption of the main cellulases on SPS lignin rather than cellulose oxidation. In fact, at higher mediator concentrations the advantage of lignin modification in enzymatic saccharification was overcome by the negative effect of cellulose oxidation. For future applications, it would be beneficial to be able to understand and modify the binding properties of lignin in order to decrease unspecific enzyme binding and thus to increase the mobility, action, and recyclability of the hydrolytic enzymes. Electronic supplementary material The online version of this article (doi:10.1186/s13068-014-0177-8) contains supplementary material, which is available to authorized users.
- Published
- 2014
33. Screening of micro-organisms for decolorization of melanins produced by bluestain fungi
- Author
-
Anne-Christine Ritschkoff, Marjaana Rättö, M. Chatani, and Liisa Viikari
- Subjects
Melanins ,Bacteria ,biology ,Chemistry ,Color ,Geotrichum ,General Medicine ,Fungi imperfecti ,Trametes hirsuta ,biology.organism_classification ,Galactomyces ,Applied Microbiology and Biotechnology ,Culture Media ,Microbiology ,melanin ,Aureobasidium pullulans ,decolorization ,Bjerkandera adusta ,Ascomycota ,Saccharomycetales ,Polyporales ,Mycelium ,Biotechnology ,Trametes versicolor - Abstract
A total of 17 fungi and four bacteria were screened for their ability to decolorize melanin, using isolated extracellular melanin of the bluestain fungus Aureobasidium pullulans as substrate. On agar media, decolorization was observed by four fungal strains: Bjerkandera adusta VTT-D-99746, Galactomyces geotrichum VTT-D-84228, Trametes hirsuta VTT-D-95443 and Trametes versicolor VTT-D-99747. The four fungi were more efficient on nitrogen-limited medium than on complete medium. The melanin-decolorizing activity of G. geotrichum appeared to be located on the mycelium and could be liberated into the medium enzymatically.
- Published
- 2001
34. Enzymatic oxidation of alkenes
- Author
-
M.-L Niku-Paavola and Liisa Viikari
- Subjects
chemistry.chemical_classification ,biology ,Alkene ,Process Chemistry and Technology ,Cyclohexene ,Hydroxybenzotriazole ,Substrate (chemistry) ,Bioengineering ,Ether ,Trametes hirsuta ,biology.organism_classification ,Biochemistry ,Catalysis ,Enzymatic catalysis ,chemistry.chemical_compound ,chemistry ,Alcohol oxidation ,Organic chemistry ,Oxidation of alkenes ,Mediated oxidation ,Laccase mediator system (LMS) - Abstract
Laccase (EC 1.10.3.2) from the white-rot fungus Trametes hirsuta was used to oxidize alkenes. The oxidation was the effect of a two-step process, in which the enzyme first catalyzed the oxidation of primary substrate, the mediator, and then the oxidized mediator oxidized the secondary substrate, the alkene. Three different mediators were studied in the oxidation of aliphatic and cyclic alkenes.All the alkenes tested were oxidized, but the degree of conversion depended on the alkene and mediator used. The mediators differed from each other in optimal reaction conditions and in specificity towards a given alkene. The best results were obtained by using hydroxybenzotriazole as mediator. Aliphatic polyunsaturated and aromatic allyl alcohols were completely oxidized within 2 h at 20°C. Aliphatic allyl alcohols were oxidized up to 70% at 45°C for 20 h, whereas a conversion of 60% was achieved in 5 h under oxygen atmosphere. By contrast, the oxidation degree of other alkenes, such as allyl ether, cis-2-heptene and cyclohexene, remained low with all the mediators and did not exceed 25%. The major oxidation products in all cases were the corresponding ketones or aldehydes.
- Published
- 2000
35. [Untitled]
- Author
-
Liisa Viikari, Maija Tenkanen, Johanna Buchert, Marja-Leena Niku-Paavola, Matti Siika-aho, and Anna Suurnäkki
- Subjects
chemistry.chemical_classification ,Materials science ,Polymers and Plastics ,biology ,Cellulase ,Cellulose binding ,biology.organism_classification ,chemistry.chemical_compound ,Hydrolysis ,Enzyme ,chemistry ,Biochemistry ,Enzymatic hydrolysis ,biology.protein ,Pulp (tooth) ,Organic chemistry ,Cellulose ,Trichoderma reesei - Abstract
The action of monocomponent Trichoderma reesei endoglucanases (EG I, EG II; EC 3.2.1.4) and cellobiohydrolases (CBH I, CBH II; EC 3.2.1.91) and their core proteins was compared using isolated celluloses and bleached chemical pulp. The presence of cellulose binding domain (CBD) in the intact enzymes did not affect their action against soluble substrates. In the case of insoluble isolated celluloses and the chemical pulp the presence of CBD enhanced the enzymatic hydrolysis of cellulose. The effect of CBD was more pronounced in the cellobiohydrolases, hydrolysing mainly crystalline cellulose, than in the endoglucanases which were more efficient in hydrolysing amorphous cellulose. The pulp properties measured, that is, viscosity and strength after PFI refining, were equally affected by the treatment with intact enzymes and corresponding core proteins, suggesting that the presence of CBD in intact cellulases affects mainly the cellulose hydrolysis level and less the mode of action of T. reesei cellulases in pulp. The better beatability of the bleached chemical pulp treated with intact endoglucanases than that treated with the corresponding core proteins suggests that the presence of CBD in endoglucanases could, however, result in beneficial effects on pulp properties.
- Published
- 2000
36. Treatment of recycled kraft pulps with Trichoderma reesei hemicellulases and cellulases
- Author
-
Johanna Buchert, Tarja Oksanen, Liisa Viikari, Jaakko Pere, and L Paavilainen
- Subjects
Paper ,Conservation of Natural Resources ,Softwood ,Glycoside Hydrolases ,Bioengineering ,Cellulase ,engineering.material ,Applied Microbiology and Biotechnology ,stomatognathic system ,Hemicellulase ,Ultimate tensile strength ,Mannosidases ,Recycling of kraft pulp ,Trichoderma reesei ,Trichoderma ,Pulp properties ,biology ,Chemistry ,business.industry ,Pulp (paper) ,beta-Mannosidase ,General Medicine ,Pulp and paper industry ,biology.organism_classification ,Biotechnology ,Enzymes ,Xylan Endo-1,3-beta-Xylosidase ,stomatognathic diseases ,Xylosidases ,Kraft process ,engineering ,biology.protein ,Xylanase ,business ,Kraft paper - Abstract
Effects of recycling ECF-bleached softwood kraft pulp on pulp properties were evaluated in the laboratory. The tensile strength, fiber flexibility and WRV lost during drying of the pulp were recovered by refining between the cycles which, however, resulted in deteriorated drainage properties. The recycled pulps were treated with purified Trichoderma reesei cellulases and hemicellulases and the changes in fiber properties due to enzymatic treatments were characterized. The endoglucanases (EG I and EG II) significantly improved pulp drainage already at low dosage levels, and EG II was found to be more effective at a given level of carbohydrate solubilization. Combining hemicellulases with the endoglucanase treatments increased the positive effects of the endoglucanases on pulp drainage. However, as a result of the endoglucanase treatments a slight loss in strength was observed. Combining mannanase with endoglucanase treatments appeared to increase this negative effect, whereas the impact of xylanase was not significant. Although the drainage properties of the pulps could be improved by selected enzymes, the water retention capacity of the dried hornified fibers could not be recovered by any of the enzymes tested.
- Published
- 2000
37. [Untitled]
- Author
-
Liisa Viikari, Merja Itävaara, and Matti Siika-aho
- Subjects
Environmental Engineering ,Materials science ,Polymers and Plastics ,biology ,Aspergillus niger ,Cellulase ,Biodegradation ,biology.organism_classification ,Cellulose acetate ,chemistry.chemical_compound ,chemistry ,Enzymatic hydrolysis ,Materials Chemistry ,biology.protein ,Organic chemistry ,Cellulose ,Trichoderma reesei ,Kraft paper - Abstract
The biodegradability of cellulose-based materials was compared in the standard Sturm test and by enzymatic hydrolysis. Trichoderma reesei culture filtrate, the purified enzymes endoglucanase I and II from T. reesei, and β-glucosidase from Aspergillus niger were used in the experiments. The unpurified Trichoderma reesei culture filtrate was found to contain a mixture of enzymes suitable for cellulose degradation. However, when purified enzymes were used the right balance of the individual enzymes was necessary. The addition of β-glucosidase enhanced the enzymatic hydrolysis of cellulose materials when both culture filtrate and purified enzymes were used. In the Sturm test the biodegradability of most of the cellulose materials exceeded 70% carbon dioxide generation, but, in contrast, the biodegradability of the highly substituted aminated cellulose and cellulose acetate was below 10%. The results concerning enzymatic hydrolysis and biodegradability were in good agreement for kraft paper, sausage casing, aminated cellulose, and cellulose acetate. However, diverging results were obtained with cotton fabric, probably as a result of its high crystallinity.
- Published
- 1999
38. Substrate specificities of Penicillium simplicissimum α-galactosidases
- Author
-
Elina Luonteri, Maija Tenkanen, and Liisa Viikari
- Subjects
Oligosaccharides ,Bioengineering ,Applied Microbiology and Biotechnology ,Biochemistry ,Substrate Specificity ,Stachyose ,Mannans ,chemistry.chemical_compound ,Hydrolysis ,Raffinose ,Mannosidases ,Melibiose ,chemistry.chemical_classification ,Alpha-galactosidase ,biology ,Penicillium ,beta-Mannosidase ,Galactose ,Substrate (chemistry) ,Oligosaccharide ,Wood ,Isoenzymes ,chemistry ,alpha-Galactosidase ,biology.protein ,Aspergillus niger ,Biotechnology - Abstract
The substrate specificities of three Penicillium simplicissimum α-galactosidases, AGLI, AGLII, and AGLIII, were determined by using various isolated galactose-containing oligosaccharides and polymeric galacto(gluco)mannans. AGLI released galactose from melibiose and raffinose-family oligosaccharides but the amount of galactose released was decreased from 96% to 35% by the increasing chain length of the substrate from raffinose to verbascose. It was able to release galactose linked to the nonreducing end and less efficiently to the internal residues of the galactomanno-oligomers. AGLI was able to hydrolyze 60–92% of galactose from polymeric galacto(gluco)mannans alone but its action was facilitated by mannanase and β-mannosidase. In addition, it was able to release about 10% of the galactose from softwood kraft pulp alone and about 22% in combination with mannanase. AGLII was highly specific toward small galactose-containing oligosaccharides in which the galactose is linked to the nonreducing end of the substrate. It released 90–100% of galactose present in melibiose, raffinose, stachyose, and verbascose; however, it was able to degrade polymeric substrates only in combination with mannanase and β-mannosidase. AGLIII had only low activity toward the oligomeric substrates tested. It was able to release some galactose from the polymeric galacto(gluco)mannans alone, but its action was clearly enhanced by the backbone degrading enzymes.
- Published
- 1998
39. [Untitled]
- Author
-
Liisa Viikari, T. Paakkari, Tapani Suortti, Johanna Buchert, and Leena Rahkamo
- Subjects
Chromatography ,Materials science ,Polymers and Plastics ,biology ,Pulp (paper) ,Cellulase ,engineering.material ,Alkali metal ,biology.organism_classification ,chemistry.chemical_compound ,Hydrolysis ,chemistry ,engineering ,biology.protein ,Solubility ,Cellulose ,Dissolving pulp ,Trichoderma reesei - Abstract
Dissolving pulp was solubilized in 9% NaOH, resulting in 32% solubilization of the pulp. Most of the pulp hemicelluloses were solubilized during this treatment. During the alkaline treatment the cellulose crystalline form was converted from cellulose I to cellulose II. The alkaline insoluble residue was further treated with cellulases in order to render it more alkaline soluble (two-step process). The cellulose II was readily hydrolysed by Trichoderma reesei endoglucanases. Considerably higher hydrolysis yields and lower viscosities were obtained in the hydrolysis of the alkaline insoluble residue as compared with the original pulp. Compared with direct enzymatic treatment with subsequent solubilization in alkali, the overall alkaline solubility of the two-step process was slightly higher at the same enzyme dosage. However, when compared at the same hydrolysis levels, slightly lower overall alkaline solubilities were obtained in the two-step method. 0969--0239 © 1998 Black ie Academic & Professional
- Published
- 1998
40. Impact of the Donnan effect on the action of xylanases on fibre substrates
- Author
-
Tarja Tamminen, Johanna Buchert, and Liisa Viikari
- Subjects
Metal hydroxide ,Pulp (paper) ,Inorganic chemistry ,Ionic bonding ,Bioengineering ,General Medicine ,engineering.material ,Applied Microbiology and Biotechnology ,chemistry.chemical_compound ,Kraft process ,chemistry ,Ionic strength ,engineering ,Xylanase ,Hydroxide ,Kraft paper ,Biotechnology - Abstract
Carboxylic acid bound to xylans in the fibre matrix cause a pH gradient between the fibre and the surrounding solution, known as the Donnan effect. The gradient is dependent on the ionic strength of the fibre solution. When meta1-free kraft pulp was used as a substrate for the Trichoderma reesei xylanase, the apparent pH optimum of the xylanase at low ionic strengths was found to be significantly higher, around 9, when a monovalent hydroxide was used for pH adjustment, as compared to the pH optimum obtained with a divalent metal hydroxide, i.e. pH 5–6. By increasing the ionic strength of the pulp solution by salt addition, the pH optimae of the xylanase became 5–6 with all the hydroxides. This difference was caused by the Donnan effect. Thus, at low ionic strengths the actual pH is lower than that measured in the solution, resulting in an increased apparent pH optimum of the xylanase. In practice, these results are important when applying xylanases on practical, fibre bound substrates, such as kraft pulps.
- Published
- 1997
41. The effect of oxidative pretreatment on cellulose degradation by Poria placenta and Trichoderma reesei cellulases
- Author
-
Marjaana Rättö, Liisa Viikari, and Anne-Christine Ritschkoff
- Subjects
inorganic chemicals ,Chromatography ,biology ,Chemistry ,fungi ,Substrate (chemistry) ,General Medicine ,Cellulase ,biology.organism_classification ,complex mixtures ,Applied Microbiology and Biotechnology ,chemistry.chemical_compound ,Hydrolysis ,Biochemistry ,Trichoderma ,Enzymatic hydrolysis ,biology.protein ,Cellulose ,Hydrogen peroxide ,Trichoderma reesei ,Biotechnology - Abstract
The possible role of hydrogen peroxide in brown-rot decay was investigated by studying the effects of pretreatment of spruce wood and microcrystalline Avicel cellulose with H2O2 and Fe2+ (Fenton's reagent) on the subsequent enzymatic hydrolysis of the substrates. A crude endoglucanase preparation from the brown-rot fungus Poria placenta, a purified endoglucanase from Trichoderma reesei and a commercial Trichoderma cellulase were used as enzymes. Avicel cellulose and spruce dust were depolymerized in the H2O2/Fe2+ treatment. Mainly hemicelluloses were lost in the treatment of spruce dust. The effect of the pretreatment on subsequent enzymatic hydrolysis was found to depend on the nature of the substrate and the enzyme preparation used. Pretreatment with H2O2/Fe2+ clearly increased the amount of enzymatic hydrolysis of spruce dust with both the endoglucanases and the commercial cellulase. In all cases the amount of hydrolysis was increased about threefold. The hydrolysis of Avicel with the endoglucanases was also enhanced, whereas the hydrolysis with the commercial cellulase was decreased.
- Published
- 1997
42. [Untitled]
- Author
-
Johanna Buchert, Maija Tenkanen, and Liisa Viikari
- Subjects
Chlorine dioxide ,Ozone ,Pulp and paper industry ,Applied Microbiology and Biotechnology ,Biochemistry ,Metal ,chemistry.chemical_compound ,chemistry ,visual_art ,Xylanase ,visual_art.visual_art_medium ,Chelation ,Kraft paper ,Acid tolerant ,Aspergillus kawachii - Abstract
A xylanase from Aspergillus kawachii, active at pH 2.0–2.5, was found to be suitable for improvement of bleachability. Due to the low working pH of the xylanase, the metal cations were also removed and thus the metal removal stage using chelating agents could be omitted. The use of acid-tolerant xylanase is especially beneficial prior to ozone or chlorine dioxide bleaching stages due to the minimization of pH adjustment steps during bleaching.
- Published
- 1997
43. [Untitled]
- Author
-
Jaakko Pere, Johanna Buchert, Liisa Viikari, and Tarja Oksanen
- Subjects
Materials science ,Polymers and Plastics ,biology ,Pulp (paper) ,Cellulase ,engineering.material ,biology.organism_classification ,chemistry.chemical_compound ,Hydrolysis ,stomatognathic system ,chemistry ,Kraft process ,Ultimate tensile strength ,Xylanase ,engineering ,biology.protein ,Food science ,Cellulose ,Composite material ,Trichoderma reesei - Abstract
Four purified cellulases, a xylanase and mannanase from Trichoderma reesei were used to treat never-dried bleached pine kraft pulp prior to refining, and the effects on pulp properties were evaluated. The enzymatic treatments hydrolysed up to 0.8% of pulp dry weight. The results demonstrated that the individual cellulases have profoundly different modes of action in modifying pulp carbohydrates. This is especially clear when comparing their effects at the same level of hydrolysis. Pretreatment with cellobiohydrolases I (CBH I) and II (CBH II) had virtually no effect on the development of pulp properties during refining, except for a slight decrease in strength properties. On the contrary, endoglucanase I (EG I) and endoglucanase II (EG II) improved the beatability of the pulp as measured by Schopper--Riegler value, sheet density and Gurley air resistance. Of the endoglucanases, EG II was most effective in improving the beating response. The combinations of CBH I with EG I and EG II had similar effects on the pulp properties as the endoglucanases alone, although the amount of hydrolysed cellulose was increased. Pretreatments with xylanase or mannanase did not appear to modify the pulp properties. The same enzyme treatments which improved the beatability, however, slightly impaired the pulp strength, especially tear index at the enzyme dosages used. When compared at a given level of cellulose hydrolysis, the negative effect of EG II on strength properties was more pronounced compared with EG I. Thus, the exploitation of cellulases for fibre treatments requires careful optimization of both enzyme composition and dosage. Since the endoglucanases had no positive effect on the development of tensile strength, it is suggested that the explanation for the increased beating response is increased fibre breakage and formation of fines, rather than improved flexibilization.
- Published
- 1997
44. The role of hemicelluloses in the hornification of bleached kraft pulps
- Author
-
Liisa Viikari, Tarja Oksanen, and Johanna Buchert
- Subjects
Pore size ,Materials science ,Pulp (paper) ,Glucomannan ,engineering.material ,Biomaterials ,chemistry.chemical_compound ,stomatognathic diseases ,chemistry ,stomatognathic system ,Ultimate tensile strength ,medicine ,Xylanase ,engineering ,Hemicellulose ,Swelling ,medicine.symptom ,Composite material ,Kraft paper - Abstract
During recycling of chemical pulps, deterioration of pulp properties occurs due to hornification. This phenomenon is caused by irreversible structural changes taking place during drying. In this work, the role of pulp hemicelluloses in the hornification process of kraft pulps produced by different cooking and bleaching methods was investigated. About 25-45 % of xylan or 30 % of glucomannan were selectively removed from pulps by xylanase and mannanase treatments, respectively. Subsequently, the pulps were dried and the effects of drying on the fiber properties such as water retention value (WRV), fiber stiffness, pore size distribution, sheet density and tensile strength were evaluated. Drying of the fibers resulted in hornification phenomenon which could be clearly observed as deteriorated fiber properties. A decrease of WRV, sheet density, tensile strength and total pore volume as well as an increase of fiber stiffness demonstrated the loss of swelling and bonding capacity. An extensive removal of pulp xylan or glucomannan had no negative effect on the properties of never-dried bleached kraft fibers. However, the changes caused by drying became even more significant after removal of xylan or glucomannan. Thus, the hemicelluloses located in the fiber pores and in the interfibrillar spaces seem to hinder the hornification of kraft pulps, suggesting that pulps with higher hemicellulose contents may have a lower tendency to hornify during recycling.
- Published
- 1997
45. Carbohydrate-binding modules (CBMs) revisited: reduced amount of water counterbalances the need for CBMs
- Author
-
Matti Siika-aho, Anikó Várnai, Liisa Viikari, and Department of Food and Nutrition
- Subjects
0106 biological sciences ,education ,Hydrolysis Yield ,Wheat Straw ,Cellulase ,Management, Monitoring, Policy and Law ,Lignin ,01 natural sciences ,Applied Microbiology and Biotechnology ,Alternative protein ,03 medical and health sciences ,chemistry.chemical_compound ,Data sequences ,010608 biotechnology ,Cellulose ,219 Environmental biotechnology ,030304 developmental biology ,0303 health sciences ,biology ,Renewable Energy, Sustainability and the Environment ,Research ,Carbohydrate ,Avicel ,General Energy ,Biochemistry ,chemistry ,biology.protein ,Biotechnology - Abstract
Background A vast number of organisms are known to produce structurally diversified cellulases capable of degrading cellulose, the most abundant biopolymer on earth. The generally accepted paradigm is that the carbohydrate-binding modules (CBMs) of cellulases are required for efficient saccharification of insoluble substrates. Based on sequence data, surprisingly more than 60% of the cellulases identified lack carbohydrate-binding modules or alternative protein structures linked to cellulases (dockerins). This finding poses the question about the role of the CBMs: why would most cellulases lack CBMs, if they are necessary for the efficient hydrolysis of cellulose? Results The advantage of CBMs, which increase the affinity of cellulases to substrates, was found to be diminished by reducing the amount of water in the hydrolytic system, which increases the probability of enzyme-substrate interaction. At low substrate concentration (1% w/w), CBMs were found to be more important in the catalytic performance of the cellobiohydrolases TrCel7A and TrCel6A of Trichoderma reesei as compared to that of the endoglucanases TrCel5A and TrCel7B. Increasing the substrate concentration while maintaining the enzyme-to-substrate ratio enhanced adsorption of TrCel7A, independent of the presence of the CBM. At 20% (w/w) substrate concentration, the hydrolytic performance of cellulases without CBMs caught up with that of cellulases with CBMs. This phenomenon was more noticeable on the lignin-containing pretreated wheat straw as compared to the cellulosic Avicel, presumably due to unproductive adsorption of enzymes to lignin. Conclusions Here we propose that the water content in the natural environments of carbohydrate-degrading organisms might have led to the evolution of various substrate-binding structures. In addition, some well recognized problems of economical saccharification such as unproductive binding of cellulases, which reduces the hydrolysis rate and prevents recycling of enzymes, could be partially overcome by omitting CBMs. This finding could help solve bottlenecks of enzymatic hydrolysis of lignocelluloses and speed up commercialization of second generation bioethanol.
- Published
- 2013
46. On the reactivity of the Melanocarpus albomyces laccase and formation of coniferyl alcohol dehydropolymer (DHP) in the presence of ionic liquid 1-allyl-3-methylimidazolium chloride
- Author
-
Pirkko Karhunen, Ilkka Kilpeläinen, Maarit Lahtinen, Liisa Viikari, Kristiina Kruus, and Janne Asikkala
- Subjects
lignin ,Bioengineering ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,Chloride ,Catalysis ,chemistry.chemical_compound ,two-dimensional nuclear magnetic resonance (2D NMR) ,medicine ,Organic chemistry ,Lignin ,Dehydropolymer (DHP) ,ionic liquid ,chemistry.chemical_classification ,Laccase ,010405 organic chemistry ,Process Chemistry and Technology ,Substrate (chemistry) ,Electron acceptor ,0104 chemical sciences ,enzyme ,chemistry ,Ionic liquid ,Coniferyl alcohol ,medicine.drug - Abstract
Some ionic liquids are able to dissolve wood, including lignin and lignocellulose, and thus they provide an efficient reaction media for modification of globally abundant wood-based polymers. Lignin can be modified with laccases (EC 1.10.3.2), multicopper oxidases, which selectively catalyze the oxidation of phenolic hydroxyl to the phenoxy radical in lignin by using oxygen as the co-substrate and an electron acceptor. Many enzymes, including laccases, retain their catalytic activity in the presence of ionic liquids. However, the enzyme activity is usually decreased in the presence of ionic liquids, and the most deactivating ionic liquids have been observed to be those dissolving wood most efficiently. In the present study the activity, pH optimum and catalyzed oxidation of coniferyl alcohol by the laccase from the ascomycete Melanocarpus albomyces was investigated in the ionic liquid 1-allyl-3-methyl-imidazolium chloride ([Amim]Cl), known to dissolve wood and expected to affect the laccase activity. Indeed, with an increasing concentration of [Amim]Cl, the activity of M. albomyces laccase decreased, and the pH range of the enzyme activity was narrowed. The pH optimum, using 2,6-dimethoxyphenol as the substrate, was shifted from 6.5 to 6.0 when the amount of [Amim]Cl was increased to 60% (m-%). It was also found that the inhibition of laccase with NaN 3 was not as severe in the ionic liquid as in water. The insoluble fraction of the dehydropolymer (DHP) formed in the presence of [Amim]Cl had clearly higher molecular weight compared to the one formed in water. DHPs formed in the absence and presence of [Amim]Cl both contained β -5, β – β , β - O -4, α -C O/ β - O -4 and α - O -4/ β - O -4 structures. However, in the presence of [Amim]Cl, less β - O -4, slightly less β -5 and more β – β structures were formed.
- Published
- 2013
47. Effect of temperature on lignin-derived inhibition studied with three structurally different cellobiohydrolases
- Author
-
Ulla Moilanen, Susanna Nurmi-Rantala, Liisa Viikari, Jenni Rahikainen, Kristiina Kruus, Anu Koivula, and Angelos A. Lappas
- Subjects
0106 biological sciences ,Time Factors ,01 natural sciences ,7. Clean energy ,chemistry.chemical_compound ,Catalytic Domain ,Organic chemistry ,Lignin ,Biomass ,Waste Management and Disposal ,Trichoderma reesei ,Triticum ,chemistry.chemical_classification ,Trichoderma ,0303 health sciences ,cellulase ,biology ,Hydrolysis ,Temperature ,food and beverages ,General Medicine ,Wood ,Biodegradation, Environmental ,Crystallization ,Environmental Engineering ,Carbohydrates ,Lignocellulosic biomass ,lignin ,Bioengineering ,Cellulase ,macromolecular substances ,complex mixtures ,03 medical and health sciences ,010608 biotechnology ,Enzymatic hydrolysis ,Cellulose 1,4-beta-Cellobiosidase ,Cellulose ,enzyme stability ,030304 developmental biology ,Renewable Energy, Sustainability and the Environment ,fungi ,technology, industry, and agriculture ,enzymatic hydrolysis ,biology.organism_classification ,Enzyme ,chemistry ,adsorption ,biology.protein - Abstract
Non-productive enzyme adsorption onto lignin inhibits enzymatic hydrolysis of lignocellulosic biomass. Three cellobiohydrolases, Trichoderma reesei Cel7A (TrCel7A) and two engineered fusion enzymes, with distinctive modular structures and temperature stabilities were employed to study the effect of temperature on inhibition arising from non-productive cellulase adsorption. The fusion enzymes, TeCel7A-CBM1 and TeCel7A-CBM3, were composed of a thermostable Talaromyces emersonii Cel7A (TeCel7A) catalytic domain fused to a carbohydrate-binding module (CBM) either from family 1 or from family 3. With all studied enzymes, increase in temperature was found to increase the inhibitory effect of supplemented lignin in the enzymatic hydrolysis of microcrystalline cellulose. However, for the different enzymes, lignin-derived inhibition emerged at different temperatures. Low binding onto lignin and thermostable structure were characteristic for the most lignin-tolerant enzyme, TeCel7A-CBM1, whereas TrCel7A was most susceptible to lignin especially at elevated temperature (55 °C).
- Published
- 2013
48. Characterization of Unbleached Kraft Pulps by Enzymatic Treatment, Potentiometric Titration and Polyelectrolyte Adsorption
- Author
-
Janne Laine, Liisa Viikari, Per Stenius, and Johanna Buchert
- Subjects
Softwood ,Pulp (paper) ,Uronic acid ,engineering.material ,Biomaterials ,stomatognathic diseases ,chemistry.chemical_compound ,stomatognathic system ,chemistry ,Kraft process ,Biochemistry ,engineering ,Hardwood ,Xylanase ,Lignin ,Kraft paper ,Nuclear chemistry - Abstract
The surface properties of unbleached softwood (Pinus sylvestris) and hardwood (Betula verrucosa) kraft pulps were modified by treating the fibre surfaces with specific xylanase and mannanase (Trichoderma reesei). The amounts and accessibilities of surface carboxyl groups in untreated and enzyme-treated fibres were analyzed using adsorption of cationic polyelectrolytes and high precision potentiometric titration. According to the potentiometric titration both softwood and hardwood pulps contained two types of acidic groups, one with pK 1 ≃ 3.3 (uronic acid in xylan) and one with pK 2 ≃ 5.5 (probably carboxylic group in lignin). The relative amount of the weaker acid in softwood and hardwood pulp was 10% and 20% of the total acid content, respectively. The ratio of the two acids in pulps was not changed by mannanase treatment, while xylanase treatment decreased the relative amount of the stronger acid. This indicates that the major part of the carboxylic groups are bound to xylan. Xylanase treatment removed about 30% of the xylan in both birch and pine pulps and, consequently, 22% of the acid groups in hardwood pulp but only 8% of the acid groups in softwood pulp. Hence, in softwood kraft pulp fibres the content of uronic acid side-groups in accessible xylan on the surfaces of the fibres is lower than that on the hardwood fibres.
- Published
- 1996
49. Surface Characterization of Unbleached Kraft Pulps by Enzymatic Peeling and ESCA
- Author
-
Göran Carlsson, Johanna Buchert, Liisa Viikari, and Gunnar Ström
- Subjects
biology ,Pulp (paper) ,fungi ,technology, industry, and agriculture ,food and beverages ,Glucomannan ,macromolecular substances ,engineering.material ,biology.organism_classification ,Pulp and paper industry ,complex mixtures ,Biomaterials ,chemistry.chemical_compound ,Kraft process ,chemistry ,Enzymatic hydrolysis ,engineering ,Xylanase ,Organic chemistry ,Lignin ,Trichoderma reesei ,Kraft paper - Abstract
Specific enzymes hydrolyzing pulp carbohydrates can be used for characterization of pulp fibres. By combining enzymatic peeling of fibre hemicelluloses with novel techniques of surface analysis, such as ESCA, new information can be obtained on the location of different components, i.e. xylan, glucomannan and lignin on the fibre surfaces. In this work unbleached kraft pulps were selectively peeled with purified Trichoderma reesei xylanase and mannanase and the structural modifications caused by the removal of the hemicelluloses were analyzed with ESCA. The removal of the accessible portion of the pine kraft xylan increased the amount of surface lignin, whereas mannan removal had no effect on the amount of lignin on the surface. In the case of birch kraft pulp the removal of accessible xylan did not enhance the amount of lignin on the surface. However, in birch kraft pulp the removal of xylan decreased the amount of extractives covering the surface.
- Published
- 1996
50. Thermostable laccases produced by a white-rot fungus from Peniophora species
- Author
-
Marja-Leena Niku-Paavola, Kristiina Kruus, Richard Fagerström, and Liisa Viikari
- Subjects
Gene isoform ,chemistry.chemical_classification ,Laccase ,Strain (chemistry) ,Molecular mass ,Peniophora ,biology ,Bioengineering ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Biochemistry ,Microbiology ,Enzyme ,chemistry ,Thermostability ,Peptide sequence ,Biotechnology - Abstract
A strain of Peniophora species was shown to produce laccase, which is a new feature for this species. Peniophora secreted several laccase isoforms with pI-values 3.7–4.2 when grown on glucose and soya meal medium. The Peniophora laccases were typical for Basidiomycetes with respect to pH-dependence, specific activity and inhibitors. The interesting exceptional feature of Peniophora laccases was their good thermostability. At 60 °C, the half-life of the isoforms in the culture filtrate was approximately 5 h and at 70 °C for 15 min. Also, the isolated main isoform with pI-value 4.1 and molecular mass 63 kDa was similarly thermostable. The N-terminal amino acid sequence, altogether 22 amino acid residues, of the separated isoform was 50–63% identical with those of the Basidiomycete laccases analyzed recently.
- Published
- 2004
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